Rh1AG429100

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
65654065 .. 65656367
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG429100.1

Sequence Viewer

Length: 1296 bp
ATGGAGCACATGGCCATGGCAGTGATATTCTTCTTCTTCATCATTCTCTACTTATTATGCAGGCTGTCCCTTTCTTGTTGGGTTTTTCCTTTCCTAACTCACCGGAGGCTCAAGAAAAATGGTTTGACTGGCCCATCTCCAAGTTTTCCATTAGGAAACCTCAGTGAGATGAAGAAGAAGACTAACACTGGAAGCTCTTCTTGCACTAATAGTATATCCCATGACATATACTCAACTCTATTCCCTCACTTTGCTCGTTGGAGGAATTCCCACGGCAAGGTGTTCGTATACTGGTTGGGAACAGAGCCATTTTTGTACATAGCAGATCCTGTTTTAGTGAAAAAACTATCAACTCAGAGCTCCCATGTTTGGCAATGGCCTCATTGGCTCATTATGTCTGAAGGTGATAAATGGGCTCTTCACCGCCAAGTTATCACTCCTGCGTTTAACCCTACCAACTTGAAGGCAATGGTGAGTTTGATGGTGGAGACTACCAGAACAATGCTAGACACCTGGACTACCCAGCTCAGAAATTCCGGCACTCGAGAAATTGATGTAGAGAAATCAATCAGAGAAACAGCAGGGGAGATCATCGCCAAGGCCAGCTTTGGCATTAGTTACCAAAGTGATCACCATGTGTTTGAAAAATTTAGGGCCCTGCAAATCAGCCTCTTCCAAACAAAACGCCTTTTGGGAGTTCCATTTGGGAAATTCTTGTACCTCAAGCAAGCCCTCGAGGCCAGCAGACTTGGAAAAGAAATTAACCAACTGTTCTCATCGATCATAGCTGCACGAAAGAAAGCCATTAGGTCAGGATCGTCTACTATGCAGCACGACTTGCTTGGGTTATTGCTTAACCAGAGTGATCAACAAGGCAGCTTCAGAAAGGCTTTGACAACACAGCAGTTGGTGGATGAGTGCAAGACATTTTTCTTTTCAGGCCATGAGACATCGGCATTGTCTATCATATGGACGATGCTCCTTCTGGCCACGAATCCGGAGTGGCAAAATGAACTGAGGGAAGAGATTAGGGAGGTGGTAGGAGATAATAAAGAACTTCATTTCAACATGCTTGCTGGACTAAAGAAGATGGGATGGGTCATGAATGAGGTGTTCCGATTATATCCTTCAGGACCAAATGCACAGAGGCAAGCTAAAGATGACATTCGAGTTTTCTTTTACTATGTCTCCTACATATTGTCACTGCCCTTCAACTTTACTCACTATGAGGCCATCACTTTACTCACTATGAGGCCATCTTATGGTCTGCCTCTAGTATTCCAGCCCTTGGACTGA

Protein Analysis

431

Amino Acids

49.63

Weight (kDa)

9.44

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 83 - 391 7.8e-43 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 734
AccB7I CCANNNNNTGG 2 cut(s) 1262, 1288
AccI GTMKAC 2 cut(s) 288, 821
AccIII TCCGGA 1 cut(s) 997
AciI CCGC 1 cut(s) 424
AclWI GGATC 2 cut(s) 320, 823
AcoI YGGCCR 2 cut(s) 12, 987
AcsI RAATTY 4 cut(s) 265, 532, 647, 710
AcuI CTGAAG 3 cut(s) 420, 865, 1113
AdeI CACNNNGTG 1 cut(s) 637
AfaI GTAC 2 cut(s) 317, 719
AfiI CCNNNNNNNGG 4 cut(s) 277, 369, 1262, 1288
AgsI TTSAA 4 cut(s) 463, 644, 1066, 1213
AjnI CCWGG 1 cut(s) 512
AluBI AGCT 7 cut(s) 195, 360, 526, 606, 788, 879, 1154
AluI AGCT 7 cut(s) 195, 360, 526, 606, 788, 879, 1154
Alw21I GWGCWC 2 cut(s) 9, 362
Alw26I GTCTC 3 cut(s) 482, 941, 1192
AlwI GGATC 2 cut(s) 320, 823
AlwNI CAGNNNCTG 1 cut(s) 329
Ama87I CYCGRG 2 cut(s) 543, 734
Aor13HI TCCGGA 1 cut(s) 997
ApaI GGGCCC 1 cut(s) 658
ApeKI GCWGC 3 cut(s) 788, 829, 876
ApoI RAATTY 4 cut(s) 265, 532, 647, 710
Asp700I GAANNNNTTC 1 cut(s) 196
AspS9I GGNCC 4 cut(s) 131, 654, 655, 1133
AsuHPI GGTGA 5 cut(s) 92, 413, 416, 484, 623
AvaI CYCGRG 2 cut(s) 543, 734
AvaII GGWCC 1 cut(s) 1133
BaeGI GKGCMC 1 cut(s) 658
BalI TGGCCA 2 cut(s) 14, 989
BanII GRGCYC 3 cut(s) 362, 418, 658
BbsI GAAGAC 1 cut(s) 185
Bbv12I GWGCWC 2 cut(s) 9, 362
BbvI GCAGC 3 cut(s) 775, 841, 888
BccI CCATC 6 cut(s) 142, 475, 1084, 1089, 1241, 1264
BceAI ACGGC 1 cut(s) 289
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BciT130I CCWGG 1 cut(s) 514
BclI TGATCA 2 cut(s) 628, 865
BcoDI GTCTC 3 cut(s) 482, 941, 1192
BfaI CTAG 2 cut(s) 506, 1274
BglI GCCNNNNNGGC 2 cut(s) 385, 737
BisI GCNGC 3 cut(s) 789, 830, 877
BlsI GCNGC 3 cut(s) 790, 831, 878
Bme1390I CCNGG 1 cut(s) 514
Bme18I GGWCC 1 cut(s) 1133
BmeT110I CYCGRG 2 cut(s) 543, 734
BmgT120I GGNCC 4 cut(s) 131, 654, 655, 1133
BmiI GGNNCC 1 cut(s) 656
BmrFI CCNGG 1 cut(s) 514
BmsI GCATC 1 cut(s) 966
BpiI GAAGAC 1 cut(s) 185
BpuEI CTTGAG 2 cut(s) 95, 707
Bsa29I ATCGAT 1 cut(s) 779
BsaJI CCNNGG 4 cut(s) 15, 271, 597, 1287
BsaWI WCCGGW 2 cut(s) 102, 997
BsaXI ACNNNNNCTCC 2 cut(s) 1172, 1202
Bsc4I CCNNNNNNNGG 4 cut(s) 277, 369, 1262, 1288
Bse1I ACTGG 3 cut(s) 133, 193, 296
Bse3DI GCAATG 2 cut(s) 380, 474
BseAI TCCGGA 1 cut(s) 997
BseBI CCWGG 1 cut(s) 514
BseCI ATCGAT 1 cut(s) 779
BseDI CCNNGG 4 cut(s) 15, 271, 597, 1287
BseGI GGATG 2 cut(s) 919, 1100
BseLI CCNNNNNNNGG 4 cut(s) 277, 369, 1262, 1288
BseMI GCAATG 2 cut(s) 380, 474
BseMII CTCAG 4 cut(s) 175, 368, 541, 1007
BseNI ACTGG 3 cut(s) 133, 193, 296
BseSI GKGCMC 1 cut(s) 658
BseXI GCAGC 3 cut(s) 775, 841, 888
BseYI CCCAGC 1 cut(s) 522
BsgI GTGCAG 1 cut(s) 774
BshVI ATCGAT 1 cut(s) 779
BsiHKAI GWGCWC 2 cut(s) 9, 362
BsiHKCI CYCGRG 2 cut(s) 543, 734
BsiSI CCGG 3 cut(s) 103, 537, 998
BslFI GGGAC 1 cut(s) 52
BslI CCNNNNNNNGG 4 cut(s) 277, 369, 1262, 1288
BsmAI GTCTC 3 cut(s) 482, 941, 1192
BsmFI GGGAC 1 cut(s) 52
BsoBI CYCGRG 2 cut(s) 543, 734
Bsp120I GGGCCC 1 cut(s) 654
Bsp1286I GDGCHC 4 cut(s) 9, 362, 418, 658
Bsp13I TCCGGA 1 cut(s) 997
Bsp1407I TGTACA 1 cut(s) 315
Bsp143I GATC 6 cut(s) 325, 588, 628, 780, 815, 865
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 1 cut(s) 424
BspCNI CTCAG 4 cut(s) 174, 367, 540, 1008
BspDI ATCGAT 1 cut(s) 779
BspEI TCCGGA 1 cut(s) 997
BspHI TCATGA 1 cut(s) 1101
BspLI GGNNCC 1 cut(s) 656
BspPI GGATC 2 cut(s) 320, 823
BspQI GCTCTTC 2 cut(s) 202, 423
BsrDI GCAATG 2 cut(s) 380, 474
BsrGI TGTACA 1 cut(s) 315
BsrI ACTGG 3 cut(s) 133, 193, 296
BssECI CCNNGG 4 cut(s) 15, 271, 597, 1287
BssMI GATC 6 cut(s) 325, 588, 628, 780, 815, 865
BssNAI GTATAC 1 cut(s) 289
BssT1I CCWWGG 3 cut(s) 15, 597, 1287
Bst1107I GTATAC 1 cut(s) 289
Bst2UI CCWGG 1 cut(s) 514
Bst4CI ACNGT 1 cut(s) 771
Bst6I CTCTTC 4 cut(s) 202, 423, 677, 1017
BstAPI GCANNNNNTGC 1 cut(s) 838
BstAUI TGTACA 1 cut(s) 315
BstC8I GCNNGC 6 cut(s) 62, 604, 729, 742, 1074, 1152
BstDEI CTNAG 4 cut(s) 161, 354, 527, 1016
BstDSI CCRYGG 2 cut(s) 15, 271
BstF5I GGATG 2 cut(s) 919, 1100
BstKTI GATC 6 cut(s) 328, 591, 631, 783, 818, 868
BstMAI GTCTC 3 cut(s) 482, 941, 1192
BstMBI GATC 6 cut(s) 325, 588, 628, 780, 815, 865
BstMWI GCNNNNNNNGC 4 cut(s) 201, 385, 737, 838
BstNI CCWGG 1 cut(s) 514
BstNSI RCATGY 1 cut(s) 1072
BstSCI CCNGG 1 cut(s) 512
BstSLI GKGCMC 1 cut(s) 658
BstV1I GCAGC 3 cut(s) 775, 841, 888
BstV2I GAAGAC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 325
BstYI RGATCY 1 cut(s) 325
BstZ17I GTATAC 1 cut(s) 289
Bsu15I ATCGAT 1 cut(s) 779
BsuTUI ATCGAT 1 cut(s) 779
BtgI CCRYGG 2 cut(s) 15, 271
BtgZI GCGATG 1 cut(s) 577
BtsCI GGATG 2 cut(s) 919, 1100
BtsI GCAGTG 2 cut(s) 27, 1202
BtsIMutI CAGTG 4 cut(s) 27, 169, 186, 1202
Cac8I GCNNGC 6 cut(s) 62, 604, 729, 742, 1074, 1152
CaiI CAGNNNCTG 1 cut(s) 329
CciI TCATGA 1 cut(s) 1101
Cfr13I GGNCC 4 cut(s) 131, 654, 655, 1133
ClaI ATCGAT 1 cut(s) 779
Csp6I GTAC 2 cut(s) 316, 718
CviAII CATG 8 cut(s) 10, 16, 221, 365, 635, 944, 1069, 1102
CviQI GTAC 2 cut(s) 316, 718
DdeI CTNAG 4 cut(s) 161, 354, 527, 1016
DpnI GATC 6 cut(s) 327, 590, 630, 782, 817, 867
DpnII GATC 6 cut(s) 325, 588, 628, 780, 815, 865
DraIII CACNNNGTG 1 cut(s) 637
EaeI YGGCCR 2 cut(s) 12, 987
Eam1104I CTCTTC 4 cut(s) 202, 423, 677, 1017
EarI CTCTTC 4 cut(s) 202, 423, 677, 1017
Ecl136II GAGCTC 1 cut(s) 360
Eco130I CCWWGG 3 cut(s) 15, 597, 1287
Eco24I GRGCYC 3 cut(s) 362, 418, 658
Eco47I GGWCC 1 cut(s) 1133
Eco53kI GAGCTC 1 cut(s) 360
Eco57I CTGAAG 3 cut(s) 420, 865, 1113
Eco88I CYCGRG 2 cut(s) 543, 734
EcoICRI GAGCTC 1 cut(s) 360
EcoO109I RGGNCCY 2 cut(s) 654, 655
EcoRI GAATTC 1 cut(s) 265
EcoRII CCWGG 1 cut(s) 512
EcoT14I CCWWGG 3 cut(s) 15, 597, 1287
EcoT38I GRGCYC 3 cut(s) 362, 418, 658
ErhI CCWWGG 3 cut(s) 15, 597, 1287
FaeI CATG 8 cut(s) 13, 19, 224, 368, 638, 947, 1072, 1105
FalI AAGNNNNNCTT 4 cut(s) 184, 216, 590, 622
FaqI GGGAC 1 cut(s) 52
FatI CATG 8 cut(s) 9, 15, 220, 364, 634, 943, 1068, 1101
FauNDI CATATG 1 cut(s) 968
FbaI TGATCA 2 cut(s) 628, 865
FblI GTMKAC 2 cut(s) 288, 821
Fnu4HI GCNGC 3 cut(s) 789, 830, 877
FokI GGATG 2 cut(s) 926, 1107
FriOI GRGCYC 3 cut(s) 362, 418, 658
Fsp4HI GCNGC 3 cut(s) 789, 830, 877
FspBI CTAG 2 cut(s) 506, 1274
GluI GCNGC 3 cut(s) 789, 830, 877
GsaI CCCAGC 1 cut(s) 526
HapII CCGG 3 cut(s) 103, 537, 998
Hin1II CATG 8 cut(s) 13, 19, 224, 368, 638, 947, 1072, 1105
HinfI GANTC 1 cut(s) 994
HpaII CCGG 3 cut(s) 103, 537, 998
HphI GGTGA 5 cut(s) 92, 413, 416, 484, 623
Hpy166II GTNNAC 2 cut(s) 289, 822
Hpy188I TCNGA 6 cut(s) 357, 400, 530, 572, 884, 1118
Hpy188III TCNNGA 6 cut(s) 112, 545, 813, 998, 1102, 1131
Hpy8I GTNNAC 2 cut(s) 289, 822
HpyAV CCTTC 5 cut(s) 395, 457, 992, 1137, 1219
HpyCH4III ACNGT 1 cut(s) 771
HpyCH4V TGCA 7 cut(s) 60, 204, 661, 791, 829, 921, 1142
HpyF10VI GCNNNNNNNGC 4 cut(s) 201, 385, 737, 838
HpyF3I CTNAG 4 cut(s) 161, 354, 527, 1016
Hsp92II CATG 8 cut(s) 13, 19, 224, 368, 638, 947, 1072, 1105
Kpn2I TCCGGA 1 cut(s) 997
Ksp22I TGATCA 2 cut(s) 628, 865
Kzo9I GATC 6 cut(s) 325, 588, 628, 780, 815, 865
LguI GCTCTTC 2 cut(s) 202, 423
LmnI GCTCC 3 cut(s) 4, 365, 984
Lsp1109I GCAGC 3 cut(s) 775, 841, 888
LweI GCATC 1 cut(s) 966
MaeI CTAG 2 cut(s) 506, 1274
MaeIII GTNAC 2 cut(s) 617, 1200
MalI GATC 6 cut(s) 327, 590, 630, 782, 817, 867
MboI GATC 6 cut(s) 325, 588, 628, 780, 815, 865
MflI RGATCY 1 cut(s) 325
MhlI GDGCHC 4 cut(s) 9, 362, 418, 658
MlsI TGGCCA 2 cut(s) 14, 989
MluCI AATT 6 cut(s) 265, 532, 549, 647, 710, 759
MluNI TGGCCA 2 cut(s) 14, 989
MmeI TCCRAC 1 cut(s) 239
Mox20I TGGCCA 2 cut(s) 14, 989
MroI TCCGGA 1 cut(s) 997
MroXI GAANNNNTTC 1 cut(s) 196
MscI TGGCCA 2 cut(s) 14, 989
MseI TTAA 3 cut(s) 447, 762, 855
MslI CAYNNNNRTG 2 cut(s) 14, 20
Msp20I TGGCCA 2 cut(s) 14, 989
MspI CCGG 3 cut(s) 103, 537, 998
MspR9I CCNGG 1 cut(s) 514
MvaI CCWGG 1 cut(s) 514
MwoI GCNNNNNNNGC 4 cut(s) 201, 385, 737, 838
NcoI CCATGG 1 cut(s) 15
NdeI CATATG 1 cut(s) 968
NdeII GATC 6 cut(s) 325, 588, 628, 780, 815, 865
NlaIII CATG 8 cut(s) 13, 19, 224, 368, 638, 947, 1072, 1105
NlaIV GGNNCC 1 cut(s) 656
NmuCI GTSAC 1 cut(s) 1200
NspI RCATGY 1 cut(s) 1072
PaeR7I CTCGAG 2 cut(s) 543, 734
PagI TCATGA 1 cut(s) 1101
PciSI GCTCTTC 2 cut(s) 202, 423
PdmI GAANNNNTTC 1 cut(s) 196
PfeI GAWTC 1 cut(s) 994
PflMI CCANNNNNTGG 2 cut(s) 1262, 1288
PkrI GCNGC 3 cut(s) 790, 831, 878
Psp124BI GAGCTC 1 cut(s) 362
Psp6I CCWGG 1 cut(s) 512
PspFI CCCAGC 1 cut(s) 522
PspGI CCWGG 1 cut(s) 512
PspN4I GGNNCC 1 cut(s) 656
PspOMI GGGCCC 1 cut(s) 654
PspPI GGNCC 4 cut(s) 131, 654, 655, 1133
PspXI VCTCGAGB 1 cut(s) 734
PstNI CAGNNNCTG 1 cut(s) 329
PsuI RGATCY 1 cut(s) 325
RsaI GTAC 2 cut(s) 317, 719
RsaNI GTAC 2 cut(s) 316, 718
RseI CAYNNNNRTG 2 cut(s) 14, 20
SacI GAGCTC 1 cut(s) 362
SapI GCTCTTC 2 cut(s) 202, 423
SaqAI TTAA 3 cut(s) 447, 762, 855
SatI GCNGC 3 cut(s) 789, 830, 877
Sau3AI GATC 6 cut(s) 325, 588, 628, 780, 815, 865
Sau96I GGNCC 4 cut(s) 131, 654, 655, 1133
ScrFI CCNGG 1 cut(s) 514
SduI GDGCHC 4 cut(s) 9, 362, 418, 658
SfaNI GCATC 1 cut(s) 966
Sfr274I CTCGAG 2 cut(s) 543, 734
SinI GGWCC 1 cut(s) 1133
SlaI CTCGAG 2 cut(s) 543, 734
SmiMI CAYNNNNRTG 2 cut(s) 14, 20
SmlI CTYRAG 4 cut(s) 110, 543, 722, 734
SmoI CTYRAG 4 cut(s) 110, 543, 722, 734
Sse9I AATT 6 cut(s) 265, 532, 549, 647, 710, 759
SsiI CCGC 1 cut(s) 424
SspMI CTAG 2 cut(s) 506, 1274
SstI GAGCTC 1 cut(s) 362
StyD4I CCNGG 1 cut(s) 512
StyI CCWWGG 3 cut(s) 15, 597, 1287
TaaI ACNGT 1 cut(s) 771
TaqI TCGA 4 cut(s) 544, 735, 779, 1168
TasI AATT 6 cut(s) 265, 532, 549, 647, 710, 759
TatI WGTACW 1 cut(s) 315
TfiI GAWTC 1 cut(s) 994
Tru1I TTAA 3 cut(s) 447, 762, 855
Tru9I TTAA 3 cut(s) 447, 762, 855
TscAI CASTG 4 cut(s) 27, 169, 193, 1209
TseFI GTSAC 1 cut(s) 1200
TseI GCWGC 3 cut(s) 788, 829, 876
Tsp45I GTSAC 1 cut(s) 1200
TspDTI ATGAA 5 cut(s) 28, 185, 1026, 1049, 1118
TspRI CASTG 4 cut(s) 27, 169, 193, 1209
Van91I CCANNNNNTGG 2 cut(s) 1262, 1288
VpaK11BI GGWCC 1 cut(s) 1133
XapI RAATTY 4 cut(s) 265, 532, 647, 710
XceI RCATGY 1 cut(s) 1072
XhoI CTCGAG 2 cut(s) 543, 734
XmiI GTMKAC 2 cut(s) 288, 821
XmnI GAANNNNTTC 1 cut(s) 196
XspI CTAG 2 cut(s) 506, 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.