Rh5DG003700
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000851
Physical Location & Seq
Forward (+)
273192 .. 276181
2990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG003700.1

Sequence Viewer

Length: 2013 bp
ATGGACTTAGACGTCGACGTTTCGCGGTGGGTCCTCGAGTTCCTCTTCCGTGACCCCGAGAAGGAGAGCGTCGCTAAGCGAGTCCTCGGCGTCTTGCCGCTCTCGAACCACGACTGGCGGTTGAAGAAGACCCTCCTCCTCCGAACAATCGAGTCCCAAATCTTGGACGAGGCTTCTGTCACCGAAACCCTCCTCGAATCCTTGGAGTCCATCGAGGTTCTGGACCGCGGCCTAGGGCTCCCGATCACGGACTCAATGAGAGCGGCCTACTGCGCCGTGGCGACGGATTGCACGGTCAAGTTTTTGGCTGGCTTCAGAGGGAAGCCGAATGGAAAGTACATGGAGGCAGTCGATCGGATTTGGAGAGGTAGGGTTAGGATTTTGGAGGAGTCTGAGGGTTGCGAGCTGGTATCGGCTGAGTTGAAGGAGACAAGGGATGAGGTGGAGGCTGCGATTTGGGATATCAAGGTTTCTAAGAAGCTAGCGAGCCTGAACACTAGAAATGATGCGCTGGCATTGGTTGCGGCGTATGTGGAGGAAGCTTTGGGGATGCTGGGTCCTCCGTTTATTGCTTGGGCTGTTAGATTTAATAAGCACAAGGGTAGTTTAAGCTCGGAAGCTGATCAGGTTGCAGTGGAGAGTGATGGTAATGCGGGTGATGGGTGTCAAGTGCAGGTTCCAACGGCGAATGGGGCTGAATTGGAGGTGCAAATGGCAAATGGGGCTGATTTGGACGTGCAAATGGGGAATGGGGTTGATTTGGGTGATGGCTCCAAATTGGAGGTGAATGGGGCTAATGTGCGTGAATTGGAAGCGCAGAGAGGAGCTAATGTCAATTCTGGGTCTGAACAGGAGGCACAAAGGGCGAATGGGCCTAATGTCAATTCGGAGTCTGAATTAGAGGCACAAAGGGTGAATGGGGCAAATGATGTTAGTGCTAGGTCTGAACAGGAGCCGCAAAGGGCTAAGGGGGCTAATGTTAGTGATGCCTGTGAACGGGAGGCGCATGATACTAATGTGGGTGATGAGTCTGAATCACAAATTGTGACTGTAGCTTATTTCAATTCTAGGTCTGAAATGGATCACCATACTATGAATGGTGTTCAATTGCAGATAGTGGGGGCAGAAAGGTCGCCACCTAATGGAAACCATTGTGTCCTCAGCTCTGAACCTGCAACTAAAGAGAAAGAAACTCCAAGGAGCACGGCACTTAGACGCAGGCATGGACCAGTTAAGATTAGAGATGCTGAAGATGTGGGTATGGAAGCATCAGCTGGCATATATAACTCAGTGTCTAGTGCTGAAGTTAGAAAAGTGCAAGAAGAACTCAAGTCCAGTGTTTTGGCTCTACAAGCTGTAGTGACAGACCCACTTCCTTCTGCTTTGCGCAAGTCGGAAATTGTAAGATCTGAGTTGGGAATGAGACCTGTGGATCATGTAAGTGGAGAAAATGGAGGTGCAGCAAATCCATCTGTTGCAAAGTGCACTGAGCCTGATCAGTTTAATAATGATAATCATGGAAACCACACCAGTCATCAGAATGATGTTCCCCAACCTAGTGGAAAAGAAAATGATGCACCAAATCTGTCTGTTGACAAGGGAAAGGGCACGGATTATGTTCAGACGGGTGATGTCAATCCTGGAAATCCATCTTGCAGTTTTCAGAATAATGTTTCCCGAGCTGGCTTGATGGAACGTAATAGTACTGCCCATACTTATGAGTGGGATGACTCGCTAGGTATGTCACCTGAACAAACGAATAGTAAGGGGAGGCTTCACCTACCTAGTCCAAAAAGGAATGCTGTTTCTCCGCTGAAGAAGTACGAGGATAAAAGATCTTTTAAGAGGAGAAAAGTTAAGAGATGGAGCTTACATGAAGAAGATACGTTAAGGACTGGTGTGCAGAAGTATGGCAGAGGCAATTGGAAGTTTATCTTAGATACATACCGAGATGTATTTGAAGAGAGAACTAAGGTTGATCTAAAGGACAAGTGGAGAAATATGACGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

670

Amino Acids

73.68

Weight (kDa)

5.36

Isoelectric Point (pI)

38.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 620 - 668 5.2e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 11
AatII GACGTC 1 cut(s) 15
Acc16I TGCGCA 1 cut(s) 1388
Acc36I ACCTGC 2 cut(s) 664, 1180
AccB7I CCANNNNNTGG 2 cut(s) 163, 1142
AccBSI CCGCTC 2 cut(s) 100, 263
AccI GTMKAC 1 cut(s) 15
AccII CGCG 2 cut(s) 25, 228
AclWI GGATC 2 cut(s) 1089, 1440
AcuI CTGAAG 4 cut(s) 298, 1269, 1323, 1835
AcyI GRCGYC 2 cut(s) 12, 90
AfaI GTAC 3 cut(s) 338, 1705, 1823
AfiI CCNNNNNNNGG 5 cut(s) 61, 163, 247, 996, 1142
AgsI TTSAA 5 cut(s) 124, 424, 1063, 1106, 1961
AjiI CACGTC 1 cut(s) 736
AjnI CCWGG 1 cut(s) 1639
Alw21I GWGCWC 2 cut(s) 1205, 1487
Alw26I GTCTC 2 cut(s) 422, 1417
Alw44I GTGCAC 1 cut(s) 1483
AlwI GGATC 2 cut(s) 1089, 1440
Ama87I CYCGRG 3 cut(s) 35, 56, 1677
AoxI GGCC 3 cut(s) 229, 264, 872
ApaLI GTGCAC 1 cut(s) 1483
ApeKI GCWGC 2 cut(s) 449, 1460
AspA2I CCTAGG 1 cut(s) 232
AspLEI GCGC 5 cut(s) 275, 511, 817, 1006, 1389
AspS9I GGNCC 5 cut(s) 31, 223, 557, 872, 1226
AsuNHI GCTAGC 1 cut(s) 481
AvaI CYCGRG 3 cut(s) 35, 56, 1677
AvaII GGWCC 4 cut(s) 31, 223, 557, 1226
AvrII CCTAGG 1 cut(s) 232
BaeGI GKGCMC 2 cut(s) 1487, 1610
BaeI ACNNNNGTAYC 2 cut(s) 1002, 1035
BanII GRGCYC 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 2 cut(s) 1205, 1487
BbvCI CCTCAGC 1 cut(s) 1160
BbvI GCAGC 2 cut(s) 436, 1472
BccI CCATC 8 cut(s) 218, 638, 653, 761, 1477, 1657, 1684, 1857
BceAI ACGGC 3 cut(s) 260, 699, 1221
BcgI CGANNNNNNTGC 2 cut(s) 1113, 1147
BciT130I CCWGG 1 cut(s) 1641
BclI TGATCA 2 cut(s) 622, 1495
BcoDI GTCTC 2 cut(s) 422, 1417
BfaI CTAG 9 cut(s) 233, 482, 498, 939, 1068, 1296, 1557, 1736, 1785
BfmI CTRYAG 2 cut(s) 1050, 1356
BfuAI ACCTGC 2 cut(s) 664, 1180
BglII AGATCT 2 cut(s) 1406, 1835
BisI GCNGC 7 cut(s) 98, 229, 264, 450, 525, 956, 1461
BlnI CCTAGG 1 cut(s) 232
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 7 cut(s) 99, 230, 265, 451, 526, 957, 1462
BmcAI AGTACT 1 cut(s) 1705
Bme1390I CCNGG 1 cut(s) 1641
Bme18I GGWCC 4 cut(s) 31, 223, 557, 1226
BmeT110I CYCGRG 3 cut(s) 35, 56, 1677
BmgBI CACGTC 1 cut(s) 736
BmgT120I GGNCC 5 cut(s) 31, 223, 557, 872, 1226
BmiI GGNNCC 6 cut(s) 32, 239, 558, 678, 772, 954
BmrFI CCNGG 1 cut(s) 1641
BmsI GCATC 6 cut(s) 496, 540, 976, 1234, 1277, 1564
BmtI GCTAGC 1 cut(s) 485
BpiI GAAGAC 1 cut(s) 134
Bpu10I CCTNAGC 2 cut(s) 966, 1160
Bpu1102I GCTNAGC 1 cut(s) 75
BpuEI CTTGAG 1 cut(s) 1313
BsaBI GATNNNNATC 1 cut(s) 1635
BsaHI GRCGYC 2 cut(s) 12, 90
BsaI GGTCTC 1 cut(s) 1417
BsaJI CCNNGG 6 cut(s) 85, 201, 226, 232, 276, 1196
BsaXI ACNNNNNCTCC 2 cut(s) 816, 846
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 163, 247, 996, 1142
Bse1I ACTGG 5 cut(s) 119, 1229, 1335, 1530, 1900
Bse8I GATNNNNATC 1 cut(s) 1635
BseBI CCWGG 1 cut(s) 1641
BseDI CCNNGG 6 cut(s) 85, 201, 226, 232, 276, 1196
BseGI GGATG 3 cut(s) 442, 555, 1732
BseJI GATNNNNATC 1 cut(s) 1635
BseLI CCNNNNNNNGG 5 cut(s) 61, 163, 247, 996, 1142
BseMII CTCAG 6 cut(s) 384, 408, 1174, 1302, 1401, 1479
BseNI ACTGG 5 cut(s) 119, 1229, 1335, 1530, 1900
BseRI GAGGAG 6 cut(s) 125, 128, 182, 401, 837, 1861
BseSI GKGCMC 2 cut(s) 1487, 1610
BseXI GCAGC 2 cut(s) 436, 1472
BseYI CCCAGC 1 cut(s) 553
BsgI GTGCAG 3 cut(s) 692, 1479, 1922
Bsh1236I CGCG 2 cut(s) 25, 228
Bsh1285I CGRYCG 1 cut(s) 355
BshFI GGCC 3 cut(s) 231, 266, 874
BsiEI CGRYCG 1 cut(s) 355
BsiHKAI GWGCWC 2 cut(s) 1205, 1487
BsiHKCI CYCGRG 3 cut(s) 35, 56, 1677
BslFI GGGAC 1 cut(s) 139
BslI CCNNNNNNNGG 5 cut(s) 61, 163, 247, 996, 1142
BsmAI GTCTC 2 cut(s) 422, 1417
BsmFI GGGAC 1 cut(s) 139
BsmI GAATGC 1 cut(s) 1804
BsnI GGCC 3 cut(s) 231, 266, 874
Bso31I GGTCTC 1 cut(s) 1417
BsoBI CYCGRG 3 cut(s) 35, 56, 1677
Bsp1286I GDGCHC 4 cut(s) 240, 1205, 1487, 1610
Bsp143I GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
Bsp1720I GCTNAGC 1 cut(s) 75
BspANI GGCC 3 cut(s) 231, 266, 874
BspCNI CTCAG 6 cut(s) 385, 409, 1173, 1301, 1402, 1480
BspFNI CGCG 2 cut(s) 25, 228
BspLI GGNNCC 6 cut(s) 32, 239, 558, 678, 772, 954
BspMI ACCTGC 2 cut(s) 664, 1180
BspOI GCTAGC 1 cut(s) 485
BspPI GGATC 2 cut(s) 1089, 1440
BspTNI GGTCTC 1 cut(s) 1417
BsrBI CCGCTC 2 cut(s) 100, 263
BsrI ACTGG 5 cut(s) 119, 1229, 1335, 1530, 1900
BssECI CCNNGG 6 cut(s) 85, 201, 226, 232, 276, 1196
BssMI GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
BssNI GRCGYC 2 cut(s) 12, 90
BssT1I CCWWGG 3 cut(s) 201, 232, 1196
Bst2UI CCWGG 1 cut(s) 1641
Bst4CI ACNGT 2 cut(s) 295, 1051
Bst6I CTCTTC 2 cut(s) 50, 1956
BstACI GRCGYC 2 cut(s) 12, 90
BstAPI GCANNNNNTGC 1 cut(s) 521
BstC8I GCNNGC 8 cut(s) 310, 404, 483, 487, 513, 1220, 1276, 1684
BstDSI CCRYGG 2 cut(s) 226, 276
BstF5I GGATG 3 cut(s) 442, 555, 1732
BstFNI CGCG 2 cut(s) 25, 228
BstHHI GCGC 5 cut(s) 275, 511, 817, 1006, 1389
BstKTI GATC 9 cut(s) 246, 355, 625, 1084, 1409, 1435, 1498, 1838, 1981
BstMAI GTCTC 2 cut(s) 422, 1417
BstMBI GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
BstMCI CGRYCG 1 cut(s) 355
BstMWI GCNNNNNNNGC 7 cut(s) 272, 521, 692, 722, 863, 971, 1352
BstNI CCWGG 1 cut(s) 1641
BstSCI CCNGG 1 cut(s) 1639
BstSFI CTRYAG 2 cut(s) 1050, 1356
BstSLI GKGCMC 2 cut(s) 1487, 1610
BstUI CGCG 2 cut(s) 25, 228
BstV1I GCAGC 2 cut(s) 436, 1472
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 2 cut(s) 1406, 1835
BstXI CCANNNNNNTGG 2 cut(s) 1342, 1559
BstYI RGATCY 2 cut(s) 1406, 1835
BsuRI GGCC 3 cut(s) 231, 266, 874
BtgI CCRYGG 2 cut(s) 226, 276
BtrI CACGTC 1 cut(s) 736
BtsCI GGATG 3 cut(s) 442, 555, 1732
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 4 cut(s) 639, 1296, 1342, 1485
BveI ACCTGC 2 cut(s) 664, 1180
Cac8I GCNNGC 8 cut(s) 310, 404, 483, 487, 513, 1220, 1276, 1684
CfoI GCGC 5 cut(s) 275, 511, 817, 1006, 1389
Cfr13I GGNCC 5 cut(s) 31, 223, 557, 872, 1226
Cfr42I CCGCGG 1 cut(s) 229
CseI GACGC 3 cut(s) 58, 79, 1224
Csp6I GTAC 3 cut(s) 337, 1704, 1822
CviAII CATG 6 cut(s) 340, 1007, 1223, 1436, 1517, 1874
CviQI GTAC 3 cut(s) 337, 1704, 1822
DpnI GATC 9 cut(s) 245, 354, 624, 1083, 1408, 1434, 1497, 1837, 1980
DpnII GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
DrdI GACNNNNNNGTC 1 cut(s) 11
DseDI GACNNNNNNGTC 1 cut(s) 11
Eam1104I CTCTTC 2 cut(s) 50, 1956
EarI CTCTTC 2 cut(s) 50, 1956
Eco130I CCWWGG 3 cut(s) 201, 232, 1196
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 1417
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 4 cut(s) 31, 223, 557, 1226
Eco57I CTGAAG 4 cut(s) 298, 1269, 1323, 1835
Eco88I CYCGRG 3 cut(s) 35, 56, 1677
EcoO109I RGGNCCY 2 cut(s) 31, 557
EcoRII CCWGG 1 cut(s) 1639
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 3 cut(s) 201, 232, 1196
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 3 cut(s) 201, 232, 1196
FaeI CATG 6 cut(s) 343, 1010, 1226, 1439, 1520, 1877
FalI AAGNNNNNCTT 2 cut(s) 1919, 1951
FaqI GGGAC 1 cut(s) 139
FatI CATG 6 cut(s) 339, 1006, 1222, 1435, 1516, 1873
FauI CCCGC 1 cut(s) 646
FbaI TGATCA 2 cut(s) 622, 1495
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 7 cut(s) 98, 229, 264, 450, 525, 956, 1461
FokI GGATG 3 cut(s) 449, 562, 1739
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 7 cut(s) 98, 229, 264, 450, 525, 956, 1461
FspBI CTAG 9 cut(s) 233, 482, 498, 939, 1068, 1296, 1557, 1736, 1785
FspI TGCGCA 1 cut(s) 1388
GlaI GCGC 5 cut(s) 274, 510, 816, 1005, 1388
GluI GCNGC 7 cut(s) 98, 229, 264, 450, 525, 956, 1461
GsaI CCCAGC 1 cut(s) 557
HaeIII GGCC 3 cut(s) 231, 266, 874
HgaI GACGC 3 cut(s) 58, 79, 1224
HhaI GCGC 5 cut(s) 275, 511, 817, 1006, 1389
Hin1I GRCGYC 2 cut(s) 12, 90
Hin1II CATG 6 cut(s) 343, 1010, 1226, 1439, 1520, 1877
Hin6I GCGC 5 cut(s) 273, 509, 815, 1004, 1387
HinP1I GCGC 5 cut(s) 273, 509, 815, 1004, 1387
HincII GTYRAC 2 cut(s) 16, 1594
HindII GTYRAC 2 cut(s) 16, 1594
HindIII AAGCTT 1 cut(s) 540
Hpy166II GTNNAC 4 cut(s) 16, 995, 1485, 1594
Hpy188III TCNNGA 4 cut(s) 103, 221, 241, 1677
Hpy8I GTNNAC 4 cut(s) 16, 995, 1485, 1594
Hpy99I CGWCG 4 cut(s) 17, 20, 74, 286
HpyAV CCTTC 3 cut(s) 55, 418, 1386
HpyCH4III ACNGT 2 cut(s) 295, 1051
HpyCH4IV ACGT 5 cut(s) 12, 18, 735, 1696, 1886
HpyF10VI GCNNNNNNNGC 7 cut(s) 272, 521, 692, 722, 863, 971, 1352
HpySE526I ACGT 5 cut(s) 12, 18, 735, 1696, 1886
Hsp92I GRCGYC 2 cut(s) 12, 90
Hsp92II CATG 6 cut(s) 343, 1010, 1226, 1439, 1520, 1877
HspAI GCGC 5 cut(s) 273, 509, 815, 1004, 1387
Ksp22I TGATCA 2 cut(s) 622, 1495
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
LmnI GCTCC 6 cut(s) 243, 776, 824, 952, 1200, 1866
Lsp1109I GCAGC 2 cut(s) 436, 1472
LweI GCATC 6 cut(s) 496, 540, 976, 1234, 1277, 1564
MaeI CTAG 9 cut(s) 233, 482, 498, 939, 1068, 1296, 1557, 1736, 1785
MaeII ACGT 5 cut(s) 12, 18, 735, 1696, 1886
MaeIII GTNAC 5 cut(s) 50, 178, 1045, 1360, 1743
MalI GATC 9 cut(s) 245, 354, 624, 1083, 1408, 1434, 1497, 1837, 1980
MbiI CCGCTC 2 cut(s) 100, 263
MboI GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
MboII GAAGA 9 cut(s) 37, 136, 139, 1262, 1334, 1828, 1889, 1892, 1973
MfeI CAATTG 2 cut(s) 1106, 1921
MflI RGATCY 2 cut(s) 1406, 1835
MhlI GDGCHC 4 cut(s) 240, 1205, 1487, 1610
MlyI GAGTC 8 cut(s) 90, 161, 215, 245, 398, 899, 1037, 1724
MmeI TCCRAC 2 cut(s) 704, 1374
MseI TTAA 7 cut(s) 588, 608, 1233, 1503, 1842, 1857, 1889
MslI CAYNNNNRTG 3 cut(s) 1440, 1539, 1716
MspA1I CMGCKG 3 cut(s) 228, 1274, 1813
MspR9I CCNGG 1 cut(s) 1641
MunI CAATTG 2 cut(s) 1106, 1921
Mva1269I GAATGC 1 cut(s) 1804
MvaI CCWGG 1 cut(s) 1641
MvnI CGCG 2 cut(s) 25, 228
MwoI GCNNNNNNNGC 7 cut(s) 272, 521, 692, 722, 863, 971, 1352
NdeII GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
NheI GCTAGC 1 cut(s) 481
NlaIII CATG 6 cut(s) 343, 1010, 1226, 1439, 1520, 1877
NlaIV GGNNCC 6 cut(s) 32, 239, 558, 678, 772, 954
NmeAIII GCCGAG 1 cut(s) 66
NmuCI GTSAC 5 cut(s) 50, 178, 1045, 1360, 1743
NsbI TGCGCA 1 cut(s) 1388
PaeR7I CTCGAG 1 cut(s) 35
PctI GAATGC 1 cut(s) 1804
PfeI GAWTC 2 cut(s) 197, 1034
PflMI CCANNNNNTGG 2 cut(s) 163, 1142
PfoI TCCNGGA 1 cut(s) 1639
PkrI GCNGC 7 cut(s) 99, 230, 265, 451, 526, 957, 1462
Ple19I CGATCG 1 cut(s) 355
PleI GAGTC 8 cut(s) 89, 160, 214, 245, 397, 898, 1036, 1724
PpsI GAGTC 8 cut(s) 89, 160, 214, 245, 397, 898, 1036, 1724
PpuMI RGGWCCY 2 cut(s) 31, 557
Psp5II RGGWCCY 2 cut(s) 31, 557
Psp6I CCWGG 1 cut(s) 1639
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 1 cut(s) 1639
PspN4I GGNNCC 6 cut(s) 32, 239, 558, 678, 772, 954
PspPI GGNCC 5 cut(s) 31, 223, 557, 872, 1226
PspPPI RGGWCCY 2 cut(s) 31, 557
PspXI VCTCGAGB 1 cut(s) 35
PsuI RGATCY 2 cut(s) 1406, 1835
PvuI CGATCG 1 cut(s) 355
PvuII CAGCTG 1 cut(s) 1274
RsaI GTAC 3 cut(s) 338, 1705, 1823
RsaNI GTAC 3 cut(s) 337, 1704, 1822
RseI CAYNNNNRTG 3 cut(s) 1440, 1539, 1716
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 7 cut(s) 588, 608, 1233, 1503, 1842, 1857, 1889
SatI GCNGC 7 cut(s) 98, 229, 264, 450, 525, 956, 1461
Sau3AI GATC 9 cut(s) 243, 352, 622, 1081, 1406, 1432, 1495, 1835, 1978
Sau96I GGNCC 5 cut(s) 31, 223, 557, 872, 1226
ScaI AGTACT 1 cut(s) 1705
SchI GAGTC 8 cut(s) 90, 161, 215, 245, 398, 899, 1037, 1724
ScrFI CCNGG 1 cut(s) 1641
SduI GDGCHC 4 cut(s) 240, 1205, 1487, 1610
SfaNI GCATC 6 cut(s) 496, 540, 976, 1234, 1277, 1564
SfcI CTRYAG 2 cut(s) 1050, 1356
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 229
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 4 cut(s) 31, 223, 557, 1226
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 3 cut(s) 1440, 1539, 1716
SmlI CTYRAG 2 cut(s) 35, 1328
SmoI CTYRAG 2 cut(s) 35, 1328
SspMI CTAG 9 cut(s) 233, 482, 498, 939, 1068, 1296, 1557, 1736, 1785
StyD4I CCNGG 1 cut(s) 1639
StyI CCWWGG 3 cut(s) 201, 232, 1196
TaaI ACNGT 2 cut(s) 295, 1051
TaiI ACGT 5 cut(s) 15, 21, 738, 1699, 1889
TaqI TCGA 7 cut(s) 15, 36, 104, 150, 195, 213, 351
TatI WGTACW 2 cut(s) 336, 1703
TauI GCSGC 5 cut(s) 100, 231, 266, 527, 958
TfiI GAWTC 2 cut(s) 197, 1034
Tru1I TTAA 7 cut(s) 588, 608, 1233, 1503, 1842, 1857, 1889
Tru9I TTAA 7 cut(s) 588, 608, 1233, 1503, 1842, 1857, 1889
TscAI CASTG 4 cut(s) 639, 1296, 1342, 1492
TseFI GTSAC 5 cut(s) 50, 178, 1045, 1360, 1743
TseI GCWGC 2 cut(s) 449, 1460
Tsp45I GTSAC 5 cut(s) 50, 178, 1045, 1360, 1743
TspDTI ATGAA 2 cut(s) 1109, 1890
TspGWI ACGGA 5 cut(s) 38, 263, 299, 552, 1625
TspRI CASTG 4 cut(s) 639, 1296, 1342, 1492
Van91I CCANNNNNTGG 2 cut(s) 163, 1142
VneI GTGCAC 1 cut(s) 1483
VpaK11BI GGWCC 4 cut(s) 31, 223, 557, 1226
XcmI CCANNNNNNNNNTGG 2 cut(s) 217, 1094
XhoI CTCGAG 1 cut(s) 35
XmaJI CCTAGG 1 cut(s) 232
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 9 cut(s) 233, 482, 498, 939, 1068, 1296, 1557, 1736, 1785
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.