SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1999 |
| Acc36I | ACCTGC | 1 cut(s) | 1999 |
| Acc65I | GGTACC | 2 cut(s) | 938, 3082 |
| AccB1I | GGYRCC | 6 cut(s) | 17, 938, 970, 3082, 3479, 3542 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1448 |
| AccBSI | CCGCTC | 1 cut(s) | 492 |
| AccI | GTMKAC | 2 cut(s) | 2523, 2632 |
| AccIII | TCCGGA | 1 cut(s) | 1219 |
| AciI | CCGC | 7 cut(s) | 21, 304, 490, 1142, 1776, 3405, 3504 |
| AclWI | GGATC | 7 cut(s) | 129, 1508, 1982, 2306, 2595, 2619, 3425 |
| AcoI | YGGCCR | 4 cut(s) | 1843, 2242, 3013, 3549 |
| AcsI | RAATTY | 6 cut(s) | 189, 281, 2382, 2985, 3032, 3139 |
| AcyI | GRCGYC | 1 cut(s) | 18 |
| AfaI | GTAC | 8 cut(s) | 98, 175, 750, 940, 1850, 2998, 3084, 3427 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1348, 1448, 3558 |
| AflIII | ACRYGT | 3 cut(s) | 897, 2726, 3175 |
| AgeI | ACCGGT | 1 cut(s) | 751 |
| AjnI | CCWGG | 4 cut(s) | 862, 1447, 2220, 2962 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2526, 2558 |
| Alw21I | GWGCWC | 6 cut(s) | 107, 163, 455, 2444, 2723, 2920 |
| Alw26I | GTCTC | 6 cut(s) | 655, 936, 1763, 1866, 2209, 2875 |
| Alw44I | GTGCAC | 2 cut(s) | 2719, 2916 |
| AlwI | GGATC | 7 cut(s) | 129, 1508, 1982, 2306, 2595, 2619, 3425 |
| Ama87I | CYCGRG | 1 cut(s) | 448 |
| Aor13HI | TCCGGA | 1 cut(s) | 1219 |
| AoxI | GGCC | 7 cut(s) | 79, 1843, 2242, 2294, 2479, 3013, 3549 |
| ApaLI | GTGCAC | 2 cut(s) | 2719, 2916 |
| ApeKI | GCWGC | 6 cut(s) | 230, 425, 887, 1201, 1730, 2739 |
| ApoI | RAATTY | 6 cut(s) | 189, 281, 2382, 2985, 3032, 3139 |
| AsiGI | ACCGGT | 1 cut(s) | 751 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3598 |
| Asp718I | GGTACC | 2 cut(s) | 938, 3082 |
| AspLEI | GCGC | 3 cut(s) | 20, 1111, 3588 |
| AspS9I | GGNCC | 6 cut(s) | 80, 200, 209, 860, 2138, 2294 |
| AsuC2I | CCSGG | 2 cut(s) | 253, 3559 |
| AsuHPI | GGTGA | 6 cut(s) | 1583, 2180, 3041, 3308, 3355, 3367 |
| AsuNHI | GCTAGC | 1 cut(s) | 3331 |
| AvaI | CYCGRG | 1 cut(s) | 448 |
| AvaII | GGWCC | 4 cut(s) | 200, 209, 860, 2138 |
| BaeGI | GKGCMC | 2 cut(s) | 2723, 2920 |
| BalI | TGGCCA | 3 cut(s) | 1845, 2244, 3551 |
| BanI | GGYRCC | 6 cut(s) | 17, 938, 970, 3082, 3479, 3542 |
| BanII | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| BbsI | GAAGAC | 4 cut(s) | 526, 957, 1080, 3239 |
| Bbv12I | GWGCWC | 6 cut(s) | 107, 163, 455, 2444, 2723, 2920 |
| BbvI | GCAGC | 6 cut(s) | 217, 437, 899, 1188, 1717, 2726 |
| BceAI | ACGGC | 3 cut(s) | 8, 31, 3530 |
| BciT130I | CCWGG | 4 cut(s) | 864, 1449, 2222, 2964 |
| BciVI | GTATCC | 4 cut(s) | 144, 631, 1388, 1591 |
| BclI | TGATCA | 3 cut(s) | 1561, 1621, 1759 |
| BcnI | CCSGG | 2 cut(s) | 253, 3559 |
| BcoDI | GTCTC | 6 cut(s) | 655, 936, 1763, 1866, 2209, 2875 |
| BfaI | CTAG | 7 cut(s) | 111, 471, 2375, 2850, 3153, 3332, 3591 |
| BfmI | CTRYAG | 4 cut(s) | 1980, 2006, 2258, 2692 |
| BfoI | RGCGCY | 1 cut(s) | 21 |
| BfuAI | ACCTGC | 1 cut(s) | 1999 |
| BfuI | GTATCC | 4 cut(s) | 144, 631, 1388, 1591 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 884 |
| BglII | AGATCT | 2 cut(s) | 613, 2155 |
| BisI | GCNGC | 7 cut(s) | 21, 231, 426, 888, 1202, 1731, 2740 |
| BlsI | GCNGC | 7 cut(s) | 22, 232, 427, 889, 1203, 1732, 2741 |
| BmcAI | AGTACT | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 6 cut(s) | 253, 864, 1449, 2222, 2964, 3559 |
| Bme18I | GGWCC | 4 cut(s) | 200, 209, 860, 2138 |
| BmeT110I | CYCGRG | 1 cut(s) | 448 |
| BmgT120I | GGNCC | 6 cut(s) | 80, 200, 209, 860, 2138, 2294 |
| BmrFI | CCNGG | 6 cut(s) | 253, 864, 1449, 2222, 2964, 3559 |
| BmrI | ACTGGG | 3 cut(s) | 1833, 1934, 2886 |
| BmsI | GCATC | 9 cut(s) | 982, 1462, 1479, 1777, 2390, 2964, 3069, 3262, 3496 |
| BmtI | GCTAGC | 1 cut(s) | 3335 |
| BmuI | ACTGGG | 3 cut(s) | 1833, 1934, 2886 |
| BpiI | GAAGAC | 4 cut(s) | 526, 957, 1080, 3239 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3319, 3351 |
| BpmI | CTGGAG | 2 cut(s) | 121, 2065 |
| BpuEI | CTTGAG | 2 cut(s) | 1877, 2408 |
| BpuMI | CCSGG | 2 cut(s) | 253, 3559 |
| Bsa29I | ATCGAT | 1 cut(s) | 124 |
| BsaAI | YACGTR | 1 cut(s) | 1579 |
| BsaBI | GATNNNNATC | 4 cut(s) | 126, 1512, 1560, 1791 |
| BsaHI | GRCGYC | 1 cut(s) | 18 |
| BsaI | GGTCTC | 2 cut(s) | 936, 1763 |
| BsaJI | CCNNGG | 8 cut(s) | 83, 903, 1015, 1176, 1447, 2962, 3546, 3558 |
| BsaWI | WCCGGW | 2 cut(s) | 751, 1219 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1348, 1448, 3558 |
| Bse118I | RCCGGY | 1 cut(s) | 751 |
| Bse3DI | GCAATG | 5 cut(s) | 466, 1188, 1432, 1687, 1714 |
| Bse8I | GATNNNNATC | 4 cut(s) | 126, 1512, 1560, 1791 |
| BseAI | TCCGGA | 1 cut(s) | 1219 |
| BseBI | CCWGG | 4 cut(s) | 864, 1449, 2222, 2964 |
| BseCI | ATCGAT | 1 cut(s) | 124 |
| BseDI | CCNNGG | 8 cut(s) | 83, 903, 1015, 1176, 1447, 2962, 3546, 3558 |
| BseGI | GGATG | 8 cut(s) | 575, 913, 1186, 1216, 1442, 2405, 2410, 3060 |
| BseJI | GATNNNNATC | 4 cut(s) | 126, 1512, 1560, 1791 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1348, 1448, 3558 |
| BseMI | GCAATG | 5 cut(s) | 466, 1188, 1432, 1687, 1714 |
| BseMII | CTCAG | 6 cut(s) | 841, 947, 1427, 1791, 1969, 2736 |
| BseRI | GAGGAG | 3 cut(s) | 97, 1331, 2762 |
| BseSI | GKGCMC | 2 cut(s) | 2723, 2920 |
| BseXI | GCAGC | 6 cut(s) | 217, 437, 899, 1188, 1717, 2726 |
| BshFI | GGCC | 7 cut(s) | 81, 1845, 2244, 2296, 2481, 3015, 3551 |
| BshNI | GGYRCC | 6 cut(s) | 17, 938, 970, 3082, 3479, 3542 |
| BshTI | ACCGGT | 1 cut(s) | 751 |
| BshVI | ATCGAT | 1 cut(s) | 124 |
| BsiHKAI | GWGCWC | 6 cut(s) | 107, 163, 455, 2444, 2723, 2920 |
| BsiHKCI | CYCGRG | 1 cut(s) | 448 |
| BsiSI | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2585, 3558 |
| BslFI | GGGAC | 2 cut(s) | 101, 3575 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1348, 1448, 3558 |
| BsmAI | GTCTC | 6 cut(s) | 655, 936, 1763, 1866, 2209, 2875 |
| BsmFI | GGGAC | 2 cut(s) | 101, 3575 |
| BsmI | GAATGC | 5 cut(s) | 1643, 1940, 2095, 2322, 2758 |
| BsnI | GGCC | 7 cut(s) | 81, 1845, 2244, 2296, 2481, 3015, 3551 |
| Bso31I | GGTCTC | 2 cut(s) | 936, 1763 |
| BsoBI | CYCGRG | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 7 cut(s) | 107, 163, 455, 1355, 2444, 2723, 2920 |
| Bsp13I | TCCGGA | 1 cut(s) | 1219 |
| Bsp19I | CCATGG | 1 cut(s) | 1176 |
| BspACI | CCGC | 7 cut(s) | 21, 304, 490, 1142, 1776, 3405, 3504 |
| BspANI | GGCC | 7 cut(s) | 81, 1845, 2244, 2296, 2481, 3015, 3551 |
| BspCNI | CTCAG | 6 cut(s) | 840, 946, 1426, 1792, 1968, 2737 |
| BspDI | ATCGAT | 1 cut(s) | 124 |
| BspEI | TCCGGA | 1 cut(s) | 1219 |
| BspMAI | CTGCAG | 3 cut(s) | 1984, 2010, 2696 |
| BspMI | ACCTGC | 1 cut(s) | 1999 |
| BspOI | GCTAGC | 1 cut(s) | 3335 |
| BspPI | GGATC | 7 cut(s) | 129, 1508, 1982, 2306, 2595, 2619, 3425 |
| BspT107I | GGYRCC | 6 cut(s) | 17, 938, 970, 3082, 3479, 3542 |
| BspTNI | GGTCTC | 2 cut(s) | 936, 1763 |
| BsrBI | CCGCTC | 1 cut(s) | 492 |
| BsrDI | GCAATG | 5 cut(s) | 466, 1188, 1432, 1687, 1714 |
| BsrFI | RCCGGY | 1 cut(s) | 751 |
| BssAI | RCCGGY | 1 cut(s) | 751 |
| BssECI | CCNNGG | 8 cut(s) | 83, 903, 1015, 1176, 1447, 2962, 3546, 3558 |
| BssNI | GRCGYC | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| Bst2UI | CCWGG | 4 cut(s) | 864, 1449, 2222, 2964 |
| Bst4CI | ACNGT | 9 cut(s) | 1104, 1240, 1405, 1550, 2262, 2655, 2675, 3029, 3324 |
| Bst6I | CTCTTC | 5 cut(s) | 320, 533, 759, 1869, 2975 |
| BstACI | GRCGYC | 1 cut(s) | 18 |
| BstBAI | YACGTR | 1 cut(s) | 1579 |
| BstC8I | GCNNGC | 4 cut(s) | 405, 1705, 2696, 3333 |
| BstDSI | CCRYGG | 3 cut(s) | 903, 1176, 3546 |
| BstEII | GGTNACC | 1 cut(s) | 1571 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1346 |
| BstF5I | GGATG | 8 cut(s) | 575, 913, 1186, 1216, 1442, 2405, 2410, 3060 |
| BstH2I | RGCGCY | 1 cut(s) | 21 |
| BstHHI | GCGC | 3 cut(s) | 20, 1111, 3588 |
| BstMAI | GTCTC | 6 cut(s) | 655, 936, 1763, 1866, 2209, 2875 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| BstNI | CCWGG | 4 cut(s) | 864, 1449, 2222, 2964 |
| BstNSI | RCATGY | 3 cut(s) | 901, 2730, 3179 |
| BstPI | GGTNACC | 1 cut(s) | 1571 |
| BstSCI | CCNGG | 6 cut(s) | 251, 862, 1447, 2220, 2962, 3557 |
| BstSFI | CTRYAG | 4 cut(s) | 1980, 2006, 2258, 2692 |
| BstSLI | GKGCMC | 2 cut(s) | 2723, 2920 |
| BstV1I | GCAGC | 6 cut(s) | 217, 437, 899, 1188, 1717, 2726 |
| BstV2I | GAAGAC | 4 cut(s) | 526, 957, 1080, 3239 |
| BstX2I | RGATCY | 5 cut(s) | 613, 2155, 2587, 2624, 3417 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1183 |
| BstYI | RGATCY | 5 cut(s) | 613, 2155, 2587, 2624, 3417 |
| Bsu15I | ATCGAT | 1 cut(s) | 124 |
| BsuI | GTATCC | 4 cut(s) | 144, 631, 1388, 1591 |
| BsuRI | GGCC | 7 cut(s) | 81, 1845, 2244, 2296, 2481, 3015, 3551 |
| BsuTUI | ATCGAT | 1 cut(s) | 124 |
| BtgI | CCRYGG | 3 cut(s) | 903, 1176, 3546 |
| BtsCI | GGATG | 8 cut(s) | 575, 913, 1186, 1216, 1442, 2405, 2410, 3060 |
| BtsI | GCAGTG | 2 cut(s) | 729, 1434 |
| BtsIMutI | CAGTG | 7 cut(s) | 729, 1236, 1410, 1434, 1555, 2436, 2660 |
| BveI | ACCTGC | 1 cut(s) | 1999 |
| Cac8I | GCNNGC | 4 cut(s) | 405, 1705, 2696, 3333 |
| CfoI | GCGC | 3 cut(s) | 20, 1111, 3588 |
| Cfr10I | RCCGGY | 1 cut(s) | 751 |
| Cfr13I | GGNCC | 6 cut(s) | 80, 200, 209, 860, 2138, 2294 |
| ClaI | ATCGAT | 1 cut(s) | 124 |
| CseI | GACGC | 2 cut(s) | 2085, 2721 |
| CsiI | ACCWGGT | 1 cut(s) | 2220 |
| Csp6I | GTAC | 8 cut(s) | 97, 174, 749, 939, 1849, 2997, 3083, 3426 |
| CspAI | ACCGGT | 1 cut(s) | 751 |
| CviQI | GTAC | 8 cut(s) | 97, 174, 749, 939, 1849, 2997, 3083, 3426 |
| DinI | GGCGCC | 1 cut(s) | 19 |
| DraI | TTTAAA | 4 cut(s) | 370, 699, 3055, 3496 |
| EaeI | YGGCCR | 4 cut(s) | 1843, 2242, 3013, 3549 |
| Eam1104I | CTCTTC | 5 cut(s) | 320, 533, 759, 1869, 2975 |
| EarI | CTCTTC | 5 cut(s) | 320, 533, 759, 1869, 2975 |
| Ecl136II | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco130I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| Eco24I | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| Eco31I | GGTCTC | 2 cut(s) | 936, 1763 |
| Eco32I | GATATC | 2 cut(s) | 128, 1596 |
| Eco47I | GGWCC | 4 cut(s) | 200, 209, 860, 2138 |
| Eco53kI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco88I | CYCGRG | 1 cut(s) | 448 |
| Eco91I | GGTNACC | 1 cut(s) | 1571 |
| EcoICRI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1346 |
| EcoO109I | RGGNCCY | 2 cut(s) | 200, 209 |
| EcoO65I | GGTNACC | 1 cut(s) | 1571 |
| EcoRI | GAATTC | 3 cut(s) | 2382, 2985, 3032 |
| EcoRII | CCWGG | 4 cut(s) | 862, 1447, 2220, 2962 |
| EcoRV | GATATC | 2 cut(s) | 128, 1596 |
| EcoT14I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| EcoT22I | ATGCAT | 3 cut(s) | 1494, 1792, 3489 |
| EcoT38I | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| EgeI | GGCGCC | 1 cut(s) | 19 |
| EheI | GGCGCC | 1 cut(s) | 19 |
| ErhI | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 281, 313, 2763, 2795 |
| FaqI | GGGAC | 2 cut(s) | 101, 3575 |
| FauI | CCCGC | 1 cut(s) | 311 |
| FbaI | TGATCA | 3 cut(s) | 1561, 1621, 1759 |
| FblI | GTMKAC | 2 cut(s) | 2523, 2632 |
| Fnu4HI | GCNGC | 7 cut(s) | 21, 231, 426, 888, 1202, 1731, 2740 |
| FokI | GGATG | 8 cut(s) | 562, 920, 1193, 1203, 1429, 2397, 2412, 3047 |
| FriOI | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| Fsp4HI | GCNGC | 7 cut(s) | 21, 231, 426, 888, 1202, 1731, 2740 |
| FspBI | CTAG | 7 cut(s) | 111, 471, 2375, 2850, 3153, 3332, 3591 |
| GlaI | GCGC | 3 cut(s) | 19, 1110, 3587 |
| GluI | GCNGC | 7 cut(s) | 21, 231, 426, 888, 1202, 1731, 2740 |
| GsuI | CTGGAG | 2 cut(s) | 121, 2065 |
| HaeII | RGCGCY | 1 cut(s) | 21 |
| HaeIII | GGCC | 7 cut(s) | 81, 1845, 2244, 2296, 2481, 3015, 3551 |
| HapII | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2585, 3558 |
| HgaI | GACGC | 2 cut(s) | 2085, 2721 |
| HhaI | GCGC | 3 cut(s) | 20, 1111, 3588 |
| Hin1I | GRCGYC | 1 cut(s) | 18 |
| Hin6I | GCGC | 3 cut(s) | 18, 1109, 3586 |
| HinP1I | GCGC | 3 cut(s) | 18, 1109, 3586 |
| HincII | GTYRAC | 2 cut(s) | 418, 2227 |
| HindII | GTYRAC | 2 cut(s) | 418, 2227 |
| HindIII | AAGCTT | 2 cut(s) | 633, 3473 |
| HpaI | GTTAAC | 1 cut(s) | 418 |
| HpaII | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2585, 3558 |
| HphI | GGTGA | 6 cut(s) | 1583, 2180, 3041, 3308, 3355, 3367 |
| Hpy166II | GTNNAC | 8 cut(s) | 418, 2227, 2524, 2633, 2721, 2846, 2918, 3607 |
| Hpy8I | GTNNAC | 8 cut(s) | 418, 2227, 2524, 2633, 2721, 2846, 2918, 3607 |
| HpyCH4III | ACNGT | 9 cut(s) | 1104, 1240, 1405, 1550, 2262, 2655, 2675, 3029, 3324 |
| HpyCH4IV | ACGT | 3 cut(s) | 480, 553, 1578 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| HpySE526I | ACGT | 3 cut(s) | 480, 553, 1578 |
| Hsp92I | GRCGYC | 1 cut(s) | 18 |
| HspAI | GCGC | 3 cut(s) | 18, 1109, 3586 |
| KasI | GGCGCC | 1 cut(s) | 17 |
| Kpn2I | TCCGGA | 1 cut(s) | 1219 |
| KpnI | GGTACC | 2 cut(s) | 942, 3086 |
| Ksp22I | TGATCA | 3 cut(s) | 1561, 1621, 1759 |
| KspAI | GTTAAC | 1 cut(s) | 418 |
| Lsp1109I | GCAGC | 6 cut(s) | 217, 437, 899, 1188, 1717, 2726 |
| LweI | GCATC | 9 cut(s) | 982, 1462, 1479, 1777, 2390, 2964, 3069, 3262, 3496 |
| MabI | ACCWGGT | 1 cut(s) | 2220 |
| MaeI | CTAG | 7 cut(s) | 111, 471, 2375, 2850, 3153, 3332, 3591 |
| MaeII | ACGT | 3 cut(s) | 480, 553, 1578 |
| MaeIII | GTNAC | 6 cut(s) | 441, 1571, 2564, 2575, 3023, 3296 |
| MbiI | CCGCTC | 1 cut(s) | 492 |
| MfeI | CAATTG | 2 cut(s) | 1518, 2636 |
| MflI | RGATCY | 5 cut(s) | 613, 2155, 2587, 2624, 3417 |
| MhlI | GDGCHC | 7 cut(s) | 107, 163, 455, 1355, 2444, 2723, 2920 |
| MlsI | TGGCCA | 3 cut(s) | 1845, 2244, 3551 |
| MluNI | TGGCCA | 3 cut(s) | 1845, 2244, 3551 |
| Mly113I | GGCGCC | 1 cut(s) | 18 |
| MlyI | GAGTC | 3 cut(s) | 649, 1868, 2830 |
| MmeI | TCCRAC | 7 cut(s) | 563, 1123, 1550, 2053, 2524, 2848, 3298 |
| Mox20I | TGGCCA | 3 cut(s) | 1845, 2244, 3551 |
| Mph1103I | ATGCAT | 3 cut(s) | 1494, 1792, 3489 |
| MroI | TCCGGA | 1 cut(s) | 1219 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3598 |
| MscI | TGGCCA | 3 cut(s) | 1845, 2244, 3551 |
| MslI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1929, 3065 |
| Msp20I | TGGCCA | 3 cut(s) | 1845, 2244, 3551 |
| MspA1I | CMGCKG | 4 cut(s) | 1079, 1776, 2144, 3407 |
| MspI | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2585, 3558 |
| MspR9I | CCNGG | 6 cut(s) | 253, 864, 1449, 2222, 2964, 3559 |
| MunI | CAATTG | 2 cut(s) | 1518, 2636 |
| Mva1269I | GAATGC | 5 cut(s) | 1643, 1940, 2095, 2322, 2758 |
| MvaI | CCWGG | 4 cut(s) | 864, 1449, 2222, 2964 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| NarI | GGCGCC | 1 cut(s) | 18 |
| NciI | CCSGG | 2 cut(s) | 253, 3559 |
| NcoI | CCATGG | 1 cut(s) | 1176 |
| NheI | GCTAGC | 1 cut(s) | 3331 |
| NmeAIII | GCCGAG | 1 cut(s) | 2322 |
| NmuCI | GTSAC | 3 cut(s) | 1571, 2564, 3296 |
| NsiI | ATGCAT | 3 cut(s) | 1494, 1792, 3489 |
| NspI | RCATGY | 3 cut(s) | 901, 2730, 3179 |
| PaeR7I | CTCGAG | 1 cut(s) | 448 |
| PaqCI | CACCTGC | 1 cut(s) | 1999 |
| PciI | ACATGT | 3 cut(s) | 897, 2726, 3175 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| PctI | GAATGC | 5 cut(s) | 1643, 1940, 2095, 2322, 2758 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3598 |
| PflFI | GACNNNGTC | 1 cut(s) | 2655 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1448 |
| PfoI | TCCNGGA | 1 cut(s) | 862 |
| PinAI | ACCGGT | 1 cut(s) | 751 |
| PkrI | GCNGC | 7 cut(s) | 22, 232, 427, 889, 1203, 1732, 2741 |
| PleI | GAGTC | 3 cut(s) | 648, 1867, 2829 |
| PluTI | GGCGCC | 1 cut(s) | 21 |
| PpsI | GAGTC | 3 cut(s) | 648, 1867, 2829 |
| Ppu21I | YACGTR | 1 cut(s) | 1579 |
| PpuMI | RGGWCCY | 2 cut(s) | 200, 209 |
| PscI | ACATGT | 3 cut(s) | 897, 2726, 3175 |
| Psp124BI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| Psp5II | RGGWCCY | 2 cut(s) | 200, 209 |
| Psp6I | CCWGG | 4 cut(s) | 862, 1447, 2220, 2962 |
| PspEI | GGTNACC | 1 cut(s) | 1571 |
| PspGI | CCWGG | 4 cut(s) | 862, 1447, 2220, 2962 |
| PspPI | GGNCC | 6 cut(s) | 80, 200, 209, 860, 2138, 2294 |
| PspPPI | RGGWCCY | 2 cut(s) | 200, 209 |
| PspXI | VCTCGAGB | 1 cut(s) | 448 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 699, 731 |
| PstI | CTGCAG | 3 cut(s) | 1984, 2010, 2696 |
| PsuI | RGATCY | 5 cut(s) | 613, 2155, 2587, 2624, 3417 |
| PsyI | GACNNNGTC | 1 cut(s) | 2655 |
| PvuII | CAGCTG | 2 cut(s) | 1079, 2144 |
| RsaI | GTAC | 8 cut(s) | 98, 175, 750, 940, 1850, 2998, 3084, 3427 |
| RsaNI | GTAC | 8 cut(s) | 97, 174, 749, 939, 1849, 2997, 3083, 3426 |
| RseI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1929, 3065 |
| SacI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| SatI | GCNGC | 7 cut(s) | 21, 231, 426, 888, 1202, 1731, 2740 |
| Sau96I | GGNCC | 6 cut(s) | 80, 200, 209, 860, 2138, 2294 |
| ScaI | AGTACT | 1 cut(s) | 98 |
| SchI | GAGTC | 3 cut(s) | 649, 1868, 2830 |
| ScrFI | CCNGG | 6 cut(s) | 253, 864, 1449, 2222, 2964, 3559 |
| SduI | GDGCHC | 7 cut(s) | 107, 163, 455, 1355, 2444, 2723, 2920 |
| SexAI | ACCWGGT | 1 cut(s) | 2220 |
| SfaNI | GCATC | 9 cut(s) | 982, 1462, 1479, 1777, 2390, 2964, 3069, 3262, 3496 |
| SfcI | CTRYAG | 4 cut(s) | 1980, 2006, 2258, 2692 |
| SfoI | GGCGCC | 1 cut(s) | 19 |
| Sfr274I | CTCGAG | 1 cut(s) | 448 |
| SinI | GGWCC | 4 cut(s) | 200, 209, 860, 2138 |
| SlaI | CTCGAG | 1 cut(s) | 448 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1929, 3065 |
| SmlI | CTYRAG | 3 cut(s) | 448, 1856, 2387 |
| SmoI | CTYRAG | 3 cut(s) | 448, 1856, 2387 |
| SsiI | CCGC | 7 cut(s) | 21, 304, 490, 1142, 1776, 3405, 3504 |
| SspDI | GGCGCC | 1 cut(s) | 17 |
| SspI | AATATT | 2 cut(s) | 1267, 3599 |
| SspMI | CTAG | 7 cut(s) | 111, 471, 2375, 2850, 3153, 3332, 3591 |
| SstI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| StyD4I | CCNGG | 6 cut(s) | 251, 862, 1447, 2220, 2962, 3557 |
| StyI | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| TaaI | ACNGT | 9 cut(s) | 1104, 1240, 1405, 1550, 2262, 2655, 2675, 3029, 3324 |
| TaiI | ACGT | 3 cut(s) | 483, 556, 1581 |
| TaqI | TCGA | 7 cut(s) | 124, 157, 221, 449, 638, 2105, 3203 |
| TatI | WGTACW | 4 cut(s) | 96, 173, 1848, 2996 |
| TauI | GCSGC | 1 cut(s) | 23 |
| TscAI | CASTG | 7 cut(s) | 729, 1243, 1410, 1441, 1555, 2436, 2660 |
| TseFI | GTSAC | 3 cut(s) | 1571, 2564, 3296 |
| TseI | GCWGC | 6 cut(s) | 230, 425, 887, 1201, 1730, 2739 |
| Tsp45I | GTSAC | 3 cut(s) | 1571, 2564, 3296 |
| TspGWI | ACGGA | 5 cut(s) | 120, 435, 892, 1785, 1928 |
| TspRI | CASTG | 7 cut(s) | 729, 1243, 1410, 1441, 1555, 2436, 2660 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2655 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1448 |
| VneI | GTGCAC | 2 cut(s) | 2719, 2916 |
| VpaK11BI | GGWCC | 4 cut(s) | 200, 209, 860, 2138 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1346 |
| XapI | RAATTY | 6 cut(s) | 189, 281, 2382, 2985, 3032, 3139 |
| XbaI | TCTAGA | 2 cut(s) | 470, 3590 |
| XceI | RCATGY | 3 cut(s) | 901, 2730, 3179 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 270, 2777, 3321 |
| XhoI | CTCGAG | 1 cut(s) | 448 |
| XmiI | GTMKAC | 2 cut(s) | 2523, 2632 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3598 |
| XspI | CTAG | 7 cut(s) | 111, 471, 2375, 2850, 3153, 3332, 3591 |
| ZrmI | AGTACT | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 3 cut(s) | 1494, 1792, 3489 |