Rroxscaffold_3G00240990
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000851
Physical Location & Seq
Reverse (-)
32958041 .. 32961264
3224 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00240990.1

Sequence Viewer

Length: 1983 bp
ATGGACTTAGACGTCGACATTTCGCGGTGGGTCCTGGAGTTTCTCCTCCGTGACCGCCACAACGAGACAATCGCCAAGCGACTCCTTGCCGTCGCGCCGCTCCCGAACCGCCACGACTGGCGGTTGAAGAAGACCGTCCTCCTCCGAACAATCGAGTCCCCAATCTACGACGACGCTTCAGTCACCGAAGCGATCCTCGAAGCCCTGGAGTCCATCGAGGCTTTGGACCGCGGCCAAGGGTTTCAGACCACGGAGGCCATGAGGGCGGCGTACTGCGCCGTCGCAACGGAGTGCACGGTTAAGTTCTTGGTTTGCTTCGGACGGAAGTACATTGAGGCTGTGGATCGGATTTGGAGAGGCAGGGTTAGGGTTTTGGAGGAGAGTGAGGGGAGCGAACTGGTTTCGGCGGAGTTGAAAGAGAGAAGATATGAGGTGGAGGCTGCGATTTGGGATAGGAATGTGTCGAAAAAGCTAGCGAGGATGAATACTAGAAATGATGCGCTGAGATTGGTTGGGGAGTATGTGGAGGAAGCTTGGGCTGTGATTGGTCCTCCTTTTCTTAATTGGGCCGTTAGATTTCATATGGTTAAGGAAAGTTTAGGTAAGGGTGATGGTAATGTAGGTGATGGGTGTGGAAAGGAGGTTGGAATGGTGAATGGGAATGAACTGGAGGTGCAGGTAGCAAATGGGGCTGATTTGGGTGATGGTTCCAAATTGGAGGTCAATGGGGCTAATGAGGGTGATGGGTCTAAACCGGAGGTGCAAATAGAGAGTGATACTAAGGTTGGTCATGGGTCTGAATTGGTAATTTGGACTGGGGTGGAAGTGCCATTGACAAATGGGGCTGATTTGGGTGTTGGGAAAGAGTTGAATGGGCAAAGGGAAAATGGGGCTAATGTTAGTGATGGGTCTGGAGTAAAGGCGCGAAGGGTGAATGGAGCCAATGTTGGTGGTGATAGGTCTAAATGGGAGGTGCAGCGAGTGGAAAATGCTACTAATGTGGGTGATGTGACTGTGGCTTTTTCCAAGTTTGGGTCTCTGTTGGGTTACCATTCTATGGACGGTGTTTTGCGGGTAGTGGGGGAAGGGAGGTCACCGCTTAATGTGAACTGTGGTGTCCTCAGTTTTGCACCTGCAACAAAAGAGAAAGAAATTCCGAGGAACAGGGCACTTAGGCACAAGCATGGACCACTTAAGATTAGAGATGCTGAATATGTCGGCACGGATGCATCAGATGGCATACATAATTACGTATCCAGCACTGAAGTTAGAAAAGTGCAAGAACAACTTAAGTCCGGTGTTATGGCTGTACAATCTGTATTGACAGACCCACTACCTTATAATTTGCGCGTGCCGGAAATTGTAAGATCTGAGGTGGAAGTCAATCATGTAAATAGAGAAGATGGTACAGAAAATCCATCTGTTGAAAAGACCACTGGGCCTGATCATTCTAATAGTGATACTAATGGAAATCTGACCTCCAGTGATCAGAACGATGTGCCCCAAGGTCCTGGAAAAGAAAATGATGCATCCAACCTGTCCGTTGAGAAGGGAAAGGGCACACAGTATGTTCGAAGTGGTGATCCCAACCATGCAGATCTGTGTTGCAGTAATCAGAATAGTGGTCCTCGACCTGGGTTGATGGAACGTAATAGTACTGCCCATACTTACAAGTGGGATGACTCGCTGGGTATGTCACCTGAGGGAACAAGTAATGCTAAGGGCACGCTTCATTTACCTACATTAAAACGGAATGCTATTTCTCCACTGAAAAAGTATGAGGATAAAAGATTTGCTAAGAGGAGAAAAGTAAAGAGATGGAGTGTACATGAAGAAGACACGTTAAGGGCTGGTGTGCAAGAGTATGGTAAAGGAAAATGGAAGCTTATCTTAGATGCATACCGAGATGTATTTGAAGAAAGAACTGAGGTCGATTTAAAGGACAAGTGGAGAAACATGTCGAAGTGGAGGCACTGTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

660

Amino Acids

73.09

Weight (kDa)

6.02

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 605 - 653 2.4e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1341
AarI CACCTGC 1 cut(s) 1141
AasI GACNNNNNNGTC 2 cut(s) 11, 179
AatII GACGTC 1 cut(s) 15
Acc36I ACCTGC 2 cut(s) 667, 1141
AccB7I CCANNNNNTGG 1 cut(s) 1057
AccBSI CCGCTC 1 cut(s) 100
AccI GTMKAC 1 cut(s) 15
AccII CGCG 5 cut(s) 25, 95, 231, 925, 1350
AclWI GGATC 3 cut(s) 187, 351, 1577
AcoI YGGCCR 1 cut(s) 232
AcsI RAATTY 1 cut(s) 1152
AcuI CTGAAG 2 cut(s) 162, 1284
AcyI GRCGYC 1 cut(s) 12
AfaI GTAC 6 cut(s) 272, 329, 1311, 1408, 1657, 1827
AfiI CCNNNNNNNGG 3 cut(s) 1032, 1057, 1634
AflII CTTAAG 2 cut(s) 1193, 1289
AflIII ACRYGT 2 cut(s) 1839, 1956
AgsI TTSAA 5 cut(s) 127, 415, 871, 1427, 1916
AjnI CCWGG 4 cut(s) 33, 204, 1510, 1633
AluBI AGCT 3 cut(s) 472, 533, 1885
AluI AGCT 3 cut(s) 472, 533, 1885
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 2 cut(s) 59, 1041
Alw44I GTGCAC 1 cut(s) 292
AlwI GGATC 3 cut(s) 187, 351, 1577
AoxI GGCC 4 cut(s) 232, 255, 567, 1439
ApaLI GTGCAC 1 cut(s) 292
ApeKI GCWGC 2 cut(s) 440, 976
ApoI RAATTY 1 cut(s) 1152
ArsI GACNNNNNNTTYG 2 cut(s) 705, 737
AspLEI GCGC 5 cut(s) 97, 278, 502, 925, 1350
AspS9I GGNCC 8 cut(s) 31, 226, 548, 567, 1187, 1439, 1508, 1625
AsuII TTCGAA 1 cut(s) 1573
AsuNHI GCTAGC 1 cut(s) 472
AvaII GGWCC 6 cut(s) 31, 226, 548, 1187, 1508, 1625
AxyI CCTNAGG 1 cut(s) 1701
BaeGI GKGCMC 5 cut(s) 296, 1171, 1503, 1562, 1727
BaeI ACNNNNGTAYC 2 cut(s) 768, 801
BbsI GAAGAC 2 cut(s) 137, 1842
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 2 cut(s) 427, 988
BceAI ACGGC 3 cut(s) 74, 263, 554
BciT130I CCWGG 4 cut(s) 35, 206, 1512, 1635
BciVI GTATCC 1 cut(s) 1264
BclI TGATCA 2 cut(s) 1444, 1486
BcoDI GTCTC 2 cut(s) 59, 1041
BfaI CTAG 3 cut(s) 473, 489, 1981
BfrI CTTAAG 2 cut(s) 1193, 1289
BfuAI ACCTGC 2 cut(s) 667, 1141
BfuI GTATCC 1 cut(s) 1264
BglI GCCNNNNNGGC 1 cut(s) 263
BglII AGATCT 2 cut(s) 1367, 1597
BisI GCNGC 5 cut(s) 98, 232, 267, 441, 977
BlsI GCNGC 5 cut(s) 99, 233, 268, 442, 978
BmcAI AGTACT 1 cut(s) 1657
Bme1390I CCNGG 4 cut(s) 35, 206, 1512, 1635
Bme18I GGWCC 6 cut(s) 31, 226, 548, 1187, 1508, 1625
BmgT120I GGNCC 8 cut(s) 31, 226, 548, 567, 1187, 1439, 1508, 1625
BmiI GGNNCC 3 cut(s) 32, 709, 940
BmrFI CCNGG 4 cut(s) 35, 206, 1512, 1635
BmrI ACTGGG 2 cut(s) 825, 1446
BmsI GCATC 7 cut(s) 487, 1195, 1216, 1238, 1516, 1538, 1885
BmtI GCTAGC 1 cut(s) 476
BmuI ACTGGG 2 cut(s) 825, 1446
BpiI GAAGAC 2 cut(s) 137, 1842
BpmI CTGGAG 5 cut(s) 56, 227, 689, 933, 1465
Bpu10I CCTNAGC 1 cut(s) 1719
Bpu14I TTCGAA 1 cut(s) 1573
BsaAI YACGTR 1 cut(s) 1252
BsaHI GRCGYC 1 cut(s) 12
BsaI GGTCTC 1 cut(s) 1041
BsaJI CCNNGG 7 cut(s) 204, 229, 235, 249, 1157, 1504, 1634
BsaWI WCCGGW 2 cut(s) 754, 1295
BsaXI ACNNNNNCTCC 3 cut(s) 930, 960, 1960
Bsc4I CCNNNNNNNGG 3 cut(s) 1032, 1057, 1634
Bse1I ACTGG 6 cut(s) 122, 402, 672, 820, 1441, 1482
Bse21I CCTNAGG 1 cut(s) 1701
BseBI CCWGG 4 cut(s) 35, 206, 1512, 1635
BseDI CCNNGG 7 cut(s) 204, 229, 235, 249, 1157, 1504, 1634
BseGI GGATG 4 cut(s) 486, 1231, 1529, 1684
BseLI CCNNNNNNNGG 3 cut(s) 1032, 1057, 1634
BseMII CTCAG 5 cut(s) 494, 1135, 1362, 1692, 1917
BseNI ACTGG 6 cut(s) 122, 402, 672, 820, 1441, 1482
BseRI GAGGAG 4 cut(s) 35, 131, 392, 1816
BseSI GKGCMC 5 cut(s) 296, 1171, 1503, 1562, 1727
BseXI GCAGC 2 cut(s) 427, 988
BseYI CCCAGC 1 cut(s) 1687
BsgI GTGCAG 2 cut(s) 695, 995
Bsh1236I CGCG 5 cut(s) 25, 95, 231, 925, 1350
BshFI GGCC 4 cut(s) 234, 257, 569, 1441
BsiHKAI GWGCWC 1 cut(s) 296
BsiSI CCGG 3 cut(s) 755, 1296, 1355
BslFI GGGAC 1 cut(s) 142
BslI CCNNNNNNNGG 3 cut(s) 1032, 1057, 1634
BsmAI GTCTC 2 cut(s) 59, 1041
BsmFI GGGAC 1 cut(s) 142
BsmI GAATGC 1 cut(s) 1759
BsnI GGCC 4 cut(s) 234, 257, 569, 1441
Bso31I GGTCTC 1 cut(s) 1041
Bsp119I TTCGAA 1 cut(s) 1573
Bsp1286I GDGCHC 5 cut(s) 296, 1171, 1503, 1562, 1727
Bsp1407I TGTACA 2 cut(s) 1309, 1825
Bsp143I GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
BspANI GGCC 4 cut(s) 234, 257, 569, 1441
BspCNI CTCAG 5 cut(s) 495, 1134, 1363, 1693, 1918
BspFNI CGCG 5 cut(s) 25, 95, 231, 925, 1350
BspLI GGNNCC 3 cut(s) 32, 709, 940
BspMI ACCTGC 2 cut(s) 667, 1141
BspOI GCTAGC 1 cut(s) 476
BspPI GGATC 3 cut(s) 187, 351, 1577
BspT104I TTCGAA 1 cut(s) 1573
BspTI CTTAAG 2 cut(s) 1193, 1289
BspTNI GGTCTC 1 cut(s) 1041
BsrBI CCGCTC 1 cut(s) 100
BsrGI TGTACA 2 cut(s) 1309, 1825
BsrI ACTGG 6 cut(s) 122, 402, 672, 820, 1441, 1482
BssECI CCNNGG 7 cut(s) 204, 229, 235, 249, 1157, 1504, 1634
BssMI GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
BssNI GRCGYC 1 cut(s) 12
BssT1I CCWWGG 2 cut(s) 235, 1504
Bst2UI CCWGG 4 cut(s) 35, 206, 1512, 1635
Bst4CI ACNGT 7 cut(s) 136, 298, 1015, 1064, 1112, 1566, 1976
BstACI GRCGYC 1 cut(s) 12
BstAFI CTTAAG 2 cut(s) 1193, 1289
BstAUI TGTACA 2 cut(s) 1309, 1825
BstBAI YACGTR 1 cut(s) 1252
BstBI TTCGAA 1 cut(s) 1573
BstC8I GCNNGC 3 cut(s) 474, 1352, 1727
BstDSI CCRYGG 2 cut(s) 229, 249
BstEII GGTNACC 2 cut(s) 1046, 1092
BstF5I GGATG 4 cut(s) 486, 1231, 1529, 1684
BstFNI CGCG 5 cut(s) 25, 95, 231, 925, 1350
BstHHI GCGC 5 cut(s) 97, 278, 502, 925, 1350
BstKTI GATC 7 cut(s) 195, 346, 1370, 1447, 1489, 1585, 1600
BstMAI GTCTC 2 cut(s) 59, 1041
BstMBI GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
BstMWI GCNNNNNNNGC 3 cut(s) 263, 275, 689
BstNI CCWGG 4 cut(s) 35, 206, 1512, 1635
BstNSI RCATGY 1 cut(s) 1960
BstPI GGTNACC 2 cut(s) 1046, 1092
BstSCI CCNGG 4 cut(s) 33, 204, 1510, 1633
BstSLI GKGCMC 5 cut(s) 296, 1171, 1503, 1562, 1727
BstSNI TACGTA 1 cut(s) 1252
BstUI CGCG 5 cut(s) 25, 95, 231, 925, 1350
BstV1I GCAGC 2 cut(s) 427, 988
BstV2I GAAGAC 2 cut(s) 137, 1842
BstX2I RGATCY 2 cut(s) 1367, 1597
BstXI CCANNNNNNTGG 1 cut(s) 1511
BstYI RGATCY 2 cut(s) 1367, 1597
Bsu36I CCTNAGG 1 cut(s) 1701
BsuI GTATCC 1 cut(s) 1264
BsuRI GGCC 4 cut(s) 234, 257, 569, 1441
BtgI CCRYGG 2 cut(s) 229, 249
BtsCI GGATG 4 cut(s) 486, 1231, 1529, 1684
BtsIMutI CAGTG 5 cut(s) 1260, 1434, 1489, 1766, 1972
BveI ACCTGC 2 cut(s) 667, 1141
Cac8I GCNNGC 3 cut(s) 474, 1352, 1727
CfoI GCGC 5 cut(s) 97, 278, 502, 925, 1350
Cfr13I GGNCC 8 cut(s) 31, 226, 548, 567, 1187, 1439, 1508, 1625
Cfr42I CCGCGG 1 cut(s) 232
CseI GACGC 1 cut(s) 182
Csp6I GTAC 6 cut(s) 271, 328, 1310, 1407, 1656, 1826
CspCI CAANNNNNGTGG 2 cut(s) 931, 966
CviAII CATG 7 cut(s) 259, 791, 1184, 1388, 1592, 1829, 1957
CviQI GTAC 6 cut(s) 271, 328, 1310, 1407, 1656, 1826
DpnI GATC 7 cut(s) 194, 345, 1369, 1446, 1488, 1584, 1599
DpnII GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
DraI TTTAAA 1 cut(s) 1938
DrdI GACNNNNNNGTC 2 cut(s) 11, 179
DseDI GACNNNNNNGTC 2 cut(s) 11, 179
EaeI YGGCCR 1 cut(s) 232
EciI GGCGGA 1 cut(s) 422
Eco105I TACGTA 1 cut(s) 1252
Eco130I CCWWGG 2 cut(s) 235, 1504
Eco31I GGTCTC 1 cut(s) 1041
Eco47I GGWCC 6 cut(s) 31, 226, 548, 1187, 1508, 1625
Eco57I CTGAAG 2 cut(s) 162, 1284
Eco81I CCTNAGG 1 cut(s) 1701
Eco91I GGTNACC 2 cut(s) 1046, 1092
EcoO109I RGGNCCY 2 cut(s) 31, 1508
EcoO65I GGTNACC 2 cut(s) 1046, 1092
EcoRII CCWGG 4 cut(s) 33, 204, 1510, 1633
EcoT14I CCWWGG 2 cut(s) 235, 1504
EcoT22I ATGCAT 3 cut(s) 1231, 1531, 1900
ErhI CCWWGG 2 cut(s) 235, 1504
FaeI CATG 7 cut(s) 262, 794, 1187, 1391, 1595, 1832, 1960
FalI AAGNNNNNCTT 4 cut(s) 1272, 1304, 1874, 1906
FaqI GGGAC 1 cut(s) 142
FatI CATG 7 cut(s) 258, 790, 1183, 1387, 1591, 1828, 1956
FauI CCCGC 1 cut(s) 1065
FauNDI CATATG 1 cut(s) 582
FbaI TGATCA 2 cut(s) 1444, 1486
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 5 cut(s) 98, 232, 267, 441, 977
FokI GGATG 4 cut(s) 493, 1238, 1516, 1691
Fsp4HI GCNGC 5 cut(s) 98, 232, 267, 441, 977
FspBI CTAG 3 cut(s) 473, 489, 1981
GlaI GCGC 5 cut(s) 96, 277, 501, 924, 1349
GluI GCNGC 5 cut(s) 98, 232, 267, 441, 977
GsaI CCCAGC 1 cut(s) 1691
GsuI CTGGAG 5 cut(s) 56, 227, 689, 933, 1465
HaeIII GGCC 4 cut(s) 234, 257, 569, 1441
HapII CCGG 3 cut(s) 755, 1296, 1355
HgaI GACGC 1 cut(s) 182
HhaI GCGC 5 cut(s) 97, 278, 502, 925, 1350
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 7 cut(s) 262, 794, 1187, 1391, 1595, 1832, 1960
Hin6I GCGC 5 cut(s) 95, 276, 500, 923, 1348
HinP1I GCGC 5 cut(s) 95, 276, 500, 923, 1348
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HindIII AAGCTT 2 cut(s) 531, 1883
HinfI GANTC 4 cut(s) 81, 155, 209, 1682
HpaII CCGG 3 cut(s) 755, 1296, 1355
Hpy166II GTNNAC 4 cut(s) 16, 294, 1108, 1826
Hpy188III TCNNGA 2 cut(s) 103, 912
Hpy8I GTNNAC 4 cut(s) 16, 294, 1108, 1826
Hpy99I CGWCG 5 cut(s) 17, 95, 173, 176, 284
HpyAV CCTTC 3 cut(s) 921, 1079, 1543
HpyCH4III ACNGT 7 cut(s) 136, 298, 1015, 1064, 1112, 1566, 1976
HpyCH4IV ACGT 4 cut(s) 12, 1251, 1648, 1841
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 275, 689
HpySE526I ACGT 4 cut(s) 12, 1251, 1648, 1841
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 7 cut(s) 262, 794, 1187, 1391, 1595, 1832, 1960
HspAI GCGC 5 cut(s) 95, 276, 500, 923, 1348
Ksp22I TGATCA 2 cut(s) 1444, 1486
KspI CCGCGG 1 cut(s) 232
Kzo9I GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
LmnI GCTCC 3 cut(s) 105, 390, 938
Lsp1109I GCAGC 2 cut(s) 427, 988
LweI GCATC 7 cut(s) 487, 1195, 1216, 1238, 1516, 1538, 1885
MaeI CTAG 3 cut(s) 473, 489, 1981
MaeII ACGT 4 cut(s) 12, 1251, 1648, 1841
MaeIII GTNAC 7 cut(s) 50, 181, 1009, 1046, 1092, 1695, 1976
MalI GATC 7 cut(s) 194, 345, 1369, 1446, 1488, 1584, 1599
MbiI CCGCTC 1 cut(s) 100
MboI GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
MboII GAAGA 7 cut(s) 139, 142, 435, 1412, 1844, 1847, 1928
MflI RGATCY 2 cut(s) 1367, 1597
MhlI GDGCHC 5 cut(s) 296, 1171, 1503, 1562, 1727
MluCI AATT 8 cut(s) 562, 713, 800, 807, 1152, 1246, 1342, 1359
MlyI GAGTC 4 cut(s) 75, 164, 218, 1676
MmeI TCCRAC 2 cut(s) 625, 1557
Mph1103I ATGCAT 3 cut(s) 1231, 1531, 1900
MseI TTAA 9 cut(s) 300, 561, 588, 1101, 1194, 1290, 1745, 1844, 1937
MslI CAYNNNNRTG 1 cut(s) 1182
MspA1I CMGCKG 1 cut(s) 231
MspCI CTTAAG 2 cut(s) 1193, 1289
MspI CCGG 3 cut(s) 755, 1296, 1355
MspR9I CCNGG 4 cut(s) 35, 206, 1512, 1635
Mva1269I GAATGC 1 cut(s) 1759
MvaI CCWGG 4 cut(s) 35, 206, 1512, 1635
MvnI CGCG 5 cut(s) 25, 95, 231, 925, 1350
MwoI GCNNNNNNNGC 3 cut(s) 263, 275, 689
NdeI CATATG 1 cut(s) 582
NdeII GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
NheI GCTAGC 1 cut(s) 472
NlaIII CATG 7 cut(s) 262, 794, 1187, 1391, 1595, 1832, 1960
NlaIV GGNNCC 3 cut(s) 32, 709, 940
NmuCI GTSAC 6 cut(s) 50, 181, 1009, 1092, 1695, 1976
NsiI ATGCAT 3 cut(s) 1231, 1531, 1900
NspI RCATGY 1 cut(s) 1960
NspV TTCGAA 1 cut(s) 1573
PaqCI CACCTGC 1 cut(s) 1141
PciI ACATGT 1 cut(s) 1956
PctI GAATGC 1 cut(s) 1759
PflMI CCANNNNNTGG 1 cut(s) 1057
PfoI TCCNGGA 2 cut(s) 33, 1510
PkrI GCNGC 5 cut(s) 99, 233, 268, 442, 978
PleI GAGTC 4 cut(s) 75, 163, 217, 1676
PpsI GAGTC 4 cut(s) 75, 163, 217, 1676
Ppu21I YACGTR 1 cut(s) 1252
PpuMI RGGWCCY 2 cut(s) 31, 1508
PscI ACATGT 1 cut(s) 1956
PsiI TTATAA 1 cut(s) 1341
Psp5II RGGWCCY 2 cut(s) 31, 1508
Psp6I CCWGG 4 cut(s) 33, 204, 1510, 1633
PspEI GGTNACC 2 cut(s) 1046, 1092
PspFI CCCAGC 1 cut(s) 1687
PspGI CCWGG 4 cut(s) 33, 204, 1510, 1633
PspN4I GGNNCC 3 cut(s) 32, 709, 940
PspPI GGNCC 8 cut(s) 31, 226, 548, 567, 1187, 1439, 1508, 1625
PspPPI RGGWCCY 2 cut(s) 31, 1508
PsuI RGATCY 2 cut(s) 1367, 1597
RsaI GTAC 6 cut(s) 272, 329, 1311, 1408, 1657, 1827
RsaNI GTAC 6 cut(s) 271, 328, 1310, 1407, 1656, 1826
RseI CAYNNNNRTG 1 cut(s) 1182
SacII CCGCGG 1 cut(s) 232
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 9 cut(s) 300, 561, 588, 1101, 1194, 1290, 1745, 1844, 1937
SatI GCNGC 5 cut(s) 98, 232, 267, 441, 977
Sau3AI GATC 7 cut(s) 192, 343, 1367, 1444, 1486, 1582, 1597
Sau96I GGNCC 8 cut(s) 31, 226, 548, 567, 1187, 1439, 1508, 1625
ScaI AGTACT 1 cut(s) 1657
SchI GAGTC 4 cut(s) 75, 164, 218, 1676
ScrFI CCNGG 4 cut(s) 35, 206, 1512, 1635
SduI GDGCHC 5 cut(s) 296, 1171, 1503, 1562, 1727
SfaNI GCATC 7 cut(s) 487, 1195, 1216, 1238, 1516, 1538, 1885
Sfr303I CCGCGG 1 cut(s) 232
SfuI TTCGAA 1 cut(s) 1573
SgrBI CCGCGG 1 cut(s) 232
SinI GGWCC 6 cut(s) 31, 226, 548, 1187, 1508, 1625
SmiMI CAYNNNNRTG 1 cut(s) 1182
SmlI CTYRAG 2 cut(s) 1193, 1289
SmoI CTYRAG 2 cut(s) 1193, 1289
SnaBI TACGTA 1 cut(s) 1252
Sse9I AATT 8 cut(s) 562, 713, 800, 807, 1152, 1246, 1342, 1359
SspMI CTAG 3 cut(s) 473, 489, 1981
StyD4I CCNGG 4 cut(s) 33, 204, 1510, 1633
StyI CCWWGG 2 cut(s) 235, 1504
TaaI ACNGT 7 cut(s) 136, 298, 1015, 1064, 1112, 1566, 1976
TaiI ACGT 4 cut(s) 15, 1254, 1651, 1844
TaqI TCGA 9 cut(s) 15, 153, 198, 216, 464, 1573, 1630, 1932, 1961
TasI AATT 8 cut(s) 562, 713, 800, 807, 1152, 1246, 1342, 1359
TatI WGTACW 4 cut(s) 327, 1309, 1655, 1825
TauI GCSGC 3 cut(s) 100, 234, 269
Tru1I TTAA 9 cut(s) 300, 561, 588, 1101, 1194, 1290, 1745, 1844, 1937
Tru9I TTAA 9 cut(s) 300, 561, 588, 1101, 1194, 1290, 1745, 1844, 1937
TscAI CASTG 5 cut(s) 1267, 1441, 1489, 1773, 1979
TseFI GTSAC 6 cut(s) 50, 181, 1009, 1092, 1695, 1976
TseI GCWGC 2 cut(s) 440, 976
Tsp45I GTSAC 6 cut(s) 50, 181, 1009, 1092, 1695, 1976
TspDTI ATGAA 5 cut(s) 497, 569, 678, 1721, 1845
TspGWI ACGGA 7 cut(s) 38, 266, 302, 337, 1238, 1531, 1765
TspRI CASTG 5 cut(s) 1267, 1441, 1489, 1773, 1979
Van91I CCANNNNNTGG 1 cut(s) 1057
Vha464I CTTAAG 2 cut(s) 1193, 1289
VneI GTGCAC 1 cut(s) 292
VpaK11BI GGWCC 6 cut(s) 31, 226, 548, 1187, 1508, 1625
XapI RAATTY 1 cut(s) 1152
XceI RCATGY 1 cut(s) 1960
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 3 cut(s) 473, 489, 1981
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 1657
Zsp2I ATGCAT 3 cut(s) 1231, 1531, 1900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.