Rroxscaffold_1G00075720
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000851
Physical Location & Seq
Reverse (-)
96354770 .. 96358302
3533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00075720.1

Sequence Viewer

Length: 2034 bp
ATGGACTTAGACGTCGACGTTTCGCGGTGGGTCCTCGAGTTCCTCTTCCGTGACCGCGAGAAGGAGAGCGTCGCTAAGCGAGTCCTCGGCGTCTTGCCGCTCTTGAACCACGACTGGCGGTTGAAGAAGACCCTCCTCCTCCGAACAATCGAGTCCCAAATCTTGGACGAGGCTTCTGTCACCGAAACCCTCCTCGAATCCTTGGAGTCCATCGAGGTTCTGGACCGCGGCCAAGGGCTCCCGATCACGCACTCAATGAGAGCGGCCTACTGCGCCGTGGCGACGGATTGCACGGTCAAGTTTTTGGCTGGCTTCAGAGGGAAGCCGAGTGGAAAGTACATGGAGGCAGTCGATCGGATTTGGAGAGGTAGGGTTAGGATTTTGGAGGAGTCTGAGGGTTGCGAGCTGGTATCGGCTGAGTTGAAGGAGAGAAGGGATGAGGTGGAGGCTGGGATTTGGGATATCAAGGTTTCTAAGAAGCTAGCGAGCCTGAACACTAGAAATGATGCGCTGGCATTGGTTGTGGCGTATGTGGAGGAAGCTTTGGGGATGCTGGGTCCTCCGTTTATTGCTTGGGCTGTTGGATTTAATATGCACAAGGGTAGTTTAAGCTCGGAAGCTGATCAGGTTGCAGTGGAGAGTGATGGTAATGCGGGTGATGGGTGTGAAGTGCAGCTTCGAATGGCGAATGGGGCTGAATTGGAGGTGCAAATGGCAAATGGGGCTGATTTGGACGTGCAAATGGGGAATGGGGCTGATTTGGACGTGCAAATGAGGAATGGGGTTGATTTGGGTGATGGCTCCAAATTGGAGGTGAATGGGTCTGAATTGGAAGCGCAGAGAGGAGCTAATGTCAATTCTGGGTCTGAACAGGAGGCACAAAGGGCGAATGGGCCTAATGTCTATTCAGAGTCTGAATTAGAGGCACAAAGGGTGAATGGGGCAATTGATGGTAGTGCTAGGTCTGAACAGGAGCCGCAAGGGGCTAAGGGGGCTAATGTTAGTGATGCCTGTGAATGGGAGGCGCATGATACTAATGTGGGTGATGAGTCTGAATCACAAATTGTGACTGTAGCTTATTTCAATTCTAGGTCTGAAATGAGTCACCATACAATGAATGGTGTTCAATTGCAGATAGTGGGGGCAGAAAGGTCTCCACCTAATGGAAACCATCGTGTCCTCAGCTCTGAACCTGCAACTACAGAGAAAGAAACTCCAAGGAGCACGGCACTTAGACGCAGGCATGGACCAGTTAAGATTAGAGATGCTGAAGATGTGGGTATGGAAGCATCAGCTGGCATGTATAACTCAGTGTCTAGTGCTGAATTTAGAAAAGTGCAAGAAGAACTCAAGTCCAGTGTTTTGGCTCTACAAGCTGTAGTGACAGACCCACTTCCTTATGCTTTGCGCAAGTCGGAAATTGTAAGATCTGAGTTGGGAATGAGACCTGTGGGTCATGTAAGTGGAGAAAATGGAGGTGCAGCAAATCCATCTGTTGCAAAGTGCACCGAGCCTGATCAGTTTAATAATGATAATCATGGAAACCACACCAGTCATCAGAATGATGTTCCCCAACCTAGTGGAAAAGAAAATGATGCACCAAATCTGTCTGTTGACAAGGGAAAGGGCACGGATTATGTTCAGATGGGTGATGTCACTCCTGGAAATCCATCTTGCAGTTTTCAGAATAATGTTTCCCGAGCTGGCTTGATGGAACGTAATAGTACTGCCCATACTTATGAGTGGGATGACTCGCTAGGTATGTCACCTGAACAAACAAATAGTAAGGGGAGGCTTCACCTACCTAGTCCAAAAAGGAATGCTGTTTCTCCGCTGAAGAAGTATGAGGATAATAGATCTTTTAAGAGGAGAAAAGTTAAGAGATGGAGCTTACATGAAGAAGATACGTTAAGGACTGGTGTGCAGAAGTATGGCAGAGGCAATTGGAAGTTTATCTTAGATACATACCGAGATGTATTTGAAGAGAGAACCAAGGTTGATCTAAAGGACAAGTGGAGAAATATGACGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

677

Amino Acids

74.62

Weight (kDa)

5.31

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 627 - 675 5.3e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 11, 1452
AatII GACGTC 1 cut(s) 15
Acc16I TGCGCA 1 cut(s) 1409
Acc36I ACCTGC 1 cut(s) 1201
AccB7I CCANNNNNTGG 2 cut(s) 163, 1163
AccBSI CCGCTC 2 cut(s) 100, 263
AccI GTMKAC 1 cut(s) 15
AccII CGCG 3 cut(s) 25, 57, 228
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 1 cut(s) 1325
AcuI CTGAAG 3 cut(s) 298, 1290, 1856
AcyI GRCGYC 2 cut(s) 12, 90
AfaI GTAC 2 cut(s) 338, 1726
AfiI CCNNNNNNNGG 4 cut(s) 61, 163, 1017, 1163
AgsI TTSAA 6 cut(s) 106, 124, 424, 1084, 1127, 1982
AjiI CACGTC 2 cut(s) 736, 766
AjnI CCWGG 1 cut(s) 1660
Alw21I GWGCWC 2 cut(s) 1226, 1508
Alw26I GTCTC 2 cut(s) 1158, 1438
Alw44I GTGCAC 1 cut(s) 1504
AlwNI CAGNNNCTG 1 cut(s) 914
Ama87I CYCGRG 2 cut(s) 35, 1698
AoxI GGCC 3 cut(s) 229, 264, 893
ApaLI GTGCAC 1 cut(s) 1504
ApeKI GCWGC 2 cut(s) 673, 1481
ApoI RAATTY 1 cut(s) 1325
AspLEI GCGC 5 cut(s) 275, 511, 838, 1027, 1410
AspS9I GGNCC 5 cut(s) 31, 223, 557, 893, 1247
AsuII TTCGAA 1 cut(s) 679
AsuNHI GCTAGC 1 cut(s) 481
AvaI CYCGRG 2 cut(s) 35, 1698
AvaII GGWCC 4 cut(s) 31, 223, 557, 1247
BaeGI GKGCMC 2 cut(s) 1508, 1631
BaeI ACNNNNGTAYC 2 cut(s) 1023, 1056
BanII GRGCYC 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 2 cut(s) 1226, 1508
BbvCI CCTCAGC 1 cut(s) 1181
BbvI GCAGC 2 cut(s) 685, 1493
BceAI ACGGC 2 cut(s) 260, 1242
BciT130I CCWGG 1 cut(s) 1662
BclI TGATCA 2 cut(s) 622, 1516
BcoDI GTCTC 2 cut(s) 1158, 1438
BfaI CTAG 8 cut(s) 482, 498, 960, 1089, 1317, 1578, 1757, 1806
BfmI CTRYAG 3 cut(s) 1071, 1200, 1377
BfuAI ACCTGC 1 cut(s) 1201
BglII AGATCT 2 cut(s) 1427, 1856
BisI GCNGC 6 cut(s) 98, 229, 264, 674, 977, 1482
BlpI GCTNAGC 1 cut(s) 75
BlsI GCNGC 6 cut(s) 99, 230, 265, 675, 978, 1483
BmcAI AGTACT 1 cut(s) 1726
Bme1390I CCNGG 1 cut(s) 1662
Bme18I GGWCC 4 cut(s) 31, 223, 557, 1247
BmeT110I CYCGRG 2 cut(s) 35, 1698
BmgBI CACGTC 2 cut(s) 736, 766
BmgT120I GGNCC 5 cut(s) 31, 223, 557, 893, 1247
BmiI GGNNCC 5 cut(s) 32, 239, 558, 802, 975
BmrFI CCNGG 1 cut(s) 1662
BmsI GCATC 6 cut(s) 496, 540, 997, 1255, 1298, 1585
BmtI GCTAGC 1 cut(s) 485
BpiI GAAGAC 1 cut(s) 134
Bpu10I CCTNAGC 2 cut(s) 987, 1181
Bpu1102I GCTNAGC 1 cut(s) 75
Bpu14I TTCGAA 1 cut(s) 679
BpuEI CTTGAG 1 cut(s) 1334
BsaHI GRCGYC 2 cut(s) 12, 90
BsaI GGTCTC 2 cut(s) 1158, 1438
BsaJI CCNNGG 7 cut(s) 85, 201, 226, 232, 276, 1217, 1992
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 163, 1017, 1163
Bse1I ACTGG 5 cut(s) 119, 1250, 1356, 1551, 1921
BseBI CCWGG 1 cut(s) 1662
BseDI CCNNGG 7 cut(s) 85, 201, 226, 232, 276, 1217, 1992
BseGI GGATG 3 cut(s) 442, 555, 1753
BseLI CCNNNNNNNGG 4 cut(s) 61, 163, 1017, 1163
BseMII CTCAG 5 cut(s) 384, 408, 1195, 1323, 1422
BseNI ACTGG 5 cut(s) 119, 1250, 1356, 1551, 1921
BseRI GAGGAG 6 cut(s) 125, 128, 182, 401, 858, 1882
BseSI GKGCMC 2 cut(s) 1508, 1631
BseXI GCAGC 2 cut(s) 685, 1493
BseYI CCCAGC 2 cut(s) 449, 553
BsgI GTGCAG 3 cut(s) 692, 1500, 1943
Bsh1236I CGCG 3 cut(s) 25, 57, 228
Bsh1285I CGRYCG 1 cut(s) 355
BshFI GGCC 3 cut(s) 231, 266, 895
BsiEI CGRYCG 1 cut(s) 355
BsiHKAI GWGCWC 2 cut(s) 1226, 1508
BsiHKCI CYCGRG 2 cut(s) 35, 1698
BslFI GGGAC 1 cut(s) 139
BslI CCNNNNNNNGG 4 cut(s) 61, 163, 1017, 1163
BsmAI GTCTC 2 cut(s) 1158, 1438
BsmFI GGGAC 1 cut(s) 139
BsmI GAATGC 1 cut(s) 1825
BsnI GGCC 3 cut(s) 231, 266, 895
Bso31I GGTCTC 2 cut(s) 1158, 1438
BsoBI CYCGRG 2 cut(s) 35, 1698
Bsp119I TTCGAA 1 cut(s) 679
Bsp1286I GDGCHC 4 cut(s) 240, 1226, 1508, 1631
Bsp143I GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
Bsp1720I GCTNAGC 1 cut(s) 75
BspANI GGCC 3 cut(s) 231, 266, 895
BspCNI CTCAG 5 cut(s) 385, 409, 1194, 1322, 1423
BspFNI CGCG 3 cut(s) 25, 57, 228
BspLI GGNNCC 5 cut(s) 32, 239, 558, 802, 975
BspMI ACCTGC 1 cut(s) 1201
BspOI GCTAGC 1 cut(s) 485
BspT104I TTCGAA 1 cut(s) 679
BspTNI GGTCTC 2 cut(s) 1158, 1438
BsrBI CCGCTC 2 cut(s) 100, 263
BsrI ACTGG 5 cut(s) 119, 1250, 1356, 1551, 1921
BssECI CCNNGG 7 cut(s) 85, 201, 226, 232, 276, 1217, 1992
BssMI GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
BssNI GRCGYC 2 cut(s) 12, 90
BssT1I CCWWGG 4 cut(s) 201, 232, 1217, 1992
Bst2UI CCWGG 1 cut(s) 1662
Bst4CI ACNGT 2 cut(s) 295, 1072
Bst6I CTCTTC 2 cut(s) 50, 1977
BstACI GRCGYC 2 cut(s) 12, 90
BstBI TTCGAA 1 cut(s) 679
BstC8I GCNNGC 8 cut(s) 310, 404, 483, 487, 513, 1241, 1297, 1705
BstDSI CCRYGG 2 cut(s) 226, 276
BstF5I GGATG 3 cut(s) 442, 555, 1753
BstFNI CGCG 3 cut(s) 25, 57, 228
BstHHI GCGC 5 cut(s) 275, 511, 838, 1027, 1410
BstKTI GATC 7 cut(s) 246, 355, 625, 1430, 1519, 1859, 2002
BstMAI GTCTC 2 cut(s) 1158, 1438
BstMBI GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
BstMCI CGRYCG 1 cut(s) 355
BstMWI GCNNNNNNNGC 6 cut(s) 272, 692, 722, 884, 992, 1373
BstNI CCWGG 1 cut(s) 1662
BstNSI RCATGY 1 cut(s) 1303
BstSCI CCNGG 1 cut(s) 1660
BstSFI CTRYAG 3 cut(s) 1071, 1200, 1377
BstSLI GKGCMC 2 cut(s) 1508, 1631
BstUI CGCG 3 cut(s) 25, 57, 228
BstV1I GCAGC 2 cut(s) 685, 1493
BstV2I GAAGAC 1 cut(s) 134
BstX2I RGATCY 2 cut(s) 1427, 1856
BstXI CCANNNNNNTGG 2 cut(s) 1363, 1580
BstYI RGATCY 2 cut(s) 1427, 1856
BsuRI GGCC 3 cut(s) 231, 266, 895
BtgI CCRYGG 2 cut(s) 226, 276
BtrI CACGTC 2 cut(s) 736, 766
BtsCI GGATG 3 cut(s) 442, 555, 1753
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 3 cut(s) 639, 1317, 1363
BveI ACCTGC 1 cut(s) 1201
Cac8I GCNNGC 8 cut(s) 310, 404, 483, 487, 513, 1241, 1297, 1705
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 5 cut(s) 275, 511, 838, 1027, 1410
Cfr13I GGNCC 5 cut(s) 31, 223, 557, 893, 1247
Cfr42I CCGCGG 1 cut(s) 229
CseI GACGC 3 cut(s) 58, 79, 1245
Csp6I GTAC 2 cut(s) 337, 1725
CviAII CATG 7 cut(s) 340, 1028, 1244, 1300, 1457, 1538, 1895
CviQI GTAC 2 cut(s) 337, 1725
DpnI GATC 7 cut(s) 245, 354, 624, 1429, 1518, 1858, 2001
DpnII GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
DrdI GACNNNNNNGTC 2 cut(s) 11, 1452
DseDI GACNNNNNNGTC 2 cut(s) 11, 1452
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 2 cut(s) 50, 1977
EarI CTCTTC 2 cut(s) 50, 1977
Eco130I CCWWGG 4 cut(s) 201, 232, 1217, 1992
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 2 cut(s) 1158, 1438
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 4 cut(s) 31, 223, 557, 1247
Eco57I CTGAAG 3 cut(s) 298, 1290, 1856
Eco88I CYCGRG 2 cut(s) 35, 1698
EcoO109I RGGNCCY 2 cut(s) 31, 557
EcoRII CCWGG 1 cut(s) 1660
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 4 cut(s) 201, 232, 1217, 1992
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 4 cut(s) 201, 232, 1217, 1992
FaeI CATG 7 cut(s) 343, 1031, 1247, 1303, 1460, 1541, 1898
FalI AAGNNNNNCTT 4 cut(s) 660, 692, 1940, 1972
FaqI GGGAC 1 cut(s) 139
FatI CATG 7 cut(s) 339, 1027, 1243, 1299, 1456, 1537, 1894
FauI CCCGC 1 cut(s) 646
FbaI TGATCA 2 cut(s) 622, 1516
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 6 cut(s) 98, 229, 264, 674, 977, 1482
FokI GGATG 3 cut(s) 449, 562, 1760
FriOI GRGCYC 1 cut(s) 240
Fsp4HI GCNGC 6 cut(s) 98, 229, 264, 674, 977, 1482
FspBI CTAG 8 cut(s) 482, 498, 960, 1089, 1317, 1578, 1757, 1806
FspI TGCGCA 1 cut(s) 1409
GlaI GCGC 5 cut(s) 274, 510, 837, 1026, 1409
GluI GCNGC 6 cut(s) 98, 229, 264, 674, 977, 1482
GsaI CCCAGC 2 cut(s) 453, 557
HaeIII GGCC 3 cut(s) 231, 266, 895
HgaI GACGC 3 cut(s) 58, 79, 1245
HhaI GCGC 5 cut(s) 275, 511, 838, 1027, 1410
Hin1I GRCGYC 2 cut(s) 12, 90
Hin1II CATG 7 cut(s) 343, 1031, 1247, 1303, 1460, 1541, 1898
Hin6I GCGC 5 cut(s) 273, 509, 836, 1025, 1408
HinP1I GCGC 5 cut(s) 273, 509, 836, 1025, 1408
HincII GTYRAC 2 cut(s) 16, 1615
HindII GTYRAC 2 cut(s) 16, 1615
HindIII AAGCTT 1 cut(s) 540
Hpy166II GTNNAC 3 cut(s) 16, 1506, 1615
Hpy188III TCNNGA 4 cut(s) 103, 221, 241, 1698
Hpy8I GTNNAC 3 cut(s) 16, 1506, 1615
Hpy99I CGWCG 4 cut(s) 17, 20, 74, 286
HpyAV CCTTC 3 cut(s) 55, 418, 426
HpyCH4III ACNGT 2 cut(s) 295, 1072
HpyCH4IV ACGT 6 cut(s) 12, 18, 735, 765, 1717, 1907
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 692, 722, 884, 992, 1373
HpySE526I ACGT 6 cut(s) 12, 18, 735, 765, 1717, 1907
Hsp92I GRCGYC 2 cut(s) 12, 90
Hsp92II CATG 7 cut(s) 343, 1031, 1247, 1303, 1460, 1541, 1898
HspAI GCGC 5 cut(s) 273, 509, 836, 1025, 1408
Ksp22I TGATCA 2 cut(s) 622, 1516
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
LmnI GCTCC 6 cut(s) 243, 806, 845, 973, 1221, 1887
Lsp1109I GCAGC 2 cut(s) 685, 1493
LweI GCATC 6 cut(s) 496, 540, 997, 1255, 1298, 1585
MaeI CTAG 8 cut(s) 482, 498, 960, 1089, 1317, 1578, 1757, 1806
MaeII ACGT 6 cut(s) 12, 18, 735, 765, 1717, 1907
MaeIII GTNAC 7 cut(s) 50, 178, 1066, 1103, 1381, 1654, 1764
MalI GATC 7 cut(s) 245, 354, 624, 1429, 1518, 1858, 2001
MbiI CCGCTC 2 cut(s) 100, 263
MboI GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
MboII GAAGA 9 cut(s) 37, 136, 139, 1283, 1355, 1849, 1910, 1913, 1994
MfeI CAATTG 3 cut(s) 945, 1127, 1942
MflI RGATCY 2 cut(s) 1427, 1856
MhlI GDGCHC 4 cut(s) 240, 1226, 1508, 1631
MlyI GAGTC 8 cut(s) 90, 161, 215, 398, 920, 1058, 1111, 1745
MmeI TCCRAC 2 cut(s) 562, 1395
MseI TTAA 7 cut(s) 588, 608, 1254, 1524, 1863, 1878, 1910
MslI CAYNNNNRTG 3 cut(s) 1461, 1560, 1737
MspA1I CMGCKG 3 cut(s) 228, 1295, 1834
MspR9I CCNGG 1 cut(s) 1662
MunI CAATTG 3 cut(s) 945, 1127, 1942
Mva1269I GAATGC 1 cut(s) 1825
MvaI CCWGG 1 cut(s) 1662
MvnI CGCG 3 cut(s) 25, 57, 228
MwoI GCNNNNNNNGC 6 cut(s) 272, 692, 722, 884, 992, 1373
NdeII GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
NheI GCTAGC 1 cut(s) 481
NlaIII CATG 7 cut(s) 343, 1031, 1247, 1303, 1460, 1541, 1898
NlaIV GGNNCC 5 cut(s) 32, 239, 558, 802, 975
NmeAIII GCCGAG 2 cut(s) 66, 351
NmuCI GTSAC 7 cut(s) 50, 178, 1066, 1103, 1381, 1654, 1764
NsbI TGCGCA 1 cut(s) 1409
NspI RCATGY 1 cut(s) 1303
NspV TTCGAA 1 cut(s) 679
PaeR7I CTCGAG 1 cut(s) 35
PctI GAATGC 1 cut(s) 1825
PfeI GAWTC 2 cut(s) 197, 1055
PflMI CCANNNNNTGG 2 cut(s) 163, 1163
PfoI TCCNGGA 1 cut(s) 1660
PkrI GCNGC 6 cut(s) 99, 230, 265, 675, 978, 1483
Ple19I CGATCG 1 cut(s) 355
PleI GAGTC 8 cut(s) 89, 160, 214, 397, 919, 1057, 1110, 1745
PpsI GAGTC 8 cut(s) 89, 160, 214, 397, 919, 1057, 1110, 1745
PpuMI RGGWCCY 2 cut(s) 31, 557
Psp5II RGGWCCY 2 cut(s) 31, 557
Psp6I CCWGG 1 cut(s) 1660
PspFI CCCAGC 2 cut(s) 449, 553
PspGI CCWGG 1 cut(s) 1660
PspN4I GGNNCC 5 cut(s) 32, 239, 558, 802, 975
PspPI GGNCC 5 cut(s) 31, 223, 557, 893, 1247
PspPPI RGGWCCY 2 cut(s) 31, 557
PspXI VCTCGAGB 1 cut(s) 35
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 2 cut(s) 1427, 1856
PvuI CGATCG 1 cut(s) 355
PvuII CAGCTG 1 cut(s) 1295
RsaI GTAC 2 cut(s) 338, 1726
RsaNI GTAC 2 cut(s) 337, 1725
RseI CAYNNNNRTG 3 cut(s) 1461, 1560, 1737
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 7 cut(s) 588, 608, 1254, 1524, 1863, 1878, 1910
SatI GCNGC 6 cut(s) 98, 229, 264, 674, 977, 1482
Sau3AI GATC 7 cut(s) 243, 352, 622, 1427, 1516, 1856, 1999
Sau96I GGNCC 5 cut(s) 31, 223, 557, 893, 1247
ScaI AGTACT 1 cut(s) 1726
SchI GAGTC 8 cut(s) 90, 161, 215, 398, 920, 1058, 1111, 1745
ScrFI CCNGG 1 cut(s) 1662
SduI GDGCHC 4 cut(s) 240, 1226, 1508, 1631
SfaNI GCATC 6 cut(s) 496, 540, 997, 1255, 1298, 1585
SfcI CTRYAG 3 cut(s) 1071, 1200, 1377
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 229
SfuI TTCGAA 1 cut(s) 679
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 4 cut(s) 31, 223, 557, 1247
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 3 cut(s) 1461, 1560, 1737
SmlI CTYRAG 2 cut(s) 35, 1349
SmoI CTYRAG 2 cut(s) 35, 1349
SspMI CTAG 8 cut(s) 482, 498, 960, 1089, 1317, 1578, 1757, 1806
StyD4I CCNGG 1 cut(s) 1660
StyI CCWWGG 4 cut(s) 201, 232, 1217, 1992
TaaI ACNGT 2 cut(s) 295, 1072
TaiI ACGT 6 cut(s) 15, 21, 738, 768, 1720, 1910
TaqI TCGA 7 cut(s) 15, 36, 150, 195, 213, 351, 679
TatI WGTACW 2 cut(s) 336, 1724
TauI GCSGC 4 cut(s) 100, 231, 266, 979
TfiI GAWTC 2 cut(s) 197, 1055
Tru1I TTAA 7 cut(s) 588, 608, 1254, 1524, 1863, 1878, 1910
Tru9I TTAA 7 cut(s) 588, 608, 1254, 1524, 1863, 1878, 1910
TscAI CASTG 3 cut(s) 639, 1317, 1363
TseFI GTSAC 7 cut(s) 50, 178, 1066, 1103, 1381, 1654, 1764
TseI GCWGC 2 cut(s) 673, 1481
Tsp45I GTSAC 7 cut(s) 50, 178, 1066, 1103, 1381, 1654, 1764
TspDTI ATGAA 2 cut(s) 1130, 1911
TspGWI ACGGA 4 cut(s) 38, 299, 552, 1646
TspRI CASTG 3 cut(s) 639, 1317, 1363
Van91I CCANNNNNTGG 2 cut(s) 163, 1163
VneI GTGCAC 1 cut(s) 1504
VpaK11BI GGWCC 4 cut(s) 31, 223, 557, 1247
XapI RAATTY 1 cut(s) 1325
XceI RCATGY 1 cut(s) 1303
XcmI CCANNNNNNNNNTGG 2 cut(s) 217, 1115
XhoI CTCGAG 1 cut(s) 35
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 8 cut(s) 482, 498, 960, 1089, 1317, 1578, 1757, 1806
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.