RLG00000026513

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
3490803 .. 3493135
2333 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026513

Sequence Viewer

Length: 1398 bp
ATGAAGAAGAAGACTAGCCAAAGCTCTTCTTCTTCTTCATTTGGGCCATCTTCAAATAGTATAACCCATGACATACACTCAACTCTCTTTCCCTACTTTGCTCGCTGGCAGAAAGCCTACGGAAAAATGTTCGTTTACTGGTTGGGCACAGAGCCATTCCTATACGTAGCAGATGCAGCCTTACTGAAAAAATTGTCTTCGGAGGTCACCGCAAAGAATTGGGGGAAACCGGCTGTGTTTAGACGCGATAGAGCTCCCATGTTTGGTAATGGCCTTGTCATGTCCGAAGGGGATGATTGGGTCCGTCACCGCCATGTTATCACTCCAGCATTTAACCCTACTAACTTGAAGGCAATGGCTAGTTTGATGGTGGAGACCGCAACAACAATGCTAGACAACTGGGCCACTCAGATAAACACTTCCGGCATCCAAGAAATTGACGTTGAGGATTCAATCACGGCTACAGCTGGGGAGATCATCGCCAAGACCAGCTTCGGTATTAGTTACCAGAGTGGTCGCCTAGTGTTCGAAAAATTAAGAGCACTACAAATGACCCTCTTCAAGACGACCCGTTTTGTGGGAGTTCCTTTTGGCAAATTCATATATCCCATGAAAACCCTCGAGGCCGGAAGACTCGGGGAAGAAATCAACCAGCTCTTTTTATCGATCATCGCTGCACGAAAGAAATCGATTAGATCAGAATCCCCGCAACACGACCTTCTCGGGATGCTACTCAAAGAAAGCGATAAACCGGGCAACTTCTCGAGGTCTCTGACCACACAGGAACTGGTGGACGAGTGCAAGACATTTTTCTTCGGCGGTCACGAGACAACGGCATTGGCGATCACATGGACGATGCTACTTCTAGCTACCCATACAGATTGGCAAGATCAATTGAGGGCGGAGATTAAGGAAGTTGTGGGAGATAAAGAAATTGATGTCAATAACCTTGCTGGTCTAAAGAAGATGGGATGGGTGATGAATGAGGTTCTCCGATTATACCCTTCAGCACCAAATGCGCAGAGGCAAGCAAAAGATGACATTCAAGTGAGTGAAGACCTAACAATCCCTAAAGGAACCAATATGTGGATCGACACTGTGGGTATGCACCATGACCCTGAGCTATGGGGTGAGGATGTGCACGAGTTCAAGCCGGAGAGGTTCAAGGATGACATACATGGTGGGTGCAAGCACAAGATGGGTTACTTGCCATTCGGGTTCGGAGGAAGGATGTGCATTGGTAGGAACTTGACCTTTTTGGAGTACAAGATTGTGCTGACCCTAATTCTGTCTAGGTTTTCTTTTACTGTTTCCCCGACTTATACTCATGCTCCTTCTATTGCGCTCTCTCTGAGGCCTTGCAATGGCTTGCCTCTAGTTCTCCAGCCCCTTAACTAG

Protein Analysis

466

Amino Acids

52.27

Weight (kDa)

8.47

Isoelectric Point (pI)

39.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 28 - 440 9.9e-82 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 620
Acc16I TGCGCA 1 cut(s) 1020
AccB7I CCANNNNNTGG 1 cut(s) 1086
AccII CGCG 1 cut(s) 246
AciI CCGC 6 cut(s) 210, 310, 378, 707, 819, 902
AclWI GGATC 1 cut(s) 1097
AcsI RAATTY 1 cut(s) 596
AcuI CTGAAG 1 cut(s) 990
AfaI GTAC 1 cut(s) 1265
AfiI CCNNNNNNNGG 4 cut(s) 263, 577, 1086, 1364
AgsI TTSAA 7 cut(s) 54, 349, 453, 562, 1046, 1150, 1165
AjuI GAANNNNNNNTTGG 2 cut(s) 476, 508
AluBI AGCT 7 cut(s) 24, 254, 467, 492, 655, 869, 1123
AluI AGCT 7 cut(s) 24, 254, 467, 492, 655, 869, 1123
Alw21I GWGCWC 3 cut(s) 256, 544, 1143
Alw26I GTCTC 3 cut(s) 368, 774, 821
Alw44I GTGCAC 1 cut(s) 1139
AlwI GGATC 1 cut(s) 1097
AlwNI CAGNNNCTG 1 cut(s) 787
Ama87I CYCGRG 4 cut(s) 620, 635, 722, 763
AoxI GGCC 5 cut(s) 44, 271, 402, 624, 1355
ApaLI GTGCAC 1 cut(s) 1139
ApeKI GCWGC 2 cut(s) 176, 674
ApoI RAATTY 1 cut(s) 596
AspLEI GCGC 2 cut(s) 1021, 1345
AspS9I GGNCC 3 cut(s) 44, 301, 402
AsuC2I CCSGG 1 cut(s) 753
AsuHPI GGTGA 4 cut(s) 199, 299, 988, 1142
AsuII TTCGAA 1 cut(s) 528
AvaI CYCGRG 4 cut(s) 620, 635, 722, 763
AvaII GGWCC 1 cut(s) 301
BaeGI GKGCMC 2 cut(s) 149, 1143
BanII GRGCYC 1 cut(s) 256
BauI CACGAG 2 cut(s) 824, 1142
BbsI GAAGAC 4 cut(s) 17, 189, 637, 1062
Bbv12I GWGCWC 3 cut(s) 256, 544, 1143
BbvI GCAGC 2 cut(s) 188, 661
BccI CCATC 5 cut(s) 55, 361, 961, 966, 1192
BceAI ACGGC 2 cut(s) 474, 849
BcnI CCSGG 1 cut(s) 753
BcoDI GTCTC 3 cut(s) 368, 774, 821
BfaI CTAG 8 cut(s) 15, 360, 392, 521, 866, 1293, 1376, 1396
BfmI CTRYAG 1 cut(s) 462
BisI GCNGC 2 cut(s) 177, 675
BlsI GCNGC 2 cut(s) 178, 676
Bme1390I CCNGG 1 cut(s) 753
Bme18I GGWCC 1 cut(s) 301
BmeT110I CYCGRG 4 cut(s) 620, 635, 722, 763
BmgT120I GGNCC 3 cut(s) 44, 301, 402
BmiI GGNNCC 2 cut(s) 302, 1078
BmrFI CCNGG 1 cut(s) 753
BmrI ACTGGG 1 cut(s) 409
BmsI GCATC 4 cut(s) 163, 435, 717, 846
BmuI ACTGGG 1 cut(s) 409
BpiI GAAGAC 4 cut(s) 17, 189, 637, 1062
BpmI CTGGAG 2 cut(s) 309, 1367
Bpu10I CCTNAGC 1 cut(s) 1119
Bpu14I TTCGAA 1 cut(s) 528
BpuMI CCSGG 1 cut(s) 753
Bsa29I ATCGAT 2 cut(s) 665, 689
BsaAI YACGTR 1 cut(s) 166
BsaBI GATNNNNATC 1 cut(s) 700
BsaI GGTCTC 2 cut(s) 368, 774
BsaXI ACNNNNNCTCC 2 cut(s) 1315, 1345
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 577, 1086, 1364
Bse118I RCCGGY 1 cut(s) 229
Bse1I ACTGG 3 cut(s) 143, 404, 792
Bse3DI GCAATG 2 cut(s) 360, 1369
Bse8I GATNNNNATC 1 cut(s) 700
BseCI ATCGAT 2 cut(s) 665, 689
BseGI GGATG 7 cut(s) 298, 426, 732, 977, 1141, 1174, 1236
BseJI GATNNNNATC 1 cut(s) 700
BseLI CCNNNNNNNGG 4 cut(s) 263, 577, 1086, 1364
BseMI GCAATG 2 cut(s) 360, 1369
BseMII CTCAG 3 cut(s) 422, 1110, 1343
BseNI ACTGG 3 cut(s) 143, 404, 792
BseSI GKGCMC 2 cut(s) 149, 1143
BseXI GCAGC 2 cut(s) 188, 661
BseYI CCCAGC 1 cut(s) 467
BsgI GTGCAG 1 cut(s) 660
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 5 cut(s) 46, 273, 404, 626, 1357
BshVI ATCGAT 2 cut(s) 665, 689
BsiHKAI GWGCWC 3 cut(s) 256, 544, 1143
BsiHKCI CYCGRG 4 cut(s) 620, 635, 722, 763
BsiSI CCGG 5 cut(s) 230, 423, 627, 752, 1154
BslI CCNNNNNNNGG 4 cut(s) 263, 577, 1086, 1364
BsmAI GTCTC 3 cut(s) 368, 774, 821
BsnI GGCC 5 cut(s) 46, 273, 404, 626, 1357
Bso31I GGTCTC 2 cut(s) 368, 774
BsoBI CYCGRG 4 cut(s) 620, 635, 722, 763
Bsp119I TTCGAA 1 cut(s) 528
Bsp1286I GDGCHC 4 cut(s) 149, 256, 544, 1143
Bsp143I GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
BspACI CCGC 6 cut(s) 210, 310, 378, 707, 819, 902
BspANI GGCC 5 cut(s) 46, 273, 404, 626, 1357
BspCNI CTCAG 3 cut(s) 421, 1111, 1344
BspDI ATCGAT 2 cut(s) 665, 689
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 2 cut(s) 302, 1078
BspPI GGATC 1 cut(s) 1097
BspQI GCTCTTC 1 cut(s) 31
BspT104I TTCGAA 1 cut(s) 528
BspTNI GGTCTC 2 cut(s) 368, 774
BsrDI GCAATG 2 cut(s) 360, 1369
BsrFI RCCGGY 1 cut(s) 229
BsrI ACTGG 3 cut(s) 143, 404, 792
BssAI RCCGGY 1 cut(s) 229
BssMI GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
BssSI CACGAG 2 cut(s) 824, 1142
Bst2BI CACGAG 2 cut(s) 824, 1142
Bst4CI ACNGT 2 cut(s) 1099, 1309
Bst6I CTCTTC 2 cut(s) 31, 563
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstBAI YACGTR 1 cut(s) 166
BstBI TTCGAA 1 cut(s) 528
BstC8I GCNNGC 5 cut(s) 103, 107, 1029, 1190, 1370
BstDEI CTNAG 3 cut(s) 408, 1119, 1352
BstEII GGTNACC 1 cut(s) 205
BstF5I GGATG 7 cut(s) 298, 426, 732, 977, 1141, 1174, 1236
BstFNI CGCG 1 cut(s) 246
BstHHI GCGC 2 cut(s) 1021, 1345
BstKTI GATC 6 cut(s) 477, 669, 698, 846, 892, 1092
BstMAI GTCTC 3 cut(s) 368, 774, 821
BstMBI GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
BstMWI GCNNNNNNNGC 2 cut(s) 176, 1016
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 1 cut(s) 751
BstSFI CTRYAG 1 cut(s) 462
BstSLI GKGCMC 2 cut(s) 149, 1143
BstSNI TACGTA 1 cut(s) 166
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 2 cut(s) 188, 661
BstV2I GAAGAC 4 cut(s) 17, 189, 637, 1062
Bsu15I ATCGAT 2 cut(s) 665, 689
BsuRI GGCC 5 cut(s) 46, 273, 404, 626, 1357
BsuTUI ATCGAT 2 cut(s) 665, 689
BtgZI GCGATG 2 cut(s) 463, 655
BtsCI GGATG 7 cut(s) 298, 426, 732, 977, 1141, 1174, 1236
BtsIMutI CAGTG 1 cut(s) 1095
Cac8I GCNNGC 5 cut(s) 103, 107, 1029, 1190, 1370
CaiI CAGNNNCTG 1 cut(s) 787
CfoI GCGC 2 cut(s) 1021, 1345
Cfr10I RCCGGY 1 cut(s) 229
Cfr13I GGNCC 3 cut(s) 44, 301, 402
ClaI ATCGAT 2 cut(s) 665, 689
CseI GACGC 1 cut(s) 252
Csp6I GTAC 1 cut(s) 1264
CviAII CATG 9 cut(s) 68, 259, 280, 314, 610, 849, 1112, 1178, 1328
CviQI GTAC 1 cut(s) 1264
DdeI CTNAG 3 cut(s) 408, 1119, 1352
DpnI GATC 6 cut(s) 476, 668, 697, 845, 891, 1091
DpnII GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
Eam1104I CTCTTC 2 cut(s) 31, 563
EarI CTCTTC 2 cut(s) 31, 563
EciI GGCGGA 1 cut(s) 917
Ecl136II GAGCTC 1 cut(s) 254
Eco105I TACGTA 1 cut(s) 166
Eco147I AGGCCT 1 cut(s) 1357
Eco24I GRGCYC 1 cut(s) 256
Eco31I GGTCTC 2 cut(s) 368, 774
Eco47I GGWCC 1 cut(s) 301
Eco53kI GAGCTC 1 cut(s) 254
Eco57I CTGAAG 1 cut(s) 990
Eco88I CYCGRG 4 cut(s) 620, 635, 722, 763
Eco91I GGTNACC 1 cut(s) 205
EcoICRI GAGCTC 1 cut(s) 254
EcoO65I GGTNACC 1 cut(s) 205
EcoT38I GRGCYC 1 cut(s) 256
FaeI CATG 9 cut(s) 71, 262, 283, 317, 613, 852, 1115, 1181, 1331
FalI AAGNNNNNCTT 4 cut(s) 13, 45, 476, 508
FatI CATG 9 cut(s) 67, 258, 279, 313, 609, 848, 1111, 1177, 1327
FauI CCCGC 1 cut(s) 714
Fnu4HI GCNGC 2 cut(s) 177, 675
FokI GGATG 7 cut(s) 305, 413, 739, 984, 1148, 1181, 1243
FriOI GRGCYC 1 cut(s) 256
Fsp4HI GCNGC 2 cut(s) 177, 675
FspBI CTAG 8 cut(s) 15, 360, 392, 521, 866, 1293, 1376, 1396
FspI TGCGCA 1 cut(s) 1020
GlaI GCGC 2 cut(s) 1020, 1344
GluI GCNGC 2 cut(s) 177, 675
GsaI CCCAGC 1 cut(s) 471
GsuI CTGGAG 2 cut(s) 309, 1367
HaeIII GGCC 5 cut(s) 46, 273, 404, 626, 1357
HapII CCGG 5 cut(s) 230, 423, 627, 752, 1154
HgaI GACGC 1 cut(s) 252
HhaI GCGC 2 cut(s) 1021, 1345
Hin1II CATG 9 cut(s) 71, 262, 283, 317, 613, 852, 1115, 1181, 1331
Hin6I GCGC 2 cut(s) 1019, 1343
HinP1I GCGC 2 cut(s) 1019, 1343
HinfI GANTC 3 cut(s) 449, 633, 701
HpaII CCGG 5 cut(s) 230, 423, 627, 752, 1154
HphI GGTGA 4 cut(s) 199, 299, 988, 1142
Hpy166II GTNNAC 3 cut(s) 136, 793, 1141
Hpy188I TCNGA 8 cut(s) 202, 286, 411, 700, 774, 995, 1223, 1353
Hpy188III TCNNGA 4 cut(s) 562, 724, 763, 824
Hpy8I GTNNAC 3 cut(s) 136, 793, 1141
HpyAV CCTTC 6 cut(s) 281, 343, 728, 1014, 1221, 1344
HpyCH4III ACNGT 2 cut(s) 1099, 1309
HpyCH4IV ACGT 2 cut(s) 165, 441
HpyCH4V TGCA 8 cut(s) 176, 677, 801, 1108, 1141, 1188, 1236, 1362
HpyF10VI GCNNNNNNNGC 2 cut(s) 176, 1016
HpyF3I CTNAG 3 cut(s) 408, 1119, 1352
HpySE526I ACGT 2 cut(s) 165, 441
Hsp92II CATG 9 cut(s) 71, 262, 283, 317, 613, 852, 1115, 1181, 1331
HspAI GCGC 2 cut(s) 1019, 1343
Kzo9I GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
LguI GCTCTTC 1 cut(s) 31
LmnI GCTCC 2 cut(s) 259, 1336
Lsp1109I GCAGC 2 cut(s) 188, 661
LweI GCATC 4 cut(s) 163, 435, 717, 846
MaeI CTAG 8 cut(s) 15, 360, 392, 521, 866, 1293, 1376, 1396
MaeII ACGT 2 cut(s) 165, 441
MaeIII GTNAC 5 cut(s) 205, 305, 503, 821, 1202
MalI GATC 6 cut(s) 476, 668, 697, 845, 891, 1091
MboI GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
MfeI CAATTG 1 cut(s) 893
MhlI GDGCHC 4 cut(s) 149, 256, 544, 1143
MluCI AATT 8 cut(s) 191, 217, 435, 533, 596, 893, 933, 1284
MlyI GAGTC 1 cut(s) 627
MseI TTAA 4 cut(s) 333, 536, 909, 1392
MslI CAYNNNNRTG 2 cut(s) 312, 1046
MspA1I CMGCKG 1 cut(s) 467
MspI CCGG 5 cut(s) 230, 423, 627, 752, 1154
MspR9I CCNGG 1 cut(s) 753
MunI CAATTG 1 cut(s) 893
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 2 cut(s) 176, 1016
NciI CCSGG 1 cut(s) 753
NdeII GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
NlaIII CATG 9 cut(s) 71, 262, 283, 317, 613, 852, 1115, 1181, 1331
NlaIV GGNNCC 2 cut(s) 302, 1078
NmuCI GTSAC 3 cut(s) 205, 305, 821
NsbI TGCGCA 1 cut(s) 1020
NspV TTCGAA 1 cut(s) 528
PaeR7I CTCGAG 2 cut(s) 620, 763
PceI AGGCCT 1 cut(s) 1357
PciSI GCTCTTC 1 cut(s) 31
PcsI WCGNNNNNNNCGW 2 cut(s) 822, 839
PfeI GAWTC 2 cut(s) 449, 701
PflMI CCANNNNNTGG 1 cut(s) 1086
PkrI GCNGC 2 cut(s) 178, 676
PleI GAGTC 1 cut(s) 627
PpsI GAGTC 1 cut(s) 627
Ppu21I YACGTR 1 cut(s) 166
Psp124BI GAGCTC 1 cut(s) 256
PspEI GGTNACC 1 cut(s) 205
PspFI CCCAGC 1 cut(s) 467
PspN4I GGNNCC 2 cut(s) 302, 1078
PspPI GGNCC 3 cut(s) 44, 301, 402
PspXI VCTCGAGB 1 cut(s) 620
PstNI CAGNNNCTG 1 cut(s) 787
PvuII CAGCTG 1 cut(s) 467
RsaI GTAC 1 cut(s) 1265
RsaNI GTAC 1 cut(s) 1264
RseI CAYNNNNRTG 2 cut(s) 312, 1046
SacI GAGCTC 1 cut(s) 256
SapI GCTCTTC 1 cut(s) 31
SaqAI TTAA 4 cut(s) 333, 536, 909, 1392
SatI GCNGC 2 cut(s) 177, 675
Sau3AI GATC 6 cut(s) 474, 666, 695, 843, 889, 1089
Sau96I GGNCC 3 cut(s) 44, 301, 402
SchI GAGTC 1 cut(s) 627
ScrFI CCNGG 1 cut(s) 753
SduI GDGCHC 4 cut(s) 149, 256, 544, 1143
SfaNI GCATC 4 cut(s) 163, 435, 717, 846
SfcI CTRYAG 1 cut(s) 462
Sfr274I CTCGAG 2 cut(s) 620, 763
SfuI TTCGAA 1 cut(s) 528
SinI GGWCC 1 cut(s) 301
SlaI CTCGAG 2 cut(s) 620, 763
SmiMI CAYNNNNRTG 2 cut(s) 312, 1046
SmlI CTYRAG 2 cut(s) 620, 763
SmoI CTYRAG 2 cut(s) 620, 763
SnaBI TACGTA 1 cut(s) 166
Sse9I AATT 8 cut(s) 191, 217, 435, 533, 596, 893, 933, 1284
SseBI AGGCCT 1 cut(s) 1357
SsiI CCGC 6 cut(s) 210, 310, 378, 707, 819, 902
SspMI CTAG 8 cut(s) 15, 360, 392, 521, 866, 1293, 1376, 1396
SstI GAGCTC 1 cut(s) 256
StuI AGGCCT 1 cut(s) 1357
StyD4I CCNGG 1 cut(s) 751
TaaI ACNGT 2 cut(s) 1099, 1309
TaiI ACGT 2 cut(s) 168, 444
TaqI TCGA 6 cut(s) 528, 621, 665, 689, 764, 1092
TasI AATT 8 cut(s) 191, 217, 435, 533, 596, 893, 933, 1284
TatI WGTACW 1 cut(s) 1263
TfiI GAWTC 2 cut(s) 449, 701
Tru1I TTAA 4 cut(s) 333, 536, 909, 1392
Tru9I TTAA 4 cut(s) 333, 536, 909, 1392
TscAI CASTG 1 cut(s) 1102
TseFI GTSAC 3 cut(s) 205, 305, 821
TseI GCWGC 2 cut(s) 176, 674
Tsp45I GTSAC 3 cut(s) 205, 305, 821
TspDTI ATGAA 5 cut(s) 17, 27, 589, 626, 995
TspGWI ACGGA 2 cut(s) 135, 293
TspRI CASTG 1 cut(s) 1102
Van91I CCANNNNNTGG 1 cut(s) 1086
VneI GTGCAC 1 cut(s) 1139
VpaK11BI GGWCC 1 cut(s) 301
XapI RAATTY 1 cut(s) 596
XcmI CCANNNNNNNNNTGG 1 cut(s) 784
XhoI CTCGAG 2 cut(s) 620, 763
XspI CTAG 8 cut(s) 15, 360, 392, 521, 866, 1293, 1376, 1396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.