Prupe.6G041700_v2.0.a1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000851
Physical Location & Seq
Reverse (-)
3069176 .. 3073485
4310 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G041700.1

Sequence Viewer

Length: 2544 bp
ATGGACTCAGACGTCGACGTTTCCCGGTGGGTCCTCGAGCTCCTTATCCGAGACCGCGAGAAGGAGTGCATTGCCAAGAGAGTCCTCGCAGTTGCGCCATTCTCGGACCAAGACTATCGCTTGAAGAAGACCGTGCTCCTCCGAACCATCGAGTGCGATGTTTACGACGCTTTGGTCAGCGAAACGATGCTAGAAACGCTTGAAATGATCGAGGATTTGGATCTTAGCCAAGGTATTGCGACCACGGACTCCATGAAAGCCGCGTACTTGGCCGTGGCCACTGAGTGTACGGTCAAGTTCTTGGTGGGCCTCATGGGAAAGCCGAGCGGGAAGTACTTGGAGGCTGTTGATCGGATTTGGAGAGGGAGGGTTGGGGCTTTGGAGCGGTCAGAGACGAGCCAGCTGATATCTGCCGAGTTGAGGCAGAGAATGGACGAGGTCGAGGCGGGGGTTTGGGATTTGAGAGTGTCGAAGAAGTTGTCAAGGATGAACACGAGGAACGATGCGCTGAGATTGGTTGCGGTATATGTGAAGGAAGCTTTGGCGTTAATGGGACCTCCGTTTATTACTTGGGCTGTAAGATTGAATGTGCCCAAGGAAGTTGCCGACTTGGAGGGTGATCAGATTGCTGTGGCGAAAGAGGCTAATGTGGGTGGTGGGCCTGAAGCGGAGGCGCAAACAAAGAATGGGGCTAATGTGGGTGATAGGTCTGAATTGGAGGCACAAACGGAGAATGGGGCTAATGCCGGTGATGGCTCTGAACTGGAGGCTCAAATGGCGAATGCGGCTGATGTTGGGGGTGAGTCTGAATTGGAGGCTCAAATGGAGAATGGTGCTAATGTTGGCGGTGAGTCTGAATTGGAAGCTCAAATGGAGAATGGGGATAATGTGCAAATGGCTAGTGGAACTAATGCGGTTGATGGGTCTGAATTGGAGAAGGAAGTGGTTAATGAGACTAATGCAGGGGACGGGTCTCAGTTGGAGTTGCAAACTACAAATGGGACTAATGCGGCTGTTGAATCTGTACTGGAGGTGCAAATGGTGAGTGGGGCTAATGTGGGGGATGGGTCTGAATTGGAGGCGCACACTGTTAATGCGACTAATGTGGGTAGTGAGTCTGAATTGGAGGCACAACTAGTGAATGTGACTAATTTGGGTGATGGGTGTGAATTGCAGGCGCAAAGGGTGAATGAGGCTAGTGGGAGTTGTGGGTTTGAATCGGGTCCACAACCGATGACTGGGGTCCAATTGCGGGAAGTCGGGGCAAGGCGCATGCCACCTACTATGAGCCGGGATTTGGTTTTGAATGAAATGGATTCTGGATTCACGAACAGAGAAGTGCTCAGGTTCGGTGATGATCAGGTTCATGACACAGGCGTGGGTTTGCCTAGTACGAATAGGGAACTGGTTCTCAGTTTAGATCCAACCACGAAAGATAAAGAAATTCAGAGGAGTACGGGACTTAGATACAAGCACCTTGCTCATAGGCGCACTAGAGGACCGGTTAGGATTCGGGACGCTGAAGATTTGGGCACAGACTTATCAAATAGCAAATATGATTCCCTGTCTACCCCTGAAGTTAGCAATGCACAAGAAGCACTTAGATCCAGTATTTTGGAGCTACAAGCAGTAGTGACAGATCCACTTCCAGATGCTTTACGAGTGGCTGAAACCATAAGATTGGATTTGGCAATGAAATCTGTGAATGCAGGGGCAGAAAATCTCTCTGTTGAGAAGGGTGCTGGACCTGTTCAATCTCATAATGATAATCTTGGAAATATGTCTGTTCCCCAATCTAGTGGAAAAGAAAAGGATGTACCAACTCCTCCTGTCAACCAGGGAAAAGGAACTGAGTCTGTTCAAACAGATGATGCCAATCTTGGAAATCCGTCTTCCAGCAATAAGAATAATGCTCCTCGACCAATGACAGATCCACTTCCGGATGCTTTACGAGTGGCTGAAACCATAAGATTGGATTTGGCCATGAAATCTGTGAATGTAGGGGCAGAAAATCTCTCTGTCGAGATAGGTGCTGGACCTGTTCAATCTCATAATGATAATCTTGGAAATGTGTCCGTTCCCCAATCTAGTGGAAAAGAAAAGGATGTACCAAATCCTCCAGTCAACCAGGGAAAAGGAACTGAGTCTGTTCAAACTGATGATGTCAATCTTGGAAATCCGTCTTCCAGCAATAAGAATAATGCCCCTCGACCTAGCTTGATGGAACGTAATACTACTGCTCATACTTACGAGTGGGATGACTCAATAGATACGTCACAAGGAGCAATGAAAGATCCAGGCAGGCTTTACTTACCTAGCCCAAAGAGGAATGCTGTTTCTCCATTGAAGAAGTATGAGAATAAGAGATTTACTAAGAGAAGAAAAGCTAAGAGATGGAGCTTATTGGAAGAAGACACCTTAAGGACTGGTGTACAGAAGTATGGCGCAGGAAACTGGAAATTTATTTTGAATAGCTACCGCGAGATATTTGAAGAGAGAACTGAGGTTGATTTGAAGGACAAATGGAGAAATATGACACGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

848

Amino Acids

91.94

Weight (kDa)

4.78

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 11, 173
AatII GACGTC 1 cut(s) 15
AccBSI CCGCTC 2 cut(s) 327, 385
AccI GTMKAC 2 cut(s) 15, 1568
AccII CGCG 3 cut(s) 57, 263, 2481
AccIII TCCGGA 1 cut(s) 1939
AclWI GGATC 6 cut(s) 228, 1415, 1599, 1634, 1925, 2288
AcoI YGGCCR 3 cut(s) 270, 276, 1980
AcsI RAATTY 2 cut(s) 1443, 2459
AcuI CTGAAG 3 cut(s) 684, 1542, 1596
AcyI GRCGYC 1 cut(s) 12
AdeI CACNNNGTG 1 cut(s) 285
AfaI GTAC 9 cut(s) 266, 289, 335, 1026, 1393, 1456, 1818, 2109, 2433
AfiI CCNNNNNNNGG 5 cut(s) 61, 420, 1238, 1252, 1297
AflII CTTAAG 1 cut(s) 2419
AgeI ACCGGT 1 cut(s) 1501
AhlI ACTAGT 1 cut(s) 1135
AjnI CCWGG 3 cut(s) 1836, 2127, 2296
AjuI GAANNNNNNNTTGG 2 cut(s) 524, 556
AleI CACNNNNGTG 1 cut(s) 1376
AluBI AGCT 9 cut(s) 40, 403, 539, 866, 1621, 2217, 2387, 2400, 2475
AluI AGCT 9 cut(s) 40, 403, 539, 866, 1621, 2217, 2387, 2400, 2475
Alw21I GWGCWC 3 cut(s) 42, 138, 1344
Alw26I GTCTC 4 cut(s) 45, 386, 947, 978
AlwI GGATC 6 cut(s) 228, 1415, 1599, 1634, 1925, 2288
Ama87I CYCGRG 1 cut(s) 35
Aor13HI TCCGGA 1 cut(s) 1939
AoxI GGCC 5 cut(s) 270, 276, 307, 659, 1980
ApoI RAATTY 2 cut(s) 1443, 2459
ArsI GACNNNNNNTTYG 2 cut(s) 464, 496
AsiGI ACCGGT 1 cut(s) 1501
Asp700I GAANNNNTTC 1 cut(s) 1407
AspLEI GCGC 8 cut(s) 97, 508, 676, 1084, 1180, 1272, 1491, 2447
AsuC2I CCSGG 2 cut(s) 25, 1292
AsuHPI GGTGA 9 cut(s) 629, 713, 761, 812, 860, 1054, 1169, 1198, 1364
AvaI CYCGRG 1 cut(s) 35
AvaII GGWCC 8 cut(s) 31, 106, 554, 1223, 1243, 1499, 1745, 2036
BaeGI GKGCMC 2 cut(s) 594, 1535
BalI TGGCCA 2 cut(s) 278, 1982
BanII GRGCYC 1 cut(s) 42
BauI CACGAG 1 cut(s) 493
BbsI GAAGAC 4 cut(s) 134, 1884, 2175, 2418
Bbv12I GWGCWC 3 cut(s) 42, 138, 1344
BccI CCATC 7 cut(s) 155, 746, 914, 1058, 1154, 2215, 2388
BceAI ACGGC 1 cut(s) 257
BcgI CGANNNNNNTGC 2 cut(s) 2012, 2046
BciT130I CCWGG 3 cut(s) 1838, 2129, 2298
BclI TGATCA 2 cut(s) 619, 1357
BcnI CCSGG 2 cut(s) 25, 1292
BcoDI GTCTC 4 cut(s) 45, 386, 947, 978
BcuI ACTAGT 1 cut(s) 1135
BfrI CTTAAG 1 cut(s) 2419
BisI GCNGC 3 cut(s) 261, 786, 1011
BlsI GCNGC 3 cut(s) 262, 787, 1012
BmcAI AGTACT 1 cut(s) 335
Bme1390I CCNGG 5 cut(s) 25, 1292, 1838, 2129, 2298
Bme18I GGWCC 8 cut(s) 31, 106, 554, 1223, 1243, 1499, 1745, 2036
BmeT110I CYCGRG 1 cut(s) 35
BmiI GGNNCC 4 cut(s) 32, 555, 1224, 1244
BmrFI CCNGG 5 cut(s) 25, 1292, 1838, 2129, 2298
BmrI ACTGGG 1 cut(s) 1248
BmsI GCATC 5 cut(s) 177, 493, 1642, 1861, 1933
BmuI ACTGGG 1 cut(s) 1248
BoxI GACNNNNGTC 1 cut(s) 1241
BpiI GAAGAC 4 cut(s) 134, 1884, 2175, 2418
BplI GAGNNNNNCTC 2 cut(s) 1326, 1358
BpmI CTGGAG 3 cut(s) 785, 1049, 2103
Bpu10I CCTNAGC 1 cut(s) 1343
BpuMI CCSGG 2 cut(s) 25, 1292
BsaBI GATNNNNATC 3 cut(s) 219, 1875, 2166
BsaHI GRCGYC 1 cut(s) 12
BsaI GGTCTC 2 cut(s) 45, 978
BsaJI CCNNGG 6 cut(s) 229, 243, 273, 594, 1837, 2128
BsaWI WCCGGW 2 cut(s) 1501, 1939
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 420, 1238, 1252, 1297
Bse118I RCCGGY 2 cut(s) 746, 1501
Bse1I ACTGG 8 cut(s) 768, 1032, 1243, 1410, 1608, 2120, 2431, 2459
Bse3DI GCAATG 4 cut(s) 69, 1591, 1698, 2292
Bse8I GATNNNNATC 3 cut(s) 219, 1875, 2166
BseAI TCCGGA 1 cut(s) 1939
BseBI CCWGG 3 cut(s) 1838, 2129, 2298
BseDI CCNNGG 6 cut(s) 229, 243, 273, 594, 1837, 2128
BseGI GGATG 6 cut(s) 492, 1069, 1819, 1948, 2110, 2263
BseJI GATNNNNATC 3 cut(s) 219, 1875, 2166
BseLI CCNNNNNNNGG 5 cut(s) 61, 420, 1238, 1252, 1297
BseMI GCAATG 4 cut(s) 69, 1591, 1698, 2292
BseMII CTCAG 9 cut(s) 21, 273, 500, 989, 1357, 1426, 1842, 2133, 2493
BseNI ACTGG 8 cut(s) 768, 1032, 1243, 1410, 1608, 2120, 2431, 2459
BseRI GAGGAG 4 cut(s) 128, 1465, 1815, 1905
BseSI GKGCMC 2 cut(s) 594, 1535
Bsh1236I CGCG 3 cut(s) 57, 263, 2481
BshFI GGCC 5 cut(s) 272, 278, 309, 661, 1982
BshTI ACCGGT 1 cut(s) 1501
BsiHKAI GWGCWC 3 cut(s) 42, 138, 1344
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 5 cut(s) 25, 747, 1291, 1502, 1940
BslFI GGGAC 5 cut(s) 567, 980, 1015, 1473, 1529
BslI CCNNNNNNNGG 5 cut(s) 61, 420, 1238, 1252, 1297
BsmAI GTCTC 4 cut(s) 45, 386, 947, 978
BsmBI CGTCTC 1 cut(s) 386
BsmFI GGGAC 5 cut(s) 567, 980, 1015, 1473, 1529
BsmI GAATGC 3 cut(s) 787, 1711, 2335
BsnI GGCC 5 cut(s) 272, 278, 309, 661, 1982
Bso31I GGTCTC 2 cut(s) 45, 978
BsoBI CYCGRG 1 cut(s) 35
Bsp1286I GDGCHC 5 cut(s) 42, 138, 594, 1344, 1535
Bsp13I TCCGGA 1 cut(s) 1939
Bsp1407I TGTACA 1 cut(s) 2431
BspANI GGCC 5 cut(s) 272, 278, 309, 661, 1982
BspCNI CTCAG 9 cut(s) 20, 274, 501, 988, 1356, 1425, 1843, 2134, 2494
BspEI TCCGGA 1 cut(s) 1939
BspFNI CGCG 3 cut(s) 57, 263, 2481
BspHI TCATGA 1 cut(s) 1366
BspLI GGNNCC 4 cut(s) 32, 555, 1224, 1244
BspPI GGATC 6 cut(s) 228, 1415, 1599, 1634, 1925, 2288
BspTI CTTAAG 1 cut(s) 2419
BspTNI GGTCTC 2 cut(s) 45, 978
BsrBI CCGCTC 2 cut(s) 327, 385
BsrDI GCAATG 4 cut(s) 69, 1591, 1698, 2292
BsrFI RCCGGY 2 cut(s) 746, 1501
BsrGI TGTACA 1 cut(s) 2431
BsrI ACTGG 8 cut(s) 768, 1032, 1243, 1410, 1608, 2120, 2431, 2459
BssAI RCCGGY 2 cut(s) 746, 1501
BssECI CCNNGG 6 cut(s) 229, 243, 273, 594, 1837, 2128
BssNI GRCGYC 1 cut(s) 12
BssSI CACGAG 1 cut(s) 493
BssT1I CCWWGG 2 cut(s) 229, 594
Bst2BI CACGAG 1 cut(s) 493
Bst2UI CCWGG 3 cut(s) 1838, 2129, 2298
Bst4CI ACNGT 4 cut(s) 133, 292, 1090, 2541
Bst6I CTCTTC 1 cut(s) 2487
BstACI GRCGYC 1 cut(s) 12
BstAFI CTTAAG 1 cut(s) 2419
BstAUI TGTACA 1 cut(s) 2431
BstC8I GCNNGC 4 cut(s) 401, 1176, 1274, 2303
BstDSI CCRYGG 2 cut(s) 243, 273
BstF5I GGATG 6 cut(s) 492, 1069, 1819, 1948, 2110, 2263
BstFNI CGCG 3 cut(s) 57, 263, 2481
BstHHI GCGC 8 cut(s) 97, 508, 676, 1084, 1180, 1272, 1491, 2447
BstMAI GTCTC 4 cut(s) 45, 386, 947, 978
BstMWI GCNNNNNNNGC 6 cut(s) 196, 269, 641, 776, 785, 1595
BstNI CCWGG 3 cut(s) 1838, 2129, 2298
BstNSI RCATGY 1 cut(s) 1276
BstPAI GACNNNNGTC 1 cut(s) 1241
BstSCI CCNGG 5 cut(s) 23, 1290, 1836, 2127, 2296
BstSLI GKGCMC 2 cut(s) 594, 1535
BstUI CGCG 3 cut(s) 57, 263, 2481
BstV2I GAAGAC 4 cut(s) 134, 1884, 2175, 2418
BstX2I RGATCY 6 cut(s) 220, 1420, 1604, 1639, 1930, 2293
BstXI CCANNNNNNTGG 5 cut(s) 1615, 1681, 1799, 1972, 2090
BstYI RGATCY 6 cut(s) 220, 1420, 1604, 1639, 1930, 2293
BsuRI GGCC 5 cut(s) 272, 278, 309, 661, 1982
BtgI CCRYGG 2 cut(s) 243, 273
BtgZI GCGATG 1 cut(s) 171
BtsCI GGATG 6 cut(s) 492, 1069, 1819, 1948, 2110, 2263
BtsIMutI CAGTG 2 cut(s) 279, 1086
Cac8I GCNNGC 4 cut(s) 401, 1176, 1274, 2303
CciI TCATGA 1 cut(s) 1366
CfoI GCGC 8 cut(s) 97, 508, 676, 1084, 1180, 1272, 1491, 2447
Cfr10I RCCGGY 2 cut(s) 746, 1501
CseI GACGC 2 cut(s) 176, 1526
Csp6I GTAC 9 cut(s) 265, 288, 334, 1025, 1392, 1455, 1817, 2108, 2432
CspAI ACCGGT 1 cut(s) 1501
CviAII CATG 5 cut(s) 253, 313, 1273, 1367, 1984
CviQI GTAC 9 cut(s) 265, 288, 334, 1025, 1392, 1455, 1817, 2108, 2432
DraIII CACNNNGTG 1 cut(s) 285
DrdI GACNNNNNNGTC 2 cut(s) 11, 173
DseDI GACNNNNNNGTC 2 cut(s) 11, 173
EaeI YGGCCR 3 cut(s) 270, 276, 1980
Eam1104I CTCTTC 1 cut(s) 2487
EarI CTCTTC 1 cut(s) 2487
Ecl136II GAGCTC 1 cut(s) 40
Eco130I CCWWGG 2 cut(s) 229, 594
Eco24I GRGCYC 1 cut(s) 42
Eco31I GGTCTC 2 cut(s) 45, 978
Eco32I GATATC 1 cut(s) 408
Eco47I GGWCC 8 cut(s) 31, 106, 554, 1223, 1243, 1499, 1745, 2036
Eco53kI GAGCTC 1 cut(s) 40
Eco57I CTGAAG 3 cut(s) 684, 1542, 1596
Eco88I CYCGRG 1 cut(s) 35
EcoICRI GAGCTC 1 cut(s) 40
EcoO109I RGGNCCY 2 cut(s) 31, 554
EcoRII CCWGG 3 cut(s) 1836, 2127, 2296
EcoRV GATATC 1 cut(s) 408
EcoT14I CCWWGG 2 cut(s) 229, 594
EcoT38I GRGCYC 1 cut(s) 42
ErhI CCWWGG 2 cut(s) 229, 594
Esp3I CGTCTC 1 cut(s) 386
FaeI CATG 5 cut(s) 256, 316, 1276, 1370, 1987
FalI AAGNNNNNCTT 2 cut(s) 1584, 1616
FaqI GGGAC 5 cut(s) 567, 980, 1015, 1473, 1529
FatI CATG 5 cut(s) 252, 312, 1272, 1366, 1983
FauI CCCGC 3 cut(s) 320, 439, 1245
FbaI TGATCA 2 cut(s) 619, 1357
FblI GTMKAC 2 cut(s) 15, 1568
Fnu4HI GCNGC 3 cut(s) 261, 786, 1011
FokI GGATG 6 cut(s) 499, 1076, 1826, 1955, 2117, 2270
FriOI GRGCYC 1 cut(s) 42
Fsp4HI GCNGC 3 cut(s) 261, 786, 1011
GlaI GCGC 8 cut(s) 96, 507, 675, 1083, 1179, 1271, 1490, 2446
GluI GCNGC 3 cut(s) 261, 786, 1011
GsuI CTGGAG 3 cut(s) 785, 1049, 2103
HaeIII GGCC 5 cut(s) 272, 278, 309, 661, 1982
HapII CCGG 5 cut(s) 25, 747, 1291, 1502, 1940
HgaI GACGC 2 cut(s) 176, 1526
HhaI GCGC 8 cut(s) 97, 508, 676, 1084, 1180, 1272, 1491, 2447
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 5 cut(s) 256, 316, 1276, 1370, 1987
Hin6I GCGC 8 cut(s) 95, 506, 674, 1082, 1178, 1270, 1489, 2445
HinP1I GCGC 8 cut(s) 95, 506, 674, 1082, 1178, 1270, 1489, 2445
HincII GTYRAC 3 cut(s) 16, 1834, 2125
HindII GTYRAC 3 cut(s) 16, 1834, 2125
HindIII AAGCTT 1 cut(s) 537
HpaII CCGG 5 cut(s) 25, 747, 1291, 1502, 1940
HphI GGTGA 9 cut(s) 629, 713, 761, 812, 860, 1054, 1169, 1198, 1364
Hpy166II GTNNAC 8 cut(s) 16, 163, 288, 1226, 1569, 1834, 2125, 2432
Hpy188III TCNNGA 7 cut(s) 1320, 1327, 1367, 1514, 1649, 1940, 2023
Hpy8I GTNNAC 8 cut(s) 16, 163, 288, 1226, 1569, 1834, 2125, 2432
Hpy99I CGWCG 3 cut(s) 17, 20, 170
HpyAV CCTTC 5 cut(s) 55, 526, 931, 1729, 2509
HpyCH4III ACNGT 4 cut(s) 133, 292, 1090, 2541
HpyCH4IV ACGT 4 cut(s) 12, 18, 2227, 2273
HpyCH4V TGCA 8 cut(s) 69, 892, 962, 988, 1036, 1174, 1589, 1709
HpyF10VI GCNNNNNNNGC 6 cut(s) 196, 269, 641, 776, 785, 1595
HpySE526I ACGT 4 cut(s) 12, 18, 2227, 2273
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 5 cut(s) 256, 316, 1276, 1370, 1987
HspAI GCGC 8 cut(s) 95, 506, 674, 1082, 1178, 1270, 1489, 2445
Kpn2I TCCGGA 1 cut(s) 1939
Ksp22I TGATCA 2 cut(s) 619, 1357
LmnI GCTCC 7 cut(s) 45, 141, 382, 1618, 1918, 2282, 2397
LweI GCATC 5 cut(s) 177, 493, 1642, 1861, 1933
MaeII ACGT 4 cut(s) 12, 18, 2227, 2273
MaeIII GTNAC 3 cut(s) 1144, 1633, 2274
MbiI CCGCTC 2 cut(s) 327, 385
MfeI CAATTG 1 cut(s) 1247
MflI RGATCY 6 cut(s) 220, 1420, 1604, 1639, 1930, 2293
MhlI GDGCHC 5 cut(s) 42, 138, 594, 1344, 1535
MlsI TGGCCA 2 cut(s) 278, 1982
MluNI TGGCCA 2 cut(s) 278, 1982
MlyI GAGTC 8 cut(s) 90, 242, 812, 860, 1124, 1862, 2153, 2255
MmeI TCCRAC 2 cut(s) 960, 1448
Mox20I TGGCCA 2 cut(s) 278, 1982
MroI TCCGGA 1 cut(s) 1939
MroXI GAANNNNTTC 1 cut(s) 1407
MscI TGGCCA 2 cut(s) 278, 1982
MseI TTAA 4 cut(s) 548, 948, 1092, 2420
MslI CAYNNNNRTG 1 cut(s) 1376
Msp20I TGGCCA 2 cut(s) 278, 1982
MspA1I CMGCKG 1 cut(s) 403
MspCI CTTAAG 1 cut(s) 2419
MspI CCGG 5 cut(s) 25, 747, 1291, 1502, 1940
MspR9I CCNGG 5 cut(s) 25, 1292, 1838, 2129, 2298
MunI CAATTG 1 cut(s) 1247
Mva1269I GAATGC 3 cut(s) 787, 1711, 2335
MvaI CCWGG 3 cut(s) 1838, 2129, 2298
MvnI CGCG 3 cut(s) 57, 263, 2481
MwoI GCNNNNNNNGC 6 cut(s) 196, 269, 641, 776, 785, 1595
NciI CCSGG 2 cut(s) 25, 1292
NlaIII CATG 5 cut(s) 256, 316, 1276, 1370, 1987
NlaIV GGNNCC 4 cut(s) 32, 555, 1224, 1244
NmeAIII GCCGAG 2 cut(s) 348, 439
NmuCI GTSAC 3 cut(s) 1144, 1633, 2274
NspI RCATGY 1 cut(s) 1276
OliI CACNNNNGTG 1 cut(s) 1376
PaeI GCATGC 1 cut(s) 1276
PaeR7I CTCGAG 1 cut(s) 35
PagI TCATGA 1 cut(s) 1366
PctI GAATGC 3 cut(s) 787, 1711, 2335
PdmI GAANNNNTTC 1 cut(s) 1407
PfeI GAWTC 6 cut(s) 1019, 1217, 1316, 1323, 1510, 1559
PflFI GACNNNGTC 1 cut(s) 437
PinAI ACCGGT 1 cut(s) 1501
PkrI GCNGC 3 cut(s) 262, 787, 1012
PleI GAGTC 8 cut(s) 89, 242, 811, 859, 1123, 1861, 2152, 2255
PpsI GAGTC 8 cut(s) 89, 242, 811, 859, 1123, 1861, 2152, 2255
PpuMI RGGWCCY 2 cut(s) 31, 554
PshAI GACNNNNGTC 1 cut(s) 1241
Psp124BI GAGCTC 1 cut(s) 42
Psp5II RGGWCCY 2 cut(s) 31, 554
Psp6I CCWGG 3 cut(s) 1836, 2127, 2296
PspGI CCWGG 3 cut(s) 1836, 2127, 2296
PspN4I GGNNCC 4 cut(s) 32, 555, 1224, 1244
PspPPI RGGWCCY 2 cut(s) 31, 554
PspXI VCTCGAGB 1 cut(s) 35
PsuI RGATCY 6 cut(s) 220, 1420, 1604, 1639, 1930, 2293
PsyI GACNNNGTC 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 9 cut(s) 266, 289, 335, 1026, 1393, 1456, 1818, 2109, 2433
RsaNI GTAC 9 cut(s) 265, 288, 334, 1025, 1392, 1455, 1817, 2108, 2432
RseI CAYNNNNRTG 1 cut(s) 1376
SacI GAGCTC 1 cut(s) 42
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 4 cut(s) 548, 948, 1092, 2420
SatI GCNGC 3 cut(s) 261, 786, 1011
ScaI AGTACT 1 cut(s) 335
SchI GAGTC 8 cut(s) 90, 242, 812, 860, 1124, 1862, 2153, 2255
ScrFI CCNGG 5 cut(s) 25, 1292, 1838, 2129, 2298
SduI GDGCHC 5 cut(s) 42, 138, 594, 1344, 1535
SfaNI GCATC 5 cut(s) 177, 493, 1642, 1861, 1933
Sfr274I CTCGAG 1 cut(s) 35
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 8 cut(s) 31, 106, 554, 1223, 1243, 1499, 1745, 2036
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 1376
SmlI CTYRAG 2 cut(s) 35, 2419
SmoI CTYRAG 2 cut(s) 35, 2419
SpeI ACTAGT 1 cut(s) 1135
SphI GCATGC 1 cut(s) 1276
SstI GAGCTC 1 cut(s) 42
StyD4I CCNGG 5 cut(s) 23, 1290, 1836, 2127, 2296
StyI CCWWGG 2 cut(s) 229, 594
TaaI ACNGT 4 cut(s) 133, 292, 1090, 2541
TaiI ACGT 4 cut(s) 15, 21, 2230, 2276
TaqI TCGA 9 cut(s) 15, 36, 150, 210, 441, 470, 1918, 2022, 2209
TatI WGTACW 3 cut(s) 333, 1024, 2431
TauI GCSGC 3 cut(s) 263, 788, 1013
TfiI GAWTC 6 cut(s) 1019, 1217, 1316, 1323, 1510, 1559
Tru1I TTAA 4 cut(s) 548, 948, 1092, 2420
Tru9I TTAA 4 cut(s) 548, 948, 1092, 2420
TscAI CASTG 2 cut(s) 286, 1093
TseFI GTSAC 3 cut(s) 1144, 1633, 2274
Tsp45I GTSAC 3 cut(s) 1144, 1633, 2274
TspDTI ATGAA 7 cut(s) 269, 503, 1323, 1355, 1709, 2000, 2303
TspGWI ACGGA 6 cut(s) 260, 549, 743, 1878, 2065, 2169
TspRI CASTG 2 cut(s) 286, 1093
Tth111I GACNNNGTC 1 cut(s) 437
Vha464I CTTAAG 1 cut(s) 2419
VpaK11BI GGWCC 8 cut(s) 31, 106, 554, 1223, 1243, 1499, 1745, 2036
XapI RAATTY 2 cut(s) 1443, 2459
XceI RCATGY 1 cut(s) 1276
XhoI CTCGAG 1 cut(s) 35
XmiI GTMKAC 2 cut(s) 15, 1568
XmnI GAANNNNTTC 1 cut(s) 1407
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.