RLG00000032583

UDP-glucose flavonoid 3-O-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0002688
Physical Location & Seq
Forward (+)
16754376 .. 16755746
1371 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032583

Sequence Viewer

Length: 1239 bp
ATGAACAAATTGGAGGTGGTGTTCATCTCAACCCCCGCAATCGGAAACCTAGTCCCACTCGTCGAGTTCGCTCAGCTCCTAGTCAACCATGACCCTCGATTCCACGCCACCATCCTCATCATCACCATGCCCCAAAGACCCACCGTCAACAATTACATCCAATCCCGCGCCGCCGCGTCAGCCACCAGCATCAACTTCCTCCACCTCCCCATCGTAGACCCACTTGCAGAGGATGAGTACCAGTCCTCCATCGCCTACCTTTCCCTACTTATACAAAAACACAAGCCCCACGTAAAGCATGCTCTAGCTGAACTCATGTCCTCGGCCGAGTCAAACCGAGTTGCATTTTTCGTGGACATGTTTTGTACGTCCATGATCGACGTTGCCAACGAGCTTGAGATTCCTTGTTATATGTATTTCGCTTCTCCGGCGACGTTTCTGAGCTTCATTCAGAAGAGGGATTCGTACCCTTGCTATTTATCCCATACGGCAAGGTACAAGGAACCCAAGGGTATTGTTGTCAATACGTTCAAGGAATTGGAGCCACACGCGCTTAGCTCGCTGGCTGTGAGTGATGTGCCGCGAGTTCACGCTATTGGGCCGATTCTTGATCTTAATGGGCCGGGCCAATGGCAGGATCCCGACCGGTACGAGAGCGTGGTGAAGTGGCTTGATGACCAGCCTCCATCGTCTGTGGTGCTGTTGTGCTTTCGGAGCATGGGTAGTCTTAGTGGGCCTCAGGTGAGGGAGATAGCATTTGGGCTGGAAAGGGCTGGGTTTCGGTTCTTATGGGCATTGCGTGAACCACCCAAGTCCCCTGTGTACCTCCCAAGCAAATTGGGCTTAGAGTGCGGGTGGGTTCCGCAAGTGAAGATTCTGGCCCACCAAGCGATCGGAGGGTTCATATCGCATTGCGGGTGGAACTCTATTTTGGAGAGCTTGTGGTATGGGGTACCGATTGCCACTTGGCCGATTTACGCAGAACAACAAATGAACGCGTTTGAGATGGTTAAGGAATTGGGATTGGCAGTGGAGATTAGGCTGGACTACAGGGAGGGAAGTAATTTGGTGTTGGCGGAGGAGGTGGAGAGAAGCATAAAGAGGTTGATGGACGGTGATCATGTGGTGAGGACTAAGGTGAAAGACATGAGAGAGAAGAGTAGGGGAGCACTGATGGAAAATGGGTCTGCATACAAAGCACTAGAAGGTTTAATTGAGGAACTAATGCCCAAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

413

Amino Acids

46.31

Weight (kDa)

5.98

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 232 - 347 1.1e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 952
AccB1I GGYRCC 1 cut(s) 952
AccI GTMKAC 1 cut(s) 216
AccII CGCG 5 cut(s) 168, 176, 551, 583, 998
AciI CCGC 9 cut(s) 36, 166, 171, 174, 581, 852, 863, 915, 1076
AclWI GGATC 2 cut(s) 632, 645
AcoI YGGCCR 2 cut(s) 324, 968
AfaI GTAC 7 cut(s) 239, 367, 467, 497, 650, 824, 954
AfiI CCNNNNNNNGG 2 cut(s) 41, 634
AflIII ACRYGT 2 cut(s) 357, 996
AgeI ACCGGT 1 cut(s) 645
AgsI TTSAA 1 cut(s) 532
AhdI GACNNNNNGTC 1 cut(s) 143
AjuI GAANNNNNNNTTGG 2 cut(s) 914, 946
AloI GAACNNNNNNTCC 1 cut(s) 37
AluBI AGCT 6 cut(s) 76, 308, 394, 444, 558, 939
AluI AGCT 6 cut(s) 76, 308, 394, 444, 558, 939
Alw21I GWGCWC 1 cut(s) 1171
AlwI GGATC 2 cut(s) 632, 645
AoxI GGCC 7 cut(s) 324, 599, 620, 625, 734, 879, 968
AsiGI ACCGGT 1 cut(s) 645
Asp718I GGTACC 1 cut(s) 952
AspLEI GCGC 2 cut(s) 170, 553
AspS9I GGNCC 5 cut(s) 599, 620, 625, 734, 880
AsuC2I CCSGG 1 cut(s) 624
AsuHPI GGTGA 6 cut(s) 115, 673, 754, 1127, 1138, 1150
AxyI CCTNAGG 1 cut(s) 738
BamHI GGATCC 1 cut(s) 637
BanI GGYRCC 1 cut(s) 952
Bbv12I GWGCWC 1 cut(s) 1171
BccI CCATC 7 cut(s) 119, 218, 257, 694, 1000, 1102, 1168
BceAI ACGGC 1 cut(s) 504
BclI TGATCA 1 cut(s) 1117
BcnI CCSGG 1 cut(s) 624
BfaI CTAG 4 cut(s) 50, 80, 305, 1202
BfmI CTRYAG 1 cut(s) 1048
BisI GCNGC 3 cut(s) 171, 174, 581
BlpI GCTNAGC 2 cut(s) 72, 554
BlsI GCNGC 3 cut(s) 172, 175, 582
Bme1390I CCNGG 1 cut(s) 624
BmeRI GACNNNNNGTC 1 cut(s) 143
BmgT120I GGNCC 5 cut(s) 599, 620, 625, 734, 880
BmiI GGNNCC 5 cut(s) 504, 543, 639, 861, 954
BmrFI CCNGG 1 cut(s) 624
BmsI GCATC 1 cut(s) 198
Bpu1102I GCTNAGC 2 cut(s) 72, 554
BpuEI CTTGAG 1 cut(s) 416
BpuMI CCSGG 1 cut(s) 624
BsaAI YACGTR 1 cut(s) 292
BsaJI CCNNGG 2 cut(s) 321, 507
BsaWI WCCGGW 1 cut(s) 645
BsaXI ACNNNNNCTCC 8 cut(s) 5, 35, 230, 260, 706, 736, 926, 956
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 634
Bse118I RCCGGY 1 cut(s) 645
Bse1I ACTGG 1 cut(s) 241
Bse21I CCTNAGG 1 cut(s) 738
Bse3DI GCAATG 2 cut(s) 794, 910
BseDI CCNNGG 2 cut(s) 321, 507
BseGI GGATG 3 cut(s) 111, 156, 238
BseLI CCNNNNNNNGG 2 cut(s) 41, 634
BseMI GCAATG 2 cut(s) 794, 910
BseMII CTCAG 3 cut(s) 86, 431, 752
BseNI ACTGG 1 cut(s) 241
BseRI GAGGAG 1 cut(s) 1094
BseX3I CGGCCG 1 cut(s) 324
BseYI CCCAGC 1 cut(s) 773
Bsh1236I CGCG 5 cut(s) 168, 176, 551, 583, 998
Bsh1285I CGRYCG 3 cut(s) 327, 646, 894
BshFI GGCC 7 cut(s) 326, 601, 622, 627, 736, 881, 970
BshNI GGYRCC 1 cut(s) 952
BshTI ACCGGT 1 cut(s) 645
BsiEI CGRYCG 3 cut(s) 327, 646, 894
BsiHKAI GWGCWC 1 cut(s) 1171
BsiSI CCGG 3 cut(s) 428, 623, 646
BslFI GGGAC 2 cut(s) 38, 799
BslI CCNNNNNNNGG 2 cut(s) 41, 634
BsmFI GGGAC 2 cut(s) 38, 799
BsnI GGCC 7 cut(s) 326, 601, 622, 627, 736, 881, 970
Bsp1286I GDGCHC 1 cut(s) 1171
Bsp143I GATC 5 cut(s) 375, 610, 637, 891, 1117
Bsp1720I GCTNAGC 2 cut(s) 72, 554
BspACI CCGC 9 cut(s) 36, 166, 171, 174, 581, 852, 863, 915, 1076
BspANI GGCC 7 cut(s) 326, 601, 622, 627, 736, 881, 970
BspCNI CTCAG 3 cut(s) 85, 432, 751
BspFNI CGCG 5 cut(s) 168, 176, 551, 583, 998
BspLI GGNNCC 5 cut(s) 504, 543, 639, 861, 954
BspPI GGATC 2 cut(s) 632, 645
BspT107I GGYRCC 1 cut(s) 952
BsrDI GCAATG 2 cut(s) 794, 910
BsrFI RCCGGY 1 cut(s) 645
BsrI ACTGG 1 cut(s) 241
BssAI RCCGGY 1 cut(s) 645
BssECI CCNNGG 2 cut(s) 321, 507
BssMI GATC 5 cut(s) 375, 610, 637, 891, 1117
BssT1I CCWWGG 1 cut(s) 507
Bst4CI ACNGT 2 cut(s) 145, 1115
Bst6I CTCTTC 2 cut(s) 449, 1151
BstBAI YACGTR 1 cut(s) 292
BstC8I GCNNGC 3 cut(s) 300, 560, 564
BstDEI CTNAG 7 cut(s) 72, 440, 554, 728, 738, 844, 1134
BstF5I GGATG 3 cut(s) 111, 156, 238
BstFNI CGCG 5 cut(s) 168, 176, 551, 583, 998
BstHHI GCGC 2 cut(s) 170, 553
BstKTI GATC 5 cut(s) 378, 613, 640, 894, 1120
BstMBI GATC 5 cut(s) 375, 610, 637, 891, 1117
BstMCI CGRYCG 3 cut(s) 327, 646, 894
BstMWI GCNNNNNNNGC 9 cut(s) 179, 428, 550, 559, 714, 840, 849, 887, 1196
BstNSI RCATGY 2 cut(s) 302, 361
BstSCI CCNGG 1 cut(s) 622
BstSFI CTRYAG 1 cut(s) 1048
BstUI CGCG 5 cut(s) 168, 176, 551, 583, 998
BstX2I RGATCY 1 cut(s) 637
BstYI RGATCY 1 cut(s) 637
BstZI CGGCCG 1 cut(s) 324
Bsu36I CCTNAGG 1 cut(s) 738
BsuRI GGCC 7 cut(s) 326, 601, 622, 627, 736, 881, 970
BtgZI GCGATG 1 cut(s) 235
BtsCI GGATG 3 cut(s) 111, 156, 238
BtsI GCAGTG 1 cut(s) 1035
BtsIMutI CAGTG 2 cut(s) 1035, 1169
Cac8I GCNNGC 3 cut(s) 300, 560, 564
CfoI GCGC 2 cut(s) 170, 553
Cfr10I RCCGGY 1 cut(s) 645
Cfr13I GGNCC 5 cut(s) 599, 620, 625, 734, 880
CseI GACGC 1 cut(s) 165
Csp6I GTAC 7 cut(s) 238, 366, 466, 496, 649, 823, 953
CspAI ACCGGT 1 cut(s) 645
CviAII CATG 9 cut(s) 89, 127, 299, 316, 358, 373, 718, 1121, 1147
CviQI GTAC 7 cut(s) 238, 366, 466, 496, 649, 823, 953
DdeI CTNAG 7 cut(s) 72, 440, 554, 728, 738, 844, 1134
DpnI GATC 5 cut(s) 377, 612, 639, 893, 1119
DpnII GATC 5 cut(s) 375, 610, 637, 891, 1117
DriI GACNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 2 cut(s) 324, 968
EagI CGGCCG 1 cut(s) 324
Eam1104I CTCTTC 2 cut(s) 449, 1151
Eam1105I GACNNNNNGTC 1 cut(s) 143
EarI CTCTTC 2 cut(s) 449, 1151
EciI GGCGGA 1 cut(s) 1091
EclXI CGGCCG 1 cut(s) 324
Eco130I CCWWGG 1 cut(s) 507
Eco52I CGGCCG 1 cut(s) 324
Eco81I CCTNAGG 1 cut(s) 738
EcoT14I CCWWGG 1 cut(s) 507
ErhI CCWWGG 1 cut(s) 507
FaeI CATG 9 cut(s) 92, 130, 302, 319, 361, 376, 721, 1124, 1150
FaqI GGGAC 2 cut(s) 38, 799
FatI CATG 9 cut(s) 88, 126, 298, 315, 357, 372, 717, 1120, 1146
FauI CCCGC 4 cut(s) 43, 173, 845, 908
FbaI TGATCA 1 cut(s) 1117
FblI GTMKAC 1 cut(s) 216
Fnu4HI GCNGC 3 cut(s) 171, 174, 581
FokI GGATG 3 cut(s) 98, 143, 245
Fsp4HI GCNGC 3 cut(s) 171, 174, 581
FspBI CTAG 4 cut(s) 50, 80, 305, 1202
GlaI GCGC 2 cut(s) 169, 552
GluI GCNGC 3 cut(s) 171, 174, 581
GsaI CCCAGC 1 cut(s) 777
HaeIII GGCC 7 cut(s) 326, 601, 622, 627, 736, 881, 970
HapII CCGG 3 cut(s) 428, 623, 646
HgaI GACGC 1 cut(s) 165
HhaI GCGC 2 cut(s) 170, 553
Hin1II CATG 9 cut(s) 92, 130, 302, 319, 361, 376, 721, 1124, 1150
Hin6I GCGC 2 cut(s) 168, 551
HinP1I GCGC 2 cut(s) 168, 551
HincII GTYRAC 2 cut(s) 85, 148
HindII GTYRAC 2 cut(s) 85, 148
HinfI GANTC 6 cut(s) 99, 329, 400, 461, 604, 874
HpaII CCGG 3 cut(s) 428, 623, 646
HphI GGTGA 6 cut(s) 115, 673, 754, 1127, 1138, 1150
Hpy166II GTNNAC 7 cut(s) 85, 148, 217, 355, 589, 803, 823
Hpy188I TCNGA 5 cut(s) 44, 441, 453, 714, 896
Hpy188III TCNNGA 2 cut(s) 608, 641
Hpy8I GTNNAC 7 cut(s) 85, 148, 217, 355, 589, 803, 823
Hpy99I CGWCG 3 cut(s) 65, 383, 436
HpyAV CCTTC 1 cut(s) 1199
HpyCH4III ACNGT 2 cut(s) 145, 1115
HpyCH4IV ACGT 5 cut(s) 291, 368, 381, 434, 527
HpyCH4V TGCA 3 cut(s) 227, 344, 1190
HpyF10VI GCNNNNNNNGC 9 cut(s) 179, 428, 550, 559, 714, 840, 849, 887, 1196
HpyF3I CTNAG 7 cut(s) 72, 440, 554, 728, 738, 844, 1134
HpySE526I ACGT 5 cut(s) 291, 368, 381, 434, 527
Hsp92II CATG 9 cut(s) 92, 130, 302, 319, 361, 376, 721, 1124, 1150
HspAI GCGC 2 cut(s) 168, 551
KpnI GGTACC 1 cut(s) 956
Ksp22I TGATCA 1 cut(s) 1117
Kzo9I GATC 5 cut(s) 375, 610, 637, 891, 1117
LmnI GCTCC 4 cut(s) 81, 541, 714, 1166
LweI GCATC 1 cut(s) 198
MaeI CTAG 4 cut(s) 50, 80, 305, 1202
MaeII ACGT 5 cut(s) 291, 368, 381, 434, 527
MalI GATC 5 cut(s) 377, 612, 639, 893, 1119
MboI GATC 5 cut(s) 375, 610, 637, 891, 1117
MboII GAAGA 3 cut(s) 466, 883, 1168
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 1 cut(s) 1171
MluCI AATT 7 cut(s) 8, 151, 536, 836, 1016, 1063, 1212
MluI ACGCGT 1 cut(s) 996
MlyI GAGTC 1 cut(s) 338
MseI TTAA 3 cut(s) 615, 1011, 1211
MslI CAYNNNNRTG 1 cut(s) 125
MspI CCGG 3 cut(s) 428, 623, 646
MspR9I CCNGG 1 cut(s) 624
MvnI CGCG 5 cut(s) 168, 176, 551, 583, 998
MwoI GCNNNNNNNGC 9 cut(s) 179, 428, 550, 559, 714, 840, 849, 887, 1196
NciI CCSGG 1 cut(s) 624
NdeII GATC 5 cut(s) 375, 610, 637, 891, 1117
NlaIII CATG 9 cut(s) 92, 130, 302, 319, 361, 376, 721, 1124, 1150
NlaIV GGNNCC 5 cut(s) 504, 543, 639, 861, 954
NmeAIII GCCGAG 2 cut(s) 302, 352
NspI RCATGY 2 cut(s) 302, 361
PaeI GCATGC 1 cut(s) 302
PciI ACATGT 1 cut(s) 357
PcsI WCGNNNNNNNCGW 1 cut(s) 387
PfeI GAWTC 5 cut(s) 99, 400, 461, 604, 874
PinAI ACCGGT 1 cut(s) 645
PkrI GCNGC 3 cut(s) 172, 175, 582
Ple19I CGATCG 1 cut(s) 894
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
Ppu21I YACGTR 1 cut(s) 292
PscI ACATGT 1 cut(s) 357
PspFI CCCAGC 1 cut(s) 773
PspN4I GGNNCC 5 cut(s) 504, 543, 639, 861, 954
PspPI GGNCC 5 cut(s) 599, 620, 625, 734, 880
PsuI RGATCY 1 cut(s) 637
PvuI CGATCG 1 cut(s) 894
RsaI GTAC 7 cut(s) 239, 367, 467, 497, 650, 824, 954
RsaNI GTAC 7 cut(s) 238, 366, 466, 496, 649, 823, 953
RseI CAYNNNNRTG 1 cut(s) 125
SaqAI TTAA 3 cut(s) 615, 1011, 1211
SatI GCNGC 3 cut(s) 171, 174, 581
Sau3AI GATC 5 cut(s) 375, 610, 637, 891, 1117
Sau96I GGNCC 5 cut(s) 599, 620, 625, 734, 880
SchI GAGTC 1 cut(s) 338
ScrFI CCNGG 1 cut(s) 624
SduI GDGCHC 1 cut(s) 1171
SfaNI GCATC 1 cut(s) 198
SfcI CTRYAG 1 cut(s) 1048
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
SphI GCATGC 1 cut(s) 302
Sse9I AATT 7 cut(s) 8, 151, 536, 836, 1016, 1063, 1212
SsiI CCGC 9 cut(s) 36, 166, 171, 174, 581, 852, 863, 915, 1076
SspMI CTAG 4 cut(s) 50, 80, 305, 1202
StyD4I CCNGG 1 cut(s) 622
StyI CCWWGG 1 cut(s) 507
TaaI ACNGT 2 cut(s) 145, 1115
TaiI ACGT 5 cut(s) 294, 371, 384, 437, 530
TaqI TCGA 3 cut(s) 63, 97, 378
TasI AATT 7 cut(s) 8, 151, 536, 836, 1016, 1063, 1212
TauI GCSGC 3 cut(s) 173, 176, 583
TfiI GAWTC 5 cut(s) 99, 400, 461, 604, 874
Tru1I TTAA 3 cut(s) 615, 1011, 1211
Tru9I TTAA 3 cut(s) 615, 1011, 1211
TscAI CASTG 2 cut(s) 1035, 1176
TspDTI ATGAA 5 cut(s) 13, 17, 436, 892, 1007
TspRI CASTG 2 cut(s) 1035, 1176
XceI RCATGY 2 cut(s) 302, 361
XmiI GTMKAC 1 cut(s) 216
XspI CTAG 4 cut(s) 50, 80, 305, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.