MD03G1052200.v1.1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000851
Physical Location & Seq
Reverse (-)
4161673 .. 4165465
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1052200.v1.1.491

Sequence Viewer

Length: 2442 bp
ATGGACCCAGACGTCGACGTTTCGCGGTGGGTCATCGAGCTCCTTCTTCGGGACCGCGAGAAGGATTGCATTGCCAAGAGGCTCCTCGCAGTCGCACCCTTCTCGGACCAAGACTATCGCTTGAAGAAGACCGTACTCCTCCGGACGATCGAGTGCGAAGTCTACGAAGCTTCGGTCTCCGAAACGATCCTCGAAACGCTTGAAATGATTGAGGATTTGGATATCAGAGAAGGCATTGCCACCACGGAATCCATGAAAGCGGCCTACTGCTCGGTGGCCACTGAGTGTACGGTCAAGTTCTTAGTGGGTTTTATGGGAAAGCCTAGTGAGAAGTACTTGGAGGCCGTGGATCGGATTTGGAGAGGGAGGGTTGGGGTTTTGGAGCGGTCTGGGAGGAGCCAGTTGGTATCTACGGAGTTGAGGCATCGAATGGAGGAGATCGAGGCAGGGGTTTGGGATTTGAGAGTGTCGAAGAAGTTGTCGAGGATGAACACGAGGAATGATGCGCTGAGATCGGTTTCGGTTTATGTAAAGGAAGCTTTGGCGTTGTTAGGACCTCCGTTTATTTCTTGGGCTATTAGATTGAATGTGCCCATGGAAGTAGCCGACTTGGAAGCTGATCACATTGCAGTGGTCAATGAGGCTAATGTGGGTGGTGGGTCTGAATTCGAAGGGCAAATGGAGAAGGGGGCTAATGCAGGTAACGGGCCTGAATTGGAGGTACAAATGGCGAATGGGGCTAATGCGGGGGAAGGTTGTTCTGACTTGGAGGCTCAAATGGCGAATGGTGCTAATGAGGGTGATGGTGGGTCTGAATTGGAAACTCAAATAGCGAATAGGGCTAATGTCGGTGGTGGTGGGTCTGAATTGAAGGCTCAACTGCGGGATGAGGTAAATGTGGGGCCCAGTGGGTCGGAGTTAGAAGCTGAAGTGGTGAGGGTGACTAATGCGGGTGGTCGGTCCGATATGGAGGTGCAAATGGAGAATGGGACTGGTGTGGGTGATAAGTCTGAATTGGAGGAGCAAATGGTTAATGGGACTAATGTGGGTCACGGGTTCCAGTTGGAGGAGCAAACTAAGAATGGGAGTAATGTGGCCGGTCACTCTGAATTGGAGGCACAAATGGTGGGTAGAGGTAGAGCTAATGTGGTCGATGGGTCTGAGCCAGAAGCACAAACTGGTAATGGGACTAATGAGAGTATTGGGTCTCAAAGGCATGCACAAACTACGAATGGGTCTAATGTGGGTAGTCAGTCTGAATTGGAGGCGCAGCCAGTGAATGGGACTAATGTACGTGATGGGTGTACATATGAGGGGCAAATGGTCAATGGGGATAATGTTAGCAATGGGTCTGAATTGGGTCCTATATTGGTTGCAGTCCCATTGAAGGAAGTTCGGGCAGGGAGCTCGCTGCCTACTGTGAGCCGGGGCTTGGTTTTGAATGATTTGGTTGAAATAGATTCTGGATTCAGAAACAGAGAAGTACACAGGTCGGCAGATGATCAGGCTCCTGGTCAAGTGAATGAGACAGGCTTGGCTATACCTAGTCGGAATGGGGAACTGGGTCTCAATATTGACCATACCACGAAAGATAAAGAAAGTCAGAGGTCTACTATGCCTAGACGCAAGCACCTTGCTCATAGACGCACCAGAGGACCGATTAGGATTAGGGACGCTGAAGATTTAGGCACAGATGTATCAGATAGAAAATATGGTTCCTTAGATACCCCTGAAGTTAACAGAGCACAAGAAGCACTTAAATCCAGTATTTCGGAGCTCCAAGAATTAGTGACAGATCCACTTCCAGATGCCTTGCGAGTGTCTGAAACCGTAAGATCTAGTTTGGCAATGAGATCTGTAAATCATGTAAATGGAAAAGATGTAGGTGCAGAAAATCCATCTATCGAGAAGGGTGCCGAGCCTGTTCAATCTAATAATGATAATGTTGGAAATCTGCCATCCAGACATCAGAATGATCCTCAATCTAGTGGAATAGAAAAGGATGTTCCAAATCCGCCTGTTGACCAGGGAGGCACTGAGTCTGTTCAAACTGATGCTGCCAATCTTAGAAATCCTTCTTTCAGTAATCAGAATAACGTTGCTCGTCCTAGCTTGGTGGAACGTAATAGTACTGCCCGTACTTTCGAGTGGGAGGAATCAATAAATACGTCACAAGAAGGAACAAAGAAAGATGCGGGCATGCTTCACCTTCCTAGCCCAAAGAGGACTGCTGTATCTCCTTTGAAGAAGTACGAGGATACGAGATTTAGTAAGAGAAGAAAAGTTAAAAGATGGAGCTTATTGGAAGAAGACACCTTAAGGACTGGTGTACAGAAGTATGGAGAAGGAAGCTGGAGCCTTATCTTGAAAAGCTACTCTGATATATTCAAAGAGAGGACTCAGGTTGATCTAAAGGACAAATGGAGAAATATGAAAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

814

Amino Acids

88.66

Weight (kDa)

5.06

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 764 - 812 2.3e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 11
AatII GACGTC 1 cut(s) 15
Acc36I ACCTGC 1 cut(s) 689
AccB1I GGYRCC 1 cut(s) 1913
AccB7I CCANNNNNTGG 1 cut(s) 1280
AccBSI CCGCTC 1 cut(s) 385
AccI GTMKAC 3 cut(s) 15, 162, 1610
AccII CGCG 2 cut(s) 25, 57
AccIII TCCGGA 1 cut(s) 141
AciI CCGC 9 cut(s) 25, 55, 260, 385, 746, 883, 950, 2015, 2195
AclI AACGTT 1 cut(s) 2097
AclWI GGATC 4 cut(s) 181, 357, 1790, 1970
AcoI YGGCCR 2 cut(s) 276, 1095
AcsI RAATTY 1 cut(s) 665
AcuI CTGAAG 3 cut(s) 948, 1698, 1752
AcyI GRCGYC 1 cut(s) 12
AdeI CACNNNGTG 1 cut(s) 285
AfiI CCNNNNNNNGG 7 cut(s) 49, 61, 351, 1066, 1280, 1387, 1432
AflII CTTAAG 1 cut(s) 2317
AjnI CCWGG 2 cut(s) 1510, 2025
Alw21I GWGCWC 4 cut(s) 42, 1409, 1747, 1779
Alw26I GTCTC 4 cut(s) 181, 1212, 1520, 1571
AlwI GGATC 4 cut(s) 181, 357, 1790, 1970
Aor13HI TCCGGA 1 cut(s) 141
AoxI GGCC 6 cut(s) 261, 276, 342, 707, 902, 1095
ApaI GGGCCC 1 cut(s) 906
ApeKI GCWGC 3 cut(s) 1270, 1411, 2057
ApoI RAATTY 1 cut(s) 665
ArsI GACNNNNNNTTYG 4 cut(s) 159, 191, 464, 496
Asp700I GAANNNNTTC 1 cut(s) 2074
AspLEI GCGC 2 cut(s) 508, 1270
AsuC2I CCSGG 1 cut(s) 1427
AsuHPI GGTGA 5 cut(s) 812, 946, 952, 1013, 2198
AsuII TTCGAA 1 cut(s) 669
AvaII GGWCC 7 cut(s) 4, 52, 106, 554, 960, 1361, 1655
BaeGI GKGCMC 2 cut(s) 594, 906
BaeI ACNNNNGTAYC 4 cut(s) 1680, 1713, 2217, 2250
BalI TGGCCA 1 cut(s) 278
BanI GGYRCC 1 cut(s) 1913
BanII GRGCYC 4 cut(s) 42, 906, 1409, 1779
BauI CACGAG 1 cut(s) 493
BbsI GAAGAC 2 cut(s) 134, 2316
Bbv12I GWGCWC 4 cut(s) 42, 1409, 1747, 1779
BbvI GCAGC 3 cut(s) 1282, 1398, 2044
BccI CCATC 6 cut(s) 797, 1148, 1292, 1906, 1966, 2286
BceAI ACGGC 1 cut(s) 329
BcgI CGANNNNNNTGC 6 cut(s) 84, 118, 1389, 1423, 1895, 1929
BciT130I CCWGG 2 cut(s) 1512, 2027
BciVI GTATCC 1 cut(s) 2251
BclI TGATCA 2 cut(s) 619, 1501
BcnI CCSGG 1 cut(s) 1427
BcoDI GTCTC 4 cut(s) 181, 1212, 1520, 1571
BfaI CTAG 7 cut(s) 324, 1545, 1620, 1839, 1986, 2109, 2214
BfrI CTTAAG 1 cut(s) 2317
BfuAI ACCTGC 1 cut(s) 689
BfuI GTATCC 1 cut(s) 2251
BglII AGATCT 2 cut(s) 1835, 1853
BisI GCNGC 4 cut(s) 261, 1271, 1412, 2058
BlsI GCNGC 4 cut(s) 262, 1272, 1413, 2059
BmcAI AGTACT 2 cut(s) 335, 2131
Bme1390I CCNGG 3 cut(s) 1427, 1512, 2027
Bme18I GGWCC 7 cut(s) 4, 52, 106, 554, 960, 1361, 1655
BmrFI CCNGG 3 cut(s) 1427, 1512, 2027
BmrI ACTGGG 2 cut(s) 900, 1571
BmsI GCATC 5 cut(s) 433, 493, 1798, 2044, 2182
BmuI ACTGGG 2 cut(s) 900, 1571
BpiI GAAGAC 2 cut(s) 134, 2316
BpmI CTGGAG 1 cut(s) 2374
Bpu14I TTCGAA 1 cut(s) 669
BpuMI CCSGG 1 cut(s) 1427
BsaAI YACGTR 1 cut(s) 1295
BsaHI GRCGYC 1 cut(s) 12
BsaI GGTCTC 3 cut(s) 181, 1212, 1571
BsaJI CCNNGG 5 cut(s) 243, 345, 594, 1426, 2026
BsaWI WCCGGW 1 cut(s) 141
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 61, 351, 1066, 1280, 1387, 1432
Bse118I RCCGGY 1 cut(s) 1097
Bse1I ACTGG 9 cut(s) 400, 906, 997, 1060, 1183, 1274, 1566, 1764, 2329
Bse3DI GCAATG 5 cut(s) 69, 234, 624, 1351, 1854
BseAI TCCGGA 1 cut(s) 141
BseBI CCWGG 2 cut(s) 1512, 2027
BseDI CCNNGG 5 cut(s) 243, 345, 594, 1426, 2026
BseGI GGATG 4 cut(s) 492, 892, 1958, 2008
BseLI CCNNNNNNNGG 7 cut(s) 49, 61, 351, 1066, 1280, 1387, 1432
BseMI GCAATG 5 cut(s) 69, 234, 624, 1351, 1854
BseMII CTCAG 5 cut(s) 273, 500, 1152, 2028, 2414
BseNI ACTGG 9 cut(s) 400, 906, 997, 1060, 1183, 1274, 1566, 1764, 2329
BseRI GAGGAG 6 cut(s) 74, 128, 409, 449, 1034, 1082
BseSI GKGCMC 2 cut(s) 594, 906
BseXI GCAGC 3 cut(s) 1282, 1398, 2044
BsgI GTGCAG 1 cut(s) 1908
Bsh1236I CGCG 2 cut(s) 25, 57
Bsh1285I CGRYCG 1 cut(s) 150
BshFI GGCC 6 cut(s) 263, 278, 344, 709, 904, 1097
BshNI GGYRCC 1 cut(s) 1913
BsiEI CGRYCG 1 cut(s) 150
BsiHKAI GWGCWC 4 cut(s) 42, 1409, 1747, 1779
BsiSI CCGG 3 cut(s) 142, 1098, 1426
BslFI GGGAC 7 cut(s) 65, 1003, 1051, 1201, 1297, 1364, 1685
BslI CCNNNNNNNGG 7 cut(s) 49, 61, 351, 1066, 1280, 1387, 1432
BsmAI GTCTC 4 cut(s) 181, 1212, 1520, 1571
BsmFI GGGAC 7 cut(s) 65, 1003, 1051, 1201, 1297, 1364, 1685
BsnI GGCC 6 cut(s) 263, 278, 344, 709, 904, 1097
Bso31I GGTCTC 3 cut(s) 181, 1212, 1571
Bsp119I TTCGAA 1 cut(s) 669
Bsp120I GGGCCC 1 cut(s) 902
Bsp1286I GDGCHC 6 cut(s) 42, 594, 906, 1409, 1747, 1779
Bsp13I TCCGGA 1 cut(s) 141
Bsp1407I TGTACA 2 cut(s) 1304, 2329
Bsp19I CCATGG 1 cut(s) 594
BspACI CCGC 9 cut(s) 25, 55, 260, 385, 746, 883, 950, 2015, 2195
BspANI GGCC 6 cut(s) 263, 278, 344, 709, 904, 1097
BspCNI CTCAG 5 cut(s) 274, 501, 1153, 2029, 2413
BspEI TCCGGA 1 cut(s) 141
BspFNI CGCG 2 cut(s) 25, 57
BspMI ACCTGC 1 cut(s) 689
BspPI GGATC 4 cut(s) 181, 357, 1790, 1970
BspT104I TTCGAA 1 cut(s) 669
BspT107I GGYRCC 1 cut(s) 1913
BspTI CTTAAG 1 cut(s) 2317
BspTNI GGTCTC 3 cut(s) 181, 1212, 1571
BsrBI CCGCTC 1 cut(s) 385
BsrDI GCAATG 5 cut(s) 69, 234, 624, 1351, 1854
BsrFI RCCGGY 1 cut(s) 1097
BsrGI TGTACA 2 cut(s) 1304, 2329
BsrI ACTGG 9 cut(s) 400, 906, 997, 1060, 1183, 1274, 1566, 1764, 2329
BssAI RCCGGY 1 cut(s) 1097
BssECI CCNNGG 5 cut(s) 243, 345, 594, 1426, 2026
BssNI GRCGYC 1 cut(s) 12
BssSI CACGAG 1 cut(s) 493
BssT1I CCWWGG 1 cut(s) 594
Bst2BI CACGAG 1 cut(s) 493
Bst2UI CCWGG 2 cut(s) 1512, 2027
Bst4CI ACNGT 4 cut(s) 133, 292, 1420, 1831
BstACI GRCGYC 1 cut(s) 12
BstAFI CTTAAG 1 cut(s) 2317
BstAUI TGTACA 2 cut(s) 1304, 2329
BstBAI YACGTR 1 cut(s) 1295
BstBI TTCGAA 1 cut(s) 669
BstC8I GCNNGC 5 cut(s) 1218, 1409, 1628, 2197, 2201
BstDEI CTNAG 9 cut(s) 282, 301, 509, 1077, 1161, 1720, 2037, 2066, 2400
BstDSI CCRYGG 3 cut(s) 243, 345, 594
BstF5I GGATG 4 cut(s) 492, 892, 1958, 2008
BstFNI CGCG 2 cut(s) 25, 57
BstHHI GCGC 2 cut(s) 508, 1270
BstMAI GTCTC 4 cut(s) 181, 1212, 1520, 1571
BstMCI CGRYCG 1 cut(s) 150
BstMWI GCNNNNNNNGC 5 cut(s) 737, 779, 788, 839, 1751
BstNI CCWGG 2 cut(s) 1512, 2027
BstNSI RCATGY 2 cut(s) 1220, 2203
BstSCI CCNGG 3 cut(s) 1425, 1510, 2025
BstSLI GKGCMC 2 cut(s) 594, 906
BstUI CGCG 2 cut(s) 25, 57
BstV1I GCAGC 3 cut(s) 1282, 1398, 2044
BstV2I GAAGAC 2 cut(s) 134, 2316
BstX2I RGATCY 3 cut(s) 1795, 1835, 1853
BstYI RGATCY 3 cut(s) 1795, 1835, 1853
BsuI GTATCC 1 cut(s) 2251
BsuRI GGCC 6 cut(s) 263, 278, 344, 709, 904, 1097
BtgI CCRYGG 3 cut(s) 243, 345, 594
BtsCI GGATG 4 cut(s) 492, 892, 1958, 2008
BtsI GCAGTG 1 cut(s) 636
BtsIMutI CAGTG 5 cut(s) 279, 636, 913, 1281, 2034
BveI ACCTGC 1 cut(s) 689
Cac8I GCNNGC 5 cut(s) 1218, 1409, 1628, 2197, 2201
CfoI GCGC 2 cut(s) 508, 1270
Cfr10I RCCGGY 1 cut(s) 1097
CpoI CGGWCCG 1 cut(s) 960
CseI GACGC 3 cut(s) 1632, 1653, 1682
CspI CGGWCCG 1 cut(s) 960
CviAII CATG 5 cut(s) 253, 595, 1217, 1865, 2200
DdeI CTNAG 9 cut(s) 282, 301, 509, 1077, 1161, 1720, 2037, 2066, 2400
DraIII CACNNNGTG 1 cut(s) 285
DrdI GACNNNNNNGTC 1 cut(s) 11
DseDI GACNNNNNNGTC 1 cut(s) 11
EaeI YGGCCR 2 cut(s) 276, 1095
EciI GGCGGA 1 cut(s) 2004
Ecl136II GAGCTC 3 cut(s) 40, 1407, 1777
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 4 cut(s) 42, 906, 1409, 1779
Eco31I GGTCTC 3 cut(s) 181, 1212, 1571
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 7 cut(s) 4, 52, 106, 554, 960, 1361, 1655
Eco53kI GAGCTC 3 cut(s) 40, 1407, 1777
Eco57I CTGAAG 3 cut(s) 948, 1698, 1752
EcoICRI GAGCTC 3 cut(s) 40, 1407, 1777
EcoO109I RGGNCCY 3 cut(s) 554, 902, 1361
EcoRI GAATTC 1 cut(s) 665
EcoRII CCWGG 2 cut(s) 1510, 2025
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 594
EcoT38I GRGCYC 4 cut(s) 42, 906, 1409, 1779
ErhI CCWWGG 1 cut(s) 594
FaeI CATG 5 cut(s) 256, 598, 1220, 1868, 2203
FalI AAGNNNNNCTT 2 cut(s) 1740, 1772
FaqI GGGAC 7 cut(s) 65, 1003, 1051, 1201, 1297, 1364, 1685
FatI CATG 5 cut(s) 252, 594, 1216, 1864, 2199
FauI CCCGC 4 cut(s) 739, 876, 943, 2188
FauNDI CATATG 1 cut(s) 1309
FbaI TGATCA 2 cut(s) 619, 1501
FblI GTMKAC 3 cut(s) 15, 162, 1610
Fnu4HI GCNGC 4 cut(s) 261, 1271, 1412, 2058
FokI GGATG 4 cut(s) 499, 899, 1945, 2015
FriOI GRGCYC 4 cut(s) 42, 906, 1409, 1779
Fsp4HI GCNGC 4 cut(s) 261, 1271, 1412, 2058
FspBI CTAG 7 cut(s) 324, 1545, 1620, 1839, 1986, 2109, 2214
GlaI GCGC 2 cut(s) 507, 1269
GluI GCNGC 4 cut(s) 261, 1271, 1412, 2058
GsuI CTGGAG 1 cut(s) 2374
HaeIII GGCC 6 cut(s) 263, 278, 344, 709, 904, 1097
HapII CCGG 3 cut(s) 142, 1098, 1426
HgaI GACGC 3 cut(s) 1632, 1653, 1682
HhaI GCGC 2 cut(s) 508, 1270
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 5 cut(s) 256, 598, 1220, 1868, 2203
Hin6I GCGC 2 cut(s) 506, 1268
HinP1I GCGC 2 cut(s) 506, 1268
HincII GTYRAC 3 cut(s) 16, 1738, 2023
HindII GTYRAC 3 cut(s) 16, 1738, 2023
HindIII AAGCTT 2 cut(s) 168, 537
HinfI GANTC 6 cut(s) 248, 1460, 1467, 2039, 2156, 2398
HpaI GTTAAC 1 cut(s) 1738
HpaII CCGG 3 cut(s) 142, 1098, 1426
HphI GGTGA 5 cut(s) 812, 946, 952, 1013, 2198
Hpy166II GTNNAC 9 cut(s) 16, 163, 288, 1305, 1486, 1611, 1738, 2023, 2330
Hpy188III TCNNGA 7 cut(s) 50, 142, 1464, 1805, 1906, 1962, 2365
Hpy8I GTNNAC 9 cut(s) 16, 163, 288, 1305, 1486, 1611, 1738, 2023, 2330
Hpy99I CGWCG 2 cut(s) 17, 20
HpyCH4III ACNGT 4 cut(s) 133, 292, 1420, 1831
HpyCH4IV ACGT 6 cut(s) 12, 18, 1294, 2097, 2122, 2168
HpyCH4V TGCA 7 cut(s) 69, 629, 698, 976, 1220, 1376, 1889
HpyF10VI GCNNNNNNNGC 5 cut(s) 737, 779, 788, 839, 1751
HpyF3I CTNAG 9 cut(s) 282, 301, 509, 1077, 1161, 1720, 2037, 2066, 2400
HpySE526I ACGT 6 cut(s) 12, 18, 1294, 2097, 2122, 2168
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 5 cut(s) 256, 598, 1220, 1868, 2203
HspAI GCGC 2 cut(s) 506, 1268
Kpn2I TCCGGA 1 cut(s) 141
Ksp22I TGATCA 2 cut(s) 619, 1501
KspAI GTTAAC 1 cut(s) 1738
Lsp1109I GCAGC 3 cut(s) 1282, 1398, 2044
LweI GCATC 5 cut(s) 433, 493, 1798, 2044, 2182
MaeI CTAG 7 cut(s) 324, 1545, 1620, 1839, 1986, 2109, 2214
MaeII ACGT 6 cut(s) 12, 18, 1294, 2097, 2122, 2168
MaeIII GTNAC 6 cut(s) 701, 940, 1049, 1100, 1789, 2169
MbiI CCGCTC 1 cut(s) 385
MboII GAAGA 9 cut(s) 38, 136, 139, 484, 1691, 2257, 2289, 2318, 2321
MflI RGATCY 3 cut(s) 1795, 1835, 1853
MhlI GDGCHC 6 cut(s) 42, 594, 906, 1409, 1747, 1779
MlsI TGGCCA 1 cut(s) 278
MluCI AATT 9 cut(s) 665, 713, 815, 866, 1013, 1109, 1259, 1355, 1784
MluNI TGGCCA 1 cut(s) 278
MlyI GAGTC 2 cut(s) 2048, 2392
MmeI TCCRAC 4 cut(s) 894, 1044, 1529, 1927
Mox20I TGGCCA 1 cut(s) 278
MroI TCCGGA 1 cut(s) 141
MroXI GAANNNNTTC 1 cut(s) 2074
MscI TGGCCA 1 cut(s) 278
MseI TTAA 5 cut(s) 1032, 1737, 1758, 2286, 2318
MslI CAYNNNNRTG 3 cut(s) 629, 1869, 1971
Msp20I TGGCCA 1 cut(s) 278
MspCI CTTAAG 1 cut(s) 2317
MspI CCGG 3 cut(s) 142, 1098, 1426
MspR9I CCNGG 3 cut(s) 1427, 1512, 2027
MvaI CCWGG 2 cut(s) 1512, 2027
MvnI CGCG 2 cut(s) 25, 57
MwoI GCNNNNNNNGC 5 cut(s) 737, 779, 788, 839, 1751
NciI CCSGG 1 cut(s) 1427
NcoI CCATGG 1 cut(s) 594
NdeI CATATG 1 cut(s) 1309
NlaIII CATG 5 cut(s) 256, 598, 1220, 1868, 2203
NmeAIII GCCGAG 1 cut(s) 1942
NmuCI GTSAC 5 cut(s) 940, 1049, 1100, 1789, 2169
NspI RCATGY 2 cut(s) 1220, 2203
NspV TTCGAA 1 cut(s) 669
PaeI GCATGC 2 cut(s) 1220, 2203
PdmI GAANNNNTTC 1 cut(s) 2074
PfeI GAWTC 4 cut(s) 248, 1460, 1467, 2156
PflMI CCANNNNNTGG 1 cut(s) 1280
PkrI GCNGC 4 cut(s) 262, 1272, 1413, 2059
Ple19I CGATCG 1 cut(s) 150
PleI GAGTC 2 cut(s) 2047, 2392
PpsI GAGTC 2 cut(s) 2047, 2392
Ppu21I YACGTR 1 cut(s) 1295
PpuMI RGGWCCY 2 cut(s) 554, 1361
Psp124BI GAGCTC 3 cut(s) 42, 1409, 1779
Psp1406I AACGTT 1 cut(s) 2097
Psp5II RGGWCCY 2 cut(s) 554, 1361
Psp6I CCWGG 2 cut(s) 1510, 2025
PspGI CCWGG 2 cut(s) 1510, 2025
PspOMI GGGCCC 1 cut(s) 902
PspPPI RGGWCCY 2 cut(s) 554, 1361
PsuI RGATCY 3 cut(s) 1795, 1835, 1853
PvuI CGATCG 1 cut(s) 150
RseI CAYNNNNRTG 3 cut(s) 629, 1869, 1971
Rsr2I CGGWCCG 1 cut(s) 960
RsrII CGGWCCG 1 cut(s) 960
SacI GAGCTC 3 cut(s) 42, 1409, 1779
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 5 cut(s) 1032, 1737, 1758, 2286, 2318
SatI GCNGC 4 cut(s) 261, 1271, 1412, 2058
ScaI AGTACT 2 cut(s) 335, 2131
SchI GAGTC 2 cut(s) 2048, 2392
ScrFI CCNGG 3 cut(s) 1427, 1512, 2027
SduI GDGCHC 6 cut(s) 42, 594, 906, 1409, 1747, 1779
SfaNI GCATC 5 cut(s) 433, 493, 1798, 2044, 2182
SfuI TTCGAA 1 cut(s) 669
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 7 cut(s) 4, 52, 106, 554, 960, 1361, 1655
SmiMI CAYNNNNRTG 3 cut(s) 629, 1869, 1971
SmlI CTYRAG 1 cut(s) 2317
SmoI CTYRAG 1 cut(s) 2317
SphI GCATGC 2 cut(s) 1220, 2203
Sse9I AATT 9 cut(s) 665, 713, 815, 866, 1013, 1109, 1259, 1355, 1784
SsiI CCGC 9 cut(s) 25, 55, 260, 385, 746, 883, 950, 2015, 2195
SspI AATATT 1 cut(s) 1573
SspMI CTAG 7 cut(s) 324, 1545, 1620, 1839, 1986, 2109, 2214
SstI GAGCTC 3 cut(s) 42, 1409, 1779
StyD4I CCNGG 3 cut(s) 1425, 1510, 2025
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 4 cut(s) 133, 292, 1420, 1831
TaiI ACGT 6 cut(s) 15, 21, 1297, 2100, 2125, 2171
TaqII GACCGA 3 cut(s) 163, 948, 1672
TasI AATT 9 cut(s) 665, 713, 815, 866, 1013, 1109, 1259, 1355, 1784
TatI WGTACW 5 cut(s) 333, 1304, 1483, 2129, 2329
TauI GCSGC 1 cut(s) 263
TfiI GAWTC 4 cut(s) 248, 1460, 1467, 2156
Tru1I TTAA 5 cut(s) 1032, 1737, 1758, 2286, 2318
Tru9I TTAA 5 cut(s) 1032, 1737, 1758, 2286, 2318
TscAI CASTG 5 cut(s) 286, 636, 913, 1281, 2041
TseFI GTSAC 5 cut(s) 940, 1049, 1100, 1789, 2169
TseI GCWGC 3 cut(s) 1270, 1411, 2057
Tsp45I GTSAC 5 cut(s) 940, 1049, 1100, 1789, 2169
TspDTI ATGAA 2 cut(s) 269, 503
TspGWI ACGGA 3 cut(s) 260, 428, 549
TspRI CASTG 5 cut(s) 286, 636, 913, 1281, 2041
Van91I CCANNNNNTGG 1 cut(s) 1280
Vha464I CTTAAG 1 cut(s) 2317
VpaK11BI GGWCC 7 cut(s) 4, 52, 106, 554, 960, 1361, 1655
XapI RAATTY 1 cut(s) 665
XceI RCATGY 2 cut(s) 1220, 2203
XmiI GTMKAC 3 cut(s) 15, 162, 1610
XmnI GAANNNNTTC 1 cut(s) 2074
XspI CTAG 7 cut(s) 324, 1545, 1620, 1839, 1986, 2109, 2214
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 2 cut(s) 335, 2131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.