Rmu_co8295101.1_g000001

UDP-glucose flavonoid 3-O-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8295101.1
OG0002688
Physical Location & Seq
Forward (+)
528 .. 880
353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8295101.1_g000001.1.cds

Sequence Viewer

Length: 347 bp
atgagcaaatcggaggtggtgttcatctcaaccccccaaatcggaaacctagtcccactcgtcgagttcgctcagctcctagtcaaccatgaccctcgattccacgccaccatcctcatcatcaccatgccccaaagacccaccgtcaacacttacatccaatcccgcgccgccgcgtcagccaccagcatcaacttcctccacctccccatcgtagatccacttgcagaggatgagtaccagtcctccatcgcctacctttccctacttatacaaaaacacaagccccacgtaaagcatgctatagccgacctcatgtcctctgccgagtcaaaccgagttgttgc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

116

Amino Acids

12.83

Weight (kDa)

6.57

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 168, 176
AciI CCGC 3 cut(s) 166, 171, 174
AclWI GGATC 1 cut(s) 212
AfaI GTAC 1 cut(s) 239
AfiI CCNNNNNNNGG 1 cut(s) 41
AhdI GACNNNNNGTC 2 cut(s) 143, 316
AloI GAACNNNNNNTCC 1 cut(s) 37
AluBI AGCT 1 cut(s) 76
AluI AGCT 1 cut(s) 76
AlwI GGATC 1 cut(s) 212
AspLEI GCGC 1 cut(s) 170
AsuHPI GGTGA 1 cut(s) 115
BccI CCATC 3 cut(s) 119, 218, 257
BfaI CTAG 2 cut(s) 50, 80
BfmI CTRYAG 1 cut(s) 303
BisI GCNGC 2 cut(s) 171, 174
BlpI GCTNAGC 1 cut(s) 72
BlsI GCNGC 2 cut(s) 172, 175
BmeRI GACNNNNNGTC 2 cut(s) 143, 316
BmsI GCATC 1 cut(s) 198
Bpu1102I GCTNAGC 1 cut(s) 72
BsaAI YACGTR 1 cut(s) 292
BsaXI ACNNNNNCTCC 4 cut(s) 5, 35, 230, 260
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 241
BseGI GGATG 3 cut(s) 111, 156, 238
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMII CTCAG 1 cut(s) 86
BseNI ACTGG 1 cut(s) 241
Bsh1236I CGCG 2 cut(s) 168, 176
BslFI GGGAC 1 cut(s) 38
BslI CCNNNNNNNGG 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 38
Bsp143I GATC 1 cut(s) 217
Bsp1720I GCTNAGC 1 cut(s) 72
BspACI CCGC 3 cut(s) 166, 171, 174
BspCNI CTCAG 1 cut(s) 85
BspFNI CGCG 2 cut(s) 168, 176
BspPI GGATC 1 cut(s) 212
BsrI ACTGG 1 cut(s) 241
BssMI GATC 1 cut(s) 217
Bst4CI ACNGT 1 cut(s) 145
BstBAI YACGTR 1 cut(s) 292
BstC8I GCNNGC 1 cut(s) 300
BstDEI CTNAG 1 cut(s) 72
BstF5I GGATG 3 cut(s) 111, 156, 238
BstFNI CGCG 2 cut(s) 168, 176
BstHHI GCGC 1 cut(s) 170
BstKTI GATC 1 cut(s) 220
BstMBI GATC 1 cut(s) 217
BstMWI GCNNNNNNNGC 1 cut(s) 179
BstNSI RCATGY 1 cut(s) 302
BstSFI CTRYAG 1 cut(s) 303
BstUI CGCG 2 cut(s) 168, 176
BstX2I RGATCY 1 cut(s) 217
BstYI RGATCY 1 cut(s) 217
BtgZI GCGATG 1 cut(s) 235
BtsCI GGATG 3 cut(s) 111, 156, 238
Cac8I GCNNGC 1 cut(s) 300
CfoI GCGC 1 cut(s) 170
CseI GACGC 1 cut(s) 165
Csp6I GTAC 1 cut(s) 238
CviAII CATG 4 cut(s) 89, 127, 299, 316
CviJI RGCY 4 cut(s) 76, 182, 286, 308
CviKI_1 RGCY 4 cut(s) 76, 182, 286, 308
CviQI GTAC 1 cut(s) 238
DdeI CTNAG 1 cut(s) 72
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
DriI GACNNNNNGTC 2 cut(s) 143, 316
Eam1105I GACNNNNNGTC 2 cut(s) 143, 316
FaeI CATG 4 cut(s) 92, 130, 302, 319
FaiI YATR 6 cut(s) 90, 128, 272, 300, 305, 317
FaqI GGGAC 1 cut(s) 38
FatI CATG 4 cut(s) 88, 126, 298, 315
FauI CCCGC 1 cut(s) 173
Fnu4HI GCNGC 2 cut(s) 171, 174
FokI GGATG 3 cut(s) 98, 143, 245
Fsp4HI GCNGC 2 cut(s) 171, 174
FspBI CTAG 2 cut(s) 50, 80
GlaI GCGC 1 cut(s) 169
GluI GCNGC 2 cut(s) 171, 174
HgaI GACGC 1 cut(s) 165
HhaI GCGC 1 cut(s) 170
Hin1II CATG 4 cut(s) 92, 130, 302, 319
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HincII GTYRAC 2 cut(s) 85, 148
HindII GTYRAC 2 cut(s) 85, 148
HinfI GANTC 2 cut(s) 99, 329
HphI GGTGA 1 cut(s) 115
Hpy166II GTNNAC 2 cut(s) 85, 148
Hpy188I TCNGA 2 cut(s) 13, 44
Hpy8I GTNNAC 2 cut(s) 85, 148
Hpy99I CGWCG 1 cut(s) 65
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 1 cut(s) 227
HpyF10VI GCNNNNNNNGC 1 cut(s) 179
HpyF3I CTNAG 1 cut(s) 72
HpySE526I ACGT 1 cut(s) 291
Hsp92II CATG 4 cut(s) 92, 130, 302, 319
HspAI GCGC 1 cut(s) 168
Kzo9I GATC 1 cut(s) 217
LmnI GCTCC 1 cut(s) 81
LpnPI CCDG 2 cut(s) 199, 254
LweI GCATC 1 cut(s) 198
MaeI CTAG 2 cut(s) 50, 80
MaeII ACGT 1 cut(s) 291
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MflI RGATCY 1 cut(s) 217
MlyI GAGTC 1 cut(s) 338
MnlI CCTC 9 cut(s) 7, 105, 125, 209, 215, 223, 256, 323, 331
MslI CAYNNNNRTG 1 cut(s) 125
MvnI CGCG 2 cut(s) 168, 176
MwoI GCNNNNNNNGC 1 cut(s) 179
NdeII GATC 1 cut(s) 217
NlaIII CATG 4 cut(s) 92, 130, 302, 319
NspI RCATGY 1 cut(s) 302
PaeI GCATGC 1 cut(s) 302
PfeI GAWTC 1 cut(s) 99
PkrI GCNGC 2 cut(s) 172, 175
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
Ppu21I YACGTR 1 cut(s) 292
PsuI RGATCY 1 cut(s) 217
RsaI GTAC 1 cut(s) 239
RsaNI GTAC 1 cut(s) 238
RseI CAYNNNNRTG 1 cut(s) 125
SatI GCNGC 2 cut(s) 171, 174
Sau3AI GATC 1 cut(s) 217
SchI GAGTC 1 cut(s) 338
SetI ASST 7 cut(s) 18, 51, 78, 207, 261, 294, 315
SfaNI GCATC 1 cut(s) 198
SfcI CTRYAG 1 cut(s) 303
SmiMI CAYNNNNRTG 1 cut(s) 125
SphI GCATGC 1 cut(s) 302
SsiI CCGC 3 cut(s) 166, 171, 174
SspMI CTAG 2 cut(s) 50, 80
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 1 cut(s) 294
TaqI TCGA 2 cut(s) 63, 97
TauI GCSGC 2 cut(s) 173, 176
TfiI GAWTC 1 cut(s) 99
TspDTI ATGAA 1 cut(s) 13
XceI RCATGY 1 cut(s) 302
XspI CTAG 2 cut(s) 50, 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.