Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002557

Physical Location & Seq

Genomic Coordinates Reverse (-)

31546339 .. 31551150

Gene Structure 4812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1187300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGTGCTATGTGTACAAGTTAGTTAGAAAGGTTATTAGCTGTTGTTGCTGTTATGACTATAAATACCATACTGATGTAATTATTTTTCAGATAAGTAATGAAATTGTAATATTTCAGAAACACATTTTCTTCTCAGTTTCTTTATGGTTTCATCGCCAACAGCCTCACGGCCTCTCTCGATCCTCTTCTCTTCCGCTCTACTTCTTTGATCTCTACCCAAATTCAATCGAATTCCTTGCTGATTTTGTACTCCGATCTTCGATCTCGATCTGTTTTCTTGATCTTCAATGGCGTATCCGTCTGCGACTGCTTCTCTTTTTGAGTCGGTTTCAATTCCAAATCCTTCTTCAAACCCTAATTCCTCTCCTTATACCTCTCTCACGATCCAAAACATTGGCAGCATGGTGCCAATCAAGCTCAAGCGGTCCAATTATCTCTCATGGTGCTCTCTGTTTGCCCCAATTCTTAGGCACTATCGGCTTCTTGGATCGTTCTACGGGGAAGACGCTTTTGCGGGGTTCAGTTAAAAAAGGTTTTTATCCTCTGCAGTCCTCTACATCTAATCGTTCTTTCTCTGGTAATGTTCCTCCTTCACTCACTGCATCAGCTTTCGTCAATATTAAAGCTCTAGTCAAGATATGGCATAGTCGTTTGGGCCATCCTTTCGTCAGTAATGTTCCTCCTATTTTTTGCAAGGTTCTCTCTAAGAATAAACTTGTTGTGCAAGGTGCATCTTCAGTTGAATTCTTCTGCTCTGATTGTGCTATAGCTAAAAACCATAAGCTTCCTTTCAAAGCTGCAAGTTCTTCTGCATCCCATAGCTTGGCATTACTTCACTGTGATGTTTGGGGACCTGCTTCTGTCATTTCAGTTAGTGGTTTTCGCTATTATTTGTTGATAGTAGATGATCATACTAAGTATACCTGGTTTTTTCCATTGAAAGAAAAATCTGAGGTGTATTCTACATTTGTAACCTTTAAAACATATGTAGAAAATATTGTTGGGAATAAAATCAAGGCTATTCGTTTAGATTCAGAGGGTGAATTTGTCAGTTCTTCTTTTCAAGCTTTTCTTCAATTACATGGCATTTCTCATCAACTTAGTTGCCCACATACTCCTGAGCAAAATGGTTGTGTAGAAAGGAAACACCGACATCTTGTAGAGACAGCTCGCACTTTCTTAGTTGCATCTCATGTTCCTCACAAATATTGGGTTGAGGCTATATCTACTACCCTCTATTTGATTAATCAATTACCTATATCTGGTCTTCTTTGTTCTCCATGGGAATTGTTATTTCATACTTCACCAGATTATACTAGATTTAAGATCTTTGGCTGCAGCTGCTACCCTTGGTTAAAGCCCTATGTCTCTTTTAAGTTGGATGTCAAGGACTTAGGTACCCTTCACTATTTTCTGGGGTTGGAAGTTCACAGATCATCCAAAGGTTTATTTCTTCATCAAAGCAAATATCTTCTGGATTTACTTCAGAAAACAAAAATGGAAGGTGCCAAGCCATGTTGTACCCCTCTTGGTACTACTAAACTGGATCACTGTGGCATTCCTCTATCAAATCCCACTGAATATAGATCCTTGATAGGTGCCTTACAGTATTTGACATGGACTAGGCCTGATATCTCTTTTGTTGTCAATCAAGTATGCCAATTCATGCATACTCCCACTGATCTTCATCTGCAAGCTGCCAAAAGGATTATCCGATTCCTCAAAGGCACCTCTGATCATGGTTTATGGTTTCAGAAAATTAGAAAGGTTATTAGCTGTTGTTGCTGTTATGACTATAAATATCATACTGACGTAATTATTTTTCAGATAAGTAATGAAATTGTAATATTTCAGAGACACATTTTCTTCTCAGTTTCTTTAATAAATACCCAAACCACAACTTCAACGCAGTTGATAGGGATCTTTAGGATCCACGTGGGAAGGGCATATGCCCACGGTGGAAAGAAGTGGAGGTTTCTCTGCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

663

Amino Acids

75.63

Weight (kDa)

9.37

Isoelectric Point (pI)

38.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
rve	PF00665	274 - 373	6.7e-10	Integrase core domain
RVT_2	PF07727	456 - 510	4.7e-06	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48720
fragaria_vesca	FvH4_2g28692 FvH4_5g18842 FvH4_6g09151
malus_domestica	MD02G1224100.v1.1 MD05G1187300.v1.1 MD05G1333300.v1.1 MD11G1249500.v1.1 MD16G1029500.v1.1
prunus_persica	Prupe.5G008900_v2.0.a1 Prupe.6G200700_v2.0.a1 Prupe.7G019700_v2.0.a1
pyrus_communis	pycom01g03530 pycom02g12970 pycom02g19220 pycom05g10750 pycom09g02370 pycom10g16330 pycom14g07330 pycom15g16240
rosa_chinensis	RchiOBHm_Chr1g0340271 RchiOBHm_Chr1g0362001 RchiOBHm_Chr1g0382731 RchiOBHm_Chr2g0152171 RchiOBHm_Chr3g0480511 RchiOBHm_Chr4g0398841 RchiOBHm_Chr5g0081101 RchiOBHm_Chr7g0182361 RchiOBHm_Chr7g0237371
rosa_roxburghii	Rroxscaffold_160G00433850 Rroxscaffold_1G00001000 Rroxscaffold_1G00046300 Rroxscaffold_3G00252380 Rroxscaffold_3G00254550 Rroxscaffold_4G00320010 Rroxscaffold_4G00327310 Rroxscaffold_5G00336230 Rroxscaffold_7G00179260
rosa_samantha	Rh3BG173000
rosa_wichuraiana	Rw4G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1987
Acc36I	ACCTGC	1 cut(s)	862
Acc65I	GGTACC	1 cut(s)	1397
AccB1I	GGYRCC	5 cut(s)	405, 1397, 1505, 1598, 1727
AccB7I	CCANNNNNTGG	1 cut(s)	823
AccBSI	CCGCTC	1 cut(s)	196
AccI	GTMKAC	1 cut(s)	920
AciI	CCGC	3 cut(s)	194, 423, 514
AclWI	GGATC	8 cut(s)	174, 378, 495, 1554, 1581, 1924, 1928, 1937
AcsI	RAATTY	4 cut(s)	220, 230, 743, 1043
AcuI	CTGAAG	2 cut(s)	720, 1469
AcvI	CACGTG	1 cut(s)	1936
AfaI	GTAC	5 cut(s)	14, 249, 1399, 1522, 1534
AfiI	CCNNNNNNNGG	2 cut(s)	823, 1262
AjnI	CCWGG	1 cut(s)	923
AjuI	GAANNNNNNNTTGG	4 cut(s)	330, 362, 984, 1016
Alw21I	GWGCWC	1 cut(s)	448
Alw26I	GTCTC	3 cut(s)	1157, 1372, 1849
AlwI	GGATC	8 cut(s)	174, 378, 495, 1554, 1581, 1924, 1928, 1937
AoxI	GGCC	3 cut(s)	169, 655, 1625
ApeKI	GCWGC	6 cut(s)	398, 797, 1335, 1338, 1341, 1697
ApoI	RAATTY	4 cut(s)	220, 230, 743, 1043
AseI	ATTAAT	1 cut(s)	1245
Asp718I	GGTACC	1 cut(s)	1397
AspS9I	GGNCC	3 cut(s)	425, 655, 851
AsuHPI	GGTGA	2 cut(s)	1052, 1296
AvaII	GGWCC	2 cut(s)	425, 851
BaeI	ACNNNNGTAYC	2 cut(s)	1381, 1414
BamHI	GGATCC	1 cut(s)	1929
BanI	GGYRCC	5 cut(s)	405, 1397, 1505, 1598, 1727
BbrPI	CACGTG	1 cut(s)	1936
BbsI	GAAGAC	2 cut(s)	509, 1259
Bbv12I	GWGCWC	1 cut(s)	448
BbvI	GCAGC	6 cut(s)	410, 784, 1322, 1328, 1350, 1684
BccI	CCATC	1 cut(s)	666
BceAI	ACGGC	1 cut(s)	184
BcgI	CGANNNNNNTGC	2 cut(s)	218, 252
BciT130I	CCWGG	1 cut(s)	925
BciVI	GTATCC	1 cut(s)	305
BclI	TGATCA	2 cut(s)	907, 1735
BcoDI	GTCTC	3 cut(s)	1157, 1372, 1849
BfaI	CTAG	3 cut(s)	629, 1317, 1623
BfmI	CTRYAG	3 cut(s)	545, 765, 1336
BfuAI	ACCTGC	1 cut(s)	862
BfuI	GTATCC	1 cut(s)	305
BglII	AGATCT	1 cut(s)	1326
BisI	GCNGC	6 cut(s)	399, 798, 1336, 1339, 1342, 1698
BlsI	GCNGC	6 cut(s)	400, 799, 1337, 1340, 1343, 1699
Bme1390I	CCNGG	1 cut(s)	925
Bme18I	GGWCC	2 cut(s)	425, 851
BmgT120I	GGNCC	3 cut(s)	425, 655, 851
BmiI	GGNNCC	7 cut(s)	407, 852, 1399, 1507, 1600, 1729, 1931
BmrFI	CCNGG	1 cut(s)	925
BmsI	GCATC	4 cut(s)	611, 740, 821, 1196
BpiI	GAAGAC	2 cut(s)	509, 1259
Bpu10I	CCTNAGC	1 cut(s)	1119
BpuEI	CTTGAG	1 cut(s)	403
BsaAI	YACGTR	1 cut(s)	1936
BsaBI	GATNNNNATC	3 cut(s)	266, 1686, 1919
BsaJI	CCNNGG	3 cut(s)	1280, 1349, 1954
Bsc4I	CCNNNNNNNGG	2 cut(s)	823, 1262
Bse1I	ACTGG	1 cut(s)	1548
Bse8I	GATNNNNATC	3 cut(s)	266, 1686, 1919
BseBI	CCWGG	1 cut(s)	925
BseDI	CCNNGG	3 cut(s)	1280, 1349, 1954
BseGI	GGATG	4 cut(s)	658, 812, 1387, 1436
BseJI	GATNNNNATC	3 cut(s)	266, 1686, 1919
BseLI	CCNNNNNNNGG	2 cut(s)	823, 1262
BseMII	CTCAG	4 cut(s)	147, 942, 1110, 1884
BseNI	ACTGG	1 cut(s)	1548
BseXI	GCAGC	6 cut(s)	410, 784, 1322, 1328, 1350, 1684
BshFI	GGCC	3 cut(s)	171, 657, 1627
BshNI	GGYRCC	5 cut(s)	405, 1397, 1505, 1598, 1727
BsiHKAI	GWGCWC	1 cut(s)	448
BslFI	GGGAC	1 cut(s)	864
BslI	CCNNNNNNNGG	2 cut(s)	823, 1262
BsmAI	GTCTC	3 cut(s)	1157, 1372, 1849
BsmFI	GGGAC	1 cut(s)	864
BsmI	GAATGC	1 cut(s)	1557
BsnI	GGCC	3 cut(s)	171, 657, 1627
Bsp1286I	GDGCHC	1 cut(s)	448
Bsp1407I	TGTACA	1 cut(s)	12
Bsp19I	CCATGG	1 cut(s)	1280
BspACI	CCGC	3 cut(s)	194, 423, 514
BspANI	GGCC	3 cut(s)	171, 657, 1627
BspCNI	CTCAG	4 cut(s)	146, 943, 1111, 1883
BspLI	GGNNCC	7 cut(s)	407, 852, 1399, 1507, 1600, 1729, 1931
BspMAI	CTGCAG	2 cut(s)	549, 1340
BspMI	ACCTGC	1 cut(s)	862
BspPI	GGATC	8 cut(s)	174, 378, 495, 1554, 1581, 1924, 1928, 1937
BspT107I	GGYRCC	5 cut(s)	405, 1397, 1505, 1598, 1727
BsrBI	CCGCTC	1 cut(s)	196
BsrGI	TGTACA	1 cut(s)	12
BsrI	ACTGG	1 cut(s)	1548
BssECI	CCNNGG	3 cut(s)	1280, 1349, 1954
BssNAI	GTATAC	1 cut(s)	921
BssT1I	CCWWGG	2 cut(s)	1280, 1349
Bst1107I	GTATAC	1 cut(s)	921
Bst2UI	CCWGG	1 cut(s)	925
Bst4CI	ACNGT	4 cut(s)	839, 1553, 1608, 1958
Bst6I	CTCTTC	2 cut(s)	190, 195
BstAUI	TGTACA	1 cut(s)	12
BstBAI	YACGTR	1 cut(s)	1936
BstC8I	GCNNGC	2 cut(s)	1171, 1695
BstDSI	CCRYGG	2 cut(s)	1280, 1954
BstF5I	GGATG	4 cut(s)	658, 812, 1387, 1436
BstMAI	GTCTC	3 cut(s)	1157, 1372, 1849
BstMWI	GCNNNNNNNGC	5 cut(s)	45, 414, 477, 1341, 1782
BstNI	CCWGG	1 cut(s)	925
BstSCI	CCNGG	1 cut(s)	923
BstSFI	CTRYAG	3 cut(s)	545, 765, 1336
BstV1I	GCAGC	6 cut(s)	410, 784, 1322, 1328, 1350, 1684
BstV2I	GAAGAC	2 cut(s)	509, 1259
BstX2I	RGATCY	4 cut(s)	1326, 1586, 1920, 1929
BstXI	CCANNNNNNTGG	1 cut(s)	394
BstYI	RGATCY	4 cut(s)	1326, 1586, 1920, 1929
BstZ17I	GTATAC	1 cut(s)	921
BsuI	GTATCC	1 cut(s)	305
BsuRI	GGCC	3 cut(s)	171, 657, 1627
BtgI	CCRYGG	2 cut(s)	1280, 1954
BtgZI	GCGATG	1 cut(s)	137
BtsCI	GGATG	4 cut(s)	658, 812, 1387, 1436
BtsI	GCAGTG	1 cut(s)	597
BtsIMutI	CAGTG	5 cut(s)	597, 835, 1549, 1575, 1677
BveI	ACCTGC	1 cut(s)	862
Cac8I	GCNNGC	2 cut(s)	1171, 1695
Cfr13I	GGNCC	3 cut(s)	425, 655, 851
CseI	GACGC	1 cut(s)	514
CsiI	ACCWGGT	1 cut(s)	923
Csp6I	GTAC	5 cut(s)	13, 248, 1398, 1521, 1533
CviAII	CATG	9 cut(s)	402, 440, 1082, 1193, 1281, 1515, 1617, 1666, 1739
CviQI	GTAC	5 cut(s)	13, 248, 1398, 1521, 1533
DraI	TTTAAA	1 cut(s)	979
Eam1104I	CTCTTC	2 cut(s)	190, 195
EarI	CTCTTC	2 cut(s)	190, 195
Eco130I	CCWWGG	2 cut(s)	1280, 1349
Eco147I	AGGCCT	1 cut(s)	1627
Eco32I	GATATC	1 cut(s)	1633
Eco47I	GGWCC	2 cut(s)	425, 851
Eco57I	CTGAAG	2 cut(s)	720, 1469
Eco72I	CACGTG	1 cut(s)	1936
EcoO109I	RGGNCCY	1 cut(s)	851
EcoRI	GAATTC	2 cut(s)	230, 743
EcoRII	CCWGG	1 cut(s)	923
EcoRV	GATATC	1 cut(s)	1633
EcoT14I	CCWWGG	2 cut(s)	1280, 1349
EcoT22I	ATGCAT	1 cut(s)	1671
ErhI	CCWWGG	2 cut(s)	1280, 1349
FaeI	CATG	9 cut(s)	405, 443, 1085, 1196, 1284, 1518, 1620, 1669, 1742
FalI	AAGNNNNNCTT	2 cut(s)	1056, 1088
FaqI	GGGAC	1 cut(s)	864
FatI	CATG	9 cut(s)	401, 439, 1081, 1192, 1280, 1514, 1616, 1665, 1738
FauI	CCCGC	1 cut(s)	507
FauNDI	CATATG	2 cut(s)	985, 1948
FbaI	TGATCA	2 cut(s)	907, 1735
FblI	GTMKAC	1 cut(s)	920
Fnu4HI	GCNGC	6 cut(s)	399, 798, 1336, 1339, 1342, 1698
FokI	GGATG	4 cut(s)	645, 799, 1394, 1423
Fsp4HI	GCNGC	6 cut(s)	399, 798, 1336, 1339, 1342, 1698
FspBI	CTAG	3 cut(s)	629, 1317, 1623
GluI	GCNGC	6 cut(s)	399, 798, 1336, 1339, 1342, 1698
HaeIII	GGCC	3 cut(s)	171, 657, 1627
HgaI	GACGC	1 cut(s)	514
Hin1II	CATG	9 cut(s)	405, 443, 1085, 1196, 1284, 1518, 1620, 1669, 1742
HindIII	AAGCTT	2 cut(s)	782, 1065
HinfI	GANTC	3 cut(s)	322, 1031, 1716
HphI	GGTGA	2 cut(s)	1052, 1296
Hpy166II	GTNNAC	3 cut(s)	13, 921, 1429
Hpy188III	TCNNGA	7 cut(s)	177, 265, 278, 381, 634, 1118, 1475
Hpy8I	GTNNAC	3 cut(s)	13, 921, 1429
HpyAV	CCTTC	5 cut(s)	353, 600, 1412, 1496, 1935
HpyCH4III	ACNGT	4 cut(s)	839, 1553, 1608, 1958
HpyCH4IV	ACGT	2 cut(s)	1812, 1935
HpyF10VI	GCNNNNNNNGC	5 cut(s)	45, 414, 477, 1341, 1782
HpySE526I	ACGT	2 cut(s)	1812, 1935
Hsp92II	CATG	9 cut(s)	405, 443, 1085, 1196, 1284, 1518, 1620, 1669, 1742
KpnI	GGTACC	1 cut(s)	1401
Ksp22I	TGATCA	2 cut(s)	907, 1735
Lsp1109I	GCAGC	6 cut(s)	410, 784, 1322, 1328, 1350, 1684
LweI	GCATC	4 cut(s)	611, 740, 821, 1196
MabI	ACCWGGT	1 cut(s)	923
MaeI	CTAG	3 cut(s)	629, 1317, 1623
MaeII	ACGT	2 cut(s)	1812, 1935
MaeIII	GTNAC	1 cut(s)	970
MbiI	CCGCTC	1 cut(s)	196
MflI	RGATCY	4 cut(s)	1326, 1586, 1920, 1929
MhlI	GDGCHC	1 cut(s)	448
MlyI	GAGTC	1 cut(s)	331
MmeI	TCCRAC	2 cut(s)	1359, 1401
Mph1103I	ATGCAT	1 cut(s)	1671
MseI	TTAA	8 cut(s)	525, 621, 978, 1245, 1323, 1355, 1374, 1880
MslI	CAYNNNNRTG	2 cut(s)	72, 840
MspA1I	CMGCKG	1 cut(s)	1341
MspR9I	CCNGG	1 cut(s)	925
Mva1269I	GAATGC	1 cut(s)	1557
MvaI	CCWGG	1 cut(s)	925
MwoI	GCNNNNNNNGC	5 cut(s)	45, 414, 477, 1341, 1782
NcoI	CCATGG	1 cut(s)	1280
NdeI	CATATG	2 cut(s)	985, 1948
NlaIII	CATG	9 cut(s)	405, 443, 1085, 1196, 1284, 1518, 1620, 1669, 1742
NlaIV	GGNNCC	7 cut(s)	407, 852, 1399, 1507, 1600, 1729, 1931
NsiI	ATGCAT	1 cut(s)	1671
PceI	AGGCCT	1 cut(s)	1627
PctI	GAATGC	1 cut(s)	1557
PfeI	GAWTC	2 cut(s)	1031, 1716
PflMI	CCANNNNNTGG	1 cut(s)	823
PkrI	GCNGC	6 cut(s)	400, 799, 1337, 1340, 1343, 1699
PleI	GAGTC	1 cut(s)	330
PmaCI	CACGTG	1 cut(s)	1936
PmlI	CACGTG	1 cut(s)	1936
PpsI	GAGTC	1 cut(s)	330
Ppu21I	YACGTR	1 cut(s)	1936
PpuMI	RGGWCCY	1 cut(s)	851
PshBI	ATTAAT	1 cut(s)	1245
PsiI	TTATAA	1 cut(s)	1987
Psp5II	RGGWCCY	1 cut(s)	851
Psp6I	CCWGG	1 cut(s)	923
PspCI	CACGTG	1 cut(s)	1936
PspGI	CCWGG	1 cut(s)	923
PspN4I	GGNNCC	7 cut(s)	407, 852, 1399, 1507, 1600, 1729, 1931
PspPI	GGNCC	3 cut(s)	425, 655, 851
PspPPI	RGGWCCY	1 cut(s)	851
PstI	CTGCAG	2 cut(s)	549, 1340
PsuI	RGATCY	4 cut(s)	1326, 1586, 1920, 1929
PvuII	CAGCTG	1 cut(s)	1341
RsaI	GTAC	5 cut(s)	14, 249, 1399, 1522, 1534
RsaNI	GTAC	5 cut(s)	13, 248, 1398, 1521, 1533
RseI	CAYNNNNRTG	2 cut(s)	72, 840
SaqAI	TTAA	8 cut(s)	525, 621, 978, 1245, 1323, 1355, 1374, 1880
SatI	GCNGC	6 cut(s)	399, 798, 1336, 1339, 1342, 1698
Sau96I	GGNCC	3 cut(s)	425, 655, 851
SchI	GAGTC	1 cut(s)	331
ScrFI	CCNGG	1 cut(s)	925
SduI	GDGCHC	1 cut(s)	448
SexAI	ACCWGGT	1 cut(s)	923
SfaNI	GCATC	4 cut(s)	611, 740, 821, 1196
SfcI	CTRYAG	3 cut(s)	545, 765, 1336
SinI	GGWCC	2 cut(s)	425, 851
SmiMI	CAYNNNNRTG	2 cut(s)	72, 840
SmlI	CTYRAG	1 cut(s)	418
SmoI	CTYRAG	1 cut(s)	418
SseBI	AGGCCT	1 cut(s)	1627
SsiI	CCGC	3 cut(s)	194, 423, 514
SspI	AATATT	5 cut(s)	111, 619, 997, 1208, 1848
SspMI	CTAG	3 cut(s)	629, 1317, 1623
StuI	AGGCCT	1 cut(s)	1627
StyD4I	CCNGG	1 cut(s)	923
StyI	CCWWGG	2 cut(s)	1280, 1349
TaaI	ACNGT	4 cut(s)	839, 1553, 1608, 1958
TaiI	ACGT	2 cut(s)	1815, 1938
TaqI	TCGA	4 cut(s)	178, 228, 260, 266
TatI	WGTACW	2 cut(s)	12, 247
TfiI	GAWTC	2 cut(s)	1031, 1716
Tru1I	TTAA	8 cut(s)	525, 621, 978, 1245, 1323, 1355, 1374, 1880
Tru9I	TTAA	8 cut(s)	525, 621, 978, 1245, 1323, 1355, 1374, 1880
TscAI	CASTG	5 cut(s)	604, 842, 1556, 1582, 1684
TseI	GCWGC	6 cut(s)	398, 797, 1335, 1338, 1341, 1697
TspDTI	ATGAA	7 cut(s)	114, 140, 1286, 1445, 1654, 1676, 1851
TspGWI	ACGGA	1 cut(s)	287
TspRI	CASTG	5 cut(s)	604, 842, 1556, 1582, 1684
Van91I	CCANNNNNTGG	1 cut(s)	823
VpaK11BI	GGWCC	2 cut(s)	425, 851
VspI	ATTAAT	1 cut(s)	1245
XapI	RAATTY	4 cut(s)	220, 230, 743, 1043
XmiI	GTMKAC	1 cut(s)	920
XspI	CTAG	3 cut(s)	629, 1317, 1623
Zsp2I	ATGCAT	1 cut(s)	1671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.