pycom01g21190

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
19351722 .. 19354800
3079 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g21190.3

Sequence Viewer

Length: 1509 bp
ATGGAGACCATTGTTCTAGGTTTTGTCATCGCCATCGTCATGGCACTTCTGTATGTTTTCTGCAGATTAATATTTTCCTTCTGGGTTTTTCCAGTTCTTGCGTCCAGGAAGCTCAAGAGAAATGGGTTGAACGGTCCATCTCCAACGATCAATGTTCAAAGTTCAAATATCTCCCATGACATACACTCAACTCTTTTTCCTTTTTTTACTCGCTGGCAAAACTCTTTCGGTAAGAAAGATGTTCGTTTATTGGTTGGGGACGGAGCCATTTTTGTACATAGCAGATCCAGCAAGCTACTGAAAAAACTGTCTACGGAGGTGACAGCAAAGAACTGGGGGAAGCCTGCGGTGTTCCGACGCGATACTCTGGGATCCCCGATGTTTGGTAATGGCCTACTCATGTCCGAAGGCGATGACTGGGTCCGTCACCGCCATGTTATCACTCCTGCTTTTAACCCAACAAACTTGAAGGCAATGGCGAGCGTAATGGTGGAGACCACCAACAAAATGCTAGACAACTGGGTGACTCTCATAGATTCCGGAACTCAAGAAATCGACGTCGAGAGAGAAATCATAACAACCGCCGGAGAAATCATCGCCAAGACCAGCTTTGGCATCAGCGACCAAAGTGGCCGCCCAGTGTTTGAAAAACTAAGGGCCTTGCAAATGACACTCTTCAAAACGGTTCGTTTTGTGGGAGTTCCTTTCGGAAAAATGTTGCACCCTAAGAAAACCCTAGAGGCCAGAAAACTTGGGCAAGAAATTAACCAATTGTTCTTGTCACTCATTGACGAAAGGCGAAAATCCATCAGAGGGTCGACGCCGCAGCACGACCTGCTTGGCTTGTTGCTTAAACAGAGTGAACAAGGAGGCTTCACAAAGTCCTTAACCACACAAGAACTAGTGGATGAGTGCAAGACATTTTTCTTTGGAGGTCATGAGACAACTGCATTGGCAATCACATGGACAATGTTGCTTCTGGCCACCCACCAGGATTGGCAACATCAGTTGAGAGAGGAGATTAGGGAAGTGTTCGGAGATAAAGGAATTGATGTGAACATGCTTTCTGGACTAAAGAAGATGGGATGGGTGATGAATGAAGTTTTCCGACTGTACCCTTCGGCACCAAATGCACAAAGGCAAGCCAAAGCCGACATTCAAGTGAGCAATGACTTGTCCATTCCTAGGGGAACCAATATGTGGATTGACATCGTCGGCATGCACCACGACCCGGCCCTGTGGGGCGAGGACGTCAACGAGTTCAAGCCGGAGAGGTTCAAGGACGACATCCACGGTGGGTGCAAGCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGCATTGGTAGAAACTTGACGTTCTTGGAGTATAAGATAGTTCTAACCCTAATTCTAACTAGGTTTTCTTTTAACATCTCTCCCACTTATTGCCACTCCCCTTCTATTGTGCTCTCTCTGAGGCCTTCCGATGGCCTGCCGCTAGTACTTCAGCCCCTCTAA

Protein Analysis

503

Amino Acids

56.7

Weight (kDa)

9.34

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 561, 1254
Acc36I ACCTGC 1 cut(s) 843
AccB1I GGYRCC 1 cut(s) 1123
AccB7I CCANNNNNTGG 1 cut(s) 1200
AccI GTMKAC 2 cut(s) 311, 818
AccII CGCG 1 cut(s) 360
AccIII TCCGGA 1 cut(s) 539
AciI CCGC 6 cut(s) 347, 430, 582, 634, 824, 1487
AclWI GGATC 3 cut(s) 279, 366, 379
AcoI YGGCCR 2 cut(s) 631, 981
AcuI CTGAAG 1 cut(s) 1481
AcyI GRCGYC 3 cut(s) 558, 821, 1251
AfaI GTAC 4 cut(s) 276, 1115, 1319, 1494
AfiI CCNNNNNNNGG 6 cut(s) 383, 813, 1185, 1200, 1231, 1478
AgsI TTSAA 9 cut(s) 130, 158, 165, 469, 647, 679, 1160, 1264, 1279
AhlI ACTAGT 1 cut(s) 901
AjnI CCWGG 2 cut(s) 104, 990
AluBI AGCT 3 cut(s) 112, 295, 609
AluI AGCT 3 cut(s) 112, 295, 609
Alw21I GWGCWC 1 cut(s) 1461
Alw26I GTCTC 2 cut(s) 488, 935
AlwI GGATC 3 cut(s) 279, 366, 379
Aor13HI TCCGGA 1 cut(s) 539
AoxI GGCC 8 cut(s) 391, 631, 657, 741, 981, 1233, 1469, 1480
ApeKI GCWGC 1 cut(s) 826
AseI ATTAAT 1 cut(s) 68
AspA2I CCTAGG 1 cut(s) 1184
AspS9I GGNCC 4 cut(s) 134, 421, 657, 1234
AsuC2I CCSGG 1 cut(s) 1232
AsuHPI GGTGA 4 cut(s) 331, 419, 535, 1102
AvaII GGWCC 2 cut(s) 134, 421
AvrII CCTAGG 1 cut(s) 1184
BalI TGGCCA 1 cut(s) 983
BamHI GGATCC 1 cut(s) 371
BanI GGYRCC 1 cut(s) 1123
Bbv12I GWGCWC 1 cut(s) 1461
BbvI GCAGC 1 cut(s) 838
BccI CCATC 7 cut(s) 41, 145, 815, 1075, 1080, 1306, 1472
BciT130I CCWGG 2 cut(s) 106, 992
BcnI CCSGG 1 cut(s) 1232
BcoDI GTCTC 2 cut(s) 488, 935
BcuI ACTAGT 1 cut(s) 901
BfaI CTAG 7 cut(s) 17, 512, 737, 902, 1185, 1407, 1490
BfmI CTRYAG 1 cut(s) 61
BfuAI ACCTGC 1 cut(s) 843
BisI GCNGC 4 cut(s) 634, 824, 827, 1487
BlnI CCTAGG 1 cut(s) 1184
BlsI GCNGC 4 cut(s) 635, 825, 828, 1488
BmcAI AGTACT 1 cut(s) 1494
Bme1390I CCNGG 3 cut(s) 106, 992, 1232
Bme18I GGWCC 2 cut(s) 134, 421
BmgT120I GGNCC 4 cut(s) 134, 421, 657, 1234
BmiI GGNNCC 5 cut(s) 265, 373, 422, 1125, 1192
BmrFI CCNGG 3 cut(s) 106, 992, 1232
BmrI ACTGGG 4 cut(s) 343, 427, 529, 632
BmsI GCATC 1 cut(s) 624
BmuI ACTGGG 4 cut(s) 343, 427, 529, 632
BpuEI CTTGAG 2 cut(s) 98, 531
BpuMI CCSGG 1 cut(s) 1232
BsaBI GATNNNNATC 1 cut(s) 1208
BsaHI GRCGYC 3 cut(s) 558, 821, 1251
BsaI GGTCTC 1 cut(s) 488
BsaJI CCNNGG 2 cut(s) 1184, 1291
BsaWI WCCGGW 1 cut(s) 539
Bsc4I CCNNNNNNNGG 6 cut(s) 383, 813, 1185, 1200, 1231, 1478
Bse1I ACTGG 5 cut(s) 92, 338, 422, 524, 638
Bse3DI GCAATG 2 cut(s) 480, 1174
Bse8I GATNNNNATC 1 cut(s) 1208
BseAI TCCGGA 1 cut(s) 539
BseBI CCWGG 2 cut(s) 106, 992
BseDI CCNNGG 2 cut(s) 1184, 1291
BseGI GGATG 3 cut(s) 913, 1091, 1287
BseJI GATNNNNATC 1 cut(s) 1208
BseLI CCNNNNNNNGG 6 cut(s) 383, 813, 1185, 1200, 1231, 1478
BseMI GCAATG 2 cut(s) 480, 1174
BseMII CTCAG 1 cut(s) 1457
BseNI ACTGG 5 cut(s) 92, 338, 422, 524, 638
BseRI GAGGAG 1 cut(s) 1031
BseXI GCAGC 1 cut(s) 838
Bsh1236I CGCG 1 cut(s) 360
BshFI GGCC 8 cut(s) 393, 633, 659, 743, 983, 1235, 1471, 1482
BshNI GGYRCC 1 cut(s) 1123
BsiHKAI GWGCWC 1 cut(s) 1461
BsiSI CCGG 4 cut(s) 540, 585, 1232, 1268
BslFI GGGAC 1 cut(s) 272
BslI CCNNNNNNNGG 6 cut(s) 383, 813, 1185, 1200, 1231, 1478
BsmAI GTCTC 2 cut(s) 488, 935
BsmFI GGGAC 1 cut(s) 272
BsnI GGCC 8 cut(s) 393, 633, 659, 743, 983, 1235, 1471, 1482
Bso31I GGTCTC 1 cut(s) 488
Bsp1286I GDGCHC 1 cut(s) 1461
Bsp13I TCCGGA 1 cut(s) 539
Bsp1407I TGTACA 1 cut(s) 274
Bsp143I GATC 3 cut(s) 147, 284, 371
BspACI CCGC 6 cut(s) 347, 430, 582, 634, 824, 1487
BspANI GGCC 8 cut(s) 393, 633, 659, 743, 983, 1235, 1471, 1482
BspCNI CTCAG 1 cut(s) 1458
BspEI TCCGGA 1 cut(s) 539
BspFNI CGCG 1 cut(s) 360
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 5 cut(s) 265, 373, 422, 1125, 1192
BspMAI CTGCAG 1 cut(s) 65
BspMI ACCTGC 1 cut(s) 843
BspPI GGATC 3 cut(s) 279, 366, 379
BspT107I GGYRCC 1 cut(s) 1123
BspTNI GGTCTC 1 cut(s) 488
BsrDI GCAATG 2 cut(s) 480, 1174
BsrGI TGTACA 1 cut(s) 274
BsrI ACTGG 5 cut(s) 92, 338, 422, 524, 638
BssECI CCNNGG 2 cut(s) 1184, 1291
BssMI GATC 3 cut(s) 147, 284, 371
BssNI GRCGYC 3 cut(s) 558, 821, 1251
BssT1I CCWWGG 1 cut(s) 1184
Bst2UI CCWGG 2 cut(s) 106, 992
Bst4CI ACNGT 5 cut(s) 134, 309, 685, 1113, 1295
Bst6I CTCTTC 1 cut(s) 680
BstACI GRCGYC 3 cut(s) 558, 821, 1251
BstAPI GCANNNNNTGC 2 cut(s) 835, 1130
BstAUI TGTACA 1 cut(s) 274
BstC8I GCNNGC 8 cut(s) 215, 293, 345, 481, 1143, 1220, 1304, 1484
BstDEI CTNAG 3 cut(s) 653, 726, 1466
BstDSI CCRYGG 1 cut(s) 1291
BstF5I GGATG 3 cut(s) 913, 1091, 1287
BstFNI CGCG 1 cut(s) 360
BstKTI GATC 3 cut(s) 150, 287, 374
BstMAI GTCTC 2 cut(s) 488, 935
BstMBI GATC 3 cut(s) 147, 284, 371
BstMWI GCNNNNNNNGC 3 cut(s) 288, 835, 1130
BstNI CCWGG 2 cut(s) 106, 992
BstNSI RCATGY 2 cut(s) 1063, 1222
BstSCI CCNGG 3 cut(s) 104, 990, 1230
BstSFI CTRYAG 1 cut(s) 61
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 838
BstX2I RGATCY 2 cut(s) 284, 371
BstXI CCANNNNNNTGG 1 cut(s) 40
BstYI RGATCY 2 cut(s) 284, 371
BsuRI GGCC 8 cut(s) 393, 633, 659, 743, 983, 1235, 1471, 1482
BtgI CCRYGG 1 cut(s) 1291
BtgZI GCGATG 3 cut(s) 13, 426, 580
BtsCI GGATG 3 cut(s) 913, 1091, 1287
BtsIMutI CAGTG 1 cut(s) 645
BveI ACCTGC 1 cut(s) 843
Cac8I GCNNGC 8 cut(s) 215, 293, 345, 481, 1143, 1220, 1304, 1484
CciI TCATGA 1 cut(s) 937
Cfr13I GGNCC 4 cut(s) 134, 421, 657, 1234
CseI GACGC 3 cut(s) 90, 366, 829
Csp6I GTAC 4 cut(s) 275, 1114, 1318, 1493
CspCI CAANNNNNGTGG 2 cut(s) 977, 1012
CviAII CATG 8 cut(s) 40, 176, 400, 434, 938, 963, 1060, 1219
CviQI GTAC 4 cut(s) 275, 1114, 1318, 1493
DdeI CTNAG 3 cut(s) 653, 726, 1466
DpnI GATC 3 cut(s) 149, 286, 373
DpnII GATC 3 cut(s) 147, 284, 371
EaeI YGGCCR 2 cut(s) 631, 981
Eam1104I CTCTTC 1 cut(s) 680
EarI CTCTTC 1 cut(s) 680
Eco130I CCWWGG 1 cut(s) 1184
Eco147I AGGCCT 1 cut(s) 1471
Eco31I GGTCTC 1 cut(s) 488
Eco47I GGWCC 2 cut(s) 134, 421
Eco57I CTGAAG 1 cut(s) 1481
EcoO109I RGGNCCY 1 cut(s) 657
EcoRII CCWGG 2 cut(s) 104, 990
EcoT14I CCWWGG 1 cut(s) 1184
ErhI CCWWGG 1 cut(s) 1184
FaeI CATG 8 cut(s) 43, 179, 403, 437, 941, 966, 1063, 1222
FalI AAGNNNNNCTT 2 cut(s) 593, 625
FaqI GGGAC 1 cut(s) 272
FatI CATG 8 cut(s) 39, 175, 399, 433, 937, 962, 1059, 1218
FblI GTMKAC 2 cut(s) 311, 818
Fnu4HI GCNGC 4 cut(s) 634, 824, 827, 1487
FokI GGATG 3 cut(s) 920, 1098, 1274
Fsp4HI GCNGC 4 cut(s) 634, 824, 827, 1487
FspBI CTAG 7 cut(s) 17, 512, 737, 902, 1185, 1407, 1490
GluI GCNGC 4 cut(s) 634, 824, 827, 1487
HaeIII GGCC 8 cut(s) 393, 633, 659, 743, 983, 1235, 1471, 1482
HapII CCGG 4 cut(s) 540, 585, 1232, 1268
HgaI GACGC 3 cut(s) 90, 366, 829
Hin1I GRCGYC 3 cut(s) 558, 821, 1251
Hin1II CATG 8 cut(s) 43, 179, 403, 437, 941, 966, 1063, 1222
HincII GTYRAC 2 cut(s) 819, 1255
HindII GTYRAC 2 cut(s) 819, 1255
HinfI GANTC 2 cut(s) 526, 536
HpaII CCGG 4 cut(s) 540, 585, 1232, 1268
HphI GGTGA 4 cut(s) 331, 419, 535, 1102
Hpy166II GTNNAC 5 cut(s) 312, 819, 863, 1057, 1255
Hpy188I TCNGA 8 cut(s) 356, 406, 710, 812, 1037, 1109, 1467, 1477
Hpy188III TCNNGA 6 cut(s) 115, 540, 548, 562, 938, 1068
Hpy8I GTNNAC 5 cut(s) 312, 819, 863, 1057, 1255
Hpy99I CGWCG 5 cut(s) 360, 560, 563, 823, 1217
HpyAV CCTTC 6 cut(s) 88, 401, 463, 1128, 1458, 1482
HpyCH4III ACNGT 5 cut(s) 134, 309, 685, 1113, 1295
HpyCH4IV ACGT 3 cut(s) 558, 1251, 1367
HpyCH4V TGCA 9 cut(s) 63, 664, 721, 915, 950, 1133, 1222, 1302, 1350
HpyF10VI GCNNNNNNNGC 3 cut(s) 288, 835, 1130
HpyF3I CTNAG 3 cut(s) 653, 726, 1466
HpySE526I ACGT 3 cut(s) 558, 1251, 1367
Hsp92I GRCGYC 3 cut(s) 558, 821, 1251
Hsp92II CATG 8 cut(s) 43, 179, 403, 437, 941, 966, 1063, 1222
Kpn2I TCCGGA 1 cut(s) 539
Kzo9I GATC 3 cut(s) 147, 284, 371
LmnI GCTCC 1 cut(s) 263
Lsp1109I GCAGC 1 cut(s) 838
LweI GCATC 1 cut(s) 624
MaeI CTAG 7 cut(s) 17, 512, 737, 902, 1185, 1407, 1490
MaeII ACGT 3 cut(s) 558, 1251, 1367
MaeIII GTNAC 4 cut(s) 319, 425, 523, 780
MalI GATC 3 cut(s) 149, 286, 373
MboI GATC 3 cut(s) 147, 284, 371
MboII GAAGA 2 cut(s) 667, 1090
MfeI CAATTG 1 cut(s) 770
MflI RGATCY 2 cut(s) 284, 371
MhlI GDGCHC 1 cut(s) 1461
MlsI TGGCCA 1 cut(s) 983
MluCI AATT 4 cut(s) 762, 770, 1047, 1398
MluNI TGGCCA 1 cut(s) 983
MlyI GAGTC 1 cut(s) 520
MmeI TCCRAC 3 cut(s) 167, 379, 1132
Mox20I TGGCCA 1 cut(s) 983
MroI TCCGGA 1 cut(s) 539
MscI TGGCCA 1 cut(s) 983
MseI TTAA 6 cut(s) 68, 453, 765, 852, 887, 1419
MslI CAYNNNNRTG 3 cut(s) 38, 432, 1160
Msp20I TGGCCA 1 cut(s) 983
MspI CCGG 4 cut(s) 540, 585, 1232, 1268
MspR9I CCNGG 3 cut(s) 106, 992, 1232
MunI CAATTG 1 cut(s) 770
MvaI CCWGG 2 cut(s) 106, 992
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 3 cut(s) 288, 835, 1130
NciI CCSGG 1 cut(s) 1232
NdeII GATC 3 cut(s) 147, 284, 371
NlaIII CATG 8 cut(s) 43, 179, 403, 437, 941, 966, 1063, 1222
NlaIV GGNNCC 5 cut(s) 265, 373, 422, 1125, 1192
NmuCI GTSAC 4 cut(s) 319, 425, 523, 780
NspI RCATGY 2 cut(s) 1063, 1222
PaeI GCATGC 1 cut(s) 1222
PagI TCATGA 1 cut(s) 937
PceI AGGCCT 1 cut(s) 1471
PfeI GAWTC 1 cut(s) 536
PflFI GACNNNGTC 2 cut(s) 419, 1211
PflMI CCANNNNNTGG 1 cut(s) 1200
PfoI TCCNGGA 1 cut(s) 104
PkrI GCNGC 4 cut(s) 635, 825, 828, 1488
PleI GAGTC 1 cut(s) 520
PpsI GAGTC 1 cut(s) 520
PshBI ATTAAT 1 cut(s) 68
Psp6I CCWGG 2 cut(s) 104, 990
PspGI CCWGG 2 cut(s) 104, 990
PspN4I GGNNCC 5 cut(s) 265, 373, 422, 1125, 1192
PspPI GGNCC 4 cut(s) 134, 421, 657, 1234
PstI CTGCAG 1 cut(s) 65
PsuI RGATCY 2 cut(s) 284, 371
PsyI GACNNNGTC 2 cut(s) 419, 1211
RsaI GTAC 4 cut(s) 276, 1115, 1319, 1494
RsaNI GTAC 4 cut(s) 275, 1114, 1318, 1493
RseI CAYNNNNRTG 3 cut(s) 38, 432, 1160
SalI GTCGAC 1 cut(s) 817
SaqAI TTAA 6 cut(s) 68, 453, 765, 852, 887, 1419
SatI GCNGC 4 cut(s) 634, 824, 827, 1487
Sau3AI GATC 3 cut(s) 147, 284, 371
Sau96I GGNCC 4 cut(s) 134, 421, 657, 1234
ScaI AGTACT 1 cut(s) 1494
SchI GAGTC 1 cut(s) 520
ScrFI CCNGG 3 cut(s) 106, 992, 1232
SduI GDGCHC 1 cut(s) 1461
SfaNI GCATC 1 cut(s) 624
SfcI CTRYAG 1 cut(s) 61
SinI GGWCC 2 cut(s) 134, 421
SmiMI CAYNNNNRTG 3 cut(s) 38, 432, 1160
SmlI CTYRAG 2 cut(s) 113, 546
SmoI CTYRAG 2 cut(s) 113, 546
SpeI ACTAGT 1 cut(s) 901
SphI GCATGC 1 cut(s) 1222
Sse9I AATT 4 cut(s) 762, 770, 1047, 1398
SseBI AGGCCT 1 cut(s) 1471
SsiI CCGC 6 cut(s) 347, 430, 582, 634, 824, 1487
SspI AATATT 1 cut(s) 72
SspMI CTAG 7 cut(s) 17, 512, 737, 902, 1185, 1407, 1490
StuI AGGCCT 1 cut(s) 1471
StyD4I CCNGG 3 cut(s) 104, 990, 1230
StyI CCWWGG 1 cut(s) 1184
TaaI ACNGT 5 cut(s) 134, 309, 685, 1113, 1295
TaiI ACGT 3 cut(s) 561, 1254, 1370
TaqI TCGA 3 cut(s) 555, 561, 818
TasI AATT 4 cut(s) 762, 770, 1047, 1398
TatI WGTACW 2 cut(s) 274, 1492
TauI GCSGC 3 cut(s) 636, 826, 1489
TfiI GAWTC 1 cut(s) 536
Tru1I TTAA 6 cut(s) 68, 453, 765, 852, 887, 1419
Tru9I TTAA 6 cut(s) 68, 453, 765, 852, 887, 1419
TscAI CASTG 1 cut(s) 645
TseFI GTSAC 4 cut(s) 319, 425, 523, 780
TseI GCWGC 1 cut(s) 826
Tsp45I GTSAC 4 cut(s) 319, 425, 523, 780
TspDTI ATGAA 2 cut(s) 1109, 1113
TspGWI ACGGA 3 cut(s) 276, 329, 413
TspRI CASTG 1 cut(s) 645
Tth111I GACNNNGTC 2 cut(s) 419, 1211
Van91I CCANNNNNTGG 1 cut(s) 1200
VpaK11BI GGWCC 2 cut(s) 134, 421
VspI ATTAAT 1 cut(s) 68
XceI RCATGY 2 cut(s) 1063, 1222
XmaJI CCTAGG 1 cut(s) 1184
XmiI GTMKAC 2 cut(s) 311, 818
XspI CTAG 7 cut(s) 17, 512, 737, 902, 1185, 1407, 1490
ZraI GACGTC 2 cut(s) 559, 1252
ZrmI AGTACT 1 cut(s) 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.