MD07G1272000.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
33849040 .. 33852175
3136 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1272000.v1.1.491

Sequence Viewer

Length: 1695 bp
ATGGTCAAACTTTCGAGTTCCGACAATTTTGAAGCGATTCAGCGTTGGCCCTCCTCCTCCTCCTCCTCTATAAATACTCCCTCCATTCTCTTCTTATTACTCACAACTCACAAAAATATCAGCCTGCATATTACTACACACGTTAAGAAAGACAGAGAAATGGAGATCATCGTTCGATTTTTCATCATCGCCATCGTCATGGCGCTGCTGTACGTCTTTTGCAGTTTAATCTTTTCCTTCTGGGTTTTTCCAGTTCTTGCATATAGGAAGCTCAAGAAAAATGGGTTAGATGGTCCATCTCCAAGTTTTCCATTCGGAAATCTCAGTGAGATGAAAAAGGAGAACATCAATGTTAAAAGCTCAAGTATCTCCCATGACATACACTCGACCCTCTTTCCCTTTTTTGCTCGCTGGCAAAACTCTTTCGGAAAGATGTTCGTTTATTGGTTGGGGACGGAGCCATTTTTGTACATAGCAGATCCAGAGCTACTGAAAAAACTGTCTACGGAGGTGACAGCAAAGAACTGGGGGAAGCCTGCGGTGTTCCGACGCGATAGAGCGGCGATGTTCGGTAATGGCCTAGTCATGTCCGAAGGCGATGACTGGGCTCGTCACCGCCATGTTATCACTCCTGCTTTTAACCCAACAAACTTGAAGGCAATGGCGAGCTTAATGGTGGAGACCACCACCAAAATGCTAGACAATTGGACGACCCTCGTAGATTCCGGCACTCAAGAATTCGACGTCGAGAAAGAAGTCACAGCAACCGCTGGAGAGATCATCGCCAAAACCAGCTTTGGCATCAGCTACCAAAGTGGCCGGCTAGTGTTCGAAAAACTAAGAGCCTTGCAAACGACACTATTCAAAACGATCCGTTTCGTGGGAGTTCCTTTCGGGAAAATGATGCACCCTAAGAAAGCCCTAGAGGCCAGAAAACTTGGGCAAGAAATTAACCAATTGTTCTTGTCACTAATTGACGAAAGACGCAAAATGATCAGAGGGTCGGGGCCGCAGAACGACCTGCTTGGCTTGTTGCTTAAACAGAGTGAACATGGAGGGTTCACAAAGTCCTTAACTACAAAAGAAGTTGTGGATGAGTGCAAGACATTCTTCTTTGGAGGTCATGAGACAACTGCATTGGCAATCACATGGACAATGTTGCTCCTGGCCACCCACCAGGATTGGCAAGATCAGTTGAGAGAGGAGATTAGGGAAGTGGTCGGAGACAAAGAAATTGACGTGAACATGCTTTCTGGACTAAAGAAGATGGGATGGGTGATGAACGAAGTCTTGCGGCTATACCCTTCAGCACCAAATGCACAAAGGCAAGCCAAAGCCGACATTCAAGTGAGCCACGACCTGTCGATTCCGAGTGGAACAAACATGTGGATTGACATCGTCGGCATGCACCACGACCCGGCCCTGTGGGGCGACGACGTCAACGAGTTCAAGCCGGAGAGGTTCAAGGACAACATCCACGGGGGGTGCAAGCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGCATTGGTAGAAACTTGACTTTCTTGGAGTACAAGATAGTTCTAACCCTAATTCTATCTAGGTTTTCATTTACCATCTCTCCAACATACTGCCATTCCCCTTCTATTGTCCTATCTCTGAGACCTTCCGATGGCCTGCCTCTAGTACTCCAACCCCTCTAG

Protein Analysis

565

Amino Acids

63.9

Weight (kDa)

9.09

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 130 - 540 1e-81 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 747, 1440
Acc36I ACCTGC 1 cut(s) 1029
AccBSI CCGCTC 1 cut(s) 560
AccI GTMKAC 1 cut(s) 503
AccII CGCG 1 cut(s) 552
AciI CCGC 6 cut(s) 539, 560, 616, 768, 1010, 1294
AclWI GGATC 2 cut(s) 473, 865
AcoI YGGCCR 2 cut(s) 817, 1167
AcsI RAATTY 1 cut(s) 737
AcuI CTGAAG 1 cut(s) 1290
AcyI GRCGYC 2 cut(s) 744, 1437
AfaI GTAC 5 cut(s) 212, 470, 1505, 1565, 1680
AfiI CCNNNNNNNGG 3 cut(s) 880, 1417, 1664
AflIII ACRYGT 2 cut(s) 139, 1383
AgsI TTSAA 6 cut(s) 32, 655, 865, 1346, 1450, 1465
AjiI CACGTC 1 cut(s) 1240
AjnI CCWGG 2 cut(s) 1164, 1176
AluBI AGCT 6 cut(s) 271, 360, 487, 669, 795, 807
AluI AGCT 6 cut(s) 271, 360, 487, 669, 795, 807
Alw26I GTCTC 4 cut(s) 674, 1121, 1218, 1648
AlwI GGATC 2 cut(s) 473, 865
AoxI GGCC 8 cut(s) 47, 577, 817, 927, 1007, 1167, 1419, 1666
ApeKI GCWGC 1 cut(s) 205
ApoI RAATTY 1 cut(s) 737
Asp700I GAANNNNTTC 1 cut(s) 36
AspLEI GCGC 1 cut(s) 205
AspS9I GGNCC 4 cut(s) 48, 293, 1007, 1420
AsuC2I CCSGG 1 cut(s) 1418
AsuHPI GGTGA 3 cut(s) 523, 605, 1288
AsuII TTCGAA 1 cut(s) 831
AvaII GGWCC 1 cut(s) 293
BalI TGGCCA 1 cut(s) 1169
BanII GRGCYC 1 cut(s) 610
BbvI GCAGC 1 cut(s) 192
BccI CCATC 8 cut(s) 200, 284, 304, 1261, 1266, 1492, 1616, 1658
BciT130I CCWGG 2 cut(s) 1166, 1178
BclI TGATCA 1 cut(s) 993
BcnI CCSGG 1 cut(s) 1418
BcoDI GTCTC 4 cut(s) 674, 1121, 1218, 1648
BfaI CTAG 7 cut(s) 581, 698, 824, 923, 1593, 1676, 1693
BfoI RGCGCY 1 cut(s) 206
BfuAI ACCTGC 1 cut(s) 1029
BglI GCCNNNNNGGC 1 cut(s) 926
BisI GCNGC 4 cut(s) 206, 561, 1010, 1295
BlsI GCNGC 4 cut(s) 207, 562, 1011, 1296
BmcAI AGTACT 1 cut(s) 1680
Bme1390I CCNGG 3 cut(s) 1166, 1178, 1418
Bme18I GGWCC 1 cut(s) 293
BmgBI CACGTC 1 cut(s) 1240
BmgT120I GGNCC 4 cut(s) 48, 293, 1007, 1420
BmiI GGNNCC 2 cut(s) 459, 1008
BmrFI CCNGG 3 cut(s) 1166, 1178, 1418
BmrI ACTGGG 2 cut(s) 535, 613
BmsI GCATC 2 cut(s) 810, 894
BmuI ACTGGG 2 cut(s) 535, 613
BpmI CTGGAG 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 831
BpuEI CTTGAG 3 cut(s) 257, 346, 717
BpuMI CCSGG 1 cut(s) 1418
BsaBI GATNNNNATC 1 cut(s) 1394
BsaHI GRCGYC 2 cut(s) 744, 1437
BsaI GGTCTC 2 cut(s) 674, 1648
BsaJI CCNNGG 1 cut(s) 1477
BsaXI ACNNNNNCTCC 2 cut(s) 1597, 1627
Bsc4I CCNNNNNNNGG 3 cut(s) 880, 1417, 1664
Bse118I RCCGGY 1 cut(s) 819
Bse1I ACTGG 3 cut(s) 251, 530, 608
Bse3DI GCAATG 1 cut(s) 666
Bse8I GATNNNNATC 1 cut(s) 1394
BseBI CCWGG 2 cut(s) 1166, 1178
BseDI CCNNGG 1 cut(s) 1477
BseGI GGATG 3 cut(s) 1099, 1277, 1473
BseJI GATNNNNATC 1 cut(s) 1394
BseLI CCNNNNNNNGG 3 cut(s) 880, 1417, 1664
BseMI GCAATG 1 cut(s) 666
BseMII CTCAG 2 cut(s) 337, 1643
BseNI ACTGG 3 cut(s) 251, 530, 608
BseRI GAGGAG 6 cut(s) 43, 46, 49, 52, 55, 1217
BseXI GCAGC 1 cut(s) 192
Bsh1236I CGCG 1 cut(s) 552
BshFI GGCC 8 cut(s) 49, 579, 819, 929, 1009, 1169, 1421, 1668
BsiSI CCGG 4 cut(s) 726, 820, 1418, 1454
BslFI GGGAC 1 cut(s) 466
BslI CCNNNNNNNGG 3 cut(s) 880, 1417, 1664
BsmAI GTCTC 4 cut(s) 674, 1121, 1218, 1648
BsmFI GGGAC 1 cut(s) 466
BsnI GGCC 8 cut(s) 49, 579, 819, 929, 1009, 1169, 1421, 1668
Bso31I GGTCTC 2 cut(s) 674, 1648
Bsp119I TTCGAA 1 cut(s) 831
Bsp1286I GDGCHC 1 cut(s) 610
Bsp1407I TGTACA 1 cut(s) 468
Bsp143I GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
BspACI CCGC 6 cut(s) 539, 560, 616, 768, 1010, 1294
BspANI GGCC 8 cut(s) 49, 579, 819, 929, 1009, 1169, 1421, 1668
BspCNI CTCAG 2 cut(s) 336, 1644
BspFNI CGCG 1 cut(s) 552
BspHI TCATGA 1 cut(s) 1123
BspLI GGNNCC 2 cut(s) 459, 1008
BspMI ACCTGC 1 cut(s) 1029
BspPI GGATC 2 cut(s) 473, 865
BspT104I TTCGAA 1 cut(s) 831
BspTNI GGTCTC 2 cut(s) 674, 1648
BsrBI CCGCTC 1 cut(s) 560
BsrDI GCAATG 1 cut(s) 666
BsrFI RCCGGY 1 cut(s) 819
BsrGI TGTACA 1 cut(s) 468
BsrI ACTGG 3 cut(s) 251, 530, 608
BssAI RCCGGY 1 cut(s) 819
BssECI CCNNGG 1 cut(s) 1477
BssMI GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
BssNI GRCGYC 2 cut(s) 744, 1437
Bst2UI CCWGG 2 cut(s) 1166, 1178
Bst4CI ACNGT 1 cut(s) 501
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 2 cut(s) 744, 1437
BstAPI GCANNNNNTGC 1 cut(s) 1316
BstAUI TGTACA 1 cut(s) 468
BstBI TTCGAA 1 cut(s) 831
BstDEI CTNAG 4 cut(s) 323, 839, 912, 1652
BstDSI CCRYGG 1 cut(s) 1477
BstF5I GGATG 3 cut(s) 1099, 1277, 1473
BstFNI CGCG 1 cut(s) 552
BstH2I RGCGCY 1 cut(s) 206
BstHHI GCGC 1 cut(s) 205
BstKTI GATC 6 cut(s) 168, 481, 780, 873, 996, 1192
BstMAI GTCTC 4 cut(s) 674, 1121, 1218, 1648
BstMBI GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
BstMWI GCNNNNNNNGC 2 cut(s) 926, 1316
BstNI CCWGG 2 cut(s) 1166, 1178
BstNSI RCATGY 3 cut(s) 1249, 1387, 1408
BstSCI CCNGG 3 cut(s) 1164, 1176, 1416
BstUI CGCG 1 cut(s) 552
BstV1I GCAGC 1 cut(s) 192
BstX2I RGATCY 1 cut(s) 478
BstXI CCANNNNNNTGG 1 cut(s) 199
BstYI RGATCY 1 cut(s) 478
BsuRI GGCC 8 cut(s) 49, 579, 819, 929, 1009, 1169, 1421, 1668
BtgI CCRYGG 1 cut(s) 1477
BtgZI GCGATG 4 cut(s) 172, 578, 612, 766
BtrI CACGTC 1 cut(s) 1240
BtsCI GGATG 3 cut(s) 1099, 1277, 1473
BtsIMutI CAGTG 1 cut(s) 331
BveI ACCTGC 1 cut(s) 1029
CciI TCATGA 1 cut(s) 1123
CfoI GCGC 1 cut(s) 205
Cfr10I RCCGGY 1 cut(s) 819
Cfr13I GGNCC 4 cut(s) 48, 293, 1007, 1420
CseI GACGC 2 cut(s) 558, 993
Csp6I GTAC 5 cut(s) 211, 469, 1504, 1564, 1679
CspCI CAANNNNNGTGG 2 cut(s) 1163, 1198
CviQI GTAC 5 cut(s) 211, 469, 1504, 1564, 1679
DdeI CTNAG 4 cut(s) 323, 839, 912, 1652
DpnI GATC 6 cut(s) 167, 480, 779, 872, 995, 1191
DpnII GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
EaeI YGGCCR 2 cut(s) 817, 1167
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
Eco24I GRGCYC 1 cut(s) 610
Eco31I GGTCTC 2 cut(s) 674, 1648
Eco47I GGWCC 1 cut(s) 293
Eco57I CTGAAG 1 cut(s) 1290
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 1164, 1176
EcoT38I GRGCYC 1 cut(s) 610
FalI AAGNNNNNCTT 2 cut(s) 1094, 1126
FaqI GGGAC 1 cut(s) 466
FbaI TGATCA 1 cut(s) 993
FblI GTMKAC 1 cut(s) 503
Fnu4HI GCNGC 4 cut(s) 206, 561, 1010, 1295
FokI GGATG 3 cut(s) 1106, 1284, 1460
FriOI GRGCYC 1 cut(s) 610
Fsp4HI GCNGC 4 cut(s) 206, 561, 1010, 1295
FspBI CTAG 7 cut(s) 581, 698, 824, 923, 1593, 1676, 1693
GlaI GCGC 1 cut(s) 204
GluI GCNGC 4 cut(s) 206, 561, 1010, 1295
GsuI CTGGAG 1 cut(s) 792
HaeII RGCGCY 1 cut(s) 206
HaeIII GGCC 8 cut(s) 49, 579, 819, 929, 1009, 1169, 1421, 1668
HapII CCGG 4 cut(s) 726, 820, 1418, 1454
HgaI GACGC 2 cut(s) 558, 993
HhaI GCGC 1 cut(s) 205
Hin1I GRCGYC 2 cut(s) 744, 1437
Hin6I GCGC 1 cut(s) 203
HinP1I GCGC 1 cut(s) 203
HincII GTYRAC 1 cut(s) 1441
HindII GTYRAC 1 cut(s) 1441
HinfI GANTC 3 cut(s) 37, 722, 1366
HpaII CCGG 4 cut(s) 726, 820, 1418, 1454
HphI GGTGA 3 cut(s) 523, 605, 1288
Hpy166II GTNNAC 5 cut(s) 504, 1049, 1062, 1243, 1441
Hpy188III TCNNGA 7 cut(s) 274, 482, 734, 748, 895, 1124, 1254
Hpy8I GTNNAC 5 cut(s) 504, 1049, 1062, 1243, 1441
Hpy99I CGWCG 6 cut(s) 552, 746, 749, 1403, 1436, 1439
HpyAV CCTTC 6 cut(s) 247, 587, 649, 1314, 1644, 1668
HpyCH4III ACNGT 1 cut(s) 501
HpyCH4IV ACGT 5 cut(s) 141, 213, 744, 1239, 1437
HpyF10VI GCNNNNNNNGC 2 cut(s) 926, 1316
HpyF3I CTNAG 4 cut(s) 323, 839, 912, 1652
HpySE526I ACGT 5 cut(s) 141, 213, 744, 1239, 1437
Hsp92I GRCGYC 2 cut(s) 744, 1437
HspAI GCGC 1 cut(s) 203
KroI GCCGGC 1 cut(s) 819
KroNI GCCGGC 1 cut(s) 821
Ksp22I TGATCA 1 cut(s) 993
Kzo9I GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
LmnI GCTCC 2 cut(s) 457, 1167
Lsp1109I GCAGC 1 cut(s) 192
LweI GCATC 2 cut(s) 810, 894
MaeI CTAG 7 cut(s) 581, 698, 824, 923, 1593, 1676, 1693
MaeII ACGT 5 cut(s) 141, 213, 744, 1239, 1437
MaeIII GTNAC 4 cut(s) 511, 611, 757, 966
MalI GATC 6 cut(s) 167, 480, 779, 872, 995, 1191
MbiI CCGCTC 1 cut(s) 560
MboI GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
MboII GAAGA 3 cut(s) 82, 1102, 1276
MfeI CAATTG 2 cut(s) 703, 956
MflI RGATCY 1 cut(s) 478
MhlI GDGCHC 1 cut(s) 610
MlsI TGGCCA 1 cut(s) 1169
MluCI AATT 8 cut(s) 25, 703, 737, 948, 956, 972, 1233, 1584
MluNI TGGCCA 1 cut(s) 1169
MmeI TCCRAC 4 cut(s) 45, 571, 1201, 1640
Mox20I TGGCCA 1 cut(s) 1169
MroNI GCCGGC 1 cut(s) 819
MroXI GAANNNNTTC 1 cut(s) 36
MscI TGGCCA 1 cut(s) 1169
MseI TTAA 8 cut(s) 144, 227, 354, 639, 671, 951, 1038, 1073
MslI CAYNNNNRTG 4 cut(s) 197, 618, 692, 1346
Msp20I TGGCCA 1 cut(s) 1169
MspA1I CMGCKG 1 cut(s) 770
MspI CCGG 4 cut(s) 726, 820, 1418, 1454
MspR9I CCNGG 3 cut(s) 1166, 1178, 1418
MunI CAATTG 2 cut(s) 703, 956
MvaI CCWGG 2 cut(s) 1166, 1178
MvnI CGCG 1 cut(s) 552
MwoI GCNNNNNNNGC 2 cut(s) 926, 1316
NaeI GCCGGC 1 cut(s) 821
NciI CCSGG 1 cut(s) 1418
NdeII GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
NgoMIV GCCGGC 1 cut(s) 819
NlaIV GGNNCC 2 cut(s) 459, 1008
NmuCI GTSAC 4 cut(s) 511, 611, 757, 966
NspI RCATGY 3 cut(s) 1249, 1387, 1408
NspV TTCGAA 1 cut(s) 831
PaeI GCATGC 1 cut(s) 1408
PagI TCATGA 1 cut(s) 1123
PciI ACATGT 1 cut(s) 1383
PcsI WCGNNNNNNNCGW 1 cut(s) 1440
PdiI GCCGGC 1 cut(s) 821
PdmI GAANNNNTTC 1 cut(s) 36
PfeI GAWTC 3 cut(s) 37, 722, 1366
PflFI GACNNNGTC 2 cut(s) 1397, 1436
PkrI GCNGC 4 cut(s) 207, 562, 1011, 1296
PscI ACATGT 1 cut(s) 1383
Psp6I CCWGG 2 cut(s) 1164, 1176
PspGI CCWGG 2 cut(s) 1164, 1176
PspN4I GGNNCC 2 cut(s) 459, 1008
PspPI GGNCC 4 cut(s) 48, 293, 1007, 1420
PsuI RGATCY 1 cut(s) 478
PsyI GACNNNGTC 2 cut(s) 1397, 1436
RsaI GTAC 5 cut(s) 212, 470, 1505, 1565, 1680
RsaNI GTAC 5 cut(s) 211, 469, 1504, 1564, 1679
RseI CAYNNNNRTG 4 cut(s) 197, 618, 692, 1346
SaqAI TTAA 8 cut(s) 144, 227, 354, 639, 671, 951, 1038, 1073
SatI GCNGC 4 cut(s) 206, 561, 1010, 1295
Sau3AI GATC 6 cut(s) 165, 478, 777, 870, 993, 1189
Sau96I GGNCC 4 cut(s) 48, 293, 1007, 1420
ScaI AGTACT 1 cut(s) 1680
ScrFI CCNGG 3 cut(s) 1166, 1178, 1418
SduI GDGCHC 1 cut(s) 610
SfaNI GCATC 2 cut(s) 810, 894
SfuI TTCGAA 1 cut(s) 831
SinI GGWCC 1 cut(s) 293
SmiMI CAYNNNNRTG 4 cut(s) 197, 618, 692, 1346
SmlI CTYRAG 3 cut(s) 272, 361, 732
SmoI CTYRAG 3 cut(s) 272, 361, 732
SphI GCATGC 1 cut(s) 1408
Sse9I AATT 8 cut(s) 25, 703, 737, 948, 956, 972, 1233, 1584
SsiI CCGC 6 cut(s) 539, 560, 616, 768, 1010, 1294
SspMI CTAG 7 cut(s) 581, 698, 824, 923, 1593, 1676, 1693
StyD4I CCNGG 3 cut(s) 1164, 1176, 1416
TaaI ACNGT 1 cut(s) 501
TaiI ACGT 5 cut(s) 144, 216, 747, 1242, 1440
TaqI TCGA 7 cut(s) 14, 175, 386, 741, 747, 831, 1364
TasI AATT 8 cut(s) 25, 703, 737, 948, 956, 972, 1233, 1584
TatI WGTACW 3 cut(s) 468, 1563, 1678
TauI GCSGC 3 cut(s) 563, 1012, 1297
TfiI GAWTC 3 cut(s) 37, 722, 1366
Tru1I TTAA 8 cut(s) 144, 227, 354, 639, 671, 951, 1038, 1073
Tru9I TTAA 8 cut(s) 144, 227, 354, 639, 671, 951, 1038, 1073
TscAI CASTG 1 cut(s) 331
TseFI GTSAC 4 cut(s) 511, 611, 757, 966
TseI GCWGC 1 cut(s) 205
Tsp45I GTSAC 4 cut(s) 511, 611, 757, 966
TspDTI ATGAA 4 cut(s) 172, 347, 1295, 1590
TspGWI ACGGA 3 cut(s) 470, 521, 863
TspRI CASTG 1 cut(s) 331
Tth111I GACNNNGTC 2 cut(s) 1397, 1436
VpaK11BI GGWCC 1 cut(s) 293
XapI RAATTY 1 cut(s) 737
XceI RCATGY 3 cut(s) 1249, 1387, 1408
XmiI GTMKAC 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 7 cut(s) 581, 698, 824, 923, 1593, 1676, 1693
ZraI GACGTC 2 cut(s) 745, 1438
ZrmI AGTACT 1 cut(s) 1680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.