MD05G1246700.v1.1

UDP-glucose flavonoid 3-O-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0002688
Physical Location & Seq
Reverse (-)
37803768 .. 37804957
1190 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1246700.v1.1.491

Sequence Viewer

Length: 1029 bp
ATGGGCTACATATCCCTACTCATACAAAACCACAAACCCCACGTAAAGAATGCAATCACCAAACTCATGTCGTCCCACTCGGCCGAGTCAAACTCATCTAACTCGGACCGGGTTGTAGGGTTTTTTGTTGACATGTTTTGTACTTCCATGATTGAGGTTGCTAACGAGCTTGACATTACTTGTTACCTGTATTTTGCTCCCCCAGCAACTTTTCTGAGCTTTATGCTCCACTTACCATTCTTGGATGCCCAAAACCCCCGCCGATTTAGAGAATTGGAGCGGCATGCACTTGACTCGTTGAATACGAGTCAAGTGCCACAGGTTTACCCAATTGGGCCGGTTCTTGATCTTTACGAACCGACTCAAAAGCGGGATTTAAACCAATATGAAAGCGTCATCAGGTGGCTCGATGACCAGCCCTCATCATCGGTCATGTTGTTATGCTTCGGAAGCATGGGGAGTCTTAGTGGACCACAGGTGCGGGAGATAGCATATGGGCTTGAACGTGCCGGGGTCCGATTCATATGGGCATTACGTGAGCCGCCCAAGTCCCAATTGGATCTCCCAAGCGACCACGCGAACGTGGAAGATGTGTTGCCCAATGGGTTCTTGGAGCGGACATGTGAATTGGGCATGGTGTGCGGGTGGATCCCACAAGCGCAGATCTTGGCCCACCAATCGATCGGAGGGTTCACATCGCATTGTGGTTGGAACTCGATTTTCGAGAGCTTGTGGTACGGTGTACCGATTGCCACGTGGCCGATTTACGCGGAGCAACAAATGAATGCCTTTGAGATGGTGAAGGAATTGAGATTGGCAATTGAGATTAGGCTGGATTATAGAGAGGGTAGTGATTTGGTGATGGGAGAGGAGGTGGATATAAGCATAAAGCGGCTGATGAACGGTGGTGATGTGGTGAGAGGTAGGGTGAAAGAGATGAGAGAGAAGAGTAGGATTGCTTTGATGGAAAATGGGTCTTCATACCAAGCACTCGGAGTTTTAATCAGAAACTTAGTGCCCAAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

343

Amino Acids

38.71

Weight (kDa)

5.45

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 143 - 268 1.6e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 280, 616
AccII CGCG 2 cut(s) 578, 770
AciI CCGC 9 cut(s) 259, 280, 370, 481, 542, 616, 642, 770, 892
AclWI GGATC 3 cut(s) 567, 643, 656
AcoI YGGCCR 2 cut(s) 81, 758
AcvI CACGTG 1 cut(s) 756
AfaI GTAC 3 cut(s) 142, 737, 744
AflIII ACRYGT 2 cut(s) 132, 620
AgsI TTSAA 2 cut(s) 301, 503
AluBI AGCT 3 cut(s) 169, 219, 729
AluI AGCT 3 cut(s) 169, 219, 729
AlwI GGATC 3 cut(s) 567, 643, 656
AoxI GGCC 4 cut(s) 81, 335, 669, 758
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 5 cut(s) 106, 335, 470, 514, 670
AsuC2I CCSGG 2 cut(s) 110, 511
AsuHPI GGTGA 6 cut(s) 49, 811, 871, 920, 928, 940
AvaII GGWCC 3 cut(s) 106, 470, 514
BaeGI GKGCMC 1 cut(s) 1020
BamHI GGATCC 1 cut(s) 648
BbrPI CACGTG 1 cut(s) 756
BbsI GAAGAC 1 cut(s) 969
BccI CCATC 3 cut(s) 790, 856, 958
BcgI CGANNNNNNTGC 4 cut(s) 276, 295, 310, 329
BcnI CCSGG 2 cut(s) 110, 511
BglII AGATCT 1 cut(s) 663
BisI GCNGC 3 cut(s) 281, 542, 893
BlsI GCNGC 3 cut(s) 282, 543, 894
Bme1390I CCNGG 2 cut(s) 110, 511
Bme18I GGWCC 3 cut(s) 106, 470, 514
BmgT120I GGNCC 5 cut(s) 106, 335, 470, 514, 670
BmiI GGNNCC 2 cut(s) 515, 650
BmrFI CCNGG 2 cut(s) 110, 511
BmsI GCATC 1 cut(s) 235
BpiI GAAGAC 1 cut(s) 969
BplI GAGNNNNNCTC 2 cut(s) 77, 109
BpuMI CCSGG 2 cut(s) 110, 511
Bsa29I ATCGAT 1 cut(s) 680
BsaAI YACGTR 3 cut(s) 43, 536, 756
BsaJI CCNNGG 1 cut(s) 510
BsaXI ACNNNNNCTCC 4 cut(s) 451, 481, 858, 888
Bse118I RCCGGY 1 cut(s) 337
BseCI ATCGAT 1 cut(s) 680
BseDI CCNNGG 1 cut(s) 510
BseGI GGATG 1 cut(s) 250
BseMII CTCAG 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 884
BseSI GKGCMC 1 cut(s) 1020
BseX3I CGGCCG 1 cut(s) 81
BseYI CCCAGC 1 cut(s) 202
Bsh1236I CGCG 2 cut(s) 578, 770
Bsh1285I CGRYCG 2 cut(s) 84, 684
BshFI GGCC 4 cut(s) 83, 337, 671, 760
BshVI ATCGAT 1 cut(s) 680
BsiEI CGRYCG 2 cut(s) 84, 684
BsiSI CCGG 3 cut(s) 109, 338, 510
BslFI GGGAC 2 cut(s) 58, 535
BsmFI GGGAC 2 cut(s) 58, 535
BsmI GAATGC 2 cut(s) 55, 790
BsnI GGCC 4 cut(s) 83, 337, 671, 760
Bsp1286I GDGCHC 1 cut(s) 1020
Bsp143I GATC 5 cut(s) 346, 559, 648, 663, 681
BspACI CCGC 9 cut(s) 259, 280, 370, 481, 542, 616, 642, 770, 892
BspANI GGCC 4 cut(s) 83, 337, 671, 760
BspCNI CTCAG 1 cut(s) 207
BspDI ATCGAT 1 cut(s) 680
BspFNI CGCG 2 cut(s) 578, 770
BspLI GGNNCC 2 cut(s) 515, 650
BspPI GGATC 3 cut(s) 567, 643, 656
BsrBI CCGCTC 2 cut(s) 280, 616
BsrFI RCCGGY 1 cut(s) 337
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 1 cut(s) 510
BssMI GATC 5 cut(s) 346, 559, 648, 663, 681
Bst4CI ACNGT 2 cut(s) 740, 905
Bst6I CTCTTC 1 cut(s) 941
BstAPI GCANNNNNTGC 1 cut(s) 639
BstBAI YACGTR 3 cut(s) 43, 536, 756
BstC8I GCNNGC 1 cut(s) 285
BstDEI CTNAG 3 cut(s) 215, 464, 1012
BstF5I GGATG 1 cut(s) 250
BstFNI CGCG 2 cut(s) 578, 770
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 5 cut(s) 349, 562, 651, 666, 684
BstMBI GATC 5 cut(s) 346, 559, 648, 663, 681
BstMCI CGRYCG 2 cut(s) 84, 684
BstMWI GCNNNNNNNGC 3 cut(s) 203, 450, 639
BstNSI RCATGY 3 cut(s) 136, 287, 624
BstSCI CCNGG 2 cut(s) 108, 509
BstSLI GKGCMC 1 cut(s) 1020
BstUI CGCG 2 cut(s) 578, 770
BstV2I GAAGAC 1 cut(s) 969
BstX2I RGATCY 3 cut(s) 559, 648, 663
BstYI RGATCY 3 cut(s) 559, 648, 663
BstZI CGGCCG 1 cut(s) 81
Bsu15I ATCGAT 1 cut(s) 680
BsuRI GGCC 4 cut(s) 83, 337, 671, 760
BsuTUI ATCGAT 1 cut(s) 680
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 1 cut(s) 250
Cac8I GCNNGC 1 cut(s) 285
CfoI GCGC 1 cut(s) 661
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 5 cut(s) 106, 335, 470, 514, 670
ClaI ATCGAT 1 cut(s) 680
CpoI CGGWCCG 1 cut(s) 106
CseI GACGC 1 cut(s) 382
Csp6I GTAC 3 cut(s) 141, 736, 743
CspI CGGWCCG 1 cut(s) 106
CviAII CATG 8 cut(s) 67, 133, 148, 284, 433, 454, 621, 634
CviQI GTAC 3 cut(s) 141, 736, 743
DdeI CTNAG 3 cut(s) 215, 464, 1012
DpnI GATC 5 cut(s) 348, 561, 650, 665, 683
DpnII GATC 5 cut(s) 346, 559, 648, 663, 681
DraI TTTAAA 1 cut(s) 378
EaeI YGGCCR 2 cut(s) 81, 758
EagI CGGCCG 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 941
EarI CTCTTC 1 cut(s) 941
EclXI CGGCCG 1 cut(s) 81
Eco47I GGWCC 3 cut(s) 106, 470, 514
Eco52I CGGCCG 1 cut(s) 81
Eco72I CACGTG 1 cut(s) 756
FaeI CATG 8 cut(s) 70, 136, 151, 287, 436, 457, 624, 637
FaqI GGGAC 2 cut(s) 58, 535
FatI CATG 8 cut(s) 66, 132, 147, 283, 432, 453, 620, 633
FauI CCCGC 4 cut(s) 266, 363, 474, 635
FauNDI CATATG 2 cut(s) 493, 524
Fnu4HI GCNGC 3 cut(s) 281, 542, 893
FokI GGATG 1 cut(s) 257
Fsp4HI GCNGC 3 cut(s) 281, 542, 893
GlaI GCGC 1 cut(s) 660
GluI GCNGC 3 cut(s) 281, 542, 893
GsaI CCCAGC 1 cut(s) 206
HaeIII GGCC 4 cut(s) 83, 337, 671, 760
HapII CCGG 3 cut(s) 109, 338, 510
HgaI GACGC 1 cut(s) 382
HhaI GCGC 1 cut(s) 661
Hin1II CATG 8 cut(s) 70, 136, 151, 287, 436, 457, 624, 637
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 6 cut(s) 86, 293, 307, 361, 460, 519
HpaII CCGG 3 cut(s) 109, 338, 510
HphI GGTGA 6 cut(s) 49, 811, 871, 920, 928, 940
Hpy166II GTNNAC 5 cut(s) 130, 325, 470, 693, 743
Hpy188I TCNGA 7 cut(s) 106, 216, 449, 518, 686, 995, 1007
Hpy188III TCNNGA 2 cut(s) 344, 724
Hpy8I GTNNAC 5 cut(s) 130, 325, 470, 693, 743
HpyAV CCTTC 1 cut(s) 796
HpyCH4III ACNGT 2 cut(s) 740, 905
HpyCH4IV ACGT 5 cut(s) 42, 505, 535, 582, 755
HpyCH4V TGCA 2 cut(s) 53, 287
HpyF10VI GCNNNNNNNGC 3 cut(s) 203, 450, 639
HpyF3I CTNAG 3 cut(s) 215, 464, 1012
HpySE526I ACGT 5 cut(s) 42, 505, 535, 582, 755
Hsp92II CATG 8 cut(s) 70, 136, 151, 287, 436, 457, 624, 637
HspAI GCGC 1 cut(s) 659
Kzo9I GATC 5 cut(s) 346, 559, 648, 663, 681
LmnI GCTCC 5 cut(s) 202, 231, 277, 613, 772
LweI GCATC 1 cut(s) 235
MaeII ACGT 5 cut(s) 42, 505, 535, 582, 755
MaeIII GTNAC 1 cut(s) 182
MalI GATC 5 cut(s) 348, 561, 650, 665, 683
MbiI CCGCTC 2 cut(s) 280, 616
MboI GATC 5 cut(s) 346, 559, 648, 663, 681
MboII GAAGA 3 cut(s) 599, 958, 969
MfeI CAATTG 3 cut(s) 330, 554, 819
MflI RGATCY 3 cut(s) 559, 648, 663
MhlI GDGCHC 1 cut(s) 1020
MluCI AATT 6 cut(s) 272, 330, 554, 626, 806, 819
MlyI GAGTC 5 cut(s) 95, 287, 316, 355, 469
MmeI TCCRAC 1 cut(s) 689
MnlI CCTC 7 cut(s) 148, 430, 680, 838, 862, 865, 914
MseI TTAA 2 cut(s) 377, 1001
MspI CCGG 3 cut(s) 109, 338, 510
MspR9I CCNGG 2 cut(s) 110, 511
MunI CAATTG 3 cut(s) 330, 554, 819
Mva1269I GAATGC 2 cut(s) 55, 790
MvnI CGCG 2 cut(s) 578, 770
MwoI GCNNNNNNNGC 3 cut(s) 203, 450, 639
NciI CCSGG 2 cut(s) 110, 511
NdeI CATATG 2 cut(s) 493, 524
NdeII GATC 5 cut(s) 346, 559, 648, 663, 681
NlaIII CATG 8 cut(s) 70, 136, 151, 287, 436, 457, 624, 637
NlaIV GGNNCC 2 cut(s) 515, 650
NmeAIII GCCGAG 2 cut(s) 59, 109
NspI RCATGY 3 cut(s) 136, 287, 624
PaeI GCATGC 1 cut(s) 287
PciI ACATGT 2 cut(s) 132, 620
PcsI WCGNNNNNNNCGW 1 cut(s) 302
PctI GAATGC 2 cut(s) 55, 790
PfeI GAWTC 1 cut(s) 519
PkrI GCNGC 3 cut(s) 282, 543, 894
Ple19I CGATCG 1 cut(s) 684
PleI GAGTC 5 cut(s) 94, 287, 315, 355, 468
PmaCI CACGTG 1 cut(s) 756
PmlI CACGTG 1 cut(s) 756
PpsI GAGTC 5 cut(s) 94, 287, 315, 355, 468
Ppu21I YACGTR 3 cut(s) 43, 536, 756
PscI ACATGT 2 cut(s) 132, 620
PspCI CACGTG 1 cut(s) 756
PspFI CCCAGC 1 cut(s) 202
PspN4I GGNNCC 2 cut(s) 515, 650
PspPI GGNCC 5 cut(s) 106, 335, 470, 514, 670
PsuI RGATCY 3 cut(s) 559, 648, 663
PvuI CGATCG 1 cut(s) 684
RsaI GTAC 3 cut(s) 142, 737, 744
RsaNI GTAC 3 cut(s) 141, 736, 743
Rsr2I CGGWCCG 1 cut(s) 106
RsrII CGGWCCG 1 cut(s) 106
SaqAI TTAA 2 cut(s) 377, 1001
SatI GCNGC 3 cut(s) 281, 542, 893
Sau3AI GATC 5 cut(s) 346, 559, 648, 663, 681
Sau96I GGNCC 5 cut(s) 106, 335, 470, 514, 670
SchI GAGTC 5 cut(s) 95, 287, 316, 355, 469
ScrFI CCNGG 2 cut(s) 110, 511
SduI GDGCHC 1 cut(s) 1020
SfaNI GCATC 1 cut(s) 235
SinI GGWCC 3 cut(s) 106, 470, 514
SphI GCATGC 1 cut(s) 287
Sse9I AATT 6 cut(s) 272, 330, 554, 626, 806, 819
SsiI CCGC 9 cut(s) 259, 280, 370, 481, 542, 616, 642, 770, 892
StyD4I CCNGG 2 cut(s) 108, 509
TaaI ACNGT 2 cut(s) 740, 905
TaiI ACGT 5 cut(s) 45, 508, 538, 585, 758
TaqI TCGA 4 cut(s) 408, 680, 716, 723
TaqII GACCGA 1 cut(s) 418
TasI AATT 6 cut(s) 272, 330, 554, 626, 806, 819
TatI WGTACW 1 cut(s) 140
TauI GCSGC 3 cut(s) 283, 544, 895
TfiI GAWTC 1 cut(s) 519
Tru1I TTAA 2 cut(s) 377, 1001
Tru9I TTAA 2 cut(s) 377, 1001
TspDTI ATGAA 5 cut(s) 402, 511, 797, 914, 969
VpaK11BI GGWCC 3 cut(s) 106, 470, 514
XceI RCATGY 3 cut(s) 136, 287, 624
XcmI CCANNNNNNNNNTGG 2 cut(s) 553, 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.