Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0003110

Physical Location & Seq

Genomic Coordinates Forward (+)

31675095 .. 31679483

Gene Structure 4389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1176700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGAAGGAAAGCTCAGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCTTGGATGAGCAGCTGGAAAGGCATCTCAACAGGGTCTTGACTTTGGAGAAGAACAAGATCATGAGAGACCCTGAAACCAATTCCAACAGCATCCACCTCACCACTACCTCCAACTCCAATTCAACCGCTACCACAACCCCCACGACCACCACCTCCACTTCCTCCATGACCCTCTCCATCCCCAGGCGCCACCGCCAGGAGTGGGAGATCGACCCCTCCAAGCTCCTCATCAAGTCTGTCATTGCTCGTGGCACCTTCGGCACCGTCCACCGTGGCATCTACGACGGTCAAGATGTCGCCGTTAAATTGCTTGACTGGGGTGAAGAGGGTCACAGGACAGACTCCGAGATTGCTTCTCTAAGGGCAGCTTTTACTCAAGAAGTTGCTGTCTGGCATAAACTAGATCATCCTAATGTTACTAAGTTTATTGGGGCAACAATGGGTTCATCAGATCTACAAATACAGACAGAAAATGGTCAAATTGGCATGCCAACAAATATCTGTTGTGTCGTTGTAGAATATCTTCCTGGGGGTGCTCTAAAATCGTACCTCATAAAGAATAGGAGAAGGAAGTTAGCTTTTAAAGTCGTTGTCCAGCTGGCACTAGATCTTGCTAGAGGGTTGAGCTACTTACACTCACAGAAGATTGTCCACAGAGATGTAAAGACAGAGAACATGCTTCTGGACAAGACTCGTGCGGTCAAGATTGCTGATTTTGGTGTTGCTCGTGTTGAAGCTTCAAATCCCAATGACATGACTGGGGAGACTGGCACACTAGGTTACATGGCTCCTGAGGTCCTCAATGGCAACCCGTATAACAGGAAATGTGATGTGTACAGTTTCGGCATCTGTTTATGGGAAATATATTGCTGTGATATGCCATATCCTGACCTTAGTTTCTCGGAAGTGACTTCAGCTGTGGTTCGCCAGAATTTGAGACCGGAGATACCAAGATGTTGTCCAAGTGCGCTTGCAAACGTAATGAAGCGATGCTGGGATGCGAATCCAGACAAGCGGCCTGAGATGGATGAGGTAGTCACAATGTTGGAGGCGATCGACACATCGAAAGGCGGAGGTATGATCCCTCAAGATCAGTCTCAGGGCTGTCTTTGCTTTCGAAAGAAAAGAGGACCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

397

Amino Acids

44.2

Weight (kDa)

7.55

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	95 - 367	2.1e-61	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	97 - 364	3.8e-49	Protein kinase domain
Kinase-like	PF14531	204 - 313	1.7e-06	Kinase-like
Pkinase_fungal	PF17667	224 - 299	7.5e-06	Fungal protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50000 AT5G50000
fragaria_vesca	FvH4_4g34550 FvH4_5g05170 FvH4_7g27090 FvH4_7g27110
malus_domestica	MD06G1175900.v1.1 MD06G1176700.v1.1 MD14G1182800.v1.1 MD14G1182900.v1.1 MD16G1091900.v1.1 MD17G1183600.v1.1
prunus_persica	Prupe.1G254400_v2.0.a1 Prupe.1G254500_v2.0.a1 Prupe.5G175400_v2.0.a1 Prupe.8G000900_v2.0.a1
pyrus_communis	pycom06g15690 pycom14g15180 pycom16g07840
rosa_chinensis	RchiOBHm_Chr4g0443931 RchiOBHm_Chr7g0193791
rosa_laevigata	RLG00000004245 RLG00000005876
rosa_multiflora	Rmu_sc0001436.1_g000027 Rmu_sc0011390.1_g000005
rosa_roxburghii	Rroxscaffold_3G00261830
rosa_rugosa	Rorug04G0348300 Rorug07G0011900
rosa_samantha	Rh4AG408900 Rh4BG420000 Rh4CG434000 Rh4DG415000 Rh7BG138900 Rh7CG142500 Rh7DG140100
rosa_wichuraiana	Rw4G035120 Rw7G011810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	240, 305, 314
AciI	CCGC	5 cut(s)	180, 247, 752, 1069, 1125
AclWI	GGATC	1 cut(s)	1129
AcsI	RAATTY	1 cut(s)	985
AcuI	CTGAAG	2 cut(s)	68, 951
AcyI	GRCGYC	1 cut(s)	241
AfaI	GTAC	2 cut(s)	602, 890
AfiI	CCNNNNNNNGG	3 cut(s)	237, 250, 256
AgsI	TTSAA	3 cut(s)	177, 788, 795
AjnI	CCWGG	3 cut(s)	236, 249, 580
Alw21I	GWGCWC	1 cut(s)	592
Alw26I	GTCTC	4 cut(s)	114, 812, 985, 1155
AlwI	GGATC	1 cut(s)	1129
AoxI	GGCC	1 cut(s)	1070
ApeKI	GCWGC	2 cut(s)	64, 419
ApoI	RAATTY	1 cut(s)	985
Asp700I	GAANNNNTTC	1 cut(s)	576
AspLEI	GCGC	2 cut(s)	243, 1024
AspS9I	GGNCC	2 cut(s)	850, 1184
AsuHPI	GGTGA	2 cut(s)	145, 386
AsuII	TTCGAA	1 cut(s)	1171
AvaII	GGWCC	2 cut(s)	850, 1184
AxyI	CCTNAGG	1 cut(s)	846
BanI	GGYRCC	3 cut(s)	240, 305, 314
BarI	GAAGNNNNNNTAC	2 cut(s)	561, 593
BauI	CACGAG	3 cut(s)	300, 747, 780
Bbv12I	GWGCWC	1 cut(s)	592
BbvI	GCAGC	2 cut(s)	76, 431
BccI	CCATC	3 cut(s)	11, 239, 1072
BceAI	ACGGC	1 cut(s)	338
BciT130I	CCWGG	3 cut(s)	238, 251, 582
BcoDI	GTCTC	4 cut(s)	114, 812, 985, 1155
BfaI	CTAG	4 cut(s)	455, 659, 669, 830
BfoI	RGCGCY	1 cut(s)	244
BglII	AGATCT	2 cut(s)	505, 661
BisI	GCNGC	3 cut(s)	65, 420, 1070
BlsI	GCNGC	3 cut(s)	66, 421, 1071
Bme1390I	CCNGG	3 cut(s)	238, 251, 582
Bme18I	GGWCC	2 cut(s)	850, 1184
BmgT120I	GGNCC	2 cut(s)	850, 1184
BmiI	GGNNCC	4 cut(s)	242, 307, 316, 843
BmrFI	CCNGG	3 cut(s)	238, 251, 582
BmrI	ACTGGG	2 cut(s)	379, 822
BmsI	GCATC	6 cut(s)	85, 153, 339, 909, 1034, 1042
BmuI	ACTGGG	2 cut(s)	379, 822
Bpu14I	TTCGAA	1 cut(s)	1171
BpuEI	CTTGAG	2 cut(s)	414, 1125
BsaBI	GATNNNNATC	1 cut(s)	1056
BsaHI	GRCGYC	1 cut(s)	241
BsaI	GGTCTC	2 cut(s)	114, 985
BsaJI	CCNNGG	3 cut(s)	236, 325, 581
BsaWI	WCCGGW	1 cut(s)	994
Bsc4I	CCNNNNNNNGG	3 cut(s)	237, 250, 256
Bse1I	ACTGG	3 cut(s)	374, 817, 826
Bse21I	CCTNAGG	1 cut(s)	846
Bse3DI	GCAATG	1 cut(s)	294
Bse8I	GATNNNNATC	1 cut(s)	1056
BseBI	CCWGG	3 cut(s)	238, 251, 582
BseDI	CCNNGG	3 cut(s)	236, 325, 581
BseGI	GGATG	6 cut(s)	64, 144, 231, 460, 1057, 1087
BseJI	GATNNNNATC	1 cut(s)	1056
BseLI	CCNNNNNNNGG	3 cut(s)	237, 250, 256
BseMI	GCAATG	1 cut(s)	294
BseMII	CTCAG	4 cut(s)	27, 837, 1065, 1166
BseNI	ACTGG	3 cut(s)	374, 817, 826
BseRI	GAGGAG	1 cut(s)	269
BseXI	GCAGC	2 cut(s)	76, 431
BseYI	CCCAGC	1 cut(s)	1047
Bsh1285I	CGRYCG	1 cut(s)	1110
BshFI	GGCC	1 cut(s)	1072
BshNI	GGYRCC	3 cut(s)	240, 305, 314
BsiEI	CGRYCG	1 cut(s)	1110
BsiHKAI	GWGCWC	1 cut(s)	592
BsiSI	CCGG	1 cut(s)	995
BslI	CCNNNNNNNGG	3 cut(s)	237, 250, 256
BsmAI	GTCTC	4 cut(s)	114, 812, 985, 1155
BsnI	GGCC	1 cut(s)	1072
Bso31I	GGTCTC	2 cut(s)	114, 985
Bsp119I	TTCGAA	1 cut(s)	1171
Bsp1286I	GDGCHC	1 cut(s)	592
Bsp1407I	TGTACA	1 cut(s)	888
BspACI	CCGC	5 cut(s)	180, 247, 752, 1069, 1125
BspANI	GGCC	1 cut(s)	1072
BspCNI	CTCAG	4 cut(s)	26, 838, 1066, 1165
BspHI	TCATGA	1 cut(s)	114
BspLI	GGNNCC	4 cut(s)	242, 307, 316, 843
BspPI	GGATC	1 cut(s)	1129
BspQI	GCTCTTC	1 cut(s)	44
BspT104I	TTCGAA	1 cut(s)	1171
BspT107I	GGYRCC	3 cut(s)	240, 305, 314
BspTNI	GGTCTC	2 cut(s)	114, 985
BsrDI	GCAATG	1 cut(s)	294
BsrGI	TGTACA	1 cut(s)	888
BsrI	ACTGG	3 cut(s)	374, 817, 826
BssECI	CCNNGG	3 cut(s)	236, 325, 581
BssNI	GRCGYC	1 cut(s)	241
BssSI	CACGAG	3 cut(s)	300, 747, 780
Bst2BI	CACGAG	3 cut(s)	300, 747, 780
Bst2UI	CCWGG	3 cut(s)	238, 251, 582
Bst4CI	ACNGT	5 cut(s)	319, 326, 341, 893, 1188
Bst6I	CTCTTC	2 cut(s)	44, 372
BstACI	GRCGYC	1 cut(s)	241
BstAUI	TGTACA	1 cut(s)	888
BstBI	TTCGAA	1 cut(s)	1171
BstC8I	GCNNGC	3 cut(s)	542, 654, 1026
BstDEI	CTNAG	7 cut(s)	13, 413, 474, 846, 947, 1074, 1152
BstDSI	CCRYGG	1 cut(s)	325
BstF5I	GGATG	6 cut(s)	64, 144, 231, 460, 1057, 1087
BstH2I	RGCGCY	1 cut(s)	244
BstHHI	GCGC	2 cut(s)	243, 1024
BstMAI	GTCTC	4 cut(s)	114, 812, 985, 1155
BstMCI	CGRYCG	1 cut(s)	1110
BstMWI	GCNNNNNNNGC	3 cut(s)	73, 312, 1164
BstNI	CCWGG	3 cut(s)	238, 251, 582
BstNSI	RCATGY	2 cut(s)	544, 733
BstSCI	CCNGG	3 cut(s)	236, 249, 580
BstV1I	GCAGC	2 cut(s)	76, 431
BstX2I	RGATCY	2 cut(s)	505, 661
BstYI	RGATCY	2 cut(s)	505, 661
Bsu36I	CCTNAGG	1 cut(s)	846
BsuRI	GGCC	1 cut(s)	1072
BtgI	CCRYGG	1 cut(s)	325
BtgZI	GCGATG	1 cut(s)	1057
BtsCI	GGATG	6 cut(s)	64, 144, 231, 460, 1057, 1087
Cac8I	GCNNGC	3 cut(s)	542, 654, 1026
CciI	TCATGA	1 cut(s)	114
CfoI	GCGC	2 cut(s)	243, 1024
Cfr13I	GGNCC	2 cut(s)	850, 1184
Csp6I	GTAC	2 cut(s)	601, 889
CviAII	CATG	6 cut(s)	115, 220, 541, 730, 808, 838
CviQI	GTAC	2 cut(s)	601, 889
DdeI	CTNAG	7 cut(s)	13, 413, 474, 846, 947, 1074, 1152
DinI	GGCGCC	1 cut(s)	242
DraI	TTTAAA	1 cut(s)	637
Eam1104I	CTCTTC	2 cut(s)	44, 372
EarI	CTCTTC	2 cut(s)	44, 372
EciI	GGCGGA	1 cut(s)	1140
Eco31I	GGTCTC	2 cut(s)	114, 985
Eco47I	GGWCC	2 cut(s)	850, 1184
Eco57I	CTGAAG	2 cut(s)	68, 951
Eco81I	CCTNAGG	1 cut(s)	846
EcoO109I	RGGNCCY	1 cut(s)	850
EcoRII	CCWGG	3 cut(s)	236, 249, 580
EgeI	GGCGCC	1 cut(s)	242
EheI	GGCGCC	1 cut(s)	242
FaeI	CATG	6 cut(s)	118, 223, 544, 733, 811, 841
FalI	AAGNNNNNCTT	2 cut(s)	406, 438
FatI	CATG	6 cut(s)	114, 219, 540, 729, 807, 837
Fnu4HI	GCNGC	3 cut(s)	65, 420, 1070
FokI	GGATG	6 cut(s)	71, 131, 218, 447, 1064, 1094
Fsp4HI	GCNGC	3 cut(s)	65, 420, 1070
FspBI	CTAG	4 cut(s)	455, 659, 669, 830
GlaI	GCGC	2 cut(s)	242, 1023
GluI	GCNGC	3 cut(s)	65, 420, 1070
GsaI	CCCAGC	1 cut(s)	1051
HaeII	RGCGCY	1 cut(s)	244
HaeIII	GGCC	1 cut(s)	1072
HapII	CCGG	1 cut(s)	995
HhaI	GCGC	2 cut(s)	243, 1024
Hin1I	GRCGYC	1 cut(s)	241
Hin1II	CATG	6 cut(s)	118, 223, 544, 733, 811, 841
Hin6I	GCGC	2 cut(s)	241, 1022
HinP1I	GCGC	2 cut(s)	241, 1022
HindIII	AAGCTT	1 cut(s)	789
HinfI	GANTC	3 cut(s)	395, 745, 1057
HpaII	CCGG	1 cut(s)	995
HphI	GGTGA	2 cut(s)	145, 386
Hpy166II	GTNNAC	3 cut(s)	322, 706, 889
Hpy188I	TCNGA	6 cut(s)	16, 39, 48, 400, 505, 958
Hpy8I	GTNNAC	3 cut(s)	322, 706, 889
Hpy99I	CGWCG	1 cut(s)	341
HpyAV	CCTTC	2 cut(s)	319, 615
HpyCH4III	ACNGT	5 cut(s)	319, 326, 341, 893, 1188
HpyCH4IV	ACGT	1 cut(s)	1032
HpyCH4V	TGCA	1 cut(s)	1028
HpyF10VI	GCNNNNNNNGC	3 cut(s)	73, 312, 1164
HpyF3I	CTNAG	7 cut(s)	13, 413, 474, 846, 947, 1074, 1152
HpySE526I	ACGT	1 cut(s)	1032
Hsp92I	GRCGYC	1 cut(s)	241
Hsp92II	CATG	6 cut(s)	118, 223, 544, 733, 811, 841
HspAI	GCGC	2 cut(s)	241, 1022
KasI	GGCGCC	1 cut(s)	240
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	2 cut(s)	282, 847
Lsp1109I	GCAGC	2 cut(s)	76, 431
LweI	GCATC	6 cut(s)	85, 153, 339, 909, 1034, 1042
MaeI	CTAG	4 cut(s)	455, 659, 669, 830
MaeII	ACGT	1 cut(s)	1032
MaeIII	GTNAC	5 cut(s)	383, 469, 833, 961, 1090
MboII	GAAGA	5 cut(s)	61, 115, 389, 569, 709
MflI	RGATCY	2 cut(s)	505, 661
MhlI	GDGCHC	1 cut(s)	592
MluCI	AATT	5 cut(s)	133, 172, 359, 534, 985
Mly113I	GGCGCC	1 cut(s)	241
MlyI	GAGTC	2 cut(s)	389, 739
MmeI	TCCRAC	3 cut(s)	162, 189, 1080
MroXI	GAANNNNTTC	1 cut(s)	576
MseI	TTAA	2 cut(s)	357, 636
MslI	CAYNNNNRTG	2 cut(s)	465, 711
MspA1I	CMGCKG	3 cut(s)	67, 652, 971
MspI	CCGG	1 cut(s)	995
MspR9I	CCNGG	3 cut(s)	238, 251, 582
MvaI	CCWGG	3 cut(s)	238, 251, 582
MwoI	GCNNNNNNNGC	3 cut(s)	73, 312, 1164
NarI	GGCGCC	1 cut(s)	241
NlaIII	CATG	6 cut(s)	118, 223, 544, 733, 811, 841
NlaIV	GGNNCC	4 cut(s)	242, 307, 316, 843
NmuCI	GTSAC	3 cut(s)	383, 961, 1090
NspI	RCATGY	2 cut(s)	544, 733
NspV	TTCGAA	1 cut(s)	1171
PaeI	GCATGC	1 cut(s)	544
PagI	TCATGA	1 cut(s)	114
PciSI	GCTCTTC	1 cut(s)	44
PdmI	GAANNNNTTC	1 cut(s)	576
PfeI	GAWTC	1 cut(s)	1057
PkrI	GCNGC	3 cut(s)	66, 421, 1071
Ple19I	CGATCG	1 cut(s)	1110
PleI	GAGTC	2 cut(s)	389, 739
PluTI	GGCGCC	1 cut(s)	244
PpsI	GAGTC	2 cut(s)	389, 739
PpuMI	RGGWCCY	1 cut(s)	850
Psp5II	RGGWCCY	1 cut(s)	850
Psp6I	CCWGG	3 cut(s)	236, 249, 580
PspFI	CCCAGC	1 cut(s)	1047
PspGI	CCWGG	3 cut(s)	236, 249, 580
PspN4I	GGNNCC	4 cut(s)	242, 307, 316, 843
PspPI	GGNCC	2 cut(s)	850, 1184
PspPPI	RGGWCCY	1 cut(s)	850
PsuI	RGATCY	2 cut(s)	505, 661
PvuI	CGATCG	1 cut(s)	1110
PvuII	CAGCTG	3 cut(s)	67, 652, 971
RsaI	GTAC	2 cut(s)	602, 890
RsaNI	GTAC	2 cut(s)	601, 889
RseI	CAYNNNNRTG	2 cut(s)	465, 711
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	2 cut(s)	357, 636
SatI	GCNGC	3 cut(s)	65, 420, 1070
Sau96I	GGNCC	2 cut(s)	850, 1184
SchI	GAGTC	2 cut(s)	389, 739
ScrFI	CCNGG	3 cut(s)	238, 251, 582
SduI	GDGCHC	1 cut(s)	592
SfaNI	GCATC	6 cut(s)	85, 153, 339, 909, 1034, 1042
SfoI	GGCGCC	1 cut(s)	242
SfuI	TTCGAA	1 cut(s)	1171
SinI	GGWCC	2 cut(s)	850, 1184
SmiMI	CAYNNNNRTG	2 cut(s)	465, 711
SmlI	CTYRAG	2 cut(s)	429, 1140
SmoI	CTYRAG	2 cut(s)	429, 1140
SphI	GCATGC	1 cut(s)	544
Sse9I	AATT	5 cut(s)	133, 172, 359, 534, 985
SsiI	CCGC	5 cut(s)	180, 247, 752, 1069, 1125
SspDI	GGCGCC	1 cut(s)	240
SspMI	CTAG	4 cut(s)	455, 659, 669, 830
StyD4I	CCNGG	3 cut(s)	236, 249, 580
TaaI	ACNGT	5 cut(s)	319, 326, 341, 893, 1188
TaiI	ACGT	1 cut(s)	1035
TaqI	TCGA	4 cut(s)	264, 1110, 1118, 1171
TasI	AATT	5 cut(s)	133, 172, 359, 534, 985
TatI	WGTACW	1 cut(s)	888
TauI	GCSGC	1 cut(s)	1072
TfiI	GAWTC	1 cut(s)	1057
Tru1I	TTAA	2 cut(s)	357, 636
Tru9I	TTAA	2 cut(s)	357, 636
TseFI	GTSAC	3 cut(s)	383, 961, 1090
TseI	GCWGC	2 cut(s)	64, 419
Tsp45I	GTSAC	3 cut(s)	383, 961, 1090
TspDTI	ATGAA	3 cut(s)	17, 489, 1052
VpaK11BI	GGWCC	2 cut(s)	850, 1184
XapI	RAATTY	1 cut(s)	985
XceI	RCATGY	2 cut(s)	544, 733
XmnI	GAANNNNTTC	1 cut(s)	576
XspI	CTAG	4 cut(s)	455, 659, 669, 830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.