Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000851

Physical Location & Seq

Genomic Coordinates Reverse (-)

3249550 .. 3252668

Gene Structure 3119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g04150.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

ATGGACCCAGACGTCGACGTTTCGCGGTGGGTCATCGAGCTTCTCCTTCGGGACCGCGAGAAGGATTGCATTGCCAAGAAGCTCCTCGCAGTCGCACCCTTCTCGGACCAAGACTATCGCTTGAAGAAGACCGTACTCCTCCGGACGATCGAGTGCGAAGTCTACGAAGCTTCGGTCTCCGAAACGATCCTCGAAACGCTTGAAATGATTGAGGATTTGGATATCAGAGAAGGCATTACGATCACGGAATCCATGAAAGCCGCCTACTGCTCTGTGGCCACTGAGTGTACGGTCAAGTTCTTAGCGGGTTTTATGGGAAAGCCTAGTGGGAAATACTTGGAGGCCGTGGATCGGATTTGGAGAGGGAGGGTTGGGGTTTTGGAGCGGTCTGGGAGGAGCCAGTTGGTATCGGCGGAGTTGAGGCATCGAATGGAGGAGATCGAGGCAGGGGTTTGGGATTTGCGAGTGTCGAAGAAGTTGTCGAGTATGAACACGAGGAATGATGCGCTGAGATCGGTTTCGGTTTATGTAAAGGAAGCTTTGGCGTTGTTAGGACCTCCGTTTATTACTTGGGCTATTAGATTGAATGTGCCCATGGAAGTTGCCGACTTGGAAGCTGATCACATTGCAGTGGTCAATGAGGCTAATGTGGGTGGTGGGTCTGAATTCGAAGGGCAAATGGAGAAGGGGGCTAATGCGCGTAATGGACCTGAATTGGAGGTACAAATGGCGAATGGGGCTAATGCGGGGGAAGGTTGTTCTGACTTGGAGGCTCAAATGGCGAATGGAGCTAATGAGGGTGACGGTGGGTCTGAATTGGAGTGTCAAATAGCGAATAGGGCTAATGTGGGTGGTGGTGCATCTGAATTGGAGGATCAACTGCGGGACGAGGCAAATGTGGGGCCCAGTGGGTCGGAGTTAGAAGCTGAAGTGGTGAGGGTGACTAATGTGGGTGGTCGGTCCAATATGGAGGTGCAAATGGAGAATGGGACTGGTGTGGGTGATAAGTCTGAATTGGAGGAGCAAATGGTTAATGGGACTAATGTGGGTCACGGGTTCCAGTTGGAGGAGCAAACTAAGAATGGGACTAATGTGGCCGGTCACTCTGAATTGGAGGCACAAATGGTGAGTAGAGGTAGAGCTAATGTGGTCGATGGGTCTCAAAGGCATGCACAAACTACGAATGGGGCGCAGCCAGTGAATGGGACTAATGTACGTGATGGGTGTACATATGAGGGGCAAATGGTCAACGGGGCTAATGTTAGTAATGGGTCTGAATTGGGTCCTATATTGGTTGCAGTCCCATTGAAGGAAGTTCGGGCAGGGAGCTCGCTGCCTACTGTGAGCCGGGGCTTGGTTTTGAATGATTTGGTTGAAATAGATTCTGGATTCAGAAACAGAGAAGTACACAGGTCGGCTGATGATCAGGCTCCTGGTCAAGTGAATGAGACAGGCTTGGCTATACCTAGTCGGAATGGGGAACTGGGTCTCAGTATTGACCATACCACGAAAGATAAAGAAAATCAGAGGTCTGCTATGCCTAGACGCAAGCACCTTGCTCATAGACGCACCAGAGGACCGATTAGGATTAGGGATGCTGAAGATTTAGGCACAGATGTATCAGATGGAAAATATGGTTCCTTAGATACCCCTGAAGTTAACAGAGCACAGGAAGCACTTAAATCCAGTGTTTCGGAGCTCCAAGAATTAGTGACAGATCCACTTCCAGATGCTTTGCGAGTGTCTGAAACTGTAAGATCTAGTTTGGCAATGAGATCTGTAAGTCACGTAAATGGAAAAGATGTAGGTGCAGAAAATCCATCTATCGAGAAGGGTGCTGAGCCTGTTCAATCTAATAATGATAATGTTGCAAATCTGCCATCCAGACATCAGAATGATCCTCAATCTAGTGGAATAGAAAAGGATGTTCCAAATCCTGCTGTTGACCAGGGAGGCACTGAGTCTGTTCAAACTGGTGCTGCCAATCTCAGAAGTCCTTCTTTCAGTAATCAGAATAACGTTGCTCGTCCTAGCTTGGTTGAACGTAATAGTACTGCCCGTTCCTTCGAGTGGGAGGAATCGATCAATACATCACAAGAAGGAACAAAGAAAGATGCGGGCTGGCTTCACCTTCCTAGCCCAAAGAGGACTGCTGTATCTCCTTTGAAGAAGCATGAGGATACGAGATTTAGTAAGAGAAGAAAAGTTAAAAGATGGAGCTTATTGGAAGAAGACACCTTAAGGACTGGTGTACAGAAGTATGGAGAAGGAAGCTGGAGCCTTATCTTGAAAAGCTACTCTGATATATTCAAAGAGAGAACTCAGGTTGATCTGAAGGACAAGTGGAGAAATATGAAAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DAO Myb_DNA-binding

Protein Analysis

788

Amino Acids

85.79

Weight (kDa)

5.19

Isoelectric Point (pI)

41.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000851)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06910 AT1G15720 AT5G58340 AT5G58340
fragaria_vesca	FvH4_3g40451 FvH4_3g40451 FvH4_3g40451 FvH4_3g40451 FvH4_3g40451 FvH4_3g40451 FvH4_3g40451 FvH4_3g40451 FvH4_5g00450 FvH4_5g00450 FvH4_5g27240 FvH4_5g27240 FvH4_5g27240 FvH4_5g27240
malus_domestica	MD03G1052200.v1.1 MD10G1106900.v1.1 MD11G1054300.v1.1
prunus_persica	Prupe.6G041700_v2.0.a1
pyrus_communis	pycom03g04150 pycom11g04410
rosa_chinensis	RchiOBHm_Chr5g0000441 RchiOBHm_Chr5g0073101 RchiOBHm_Chr7g0218431 RchiOBHm_Chr7g0221531 RchiOBHm_Chr7g0221541
rosa_laevigata	RLG00000002155 RLG00000002374 RLG00000030867 RLG00000036363
rosa_multiflora	Rmu_co8212148.1_g000001 Rmu_co8273167.1_g000001 Rmu_sc0001680.1_g000002 Rmu_sc0003949.1_g000004 Rmu_sc0005592.1_g000024 Rmu_sc0005994.1_g000013 Rmu_sc0029255.1_g000001 Rmu_sc0029256.1_g000001 Rmu_ssc0000385.1_g000016
rosa_roxburghii	Rroxscaffold_1G00008100 Rroxscaffold_1G00008150 Rroxscaffold_1G00075720 Rroxscaffold_3G00240990 Rroxscaffold_5G00361570
rosa_rugosa	Rorug04G0383600.1 Rorug04G0383700 Rorug05G0421100 Rorug07G0177000
rosa_samantha	Rh5AG003600 Rh5AG478100 Rh5BG004800 Rh5BG498800 Rh5CG003900 Rh5CG522000 Rh5DG003700 Rh5DG510900 Rh7AG318400 Rh7BG310300 Rh7CG335200 Rh7CG335300 Rh7DG317400
rosa_wichuraiana	Rw5G000360 Rw5G044400 Rw7G027060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	11
AatII	GACGTC	1 cut(s)	15
AccB7I	CCANNNNNTGG	1 cut(s)	1202
AccBSI	CCGCTC	1 cut(s)	385
AccI	GTMKAC	2 cut(s)	15, 162
AccII	CGCG	3 cut(s)	25, 57, 700
AccIII	TCCGGA	1 cut(s)	141
AciI	CCGC	9 cut(s)	25, 55, 261, 305, 385, 413, 746, 883, 2117
AclI	AACGTT	1 cut(s)	2019
AclWI	GGATC	5 cut(s)	181, 357, 882, 1712, 1892
AcoI	YGGCCR	2 cut(s)	276, 1095
AcsI	RAATTY	1 cut(s)	665
AcuI	CTGAAG	4 cut(s)	948, 1620, 1674, 2354
AcyI	GRCGYC	1 cut(s)	12
AdeI	CACNNNGTG	1 cut(s)	285
AfaI	GTAC	8 cut(s)	135, 289, 723, 1215, 1228, 1407, 2053, 2253
AfiI	CCNNNNNNNGG	7 cut(s)	61, 351, 1066, 1202, 1309, 1354, 2070
AflII	CTTAAG	1 cut(s)	2239
AhdI	GACNNNNNGTC	1 cut(s)	808
AjnI	CCWGG	2 cut(s)	1432, 1947
Alw21I	GWGCWC	3 cut(s)	1331, 1669, 1701
Alw26I	GTCTC	4 cut(s)	181, 1164, 1442, 1493
AlwI	GGATC	5 cut(s)	181, 357, 882, 1712, 1892
Aor13HI	TCCGGA	1 cut(s)	141
AoxI	GGCC	4 cut(s)	276, 342, 902, 1095
ApaI	GGGCCC	1 cut(s)	906
ApeKI	GCWGC	3 cut(s)	1192, 1333, 1979
ApoI	RAATTY	1 cut(s)	665
ArsI	GACNNNNNNTTYG	4 cut(s)	159, 191, 464, 496
Asp700I	GAANNNNTTC	1 cut(s)	1996
AspLEI	GCGC	3 cut(s)	508, 700, 1192
AsuC2I	CCSGG	1 cut(s)	1349
AsuHPI	GGTGA	6 cut(s)	812, 946, 952, 1013, 1138, 2120
AsuII	TTCGAA	1 cut(s)	669
AvaII	GGWCC	8 cut(s)	4, 52, 106, 554, 707, 960, 1283, 1577
BaeGI	GKGCMC	2 cut(s)	594, 906
BaeI	ACNNNNGTAYC	4 cut(s)	1602, 1635, 2139, 2172
BalI	TGGCCA	1 cut(s)	278
BanII	GRGCYC	3 cut(s)	906, 1331, 1701
BauI	CACGAG	1 cut(s)	493
BbsI	GAAGAC	2 cut(s)	134, 2238
Bbv12I	GWGCWC	3 cut(s)	1331, 1669, 1701
BbvI	GCAGC	3 cut(s)	1204, 1320, 1966
BccI	CCATC	6 cut(s)	1148, 1214, 1619, 1828, 1888, 2208
BceAI	ACGGC	1 cut(s)	329
BcgI	CGANNNNNNTGC	6 cut(s)	84, 118, 1311, 1345, 1817, 1851
BciT130I	CCWGG	2 cut(s)	1434, 1949
BciVI	GTATCC	1 cut(s)	2173
BclI	TGATCA	2 cut(s)	619, 1423
BcnI	CCSGG	1 cut(s)	1349
BcoDI	GTCTC	4 cut(s)	181, 1164, 1442, 1493
BfaI	CTAG	7 cut(s)	324, 1467, 1542, 1761, 1908, 2031, 2136
BfrI	CTTAAG	1 cut(s)	2239
BfuI	GTATCC	1 cut(s)	2173
BglII	AGATCT	2 cut(s)	1757, 1775
BisI	GCNGC	4 cut(s)	261, 1193, 1334, 1980
BlpI	GCTNAGC	1 cut(s)	1839
BlsI	GCNGC	4 cut(s)	262, 1194, 1335, 1981
BmcAI	AGTACT	1 cut(s)	2053
Bme1390I	CCNGG	3 cut(s)	1349, 1434, 1949
Bme18I	GGWCC	8 cut(s)	4, 52, 106, 554, 707, 960, 1283, 1577
BmeRI	GACNNNNNGTC	1 cut(s)	808
BmrFI	CCNGG	3 cut(s)	1349, 1434, 1949
BmrI	ACTGGG	2 cut(s)	900, 1493
BmsI	GCATC	6 cut(s)	433, 493, 869, 1585, 1720, 2104
BmuI	ACTGGG	2 cut(s)	900, 1493
BpiI	GAAGAC	2 cut(s)	134, 2238
BpmI	CTGGAG	1 cut(s)	2296
Bpu1102I	GCTNAGC	1 cut(s)	1839
Bpu14I	TTCGAA	1 cut(s)	669
BpuMI	CCSGG	1 cut(s)	1349
Bsa29I	ATCGAT	1 cut(s)	2081
BsaAI	YACGTR	2 cut(s)	1217, 1789
BsaHI	GRCGYC	1 cut(s)	12
BsaI	GGTCTC	3 cut(s)	181, 1164, 1493
BsaJI	CCNNGG	4 cut(s)	345, 594, 1348, 1948
BsaWI	WCCGGW	1 cut(s)	141
Bsc4I	CCNNNNNNNGG	7 cut(s)	61, 351, 1066, 1202, 1309, 1354, 2070
Bse118I	RCCGGY	1 cut(s)	1097
Bse1I	ACTGG	9 cut(s)	400, 906, 997, 1060, 1196, 1488, 1686, 1978, 2251
Bse3DI	GCAATG	3 cut(s)	69, 624, 1776
BseAI	TCCGGA	1 cut(s)	141
BseBI	CCWGG	2 cut(s)	1434, 1949
BseCI	ATCGAT	1 cut(s)	2081
BseDI	CCNNGG	4 cut(s)	345, 594, 1348, 1948
BseGI	GGATG	3 cut(s)	1600, 1880, 1930
BseLI	CCNNNNNNNGG	7 cut(s)	61, 351, 1066, 1202, 1309, 1354, 2070
BseMI	GCAATG	3 cut(s)	69, 624, 1776
BseMII	CTCAG	7 cut(s)	273, 500, 1504, 1830, 1950, 2002, 2336
BseNI	ACTGG	9 cut(s)	400, 906, 997, 1060, 1196, 1488, 1686, 1978, 2251
BseRI	GAGGAG	6 cut(s)	74, 128, 409, 449, 1034, 1082
BseSI	GKGCMC	2 cut(s)	594, 906
BseXI	GCAGC	3 cut(s)	1204, 1320, 1966
BsgI	GTGCAG	1 cut(s)	1830
Bsh1236I	CGCG	3 cut(s)	25, 57, 700
Bsh1285I	CGRYCG	1 cut(s)	150
BshFI	GGCC	4 cut(s)	278, 344, 904, 1097
BshVI	ATCGAT	1 cut(s)	2081
BsiEI	CGRYCG	1 cut(s)	150
BsiHKAI	GWGCWC	3 cut(s)	1331, 1669, 1701
BsiSI	CCGG	3 cut(s)	142, 1098, 1348
BslFI	GGGAC	7 cut(s)	65, 899, 1003, 1051, 1099, 1219, 1286
BslI	CCNNNNNNNGG	7 cut(s)	61, 351, 1066, 1202, 1309, 1354, 2070
BsmAI	GTCTC	4 cut(s)	181, 1164, 1442, 1493
BsmFI	GGGAC	7 cut(s)	65, 899, 1003, 1051, 1099, 1219, 1286
BsnI	GGCC	4 cut(s)	278, 344, 904, 1097
Bso31I	GGTCTC	3 cut(s)	181, 1164, 1493
Bsp119I	TTCGAA	1 cut(s)	669
Bsp120I	GGGCCC	1 cut(s)	902
Bsp1286I	GDGCHC	5 cut(s)	594, 906, 1331, 1669, 1701
Bsp13I	TCCGGA	1 cut(s)	141
Bsp1407I	TGTACA	2 cut(s)	1226, 2251
Bsp1720I	GCTNAGC	1 cut(s)	1839
Bsp19I	CCATGG	1 cut(s)	594
BspACI	CCGC	9 cut(s)	25, 55, 261, 305, 385, 413, 746, 883, 2117
BspANI	GGCC	4 cut(s)	278, 344, 904, 1097
BspCNI	CTCAG	7 cut(s)	274, 501, 1503, 1831, 1951, 2001, 2335
BspDI	ATCGAT	1 cut(s)	2081
BspEI	TCCGGA	1 cut(s)	141
BspFNI	CGCG	3 cut(s)	25, 57, 700
BspPI	GGATC	5 cut(s)	181, 357, 882, 1712, 1892
BspT104I	TTCGAA	1 cut(s)	669
BspTI	CTTAAG	1 cut(s)	2239
BspTNI	GGTCTC	3 cut(s)	181, 1164, 1493
BsrBI	CCGCTC	1 cut(s)	385
BsrDI	GCAATG	3 cut(s)	69, 624, 1776
BsrFI	RCCGGY	1 cut(s)	1097
BsrGI	TGTACA	2 cut(s)	1226, 2251
BsrI	ACTGG	9 cut(s)	400, 906, 997, 1060, 1196, 1488, 1686, 1978, 2251
BssAI	RCCGGY	1 cut(s)	1097
BssECI	CCNNGG	4 cut(s)	345, 594, 1348, 1948
BssNI	GRCGYC	1 cut(s)	12
BssSI	CACGAG	1 cut(s)	493
BssT1I	CCWWGG	1 cut(s)	594
Bst2BI	CACGAG	1 cut(s)	493
Bst2UI	CCWGG	2 cut(s)	1434, 1949
Bst4CI	ACNGT	5 cut(s)	133, 292, 806, 1342, 1753
BstACI	GRCGYC	1 cut(s)	12
BstAFI	CTTAAG	1 cut(s)	2239
BstAUI	TGTACA	2 cut(s)	1226, 2251
BstBAI	YACGTR	2 cut(s)	1217, 1789
BstBI	TTCGAA	1 cut(s)	669
BstC8I	GCNNGC	5 cut(s)	1170, 1331, 1550, 2119, 2123
BstDSI	CCRYGG	2 cut(s)	345, 594
BstF5I	GGATG	3 cut(s)	1600, 1880, 1930
BstFNI	CGCG	3 cut(s)	25, 57, 700
BstHHI	GCGC	3 cut(s)	508, 700, 1192
BstMAI	GTCTC	4 cut(s)	181, 1164, 1442, 1493
BstMCI	CGRYCG	1 cut(s)	150
BstMWI	GCNNNNNNNGC	5 cut(s)	737, 779, 788, 839, 1673
BstNI	CCWGG	2 cut(s)	1434, 1949
BstNSI	RCATGY	1 cut(s)	1172
BstSCI	CCNGG	3 cut(s)	1347, 1432, 1947
BstSLI	GKGCMC	2 cut(s)	594, 906
BstUI	CGCG	3 cut(s)	25, 57, 700
BstV1I	GCAGC	3 cut(s)	1204, 1320, 1966
BstV2I	GAAGAC	2 cut(s)	134, 2238
BstX2I	RGATCY	3 cut(s)	1717, 1757, 1775
BstYI	RGATCY	3 cut(s)	1717, 1757, 1775
Bsu15I	ATCGAT	1 cut(s)	2081
BsuI	GTATCC	1 cut(s)	2173
BsuRI	GGCC	4 cut(s)	278, 344, 904, 1097
BsuTUI	ATCGAT	1 cut(s)	2081
BtgI	CCRYGG	2 cut(s)	345, 594
BtsCI	GGATG	3 cut(s)	1600, 1880, 1930
BtsI	GCAGTG	1 cut(s)	636
BtsIMutI	CAGTG	6 cut(s)	279, 636, 913, 1203, 1693, 1956
Cac8I	GCNNGC	5 cut(s)	1170, 1331, 1550, 2119, 2123
CfoI	GCGC	3 cut(s)	508, 700, 1192
Cfr10I	RCCGGY	1 cut(s)	1097
ClaI	ATCGAT	1 cut(s)	2081
CseI	GACGC	2 cut(s)	1554, 1575
Csp6I	GTAC	8 cut(s)	134, 288, 722, 1214, 1227, 1406, 2052, 2252
CviAII	CATG	4 cut(s)	253, 595, 1169, 2174
CviQI	GTAC	8 cut(s)	134, 288, 722, 1214, 1227, 1406, 2052, 2252
DraIII	CACNNNGTG	1 cut(s)	285
DrdI	GACNNNNNNGTC	1 cut(s)	11
DriI	GACNNNNNGTC	1 cut(s)	808
DseDI	GACNNNNNNGTC	1 cut(s)	11
EaeI	YGGCCR	2 cut(s)	276, 1095
Eam1105I	GACNNNNNGTC	1 cut(s)	808
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	2 cut(s)	1329, 1699
Eco130I	CCWWGG	1 cut(s)	594
Eco24I	GRGCYC	3 cut(s)	906, 1331, 1701
Eco31I	GGTCTC	3 cut(s)	181, 1164, 1493
Eco32I	GATATC	1 cut(s)	223
Eco47I	GGWCC	8 cut(s)	4, 52, 106, 554, 707, 960, 1283, 1577
Eco53kI	GAGCTC	2 cut(s)	1329, 1699
Eco57I	CTGAAG	4 cut(s)	948, 1620, 1674, 2354
EcoICRI	GAGCTC	2 cut(s)	1329, 1699
EcoO109I	RGGNCCY	3 cut(s)	554, 902, 1283
EcoRI	GAATTC	1 cut(s)	665
EcoRII	CCWGG	2 cut(s)	1432, 1947
EcoRV	GATATC	1 cut(s)	223
EcoT14I	CCWWGG	1 cut(s)	594
EcoT38I	GRGCYC	3 cut(s)	906, 1331, 1701
ErhI	CCWWGG	1 cut(s)	594
FaeI	CATG	4 cut(s)	256, 598, 1172, 2177
FalI	AAGNNNNNCTT	2 cut(s)	1984, 2016
FaqI	GGGAC	7 cut(s)	65, 899, 1003, 1051, 1099, 1219, 1286
FatI	CATG	4 cut(s)	252, 594, 1168, 2173
FauI	CCCGC	4 cut(s)	298, 739, 876, 2110
FauNDI	CATATG	1 cut(s)	1231
FbaI	TGATCA	2 cut(s)	619, 1423
FblI	GTMKAC	2 cut(s)	15, 162
Fnu4HI	GCNGC	4 cut(s)	261, 1193, 1334, 1980
FokI	GGATG	3 cut(s)	1607, 1867, 1937
FriOI	GRGCYC	3 cut(s)	906, 1331, 1701
Fsp4HI	GCNGC	4 cut(s)	261, 1193, 1334, 1980
FspBI	CTAG	7 cut(s)	324, 1467, 1542, 1761, 1908, 2031, 2136
GlaI	GCGC	3 cut(s)	507, 699, 1191
GluI	GCNGC	4 cut(s)	261, 1193, 1334, 1980
GsuI	CTGGAG	1 cut(s)	2296
HaeIII	GGCC	4 cut(s)	278, 344, 904, 1097
HapII	CCGG	3 cut(s)	142, 1098, 1348
HgaI	GACGC	2 cut(s)	1554, 1575
HhaI	GCGC	3 cut(s)	508, 700, 1192
Hin1I	GRCGYC	1 cut(s)	12
Hin1II	CATG	4 cut(s)	256, 598, 1172, 2177
Hin6I	GCGC	3 cut(s)	506, 698, 1190
HinP1I	GCGC	3 cut(s)	506, 698, 1190
HincII	GTYRAC	4 cut(s)	16, 1249, 1660, 1945
HindII	GTYRAC	4 cut(s)	16, 1249, 1660, 1945
HindIII	AAGCTT	2 cut(s)	168, 537
HinfI	GANTC	5 cut(s)	248, 1382, 1389, 1961, 2078
HpaI	GTTAAC	1 cut(s)	1660
HpaII	CCGG	3 cut(s)	142, 1098, 1348
HphI	GGTGA	6 cut(s)	812, 946, 952, 1013, 1138, 2120
Hpy166II	GTNNAC	9 cut(s)	16, 163, 288, 1227, 1249, 1408, 1660, 1945, 2252
Hpy188III	TCNNGA	7 cut(s)	50, 142, 1386, 1727, 1828, 1884, 2287
Hpy8I	GTNNAC	9 cut(s)	16, 163, 288, 1227, 1249, 1408, 1660, 1945, 2252
Hpy99I	CGWCG	2 cut(s)	17, 20
HpyCH4III	ACNGT	5 cut(s)	133, 292, 806, 1342, 1753
HpyCH4IV	ACGT	6 cut(s)	12, 18, 1216, 1788, 2019, 2044
HpyCH4V	TGCA	8 cut(s)	69, 629, 860, 976, 1172, 1298, 1811, 1871
HpyF10VI	GCNNNNNNNGC	5 cut(s)	737, 779, 788, 839, 1673
HpySE526I	ACGT	6 cut(s)	12, 18, 1216, 1788, 2019, 2044
Hsp92I	GRCGYC	1 cut(s)	12
Hsp92II	CATG	4 cut(s)	256, 598, 1172, 2177
HspAI	GCGC	3 cut(s)	506, 698, 1190
Kpn2I	TCCGGA	1 cut(s)	141
Ksp22I	TGATCA	2 cut(s)	619, 1423
KspAI	GTTAAC	1 cut(s)	1660
Lsp1109I	GCAGC	3 cut(s)	1204, 1320, 1966
LweI	GCATC	6 cut(s)	433, 493, 869, 1585, 1720, 2104
MaeI	CTAG	7 cut(s)	324, 1467, 1542, 1761, 1908, 2031, 2136
MaeII	ACGT	6 cut(s)	12, 18, 1216, 1788, 2019, 2044
MaeIII	GTNAC	6 cut(s)	800, 940, 1049, 1100, 1711, 1784
MbiI	CCGCTC	1 cut(s)	385
MboII	GAAGA	8 cut(s)	136, 139, 484, 1613, 2179, 2211, 2240, 2243
MflI	RGATCY	3 cut(s)	1717, 1757, 1775
MhlI	GDGCHC	5 cut(s)	594, 906, 1331, 1669, 1701
MlsI	TGGCCA	1 cut(s)	278
MluCI	AATT	8 cut(s)	665, 713, 815, 866, 1013, 1109, 1277, 1706
MluNI	TGGCCA	1 cut(s)	278
MlyI	GAGTC	1 cut(s)	1970
MmeI	TCCRAC	3 cut(s)	894, 1044, 1451
Mox20I	TGGCCA	1 cut(s)	278
MroI	TCCGGA	1 cut(s)	141
MroXI	GAANNNNTTC	1 cut(s)	1996
MscI	TGGCCA	1 cut(s)	278
MseI	TTAA	5 cut(s)	1032, 1659, 1680, 2208, 2240
MslI	CAYNNNNRTG	3 cut(s)	629, 1791, 1893
Msp20I	TGGCCA	1 cut(s)	278
MspCI	CTTAAG	1 cut(s)	2239
MspI	CCGG	3 cut(s)	142, 1098, 1348
MspR9I	CCNGG	3 cut(s)	1349, 1434, 1949
MvaI	CCWGG	2 cut(s)	1434, 1949
MvnI	CGCG	3 cut(s)	25, 57, 700
MwoI	GCNNNNNNNGC	5 cut(s)	737, 779, 788, 839, 1673
NciI	CCSGG	1 cut(s)	1349
NcoI	CCATGG	1 cut(s)	594
NdeI	CATATG	1 cut(s)	1231
NlaIII	CATG	4 cut(s)	256, 598, 1172, 2177
NmuCI	GTSAC	6 cut(s)	800, 940, 1049, 1100, 1711, 1784
NspI	RCATGY	1 cut(s)	1172
NspV	TTCGAA	1 cut(s)	669
PaeI	GCATGC	1 cut(s)	1172
PdmI	GAANNNNTTC	1 cut(s)	1996
PfeI	GAWTC	4 cut(s)	248, 1382, 1389, 2078
PflMI	CCANNNNNTGG	1 cut(s)	1202
PkrI	GCNGC	4 cut(s)	262, 1194, 1335, 1981
Ple19I	CGATCG	1 cut(s)	150
PleI	GAGTC	1 cut(s)	1969
PpsI	GAGTC	1 cut(s)	1969
Ppu21I	YACGTR	2 cut(s)	1217, 1789
PpuMI	RGGWCCY	2 cut(s)	554, 1283
Psp124BI	GAGCTC	2 cut(s)	1331, 1701
Psp1406I	AACGTT	1 cut(s)	2019
Psp5II	RGGWCCY	2 cut(s)	554, 1283
Psp6I	CCWGG	2 cut(s)	1432, 1947
PspGI	CCWGG	2 cut(s)	1432, 1947
PspOMI	GGGCCC	1 cut(s)	902
PspPPI	RGGWCCY	2 cut(s)	554, 1283
PsrI	GAACNNNNNNTAC	2 cut(s)	2044, 2076
PsuI	RGATCY	3 cut(s)	1717, 1757, 1775
PvuI	CGATCG	1 cut(s)	150
RsaI	GTAC	8 cut(s)	135, 289, 723, 1215, 1228, 1407, 2053, 2253
RsaNI	GTAC	8 cut(s)	134, 288, 722, 1214, 1227, 1406, 2052, 2252
RseI	CAYNNNNRTG	3 cut(s)	629, 1791, 1893
SacI	GAGCTC	2 cut(s)	1331, 1701
SalI	GTCGAC	1 cut(s)	14
SaqAI	TTAA	5 cut(s)	1032, 1659, 1680, 2208, 2240
SatI	GCNGC	4 cut(s)	261, 1193, 1334, 1980
ScaI	AGTACT	1 cut(s)	2053
SchI	GAGTC	1 cut(s)	1970
ScrFI	CCNGG	3 cut(s)	1349, 1434, 1949
SduI	GDGCHC	5 cut(s)	594, 906, 1331, 1669, 1701
SfaNI	GCATC	6 cut(s)	433, 493, 869, 1585, 1720, 2104
SfuI	TTCGAA	1 cut(s)	669
SgrDI	CGTCGACG	1 cut(s)	14
SinI	GGWCC	8 cut(s)	4, 52, 106, 554, 707, 960, 1283, 1577
SmiMI	CAYNNNNRTG	3 cut(s)	629, 1791, 1893
SmlI	CTYRAG	1 cut(s)	2239
SmoI	CTYRAG	1 cut(s)	2239
SphI	GCATGC	1 cut(s)	1172
Sse9I	AATT	8 cut(s)	665, 713, 815, 866, 1013, 1109, 1277, 1706
SsiI	CCGC	9 cut(s)	25, 55, 261, 305, 385, 413, 746, 883, 2117
SspMI	CTAG	7 cut(s)	324, 1467, 1542, 1761, 1908, 2031, 2136
SstI	GAGCTC	2 cut(s)	1331, 1701
StyD4I	CCNGG	3 cut(s)	1347, 1432, 1947
StyI	CCWWGG	1 cut(s)	594
TaaI	ACNGT	5 cut(s)	133, 292, 806, 1342, 1753
TaiI	ACGT	6 cut(s)	15, 21, 1219, 1791, 2022, 2047
TaqII	GACCGA	3 cut(s)	163, 948, 1594
TasI	AATT	8 cut(s)	665, 713, 815, 866, 1013, 1109, 1277, 1706
TatI	WGTACW	4 cut(s)	1226, 1405, 2051, 2251
TauI	GCSGC	1 cut(s)	263
TfiI	GAWTC	4 cut(s)	248, 1382, 1389, 2078
Tru1I	TTAA	5 cut(s)	1032, 1659, 1680, 2208, 2240
Tru9I	TTAA	5 cut(s)	1032, 1659, 1680, 2208, 2240
TscAI	CASTG	6 cut(s)	286, 636, 913, 1203, 1693, 1963
TseFI	GTSAC	6 cut(s)	800, 940, 1049, 1100, 1711, 1784
TseI	GCWGC	3 cut(s)	1192, 1333, 1979
Tsp45I	GTSAC	6 cut(s)	800, 940, 1049, 1100, 1711, 1784
TspDTI	ATGAA	2 cut(s)	269, 503
TspGWI	ACGGA	2 cut(s)	260, 549
TspRI	CASTG	6 cut(s)	286, 636, 913, 1203, 1693, 1963
Van91I	CCANNNNNTGG	1 cut(s)	1202
Vha464I	CTTAAG	1 cut(s)	2239
VpaK11BI	GGWCC	8 cut(s)	4, 52, 106, 554, 707, 960, 1283, 1577
XapI	RAATTY	1 cut(s)	665
XceI	RCATGY	1 cut(s)	1172
XmiI	GTMKAC	2 cut(s)	15, 162
XmnI	GAANNNNTTC	1 cut(s)	1996
XspI	CTAG	7 cut(s)	324, 1467, 1542, 1761, 1908, 2031, 2136
ZraI	GACGTC	1 cut(s)	13
ZrmI	AGTACT	1 cut(s)	2053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.