RchiOBHm_Chr5g0073101
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000851
Physical Location & Seq
Forward (+)
79173057 .. 79176927
3871 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34801

Sequence Viewer

Length: 1962 bp
ATGGACTTAGACGTCGACGTTTCGCGGTGGGTCCTCGAGCTCCTCCTCCGCGACCGCGACAAGGAGAGCGTCGCCAAGCGAGTACTCGCCGCCGTGCCGCTCTCGAACCAGGACTGGCGGTTGAAGAAGACCGTCCTTCTCCGAACGATCGAGTCCGAAGTCTTGGACGAGGCTTCGGTCACCGAAGCTATACTAGAGTCCTTGGAGTCGATCGAGGCTTTGGACCGCGGCCAAGGGATTCCGGTCACGGACTCCATGAGAGCGGCGTACTGCGCCGTGGCGACGGAGTGCACGGTGAAGTTTTTGGTTTGCTTTGGAGGGAAGCCGAGCGGGAAGTACATGGAGGCGGTTGATCGGATTTGGAGAGGTAGGGTTAGGGTTTTGGAGGAGTCTGAGGGTTGCGAGCTGGTCTCGGGTGAGTTGAGGGAGAGAAGAGATGAGGTGGAGGCTGGGATTTGGGATGTGAAGGTTTCGAAGAAGCTGGCGAGCATGAATAGTAGAAATGATGCGTTGAGATTGGTTGCGGCGTATGTGAAGGAAGCATTGGCGATGCTGGGTCCTCCGTTTATTGCTTGGGCTGTTAGGTTTAATATGCAGAAGGGAAGTTTAGGGATGGAAGGTGATGAGGTTGCAGTGGAGAATGATGGTAATGTGGGTGATGGGTGTGAAGTGCAGGTTCGAATGGCGAATGGGGCTGAATTGGAGGTGCAAACGGCAAATGGGGCTGATTTGGAGGTGCAAAGGGCGAATGGGGTTGAGTTGGGTGATGGCTCCAAATTGGAGGTGAGTGGGGCTAATGTGCGTGATGCATCTGAATTGGAAGCGCAGAGAGGGGCAAATGTCAATTCTGGGTCTGAACAGGCGCAAAGGGCGAATGGGGTTACTGTTAATTCTGGGTCTGAACAAGAGGCACAAAGGGCTAATGTCAATTCTGGGTCTGAATTGGAGGCACAAAGGGTGAATGGGGCAAATGATGTTAGTGATAGGTCTGAACAGGAGGCACAAAGGCCGAATGGGGCTAATGTTAGTGATGCCTCTGAACAGGAGGCACATGATACTAATGTTGTGGGGGTGGGGAGATCACAACGTAATGGACATCGTGGTGTCCTCAGCTTAGAACCTGCAACTAAAGAAAAAGAAACTCCAAGGAGCAGGGCACTTAGACGCAGGCATGGACCGGTTAAGATTAGAGATGCTGAAGATGTGGGTATGGAAGCATCAGCTGGCATATATAACTCAGTGTCTAGTGCTGAAGTTAGAAAAGTGCAAGAAGAACTTAAGTCCAGTGTTTTGGCTCTACAAGCTGTAGTGACAGACCCACTTCCCTATGCTTTGCGAGTGTCGGAAATTGTAAGATCTGAGTTGGGAATGAAACCTGTGGATCATGTAAGTGAAGAAAATGGAGGTGCAGCAAATCCATCTGTGGAAAGGAACTCTGAGCCTGATCAATCTAATAATGATAATCATGGAAACCAGACCAGTCATCAGAATGATGTTCCCCAACCTAGTGAAAAAGAAAATGATGGACCAAATCTGTCTGTTGACAGGGGAAAGGGCATGGAGTATGTTGGAACGGGTGATGTCAATCCTGGAAATCCATCTTGCAGTTATCAGAATAATATTTCCCGAGCTGGCTTGATGGAACGCAATAGCACTGCCCATACTTATGAGTGGGAAGACTCACTAGGTATGTCACCTGAACGAACAAATAGTAAGGGGAGGCTTCACCTACCTAGTCCAAAAAGGAATGCTGTTTCTCCACTGAAGAAGTATGAGGATAAAAGATTTTCTAAGAGGAGAAAAGTTAAGAGATGGAGCTTACATGAAGAAGATACGTTAAGGACTGGTGTGCAGAAGTATGGCAGAGGCAATTGGAAGTTGATCTTAGATGCATACCGAGATGTATTTGTAGAGAGAACTGAGGTTGATCTAAAGGACAAGTGGAGAAATATGACGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAO Myb_DNA-binding

Protein Analysis

653

Amino Acids

71.86

Weight (kDa)

5.33

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 603 - 651 1.5e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 11
AatII GACGTC 1 cut(s) 15
Acc36I ACCTGC 2 cut(s) 664, 1129
AccBSI CCGCTC 3 cut(s) 100, 263, 330
AccI GTMKAC 1 cut(s) 15
AccII CGCG 4 cut(s) 25, 51, 57, 228
AclWI GGATC 1 cut(s) 1389
AcoI YGGCCR 1 cut(s) 229
AcuI CTGAAG 3 cut(s) 1218, 1272, 1784
AcyI GRCGYC 1 cut(s) 12
AfaI GTAC 3 cut(s) 84, 269, 338
AfiI CCNNNNNNNGG 1 cut(s) 61
AflII CTTAAG 1 cut(s) 1277
AgeI ACCGGT 1 cut(s) 1177
AgsI TTSAA 1 cut(s) 124
AjnI CCWGG 2 cut(s) 108, 1588
AjuI GAANNNNNNNTTGG 2 cut(s) 527, 559
AluBI AGCT 9 cut(s) 40, 188, 406, 481, 1113, 1223, 1304, 1631, 1818
AluI AGCT 9 cut(s) 40, 188, 406, 481, 1113, 1223, 1304, 1631, 1818
Alw21I GWGCWC 2 cut(s) 42, 293
Alw26I GTCTC 1 cut(s) 415
Alw44I GTGCAC 1 cut(s) 289
AlwI GGATC 1 cut(s) 1389
Ama87I CYCGRG 3 cut(s) 35, 412, 1626
AoxI GGCC 2 cut(s) 229, 1007
ApaLI GTGCAC 1 cut(s) 289
ApeKI GCWGC 1 cut(s) 1409
AsiGI ACCGGT 1 cut(s) 1177
AspLEI GCGC 3 cut(s) 275, 826, 865
AspS9I GGNCC 5 cut(s) 31, 223, 557, 1175, 1526
AsuII TTCGAA 2 cut(s) 473, 679
AvaI CYCGRG 3 cut(s) 35, 412, 1626
AvaII GGWCC 5 cut(s) 31, 223, 557, 1175, 1526
BaeGI GKGCMC 2 cut(s) 293, 1159
BaeI ACNNNNGTAYC 2 cut(s) 1047, 1080
BanII GRGCYC 1 cut(s) 42
BbsI GAAGAC 2 cut(s) 134, 1683
Bbv12I GWGCWC 2 cut(s) 42, 293
BbvCI CCTCAGC 1 cut(s) 1109
BbvI GCAGC 1 cut(s) 1421
BccI CCATC 9 cut(s) 607, 638, 653, 761, 1426, 1517, 1606, 1633, 1806
BceAI ACGGC 3 cut(s) 77, 260, 729
BciT130I CCWGG 2 cut(s) 110, 1590
BclI TGATCA 1 cut(s) 1444
BcoDI GTCTC 1 cut(s) 415
BfaI CTAG 5 cut(s) 194, 1245, 1506, 1685, 1734
BfmI CTRYAG 1 cut(s) 1305
BfrI CTTAAG 1 cut(s) 1277
BfuAI ACCTGC 2 cut(s) 664, 1129
BglII AGATCT 1 cut(s) 1355
BisI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1410
BlsI GCNGC 6 cut(s) 91, 99, 230, 265, 526, 1411
BmcAI AGTACT 1 cut(s) 84
Bme1390I CCNGG 2 cut(s) 110, 1590
Bme18I GGWCC 5 cut(s) 31, 223, 557, 1175, 1526
BmeT110I CYCGRG 3 cut(s) 35, 412, 1626
BmgT120I GGNCC 5 cut(s) 31, 223, 557, 1175, 1526
BmiI GGNNCC 3 cut(s) 32, 558, 772
BmrFI CCNGG 2 cut(s) 110, 1590
BmsI GCATC 8 cut(s) 496, 540, 796, 818, 1021, 1183, 1226, 1879
BpiI GAAGAC 2 cut(s) 134, 1683
BplI GAGNNNNNCTC 2 cut(s) 395, 427
Bpu10I CCTNAGC 1 cut(s) 1109
Bpu14I TTCGAA 2 cut(s) 473, 679
BsaBI GATNNNNATC 1 cut(s) 1584
BsaHI GRCGYC 1 cut(s) 12
BsaI GGTCTC 1 cut(s) 415
BsaJI CCNNGG 5 cut(s) 201, 226, 232, 276, 1145
BsaWI WCCGGW 2 cut(s) 241, 1177
Bsc4I CCNNNNNNNGG 1 cut(s) 61
Bse118I RCCGGY 1 cut(s) 1177
Bse1I ACTGG 4 cut(s) 119, 1284, 1479, 1849
Bse8I GATNNNNATC 1 cut(s) 1584
BseBI CCWGG 2 cut(s) 110, 1590
BseDI CCNNGG 5 cut(s) 201, 226, 232, 276, 1145
BseGI GGATG 2 cut(s) 466, 618
BseJI GATNNNNATC 1 cut(s) 1584
BseLI CCNNNNNNNGG 1 cut(s) 61
BseMII CTCAG 6 cut(s) 384, 1123, 1251, 1350, 1428, 1911
BseNI ACTGG 4 cut(s) 119, 1284, 1479, 1849
BseRI GAGGAG 4 cut(s) 32, 35, 401, 1810
BseSI GKGCMC 2 cut(s) 293, 1159
BseXI GCAGC 1 cut(s) 1421
BseYI CCCAGC 2 cut(s) 449, 553
BsgI GTGCAG 3 cut(s) 692, 1428, 1871
Bsh1236I CGCG 4 cut(s) 25, 51, 57, 228
Bsh1285I CGRYCG 3 cut(s) 55, 150, 213
BshFI GGCC 2 cut(s) 231, 1009
BshTI ACCGGT 1 cut(s) 1177
BsiEI CGRYCG 3 cut(s) 55, 150, 213
BsiHKAI GWGCWC 2 cut(s) 42, 293
BsiHKCI CYCGRG 3 cut(s) 35, 412, 1626
BsiSI CCGG 2 cut(s) 242, 1178
BslI CCNNNNNNNGG 1 cut(s) 61
BsmAI GTCTC 1 cut(s) 415
BsmI GAATGC 1 cut(s) 1753
BsnI GGCC 2 cut(s) 231, 1009
Bso31I GGTCTC 1 cut(s) 415
BsoBI CYCGRG 3 cut(s) 35, 412, 1626
Bsp119I TTCGAA 2 cut(s) 473, 679
Bsp1286I GDGCHC 3 cut(s) 42, 293, 1159
Bsp143I GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
BspANI GGCC 2 cut(s) 231, 1009
BspCNI CTCAG 6 cut(s) 385, 1122, 1250, 1351, 1429, 1912
BspFNI CGCG 4 cut(s) 25, 51, 57, 228
BspLI GGNNCC 3 cut(s) 32, 558, 772
BspMI ACCTGC 2 cut(s) 664, 1129
BspPI GGATC 1 cut(s) 1389
BspT104I TTCGAA 2 cut(s) 473, 679
BspTI CTTAAG 1 cut(s) 1277
BspTNI GGTCTC 1 cut(s) 415
BsrBI CCGCTC 3 cut(s) 100, 263, 330
BsrFI RCCGGY 1 cut(s) 1177
BsrI ACTGG 4 cut(s) 119, 1284, 1479, 1849
BssAI RCCGGY 1 cut(s) 1177
BssECI CCNNGG 5 cut(s) 201, 226, 232, 276, 1145
BssMI GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
BssNI GRCGYC 1 cut(s) 12
BssT1I CCWWGG 3 cut(s) 201, 232, 1145
Bst2UI CCWGG 2 cut(s) 110, 1590
Bst4CI ACNGT 3 cut(s) 133, 295, 886
Bst6I CTCTTC 1 cut(s) 427
BstACI GRCGYC 1 cut(s) 12
BstAFI CTTAAG 1 cut(s) 1277
BstBI TTCGAA 2 cut(s) 473, 679
BstC8I GCNNGC 6 cut(s) 404, 483, 487, 1169, 1225, 1633
BstDSI CCRYGG 2 cut(s) 226, 276
BstEII GGTNACC 1 cut(s) 178
BstF5I GGATG 2 cut(s) 466, 618
BstFNI CGCG 4 cut(s) 25, 51, 57, 228
BstHHI GCGC 3 cut(s) 275, 826, 865
BstKTI GATC 9 cut(s) 150, 213, 355, 1082, 1358, 1384, 1447, 1884, 1930
BstMAI GTCTC 1 cut(s) 415
BstMBI GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
BstMCI CGRYCG 3 cut(s) 55, 150, 213
BstMWI GCNNNNNNNGC 6 cut(s) 272, 692, 722, 869, 917, 1301
BstNI CCWGG 2 cut(s) 110, 1590
BstPI GGTNACC 1 cut(s) 178
BstSCI CCNGG 2 cut(s) 108, 1588
BstSFI CTRYAG 1 cut(s) 1305
BstSLI GKGCMC 2 cut(s) 293, 1159
BstUI CGCG 4 cut(s) 25, 51, 57, 228
BstV1I GCAGC 1 cut(s) 1421
BstV2I GAAGAC 2 cut(s) 134, 1683
BstX2I RGATCY 1 cut(s) 1355
BstXI CCANNNNNNTGG 1 cut(s) 1291
BstYI RGATCY 1 cut(s) 1355
BsuRI GGCC 2 cut(s) 231, 1009
BtgI CCRYGG 2 cut(s) 226, 276
BtgZI GCGATG 1 cut(s) 563
BtsCI GGATG 2 cut(s) 466, 618
BtsI GCAGTG 2 cut(s) 639, 1653
BtsIMutI CAGTG 5 cut(s) 639, 1245, 1291, 1653, 1760
BveI ACCTGC 2 cut(s) 664, 1129
Cac8I GCNNGC 6 cut(s) 404, 483, 487, 1169, 1225, 1633
CfoI GCGC 3 cut(s) 275, 826, 865
Cfr10I RCCGGY 1 cut(s) 1177
Cfr13I GGNCC 5 cut(s) 31, 223, 557, 1175, 1526
Cfr42I CCGCGG 1 cut(s) 229
CseI GACGC 2 cut(s) 58, 1173
Csp6I GTAC 3 cut(s) 83, 268, 337
CspAI ACCGGT 1 cut(s) 1177
CviAII CATG 9 cut(s) 256, 340, 490, 1052, 1172, 1385, 1466, 1558, 1823
CviQI GTAC 3 cut(s) 83, 268, 337
DpnI GATC 9 cut(s) 149, 212, 354, 1081, 1357, 1383, 1446, 1883, 1929
DpnII GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
DrdI GACNNNNNNGTC 1 cut(s) 11
DseDI GACNNNNNNGTC 1 cut(s) 11
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 427
EarI CTCTTC 1 cut(s) 427
Ecl136II GAGCTC 1 cut(s) 40
Eco130I CCWWGG 3 cut(s) 201, 232, 1145
Eco24I GRGCYC 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 415
Eco47I GGWCC 5 cut(s) 31, 223, 557, 1175, 1526
Eco53kI GAGCTC 1 cut(s) 40
Eco57I CTGAAG 3 cut(s) 1218, 1272, 1784
Eco88I CYCGRG 3 cut(s) 35, 412, 1626
Eco91I GGTNACC 1 cut(s) 178
EcoICRI GAGCTC 1 cut(s) 40
EcoO109I RGGNCCY 2 cut(s) 31, 557
EcoO65I GGTNACC 1 cut(s) 178
EcoRII CCWGG 2 cut(s) 108, 1588
EcoT14I CCWWGG 3 cut(s) 201, 232, 1145
EcoT22I ATGCAT 2 cut(s) 811, 1894
EcoT38I GRGCYC 1 cut(s) 42
ErhI CCWWGG 3 cut(s) 201, 232, 1145
FaeI CATG 9 cut(s) 259, 343, 493, 1055, 1175, 1388, 1469, 1561, 1826
FalI AAGNNNNNCTT 4 cut(s) 1260, 1292, 1868, 1900
FatI CATG 9 cut(s) 255, 339, 489, 1051, 1171, 1384, 1465, 1557, 1822
FauI CCCGC 1 cut(s) 323
FbaI TGATCA 1 cut(s) 1444
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1410
FokI GGATG 2 cut(s) 473, 625
FriOI GRGCYC 1 cut(s) 42
Fsp4HI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1410
FspBI CTAG 5 cut(s) 194, 1245, 1506, 1685, 1734
GlaI GCGC 3 cut(s) 274, 825, 864
GluI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1410
GsaI CCCAGC 2 cut(s) 453, 557
HaeIII GGCC 2 cut(s) 231, 1009
HapII CCGG 2 cut(s) 242, 1178
HgaI GACGC 2 cut(s) 58, 1173
HhaI GCGC 3 cut(s) 275, 826, 865
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 9 cut(s) 259, 343, 493, 1055, 1175, 1388, 1469, 1561, 1826
Hin6I GCGC 3 cut(s) 273, 824, 863
HinP1I GCGC 3 cut(s) 273, 824, 863
HincII GTYRAC 2 cut(s) 16, 1543
HindII GTYRAC 2 cut(s) 16, 1543
HinfI GANTC 7 cut(s) 152, 197, 206, 238, 251, 389, 1679
HpaII CCGG 2 cut(s) 242, 1178
Hpy166II GTNNAC 3 cut(s) 16, 291, 1543
Hpy188III TCNNGA 2 cut(s) 103, 1626
Hpy8I GTNNAC 3 cut(s) 16, 291, 1543
Hpy99I CGWCG 4 cut(s) 17, 20, 74, 286
HpyAV CCTTC 5 cut(s) 146, 460, 529, 592, 611
HpyCH4III ACNGT 3 cut(s) 133, 295, 886
HpyCH4IV ACGT 4 cut(s) 12, 18, 1087, 1835
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 692, 722, 869, 917, 1301
HpySE526I ACGT 4 cut(s) 12, 18, 1087, 1835
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 9 cut(s) 259, 343, 493, 1055, 1175, 1388, 1469, 1561, 1826
HspAI GCGC 3 cut(s) 273, 824, 863
Ksp22I TGATCA 1 cut(s) 1444
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
LmnI GCTCC 4 cut(s) 45, 776, 1149, 1815
Lsp1109I GCAGC 1 cut(s) 1421
LweI GCATC 8 cut(s) 496, 540, 796, 818, 1021, 1183, 1226, 1879
MaeI CTAG 5 cut(s) 194, 1245, 1506, 1685, 1734
MaeII ACGT 4 cut(s) 12, 18, 1087, 1835
MaeIII GTNAC 5 cut(s) 178, 244, 880, 1309, 1692
MalI GATC 9 cut(s) 149, 212, 354, 1081, 1357, 1383, 1446, 1883, 1929
MbiI CCGCTC 3 cut(s) 100, 263, 330
MboI GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
MfeI CAATTG 1 cut(s) 1870
MflI RGATCY 1 cut(s) 1355
MhlI GDGCHC 3 cut(s) 42, 293, 1159
MluCI AATT 9 cut(s) 698, 776, 815, 844, 889, 928, 941, 1347, 1870
MlyI GAGTC 6 cut(s) 161, 206, 215, 245, 398, 1673
MmeI TCCRAC 2 cut(s) 1323, 1549
Mph1103I ATGCAT 2 cut(s) 811, 1894
MseI TTAA 6 cut(s) 588, 888, 1182, 1278, 1806, 1838
MslI CAYNNNNRTG 4 cut(s) 1101, 1389, 1488, 1665
MspA1I CMGCKG 2 cut(s) 228, 1223
MspCI CTTAAG 1 cut(s) 1277
MspI CCGG 2 cut(s) 242, 1178
MspR9I CCNGG 2 cut(s) 110, 1590
MunI CAATTG 1 cut(s) 1870
Mva1269I GAATGC 1 cut(s) 1753
MvaI CCWGG 2 cut(s) 110, 1590
MvnI CGCG 4 cut(s) 25, 51, 57, 228
MwoI GCNNNNNNNGC 6 cut(s) 272, 692, 722, 869, 917, 1301
NdeII GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
NlaIII CATG 9 cut(s) 259, 343, 493, 1055, 1175, 1388, 1469, 1561, 1826
NlaIV GGNNCC 3 cut(s) 32, 558, 772
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 4 cut(s) 178, 244, 1309, 1692
NsiI ATGCAT 2 cut(s) 811, 1894
NspV TTCGAA 2 cut(s) 473, 679
PaeR7I CTCGAG 1 cut(s) 35
PctI GAATGC 1 cut(s) 1753
PfeI GAWTC 1 cut(s) 238
PfoI TCCNGGA 1 cut(s) 1588
PinAI ACCGGT 1 cut(s) 1177
PkrI GCNGC 6 cut(s) 91, 99, 230, 265, 526, 1411
Ple19I CGATCG 2 cut(s) 150, 213
PleI GAGTC 6 cut(s) 160, 205, 214, 245, 397, 1673
PpsI GAGTC 6 cut(s) 160, 205, 214, 245, 397, 1673
PpuMI RGGWCCY 2 cut(s) 31, 557
Psp124BI GAGCTC 1 cut(s) 42
Psp5II RGGWCCY 2 cut(s) 31, 557
Psp6I CCWGG 2 cut(s) 108, 1588
PspEI GGTNACC 1 cut(s) 178
PspFI CCCAGC 2 cut(s) 449, 553
PspGI CCWGG 2 cut(s) 108, 1588
PspN4I GGNNCC 3 cut(s) 32, 558, 772
PspPI GGNCC 5 cut(s) 31, 223, 557, 1175, 1526
PspPPI RGGWCCY 2 cut(s) 31, 557
PspXI VCTCGAGB 1 cut(s) 35
PsuI RGATCY 1 cut(s) 1355
PvuI CGATCG 2 cut(s) 150, 213
PvuII CAGCTG 1 cut(s) 1223
RsaI GTAC 3 cut(s) 84, 269, 338
RsaNI GTAC 3 cut(s) 83, 268, 337
RseI CAYNNNNRTG 4 cut(s) 1101, 1389, 1488, 1665
SacI GAGCTC 1 cut(s) 42
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 6 cut(s) 588, 888, 1182, 1278, 1806, 1838
SatI GCNGC 6 cut(s) 90, 98, 229, 264, 525, 1410
Sau3AI GATC 9 cut(s) 147, 210, 352, 1079, 1355, 1381, 1444, 1881, 1927
Sau96I GGNCC 5 cut(s) 31, 223, 557, 1175, 1526
ScaI AGTACT 1 cut(s) 84
SchI GAGTC 6 cut(s) 161, 206, 215, 245, 398, 1673
ScrFI CCNGG 2 cut(s) 110, 1590
SduI GDGCHC 3 cut(s) 42, 293, 1159
SfaNI GCATC 8 cut(s) 496, 540, 796, 818, 1021, 1183, 1226, 1879
SfcI CTRYAG 1 cut(s) 1305
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 229
SfuI TTCGAA 2 cut(s) 473, 679
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 5 cut(s) 31, 223, 557, 1175, 1526
SlaI CTCGAG 1 cut(s) 35
SmiMI CAYNNNNRTG 4 cut(s) 1101, 1389, 1488, 1665
SmlI CTYRAG 2 cut(s) 35, 1277
SmoI CTYRAG 2 cut(s) 35, 1277
Sse9I AATT 9 cut(s) 698, 776, 815, 844, 889, 928, 941, 1347, 1870
SspI AATATT 1 cut(s) 1621
SspMI CTAG 5 cut(s) 194, 1245, 1506, 1685, 1734
SstI GAGCTC 1 cut(s) 42
StyD4I CCNGG 2 cut(s) 108, 1588
StyI CCWWGG 3 cut(s) 201, 232, 1145
TaaI ACNGT 3 cut(s) 133, 295, 886
TaiI ACGT 4 cut(s) 15, 21, 1090, 1838
TaqI TCGA 8 cut(s) 15, 36, 104, 150, 209, 213, 473, 679
TaqII GACCGA 1 cut(s) 166
TasI AATT 9 cut(s) 698, 776, 815, 844, 889, 928, 941, 1347, 1870
TatI WGTACW 2 cut(s) 82, 336
TauI GCSGC 5 cut(s) 92, 100, 231, 266, 527
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 6 cut(s) 588, 888, 1182, 1278, 1806, 1838
Tru9I TTAA 6 cut(s) 588, 888, 1182, 1278, 1806, 1838
TscAI CASTG 5 cut(s) 639, 1245, 1291, 1660, 1767
TseFI GTSAC 4 cut(s) 178, 244, 1309, 1692
TseI GCWGC 1 cut(s) 1409
Tsp45I GTSAC 4 cut(s) 178, 244, 1309, 1692
TspDTI ATGAA 3 cut(s) 506, 1385, 1839
TspGWI ACGGA 3 cut(s) 263, 299, 552
TspRI CASTG 5 cut(s) 639, 1245, 1291, 1660, 1767
Vha464I CTTAAG 1 cut(s) 1277
VneI GTGCAC 1 cut(s) 289
VpaK11BI GGWCC 5 cut(s) 31, 223, 557, 1175, 1526
XhoI CTCGAG 1 cut(s) 35
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 5 cut(s) 194, 1245, 1506, 1685, 1734
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 1 cut(s) 84
Zsp2I ATGCAT 2 cut(s) 811, 1894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.