Rh5DG510900
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000851
Physical Location & Seq
Forward (+)
79793431 .. 79796757
3327 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG510900.1

Sequence Viewer

Length: 1992 bp
ATGGACTTAGACGTCGACGTTTCGCGGTGGGTTCTCGAGCTCCTCCTCCGCGACCGCGACAAGGAGAGCGTCGCGAAGCGAGTCCTCGCCGCCGTGCCGCTCTCGAACCAGGACTGGCGGTTGAAGAAGACCGTCCTCCTCCGAACGATCGAGTCCGAAGTCTTGGACGAGGCTTCGGTCACCGAAGCTATACTAGAGTCCTTGGAGTCGATCGAGGCTTTGGACCGCGGCCAAGGGATTCCGGTCACGGACTCCATGAGAGCGGCGTACTGCGCCGTGGCGACGGAGTGCACGGTGAAGTTTTTGATTTGCTTTGGAGGGAAGCCGAGCGGGAAGTACATGGAGGCGGTTGATCGGATTTGGAGAGGTAGGGTTAGGGTTTTGGAGGAGTCTGAGGGTTGCGAGCTGGTCTCGGGTGAGTTGAAGGAGAGAAGGGATGAGGTGGAGGCTGGGATTTGGGATGTGAAGGTTTCGAGGAAGCTAGCGAGCATGAATAGTAGAAATGATGCGCTGAGATTGGTTGCGGCGTATGTGAAGGAAGCTTTTGCGATGCTGGGTCCTCCGTTTATTGCTTGGGCTGTTAGGTTTAATATGCAGAAGGGAAGTTTAGGGTTGGAAGGTGATGAGGTTGCGGTGGAGAAGGATGGTAATGTGGGTGATGGGTGTGAAGTGCAGGTTCGAACGGCAAATGGGGCTGATTTGGAGGTGCGAAGGGCGAATGGGGTTGAGTTGGGTGATGGCTCCAAATTGGAGGAGAGTGGGGCTAATGTGCATGATGGGTCTGAATTGGAAGCGCAGAGAGGGGCAAATGTCAATTCTGGGTCTGAACAGGCCCAAAGGGCGAATGTGGTTACTGTTAATTCTGGGTCTGAACAAGAGGCACAAAGGGCTAATGGGGCTAATGTCAATTCTGGGTCTGAATTGGAGGCACAAAGAGTGAATGGGGCAAATGATGTTAGTGATAGGTCTGAACAGGAGTCGCAAAGGGTGAATGGGGCAAATGATGTTAGTGATAGGTCTGAACAGGAGGCACAAAGGGCGAATGGGGCTCATGTTAGTGACGCCTCTGAACAGGAGGCGCATGATACTAATGTTGTGGGGGCAGGGAGATCACAACGTAATGGACACCGTGGTGTCCTCAGCTTAGAACCTGCAACTAAAGAAAAAGAAACTCCAAGGAGCAGGGCACTTAGACGTAGGCATGGACCGGTTAAGATTAGAGATGCTGAAGATGTGGGTACGGAAGCATCAGCTGGCATATATAACTCAGTGTCTAGTGCTGAAGTTAGAAAAGTGCAAGAAGAACTTAAGTCCAGTGTTTTGGCTCTACAAGCTGTAGTGACAGACCCACTTCCCTATGCTTTGCAAGTGTCGGAAATTGTAAGATCTGAGTTAGGAATGAGAACTGTGGATCATGTAAGTGGAGAAAATGGAGGTGCAGCAAATCCATCTGTTGAAAAGAACTCTGAGCCTGATCAATCTAATAATGATAATCATGGAAACCAGACCAGTCATCAGAATGATGTTCCCCAACCAAGTGGAAAAGAAAATGATGCAACAAATCTGTCTGTCAACAAGGGTAAGGGCACAGAGTATGTTCGAACGGGTGATGTCAATCCTGGCAATCCGTCTTGCAGTTATCAGAATAATGTTTCCCGAGCTGGCTTGATGGAACGTAATAGTACTGCACATACTCTTGAGTGGGATGACTCGCTAGGTATGTCTCCTGAACGAACAAAGAGTAAGGGGAGGCTTCACCTACCTAGTCCAAAAAGGAACGCTGTTTCTCCACTGAAGAAGTATGAGGATAAAAGATTTTCTAAGAGGAGAAAAGTTAAGAGATGGAGCTTACATGAAGAAGATACGTTAAGGACTGGTGTGCAGAAGTATGGCAGAGGCAATTGGAAGTTTATCTTAGATACATACCGAGATGTATTTGAAGAGAGAACTGAGGTCGATCTGAAGGACAAGTGGAGAAACATGACGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

663

Amino Acids

72.9

Weight (kDa)

5.55

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 613 - 661 7.3e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 11
AatII GACGTC 1 cut(s) 15
Acc36I ACCTGC 2 cut(s) 664, 1159
AccBSI CCGCTC 3 cut(s) 100, 263, 330
AccI GTMKAC 1 cut(s) 15
AccII CGCG 5 cut(s) 25, 51, 57, 74, 228
AclWI GGATC 1 cut(s) 1419
AcoI YGGCCR 1 cut(s) 229
AcuI CTGAAG 4 cut(s) 1248, 1302, 1814, 1982
AcyI GRCGYC 2 cut(s) 12, 1062
AfaI GTAC 4 cut(s) 269, 338, 1240, 1684
AfiI CCNNNNNNNGG 1 cut(s) 61
AflII CTTAAG 1 cut(s) 1307
AgeI ACCGGT 1 cut(s) 1207
AgsI TTSAA 4 cut(s) 124, 424, 1457, 1940
AjnI CCWGG 2 cut(s) 108, 1618
AleI CACNNNNGTG 1 cut(s) 1131
Alw21I GWGCWC 2 cut(s) 42, 293
Alw26I GTCTC 2 cut(s) 415, 1728
Alw44I GTGCAC 1 cut(s) 289
AlwI GGATC 1 cut(s) 1419
Ama87I CYCGRG 3 cut(s) 35, 412, 1656
AoxI GGCC 2 cut(s) 229, 831
ApaLI GTGCAC 1 cut(s) 289
ApeKI GCWGC 1 cut(s) 1439
AsiGI ACCGGT 1 cut(s) 1207
AspLEI GCGC 4 cut(s) 275, 511, 796, 1081
AspS9I GGNCC 4 cut(s) 223, 557, 832, 1205
AsuHPI GGTGA 9 cut(s) 172, 307, 428, 632, 668, 746, 1000, 1619, 1748
AsuII TTCGAA 2 cut(s) 679, 1600
AsuNHI GCTAGC 1 cut(s) 481
AvaI CYCGRG 3 cut(s) 35, 412, 1656
AvaII GGWCC 3 cut(s) 223, 557, 1205
BaeGI GKGCMC 3 cut(s) 293, 1189, 1589
BaeI ACNNNNGTAYC 2 cut(s) 1077, 1110
BanII GRGCYC 2 cut(s) 42, 1051
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 2 cut(s) 42, 293
BbvCI CCTCAGC 1 cut(s) 1139
BbvI GCAGC 1 cut(s) 1451
BccI CCATC 7 cut(s) 638, 653, 731, 770, 1456, 1663, 1836
BceAI ACGGC 3 cut(s) 77, 260, 699
BciT130I CCWGG 2 cut(s) 110, 1620
BclI TGATCA 1 cut(s) 1474
BcoDI GTCTC 2 cut(s) 415, 1728
BfaI CTAG 5 cut(s) 194, 482, 1275, 1715, 1764
BfmI CTRYAG 1 cut(s) 1335
BfrI CTTAAG 1 cut(s) 1307
BfuAI ACCTGC 2 cut(s) 664, 1159
BglI GCCNNNNNGGC 1 cut(s) 839
BglII AGATCT 1 cut(s) 1385
BisI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1440
BlsI GCNGC 6 cut(s) 91, 99, 230, 265, 526, 1441
BmcAI AGTACT 1 cut(s) 1684
Bme1390I CCNGG 2 cut(s) 110, 1620
Bme18I GGWCC 3 cut(s) 223, 557, 1205
BmeT110I CYCGRG 3 cut(s) 35, 412, 1656
BmgT120I GGNCC 4 cut(s) 223, 557, 832, 1205
BmiI GGNNCC 2 cut(s) 558, 742
BmrFI CCNGG 2 cut(s) 110, 1620
BmsI GCATC 5 cut(s) 496, 540, 1213, 1256, 1543
BmtI GCTAGC 1 cut(s) 485
BpiI GAAGAC 1 cut(s) 134
BplI GAGNNNNNCTC 2 cut(s) 395, 427
Bpu10I CCTNAGC 1 cut(s) 1139
Bpu14I TTCGAA 2 cut(s) 679, 1600
BpuEI CTTGAG 1 cut(s) 1718
BsaBI GATNNNNATC 1 cut(s) 1614
BsaHI GRCGYC 2 cut(s) 12, 1062
BsaI GGTCTC 1 cut(s) 415
BsaJI CCNNGG 6 cut(s) 201, 226, 232, 276, 1129, 1175
BsaWI WCCGGW 2 cut(s) 241, 1207
Bsc4I CCNNNNNNNGG 1 cut(s) 61
Bse118I RCCGGY 1 cut(s) 1207
Bse1I ACTGG 4 cut(s) 119, 1314, 1509, 1879
Bse8I GATNNNNATC 1 cut(s) 1614
BseBI CCWGG 2 cut(s) 110, 1620
BseDI CCNNGG 6 cut(s) 201, 226, 232, 276, 1129, 1175
BseGI GGATG 4 cut(s) 442, 466, 649, 1711
BseJI GATNNNNATC 1 cut(s) 1614
BseLI CCNNNNNNNGG 1 cut(s) 61
BseMII CTCAG 7 cut(s) 384, 503, 1153, 1281, 1380, 1458, 1941
BseNI ACTGG 4 cut(s) 119, 1314, 1509, 1879
BseRI GAGGAG 6 cut(s) 32, 35, 128, 401, 767, 1840
BseSI GKGCMC 3 cut(s) 293, 1189, 1589
BseXI GCAGC 1 cut(s) 1451
BseYI CCCAGC 2 cut(s) 449, 553
BsgI GTGCAG 4 cut(s) 692, 1458, 1671, 1901
Bsh1236I CGCG 5 cut(s) 25, 51, 57, 74, 228
Bsh1285I CGRYCG 3 cut(s) 55, 150, 213
BshFI GGCC 2 cut(s) 231, 833
BshTI ACCGGT 1 cut(s) 1207
BsiEI CGRYCG 3 cut(s) 55, 150, 213
BsiHKAI GWGCWC 2 cut(s) 42, 293
BsiHKCI CYCGRG 3 cut(s) 35, 412, 1656
BsiSI CCGG 2 cut(s) 242, 1208
BslI CCNNNNNNNGG 1 cut(s) 61
BsmAI GTCTC 2 cut(s) 415, 1728
BsnI GGCC 2 cut(s) 231, 833
Bso31I GGTCTC 1 cut(s) 415
BsoBI CYCGRG 3 cut(s) 35, 412, 1656
Bsp119I TTCGAA 2 cut(s) 679, 1600
Bsp1286I GDGCHC 5 cut(s) 42, 293, 1051, 1189, 1589
Bsp143I GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
Bsp68I TCGCGA 1 cut(s) 74
BspANI GGCC 2 cut(s) 231, 833
BspCNI CTCAG 7 cut(s) 385, 504, 1152, 1280, 1381, 1459, 1942
BspFNI CGCG 5 cut(s) 25, 51, 57, 74, 228
BspLI GGNNCC 2 cut(s) 558, 742
BspMI ACCTGC 2 cut(s) 664, 1159
BspOI GCTAGC 1 cut(s) 485
BspPI GGATC 1 cut(s) 1419
BspT104I TTCGAA 2 cut(s) 679, 1600
BspTI CTTAAG 1 cut(s) 1307
BspTNI GGTCTC 1 cut(s) 415
BsrBI CCGCTC 3 cut(s) 100, 263, 330
BsrFI RCCGGY 1 cut(s) 1207
BsrI ACTGG 4 cut(s) 119, 1314, 1509, 1879
BssAI RCCGGY 1 cut(s) 1207
BssECI CCNNGG 6 cut(s) 201, 226, 232, 276, 1129, 1175
BssMI GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
BssNI GRCGYC 2 cut(s) 12, 1062
BssT1I CCWWGG 3 cut(s) 201, 232, 1175
Bst2UI CCWGG 2 cut(s) 110, 1620
Bst4CI ACNGT 5 cut(s) 133, 295, 856, 1130, 1408
Bst6I CTCTTC 1 cut(s) 1935
BstACI GRCGYC 2 cut(s) 12, 1062
BstAFI CTTAAG 1 cut(s) 1307
BstBI TTCGAA 2 cut(s) 679, 1600
BstC8I GCNNGC 5 cut(s) 404, 483, 487, 1255, 1663
BstDSI CCRYGG 3 cut(s) 226, 276, 1129
BstEII GGTNACC 1 cut(s) 178
BstF5I GGATG 4 cut(s) 442, 466, 649, 1711
BstFNI CGCG 5 cut(s) 25, 51, 57, 74, 228
BstHHI GCGC 4 cut(s) 275, 511, 796, 1081
BstKTI GATC 8 cut(s) 150, 213, 355, 1112, 1388, 1414, 1477, 1960
BstMAI GTCTC 2 cut(s) 415, 1728
BstMBI GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
BstMCI CGRYCG 3 cut(s) 55, 150, 213
BstMWI GCNNNNNNNGC 8 cut(s) 272, 692, 839, 887, 896, 1037, 1046, 1331
BstNI CCWGG 2 cut(s) 110, 1620
BstPI GGTNACC 1 cut(s) 178
BstSCI CCNGG 2 cut(s) 108, 1618
BstSFI CTRYAG 1 cut(s) 1335
BstSLI GKGCMC 3 cut(s) 293, 1189, 1589
BstUI CGCG 5 cut(s) 25, 51, 57, 74, 228
BstV1I GCAGC 1 cut(s) 1451
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 1 cut(s) 1385
BstXI CCANNNNNNTGG 2 cut(s) 1321, 1538
BstYI RGATCY 1 cut(s) 1385
BsuRI GGCC 2 cut(s) 231, 833
BtgI CCRYGG 3 cut(s) 226, 276, 1129
BtgZI GCGATG 1 cut(s) 563
BtsCI GGATG 4 cut(s) 442, 466, 649, 1711
BtsIMutI CAGTG 3 cut(s) 1275, 1321, 1790
BtuMI TCGCGA 1 cut(s) 74
BveI ACCTGC 2 cut(s) 664, 1159
Cac8I GCNNGC 5 cut(s) 404, 483, 487, 1255, 1663
CfoI GCGC 4 cut(s) 275, 511, 796, 1081
Cfr10I RCCGGY 1 cut(s) 1207
Cfr13I GGNCC 4 cut(s) 223, 557, 832, 1205
Cfr42I CCGCGG 1 cut(s) 229
CseI GACGC 2 cut(s) 58, 1070
Csp6I GTAC 4 cut(s) 268, 337, 1239, 1683
CspAI ACCGGT 1 cut(s) 1207
CviQI GTAC 4 cut(s) 268, 337, 1239, 1683
DpnI GATC 8 cut(s) 149, 212, 354, 1111, 1387, 1413, 1476, 1959
DpnII GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
DrdI GACNNNNNNGTC 1 cut(s) 11
DseDI GACNNNNNNGTC 1 cut(s) 11
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 1935
EarI CTCTTC 1 cut(s) 1935
Ecl136II GAGCTC 1 cut(s) 40
Eco130I CCWWGG 3 cut(s) 201, 232, 1175
Eco24I GRGCYC 2 cut(s) 42, 1051
Eco31I GGTCTC 1 cut(s) 415
Eco47I GGWCC 3 cut(s) 223, 557, 1205
Eco53kI GAGCTC 1 cut(s) 40
Eco57I CTGAAG 4 cut(s) 1248, 1302, 1814, 1982
Eco88I CYCGRG 3 cut(s) 35, 412, 1656
Eco91I GGTNACC 1 cut(s) 178
EcoICRI GAGCTC 1 cut(s) 40
EcoO109I RGGNCCY 1 cut(s) 557
EcoO65I GGTNACC 1 cut(s) 178
EcoRII CCWGG 2 cut(s) 108, 1618
EcoT14I CCWWGG 3 cut(s) 201, 232, 1175
EcoT38I GRGCYC 2 cut(s) 42, 1051
ErhI CCWWGG 3 cut(s) 201, 232, 1175
FalI AAGNNNNNCTT 4 cut(s) 1290, 1322, 1898, 1930
FauI CCCGC 1 cut(s) 323
FbaI TGATCA 1 cut(s) 1474
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1440
FokI GGATG 4 cut(s) 449, 473, 656, 1718
FriOI GRGCYC 2 cut(s) 42, 1051
Fsp4HI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1440
FspBI CTAG 5 cut(s) 194, 482, 1275, 1715, 1764
GlaI GCGC 4 cut(s) 274, 510, 795, 1080
GluI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1440
GsaI CCCAGC 2 cut(s) 453, 557
HaeIII GGCC 2 cut(s) 231, 833
HapII CCGG 2 cut(s) 242, 1208
HgaI GACGC 2 cut(s) 58, 1070
HhaI GCGC 4 cut(s) 275, 511, 796, 1081
Hin1I GRCGYC 2 cut(s) 12, 1062
Hin6I GCGC 4 cut(s) 273, 509, 794, 1079
HinP1I GCGC 4 cut(s) 273, 509, 794, 1079
HincII GTYRAC 2 cut(s) 16, 1573
HindII GTYRAC 2 cut(s) 16, 1573
HindIII AAGCTT 1 cut(s) 540
HinfI GANTC 9 cut(s) 81, 152, 197, 206, 238, 251, 389, 977, 1709
HpaII CCGG 2 cut(s) 242, 1208
HphI GGTGA 9 cut(s) 172, 307, 428, 632, 668, 746, 1000, 1619, 1748
Hpy166II GTNNAC 3 cut(s) 16, 291, 1573
Hpy188III TCNNGA 6 cut(s) 35, 73, 103, 1656, 1697, 1727
Hpy8I GTNNAC 3 cut(s) 16, 291, 1573
Hpy99I CGWCG 4 cut(s) 17, 20, 74, 286
HpyAV CCTTC 9 cut(s) 418, 426, 460, 529, 592, 611, 634, 705, 1957
HpyCH4III ACNGT 5 cut(s) 133, 295, 856, 1130, 1408
HpyCH4IV ACGT 6 cut(s) 12, 18, 1117, 1195, 1675, 1865
HpyF10VI GCNNNNNNNGC 8 cut(s) 272, 692, 839, 887, 896, 1037, 1046, 1331
HpySE526I ACGT 6 cut(s) 12, 18, 1117, 1195, 1675, 1865
Hsp92I GRCGYC 2 cut(s) 12, 1062
HspAI GCGC 4 cut(s) 273, 509, 794, 1079
Ksp22I TGATCA 1 cut(s) 1474
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
LmnI GCTCC 4 cut(s) 45, 746, 1179, 1845
Lsp1109I GCAGC 1 cut(s) 1451
LweI GCATC 5 cut(s) 496, 540, 1213, 1256, 1543
MaeI CTAG 5 cut(s) 194, 482, 1275, 1715, 1764
MaeII ACGT 6 cut(s) 12, 18, 1117, 1195, 1675, 1865
MaeIII GTNAC 5 cut(s) 178, 244, 850, 1058, 1339
MalI GATC 8 cut(s) 149, 212, 354, 1111, 1387, 1413, 1476, 1959
MbiI CCGCTC 3 cut(s) 100, 263, 330
MboI GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
MboII GAAGA 8 cut(s) 136, 139, 1241, 1313, 1807, 1868, 1871, 1952
MfeI CAATTG 1 cut(s) 1900
MflI RGATCY 1 cut(s) 1385
MhlI GDGCHC 5 cut(s) 42, 293, 1051, 1189, 1589
MluCI AATT 8 cut(s) 746, 785, 814, 859, 907, 920, 1377, 1900
MlyI GAGTC 8 cut(s) 90, 161, 206, 215, 245, 398, 986, 1703
MmeI TCCRAC 2 cut(s) 594, 1353
MseI TTAA 6 cut(s) 588, 858, 1212, 1308, 1836, 1868
MslI CAYNNNNRTG 4 cut(s) 1056, 1131, 1419, 1518
MspA1I CMGCKG 2 cut(s) 228, 1253
MspCI CTTAAG 1 cut(s) 1307
MspI CCGG 2 cut(s) 242, 1208
MspR9I CCNGG 2 cut(s) 110, 1620
MunI CAATTG 1 cut(s) 1900
MvaI CCWGG 2 cut(s) 110, 1620
MvnI CGCG 5 cut(s) 25, 51, 57, 74, 228
MwoI GCNNNNNNNGC 8 cut(s) 272, 692, 839, 887, 896, 1037, 1046, 1331
NdeII GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
NheI GCTAGC 1 cut(s) 481
NlaIV GGNNCC 2 cut(s) 558, 742
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 4 cut(s) 178, 244, 1058, 1339
NruI TCGCGA 1 cut(s) 74
NspV TTCGAA 2 cut(s) 679, 1600
OliI CACNNNNGTG 1 cut(s) 1131
PaeR7I CTCGAG 1 cut(s) 35
PfeI GAWTC 1 cut(s) 238
PinAI ACCGGT 1 cut(s) 1207
PkrI GCNGC 6 cut(s) 91, 99, 230, 265, 526, 1441
Ple19I CGATCG 2 cut(s) 150, 213
PleI GAGTC 8 cut(s) 89, 160, 205, 214, 245, 397, 985, 1703
PpsI GAGTC 8 cut(s) 89, 160, 205, 214, 245, 397, 985, 1703
PpuMI RGGWCCY 1 cut(s) 557
Psp124BI GAGCTC 1 cut(s) 42
Psp5II RGGWCCY 1 cut(s) 557
Psp6I CCWGG 2 cut(s) 108, 1618
PspEI GGTNACC 1 cut(s) 178
PspFI CCCAGC 2 cut(s) 449, 553
PspGI CCWGG 2 cut(s) 108, 1618
PspN4I GGNNCC 2 cut(s) 558, 742
PspPI GGNCC 4 cut(s) 223, 557, 832, 1205
PspPPI RGGWCCY 1 cut(s) 557
PsuI RGATCY 1 cut(s) 1385
PvuI CGATCG 2 cut(s) 150, 213
PvuII CAGCTG 1 cut(s) 1253
RruI TCGCGA 1 cut(s) 74
RsaI GTAC 4 cut(s) 269, 338, 1240, 1684
RsaNI GTAC 4 cut(s) 268, 337, 1239, 1683
RseI CAYNNNNRTG 4 cut(s) 1056, 1131, 1419, 1518
SacI GAGCTC 1 cut(s) 42
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 6 cut(s) 588, 858, 1212, 1308, 1836, 1868
SatI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1440
Sau3AI GATC 8 cut(s) 147, 210, 352, 1109, 1385, 1411, 1474, 1957
Sau96I GGNCC 4 cut(s) 223, 557, 832, 1205
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 8 cut(s) 90, 161, 206, 215, 245, 398, 986, 1703
ScrFI CCNGG 2 cut(s) 110, 1620
SduI GDGCHC 5 cut(s) 42, 293, 1051, 1189, 1589
SfaNI GCATC 5 cut(s) 496, 540, 1213, 1256, 1543
SfcI CTRYAG 1 cut(s) 1335
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 229
SfuI TTCGAA 2 cut(s) 679, 1600
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 3 cut(s) 223, 557, 1205
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 4 cut(s) 1056, 1131, 1419, 1518
SmlI CTYRAG 3 cut(s) 35, 1307, 1697
SmoI CTYRAG 3 cut(s) 35, 1307, 1697
Sse9I AATT 8 cut(s) 746, 785, 814, 859, 907, 920, 1377, 1900
SspMI CTAG 5 cut(s) 194, 482, 1275, 1715, 1764
SstI GAGCTC 1 cut(s) 42
StyD4I CCNGG 2 cut(s) 108, 1618
StyI CCWWGG 3 cut(s) 201, 232, 1175
TaaI ACNGT 5 cut(s) 133, 295, 856, 1130, 1408
TaiI ACGT 6 cut(s) 15, 21, 1120, 1198, 1678, 1868
TaqII GACCGA 1 cut(s) 166
TasI AATT 8 cut(s) 746, 785, 814, 859, 907, 920, 1377, 1900
TatI WGTACW 2 cut(s) 336, 1682
TauI GCSGC 5 cut(s) 92, 100, 231, 266, 527
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 6 cut(s) 588, 858, 1212, 1308, 1836, 1868
Tru9I TTAA 6 cut(s) 588, 858, 1212, 1308, 1836, 1868
TscAI CASTG 3 cut(s) 1275, 1321, 1797
TseFI GTSAC 4 cut(s) 178, 244, 1058, 1339
TseI GCWGC 1 cut(s) 1439
Tsp45I GTSAC 4 cut(s) 178, 244, 1058, 1339
TspDTI ATGAA 2 cut(s) 506, 1869
TspGWI ACGGA 5 cut(s) 263, 299, 552, 1256, 1617
TspRI CASTG 3 cut(s) 1275, 1321, 1797
Vha464I CTTAAG 1 cut(s) 1307
VneI GTGCAC 1 cut(s) 289
VpaK11BI GGWCC 3 cut(s) 223, 557, 1205
XhoI CTCGAG 1 cut(s) 35
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 5 cut(s) 194, 482, 1275, 1715, 1764
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 1684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.