MD01G1203000.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
29900533 .. 29902640
2108 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1203000.v1.1.491

Sequence Viewer

Length: 1515 bp
ATGGAAACCATTCTTCTAGTTTTCGTCATCGCGATCGTCATGGCACTTCTGTATATTTTCTGCAGATTAATATTTTCTCTCTGGGGTTTCCCAATTCTTGCATACAGGAAGCTCAAGAAAAATGGGTTGGATGGTCCCTCTCCAAGGTTTCCATTCGGAAATCTGAGTGAGATGAAAAAGAAGACCATCAATTTTCAAAGTTCAAATATCTCCCATGACATACACTCAACTCTTTTTCCTTTTTTTACTCGCTGGCAAAACTCTTTCGGAAAGACGTTCGTTTATTGGTTGGGGACTGAGCCATTTTTGTACATAGCAGATCCAGAGCTACTGAAAAAACTGTCTGCGGAGGTGACAGCAAAGAACTGGGGGAAGCCAGCGGTGTTCCGACGCGATAGAGCCCCGATGTTCGGTAATGGCCTAGTCATGTCCGAAGGGAAAGACTGGGTTCGTCACCGCCATGTTATCACTCCTGCTTTTAACCCAACAAACTTGAAGGCAATGGCGAGCTTAATCGTGGAGACCACCATCAAAATGCTAGACAATTGGAAAGATTCCGGTGCTCAAGAAATCGACGTCGAGAGAGAAATCACAGCAACCTCCGGAGACATCATCGCCAAGACCGGCTTTGGCATCAGCTACCAAAGTGGCCGCCTAGTGTTCGAAAAACTAAGATCCTTGCAAATGACACTCTTCAAAACGAGCCGTCTTGTGGGAGTTCCTTTCGGAAAAATTATGCACCCTAAGGAAACCCTAAAGGCCAGAAAACTTGGGCAAGAAATCAACCAATTGTTCTTGTCAATCATTGACGAAAGGCAAAAATCCATCAAAGGGTCGACGCCGCAGTGCGACCTGCTTGGCTTGTTGCTTAAGGAGAGTGAACGAGGCTTCACAACACAAGAACTTGTGGATGAGTGCAAGACATTTTTCTTTGGAGGTCATGAGACAACTGCATTGGCAATCACATGGACAATGTTGCTTCTGGCCACCCACCAGGATTGGCAACATCAATTGAGAGAGGAGAGTAGGGAAGTGGTCGGAGATAATAAAGAAATTGATGTGGACATGCTTTCCGAACTAAAGAAGATGGGATGGGTGATGAATGAAGCCTTACGACTATACCCTTCATCACCAAATGCACAAAGGCAAGCCAAAGCCGACATTCATGTGAGCGACAACCTGTCCATTCCGAGTGGAACAAACATGTGGATTGACATCGTCGGCATGCACCACGACCCGGCCCTGTGGGGCGAGGACGTCAACGAGTTCAAGCCGGAGAGGTTCAAGGACGACATCCACGGCGGGTGCAAGCACAAGATGGGGTACTTGCCTTTCGGGTTTGGAGGGAGAATGTGCATTGGTCGAAACTTGACTTTCTTGGAGTACAAGATAGTTCTAACCCTAATTCTAACTAGGTTTTCTTTTACCATCTCTCCAACTTATAGCCACTCGCCTTCCGTTGAGCTCACTCTGAGGCCTTCCTATGGCCTGCCTCTAGCACTCCAGCCCCTCTAG

Protein Analysis

505

Amino Acids

57.36

Weight (kDa)

8.95

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 76 - 488 2e-82 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 579, 1260
Acc36I ACCTGC 1 cut(s) 861
AccI GTMKAC 1 cut(s) 836
AccII CGCG 2 cut(s) 32, 393
AccIII TCCGGA 1 cut(s) 602
AciI CCGC 6 cut(s) 347, 380, 457, 652, 842, 1302
AclWI GGATC 2 cut(s) 314, 669
AcoI YGGCCR 2 cut(s) 649, 984
AcyI GRCGYC 3 cut(s) 576, 839, 1257
AfaI GTAC 3 cut(s) 311, 1325, 1385
AfiI CCNNNNNNNGG 6 cut(s) 144, 410, 712, 831, 1237, 1484
AflII CTTAAG 1 cut(s) 869
AflIII ACRYGT 1 cut(s) 1203
AgsI TTSAA 6 cut(s) 197, 204, 496, 697, 1270, 1285
AhdI GACNNNNNGTC 1 cut(s) 1180
AjnI CCWGG 1 cut(s) 993
AjuI GAANNNNNNNTTGG 2 cut(s) 110, 142
AluBI AGCT 5 cut(s) 112, 328, 510, 639, 1465
AluI AGCT 5 cut(s) 112, 328, 510, 639, 1465
Alw21I GWGCWC 2 cut(s) 565, 1467
Alw26I GTCTC 3 cut(s) 515, 600, 938
AlwI GGATC 2 cut(s) 314, 669
Aor13HI TCCGGA 1 cut(s) 602
AoxI GGCC 7 cut(s) 418, 649, 759, 984, 1239, 1475, 1486
AseI ATTAAT 1 cut(s) 68
Asp700I GAANNNNTTC 1 cut(s) 9
AspS9I GGNCC 2 cut(s) 134, 1240
AsuC2I CCSGG 1 cut(s) 1238
AsuHPI GGTGA 4 cut(s) 364, 446, 1108, 1122
AsuII TTCGAA 1 cut(s) 663
AvaII GGWCC 1 cut(s) 134
AxyI CCTNAGG 1 cut(s) 744
BalI TGGCCA 1 cut(s) 986
BanII GRGCYC 2 cut(s) 403, 1467
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 2 cut(s) 565, 1467
BccI CCATC 8 cut(s) 125, 194, 536, 833, 1081, 1086, 1312, 1436
BceAI ACGGC 2 cut(s) 690, 1315
BciT130I CCWGG 1 cut(s) 995
BcnI CCSGG 1 cut(s) 1238
BcoDI GTCTC 3 cut(s) 515, 600, 938
BfaI CTAG 7 cut(s) 17, 422, 539, 656, 1413, 1496, 1513
BfmI CTRYAG 1 cut(s) 61
BfrI CTTAAG 1 cut(s) 869
BfuAI ACCTGC 1 cut(s) 861
BisI GCNGC 2 cut(s) 652, 842
BlsI GCNGC 2 cut(s) 653, 843
Bme1390I CCNGG 2 cut(s) 995, 1238
Bme18I GGWCC 1 cut(s) 134
BmeRI GACNNNNNGTC 1 cut(s) 1180
BmgT120I GGNCC 2 cut(s) 134, 1240
BmiI GGNNCC 1 cut(s) 136
BmrFI CCNGG 2 cut(s) 995, 1238
BmrI ACTGGG 2 cut(s) 376, 454
BmsI GCATC 1 cut(s) 642
BmuI ACTGGG 2 cut(s) 376, 454
BpiI GAAGAC 1 cut(s) 188
BpmI CTGGAG 1 cut(s) 1487
Bpu14I TTCGAA 1 cut(s) 663
BpuEI CTTGAG 2 cut(s) 98, 549
BpuMI CCSGG 1 cut(s) 1238
BsaBI GATNNNNATC 1 cut(s) 1214
BsaHI GRCGYC 3 cut(s) 576, 839, 1257
BsaI GGTCTC 1 cut(s) 515
BsaJI CCNNGG 2 cut(s) 143, 1297
BsaWI WCCGGW 2 cut(s) 557, 602
BsaXI ACNNNNNCTCC 2 cut(s) 1417, 1447
Bsc4I CCNNNNNNNGG 6 cut(s) 144, 410, 712, 831, 1237, 1484
Bse118I RCCGGY 1 cut(s) 623
Bse1I ACTGG 2 cut(s) 371, 449
Bse21I CCTNAGG 1 cut(s) 744
Bse3DI GCAATG 1 cut(s) 507
Bse8I GATNNNNATC 1 cut(s) 1214
BseAI TCCGGA 1 cut(s) 602
BseBI CCWGG 1 cut(s) 995
BseDI CCNNGG 2 cut(s) 143, 1297
BseGI GGATG 4 cut(s) 136, 916, 1097, 1293
BseJI GATNNNNATC 1 cut(s) 1214
BseLI CCNNNNNNNGG 6 cut(s) 144, 410, 712, 831, 1237, 1484
BseMI GCAATG 1 cut(s) 507
BseMII CTCAG 3 cut(s) 155, 288, 1463
BseNI ACTGG 2 cut(s) 371, 449
BseRI GAGGAG 1 cut(s) 1034
Bsh1236I CGCG 2 cut(s) 32, 393
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 7 cut(s) 420, 651, 761, 986, 1241, 1477, 1488
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 2 cut(s) 565, 1467
BsiSI CCGG 5 cut(s) 558, 603, 624, 1238, 1274
BslFI GGGAC 2 cut(s) 120, 307
BslI CCNNNNNNNGG 6 cut(s) 144, 410, 712, 831, 1237, 1484
BsmAI GTCTC 3 cut(s) 515, 600, 938
BsmFI GGGAC 2 cut(s) 120, 307
BsnI GGCC 7 cut(s) 420, 651, 761, 986, 1241, 1477, 1488
Bso31I GGTCTC 1 cut(s) 515
Bsp119I TTCGAA 1 cut(s) 663
Bsp1286I GDGCHC 3 cut(s) 403, 565, 1467
Bsp13I TCCGGA 1 cut(s) 602
Bsp1407I TGTACA 1 cut(s) 309
Bsp143I GATC 3 cut(s) 33, 319, 674
Bsp68I TCGCGA 1 cut(s) 32
BspACI CCGC 6 cut(s) 347, 380, 457, 652, 842, 1302
BspANI GGCC 7 cut(s) 420, 651, 761, 986, 1241, 1477, 1488
BspCNI CTCAG 3 cut(s) 156, 289, 1464
BspEI TCCGGA 1 cut(s) 602
BspFNI CGCG 2 cut(s) 32, 393
BspHI TCATGA 1 cut(s) 940
BspLI GGNNCC 1 cut(s) 136
BspMAI CTGCAG 1 cut(s) 65
BspMI ACCTGC 1 cut(s) 861
BspPI GGATC 2 cut(s) 314, 669
BspT104I TTCGAA 1 cut(s) 663
BspTI CTTAAG 1 cut(s) 869
BspTNI GGTCTC 1 cut(s) 515
BsrDI GCAATG 1 cut(s) 507
BsrFI RCCGGY 1 cut(s) 623
BsrGI TGTACA 1 cut(s) 309
BsrI ACTGG 2 cut(s) 371, 449
BssAI RCCGGY 1 cut(s) 623
BssECI CCNNGG 2 cut(s) 143, 1297
BssMI GATC 3 cut(s) 33, 319, 674
BssNI GRCGYC 3 cut(s) 576, 839, 1257
BssT1I CCWWGG 1 cut(s) 143
Bst2UI CCWGG 1 cut(s) 995
Bst4CI ACNGT 1 cut(s) 342
Bst6I CTCTTC 1 cut(s) 698
BstACI GRCGYC 3 cut(s) 576, 839, 1257
BstAFI CTTAAG 1 cut(s) 869
BstAUI TGTACA 1 cut(s) 309
BstBI TTCGAA 1 cut(s) 663
BstC8I GCNNGC 7 cut(s) 254, 378, 508, 1149, 1226, 1310, 1490
BstDEI CTNAG 5 cut(s) 164, 297, 671, 744, 1472
BstDSI CCRYGG 1 cut(s) 1297
BstENI CCTNNNNNAGG 1 cut(s) 142
BstF5I GGATG 4 cut(s) 136, 916, 1097, 1293
BstFNI CGCG 2 cut(s) 32, 393
BstKTI GATC 3 cut(s) 36, 322, 677
BstMAI GTCTC 3 cut(s) 515, 600, 938
BstMBI GATC 3 cut(s) 33, 319, 674
BstMCI CGRYCG 1 cut(s) 36
BstNI CCWGG 1 cut(s) 995
BstNSI RCATGY 3 cut(s) 1069, 1207, 1228
BstSCI CCNGG 2 cut(s) 993, 1236
BstSFI CTRYAG 1 cut(s) 61
BstUI CGCG 2 cut(s) 32, 393
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 2 cut(s) 319, 674
BstYI RGATCY 2 cut(s) 319, 674
Bsu36I CCTNAGG 1 cut(s) 744
BsuRI GGCC 7 cut(s) 420, 651, 761, 986, 1241, 1477, 1488
BtgI CCRYGG 1 cut(s) 1297
BtgZI GCGATG 2 cut(s) 13, 598
BtsCI GGATG 4 cut(s) 136, 916, 1097, 1293
BtsI GCAGTG 1 cut(s) 851
BtsIMutI CAGTG 1 cut(s) 851
BtuMI TCGCGA 1 cut(s) 32
BveI ACCTGC 1 cut(s) 861
Cac8I GCNNGC 7 cut(s) 254, 378, 508, 1149, 1226, 1310, 1490
CciI TCATGA 1 cut(s) 940
Cfr10I RCCGGY 1 cut(s) 623
Cfr13I GGNCC 2 cut(s) 134, 1240
CseI GACGC 2 cut(s) 399, 847
Csp6I GTAC 3 cut(s) 310, 1324, 1384
CspCI CAANNNNNGTGG 2 cut(s) 980, 1015
CviQI GTAC 3 cut(s) 310, 1324, 1384
DdeI CTNAG 5 cut(s) 164, 297, 671, 744, 1472
DpnI GATC 3 cut(s) 35, 321, 676
DpnII GATC 3 cut(s) 33, 319, 674
DriI GACNNNNNGTC 1 cut(s) 1180
EaeI YGGCCR 2 cut(s) 649, 984
Eam1104I CTCTTC 1 cut(s) 698
Eam1105I GACNNNNNGTC 1 cut(s) 1180
EarI CTCTTC 1 cut(s) 698
Ecl136II GAGCTC 1 cut(s) 1465
Eco130I CCWWGG 1 cut(s) 143
Eco147I AGGCCT 1 cut(s) 1477
Eco24I GRGCYC 2 cut(s) 403, 1467
Eco31I GGTCTC 1 cut(s) 515
Eco47I GGWCC 1 cut(s) 134
Eco53kI GAGCTC 1 cut(s) 1465
Eco81I CCTNAGG 1 cut(s) 744
EcoICRI GAGCTC 1 cut(s) 1465
EcoNI CCTNNNNNAGG 1 cut(s) 142
EcoRII CCWGG 1 cut(s) 993
EcoT14I CCWWGG 1 cut(s) 143
EcoT38I GRGCYC 2 cut(s) 403, 1467
ErhI CCWWGG 1 cut(s) 143
FalI AAGNNNNNCTT 2 cut(s) 611, 643
FaqI GGGAC 2 cut(s) 120, 307
FauI CCCGC 1 cut(s) 1295
FblI GTMKAC 1 cut(s) 836
Fnu4HI GCNGC 2 cut(s) 652, 842
FokI GGATG 4 cut(s) 143, 923, 1104, 1280
FriOI GRGCYC 2 cut(s) 403, 1467
Fsp4HI GCNGC 2 cut(s) 652, 842
FspBI CTAG 7 cut(s) 17, 422, 539, 656, 1413, 1496, 1513
GluI GCNGC 2 cut(s) 652, 842
GsuI CTGGAG 1 cut(s) 1487
HaeIII GGCC 7 cut(s) 420, 651, 761, 986, 1241, 1477, 1488
HapII CCGG 5 cut(s) 558, 603, 624, 1238, 1274
HgaI GACGC 2 cut(s) 399, 847
Hin1I GRCGYC 3 cut(s) 576, 839, 1257
HincII GTYRAC 2 cut(s) 837, 1261
HindII GTYRAC 2 cut(s) 837, 1261
HinfI GANTC 1 cut(s) 554
HpaII CCGG 5 cut(s) 558, 603, 624, 1238, 1274
HphI GGTGA 4 cut(s) 364, 446, 1108, 1122
Hpy166II GTNNAC 4 cut(s) 837, 881, 1063, 1261
Hpy188III TCNNGA 7 cut(s) 31, 115, 323, 566, 580, 603, 941
Hpy8I GTNNAC 4 cut(s) 837, 881, 1063, 1261
Hpy99I CGWCG 5 cut(s) 393, 578, 581, 841, 1223
HpyAV CCTTC 5 cut(s) 428, 490, 1134, 1464, 1488
HpyCH4III ACNGT 1 cut(s) 342
HpyCH4IV ACGT 3 cut(s) 275, 576, 1257
HpyF3I CTNAG 5 cut(s) 164, 297, 671, 744, 1472
HpySE526I ACGT 3 cut(s) 275, 576, 1257
Hsp92I GRCGYC 3 cut(s) 576, 839, 1257
Kpn2I TCCGGA 1 cut(s) 602
Kzo9I GATC 3 cut(s) 33, 319, 674
LweI GCATC 1 cut(s) 642
MaeI CTAG 7 cut(s) 17, 422, 539, 656, 1413, 1496, 1513
MaeII ACGT 3 cut(s) 275, 576, 1257
MaeIII GTNAC 2 cut(s) 352, 452
MalI GATC 3 cut(s) 35, 321, 676
MboI GATC 3 cut(s) 33, 319, 674
MboII GAAGA 4 cut(s) 5, 193, 685, 1096
MfeI CAATTG 3 cut(s) 544, 788, 1010
MflI RGATCY 2 cut(s) 319, 674
MhlI GDGCHC 3 cut(s) 403, 565, 1467
MlsI TGGCCA 1 cut(s) 986
MluCI AATT 8 cut(s) 93, 190, 544, 732, 788, 1010, 1053, 1404
MluNI TGGCCA 1 cut(s) 986
MmeI TCCRAC 4 cut(s) 108, 412, 1018, 1460
Mox20I TGGCCA 1 cut(s) 986
MroI TCCGGA 1 cut(s) 602
MroXI GAANNNNTTC 1 cut(s) 9
MscI TGGCCA 1 cut(s) 986
MseI TTAA 4 cut(s) 68, 480, 512, 870
MslI CAYNNNNRTG 3 cut(s) 459, 533, 1166
Msp20I TGGCCA 1 cut(s) 986
MspA1I CMGCKG 1 cut(s) 380
MspCI CTTAAG 1 cut(s) 869
MspI CCGG 5 cut(s) 558, 603, 624, 1238, 1274
MspR9I CCNGG 2 cut(s) 995, 1238
MunI CAATTG 3 cut(s) 544, 788, 1010
MvaI CCWGG 1 cut(s) 995
MvnI CGCG 2 cut(s) 32, 393
NciI CCSGG 1 cut(s) 1238
NdeII GATC 3 cut(s) 33, 319, 674
NlaIV GGNNCC 1 cut(s) 136
NmuCI GTSAC 2 cut(s) 352, 452
NruI TCGCGA 1 cut(s) 32
NspI RCATGY 3 cut(s) 1069, 1207, 1228
NspV TTCGAA 1 cut(s) 663
PaeI GCATGC 1 cut(s) 1228
PagI TCATGA 1 cut(s) 940
PceI AGGCCT 1 cut(s) 1477
PciI ACATGT 1 cut(s) 1203
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 1 cut(s) 554
PflFI GACNNNGTC 1 cut(s) 1217
PkrI GCNGC 2 cut(s) 653, 843
Ple19I CGATCG 1 cut(s) 36
PscI ACATGT 1 cut(s) 1203
PshBI ATTAAT 1 cut(s) 68
Psp124BI GAGCTC 1 cut(s) 1467
Psp6I CCWGG 1 cut(s) 993
PspGI CCWGG 1 cut(s) 993
PspN4I GGNNCC 1 cut(s) 136
PspPI GGNCC 2 cut(s) 134, 1240
PstI CTGCAG 1 cut(s) 65
PsuI RGATCY 2 cut(s) 319, 674
PsyI GACNNNGTC 1 cut(s) 1217
PvuI CGATCG 1 cut(s) 36
RruI TCGCGA 1 cut(s) 32
RsaI GTAC 3 cut(s) 311, 1325, 1385
RsaNI GTAC 3 cut(s) 310, 1324, 1384
RseI CAYNNNNRTG 3 cut(s) 459, 533, 1166
SacI GAGCTC 1 cut(s) 1467
SalI GTCGAC 1 cut(s) 835
SaqAI TTAA 4 cut(s) 68, 480, 512, 870
SatI GCNGC 2 cut(s) 652, 842
Sau3AI GATC 3 cut(s) 33, 319, 674
Sau96I GGNCC 2 cut(s) 134, 1240
ScrFI CCNGG 2 cut(s) 995, 1238
SduI GDGCHC 3 cut(s) 403, 565, 1467
SfaNI GCATC 1 cut(s) 642
SfcI CTRYAG 1 cut(s) 61
SfuI TTCGAA 1 cut(s) 663
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 3 cut(s) 459, 533, 1166
SmlI CTYRAG 3 cut(s) 113, 564, 869
SmoI CTYRAG 3 cut(s) 113, 564, 869
SphI GCATGC 1 cut(s) 1228
Sse9I AATT 8 cut(s) 93, 190, 544, 732, 788, 1010, 1053, 1404
SseBI AGGCCT 1 cut(s) 1477
SsiI CCGC 6 cut(s) 347, 380, 457, 652, 842, 1302
SspI AATATT 1 cut(s) 72
SspMI CTAG 7 cut(s) 17, 422, 539, 656, 1413, 1496, 1513
SstI GAGCTC 1 cut(s) 1467
StuI AGGCCT 1 cut(s) 1477
StyD4I CCNGG 2 cut(s) 993, 1236
StyI CCWWGG 1 cut(s) 143
TaaI ACNGT 1 cut(s) 342
TaiI ACGT 3 cut(s) 278, 579, 1260
TaqI TCGA 5 cut(s) 573, 579, 663, 836, 1363
TasI AATT 8 cut(s) 93, 190, 544, 732, 788, 1010, 1053, 1404
TatI WGTACW 2 cut(s) 309, 1383
TauI GCSGC 2 cut(s) 654, 844
TfiI GAWTC 1 cut(s) 554
Tru1I TTAA 4 cut(s) 68, 480, 512, 870
Tru9I TTAA 4 cut(s) 68, 480, 512, 870
TscAI CASTG 1 cut(s) 851
TseFI GTSAC 2 cut(s) 352, 452
Tsp45I GTSAC 2 cut(s) 352, 452
TspDTI ATGAA 5 cut(s) 188, 1115, 1116, 1119, 1154
TspGWI ACGGA 1 cut(s) 1447
TspRI CASTG 1 cut(s) 851
Tth111I GACNNNGTC 1 cut(s) 1217
Vha464I CTTAAG 1 cut(s) 869
VpaK11BI GGWCC 1 cut(s) 134
VspI ATTAAT 1 cut(s) 68
XagI CCTNNNNNAGG 1 cut(s) 142
XceI RCATGY 3 cut(s) 1069, 1207, 1228
XmiI GTMKAC 1 cut(s) 836
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 7 cut(s) 17, 422, 539, 656, 1413, 1496, 1513
ZraI GACGTC 2 cut(s) 577, 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.