Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003110

Physical Location & Seq

Genomic Coordinates Forward (+)

14913340 .. 14917376

Gene Structure 4037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G175400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGAAGGAGAGCAGTGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCTTGGATGAGCAGCTGGAGAGGCACCTCAACAGGGTCTTGACTTTGGAGAAGAGCAAGATCATGAGAGACCCAGAAACCAACAGCAACAGCATCAACCTCTCCACCTCCAATTCCACCACCTCCACTTCTGCCATGACCCTCTCCATTCCCAAGCGCCACAGGCAGGACTGGGAGATCGACCCCGCCAAGCTCATCATCAAATCCGTCATTGCACGTGGCACCTTCGGCACCGTCCACCGTGGCATGTACGACGGTCAGGATGTCGCCGTTAAATTACTTGACTGGGGTGAAGAGGGTCACCGGACAGAAGCTGAGATTTCTTCTCTAAGGGCAGCTTTTACTCAAGAAGTTGCTGTCTGGCATAAACTAGATCATCCTAATGTTACTAAGTTTATAGGGGCGACAATGGGTTCATCCGAACTACAAATACAGACTGAAAATGGTCAAATTGGCATGCCGAGTAATATCTGTTGTGTCGTCGTGGAATATCTTCCTGGGGGTGCTCTGAAATCGTACCTCATTAAGAATAGGAGAAAGAAGTTGGCTTTTAAGGTCGTTGTCCAGCTGGCACTAGATCTTGCTAGAGGGTTGAGCTACCTACACTCACAGAAGATTGTTCACAGAGATGTAAAGACAGAGAACATGCTGCTGGATAAGACACGTGTAGTCAAGATTGCAGATTTTGGGGTTGCTCGAGTTGAAGCTTCAAATCCTAATGACATGACTGGGGAGACTGGCACACTTGGTTACATGGCTCCTGAGGTTCTCAATGGCAACCCATATAATAGGAAATGTGATGTGTACAGCTTTGGCATCTGTCTATGGGAGATATATTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCGGAAGTGACTTCAGCTGTGGTTCGCCAGAATTTGAGACCAGAGATACCAAGATGTTGTCCAAGTTCCCTAGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCAGACAAGCGGCCGGAGATGGATGAGGTAGTCTCAATGTTGGAGGCTATCGACACGTCGAAAGGTGGAGGTATGATCCCTCAAGATCAGTCTCAGGGTTGTTTTTGCTTTCGCAAGATGAGAGGGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

386

Amino Acids

43.05

Weight (kDa)

7.06

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50000 AT5G50000
fragaria_vesca	FvH4_4g34550 FvH4_5g05170 FvH4_7g27090 FvH4_7g27110
malus_domestica	MD06G1175900.v1.1 MD06G1176700.v1.1 MD14G1182800.v1.1 MD14G1182900.v1.1 MD16G1091900.v1.1 MD17G1183600.v1.1
prunus_persica	Prupe.1G254400_v2.0.a1 Prupe.1G254500_v2.0.a1 Prupe.5G175400_v2.0.a1 Prupe.8G000900_v2.0.a1
pyrus_communis	pycom06g15690 pycom14g15180 pycom16g07840
rosa_chinensis	RchiOBHm_Chr4g0443931 RchiOBHm_Chr7g0193791
rosa_laevigata	RLG00000004245 RLG00000005876
rosa_multiflora	Rmu_sc0001436.1_g000027 Rmu_sc0011390.1_g000005
rosa_roxburghii	Rroxscaffold_3G00261830
rosa_rugosa	Rorug04G0348300 Rorug07G0011900
rosa_samantha	Rh4AG408900 Rh4BG420000 Rh4CG434000 Rh4DG415000 Rh7BG138900 Rh7CG142500 Rh7DG140100
rosa_wichuraiana	Rw4G035120 Rw7G011810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	75, 272, 281
AciI	CCGC	2 cut(s)	237, 1036
AclWI	GGATC	1 cut(s)	1096
AcoI	YGGCCR	1 cut(s)	1037
AcsI	RAATTY	1 cut(s)	952
AcuI	CTGAAG	2 cut(s)	68, 918
AcvI	CACGTG	2 cut(s)	269, 716
AfaI	GTAC	3 cut(s)	302, 569, 857
AfiI	CCNNNNNNNGG	2 cut(s)	85, 217
AflIII	ACRYGT	3 cut(s)	713, 715, 1080
AgsI	TTSAA	2 cut(s)	755, 762
AjiI	CACGTC	1 cut(s)	1083
AjnI	CCWGG	1 cut(s)	547
Alw21I	GWGCWC	1 cut(s)	559
Alw26I	GTCTC	5 cut(s)	114, 779, 952, 1063, 1122
AlwI	GGATC	1 cut(s)	1096
AlwNI	CAGNNNCTG	1 cut(s)	365
Ama87I	CYCGRG	1 cut(s)	747
AoxI	GGCC	2 cut(s)	1037, 1151
ApeKI	GCWGC	3 cut(s)	64, 386, 700
ApoI	RAATTY	1 cut(s)	952
Asp700I	GAANNNNTTC	1 cut(s)	543
AspLEI	GCGC	1 cut(s)	210
AspS9I	GGNCC	1 cut(s)	1151
AsuHPI	GGTGA	2 cut(s)	344, 353
AvaI	CYCGRG	1 cut(s)	747
AxyI	CCTNAGG	1 cut(s)	813
BanI	GGYRCC	3 cut(s)	75, 272, 281
BbrPI	CACGTG	2 cut(s)	269, 716
Bbv12I	GWGCWC	1 cut(s)	559
BbvI	GCAGC	3 cut(s)	76, 398, 687
BccI	CCATC	2 cut(s)	11, 1039
BceAI	ACGGC	1 cut(s)	305
BciT130I	CCWGG	1 cut(s)	549
BcoDI	GTCTC	5 cut(s)	114, 779, 952, 1063, 1122
BfaI	CTAG	4 cut(s)	422, 626, 636, 992
BfoI	RGCGCY	1 cut(s)	211
BglII	AGATCT	1 cut(s)	628
BisI	GCNGC	4 cut(s)	65, 387, 701, 1037
BlsI	GCNGC	4 cut(s)	66, 388, 702, 1038
Bme1390I	CCNGG	1 cut(s)	549
BmeT110I	CYCGRG	1 cut(s)	747
BmgBI	CACGTC	1 cut(s)	1083
BmgT120I	GGNCC	1 cut(s)	1151
BmiI	GGNNCC	4 cut(s)	77, 274, 283, 810
BmrFI	CCNGG	1 cut(s)	549
BmrI	ACTGGG	3 cut(s)	232, 346, 789
BmsI	GCATC	4 cut(s)	153, 876, 1001, 1009
BmuI	ACTGGG	3 cut(s)	232, 346, 789
BplI	GAGNNNNNCTC	2 cut(s)	1043, 1075
BpmI	CTGGAG	1 cut(s)	89
Bpu10I	CCTNAGC	1 cut(s)	914
BpuEI	CTTGAG	2 cut(s)	381, 1092
BsaAI	YACGTR	2 cut(s)	269, 716
BsaI	GGTCTC	2 cut(s)	114, 952
BsaJI	CCNNGG	2 cut(s)	292, 548
BsaWI	WCCGGW	1 cut(s)	354
Bsc4I	CCNNNNNNNGG	2 cut(s)	85, 217
Bse1I	ACTGG	4 cut(s)	227, 341, 784, 793
Bse21I	CCTNAGG	1 cut(s)	813
Bse3DI	GCAATG	1 cut(s)	261
BseBI	CCWGG	1 cut(s)	549
BseDI	CCNNGG	2 cut(s)	292, 548
BseGI	GGATG	6 cut(s)	64, 319, 427, 467, 1024, 1054
BseLI	CCNNNNNNNGG	2 cut(s)	85, 217
BseMI	GCAATG	1 cut(s)	261
BseMII	CTCAG	3 cut(s)	357, 804, 1133
BseNI	ACTGG	4 cut(s)	227, 341, 784, 793
BseX3I	CGGCCG	1 cut(s)	1037
BseXI	GCAGC	3 cut(s)	76, 398, 687
BseYI	CCCAGC	1 cut(s)	1014
Bsh1285I	CGRYCG	1 cut(s)	1040
BshFI	GGCC	2 cut(s)	1039, 1153
BshNI	GGYRCC	3 cut(s)	75, 272, 281
BsiEI	CGRYCG	1 cut(s)	1040
BsiHKAI	GWGCWC	1 cut(s)	559
BsiHKCI	CYCGRG	1 cut(s)	747
BsiSI	CCGG	2 cut(s)	355, 1040
BslI	CCNNNNNNNGG	2 cut(s)	85, 217
BsmAI	GTCTC	5 cut(s)	114, 779, 952, 1063, 1122
BsnI	GGCC	2 cut(s)	1039, 1153
Bso31I	GGTCTC	2 cut(s)	114, 952
BsoBI	CYCGRG	1 cut(s)	747
Bsp1286I	GDGCHC	1 cut(s)	559
Bsp1407I	TGTACA	1 cut(s)	855
Bsp143I	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
BspACI	CCGC	2 cut(s)	237, 1036
BspANI	GGCC	2 cut(s)	1039, 1153
BspCNI	CTCAG	3 cut(s)	358, 805, 1132
BspHI	TCATGA	1 cut(s)	114
BspLI	GGNNCC	4 cut(s)	77, 274, 283, 810
BspPI	GGATC	1 cut(s)	1096
BspQI	GCTCTTC	2 cut(s)	44, 98
BspT107I	GGYRCC	3 cut(s)	75, 272, 281
BspTNI	GGTCTC	2 cut(s)	114, 952
BsrDI	GCAATG	1 cut(s)	261
BsrGI	TGTACA	1 cut(s)	855
BsrI	ACTGG	4 cut(s)	227, 341, 784, 793
BssECI	CCNNGG	2 cut(s)	292, 548
BssMI	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
Bst2UI	CCWGG	1 cut(s)	549
Bst4CI	ACNGT	3 cut(s)	286, 293, 308
Bst6I	CTCTTC	3 cut(s)	44, 98, 339
BstAUI	TGTACA	1 cut(s)	855
BstBAI	YACGTR	2 cut(s)	269, 716
BstC8I	GCNNGC	2 cut(s)	509, 621
BstDEI	CTNAG	6 cut(s)	366, 380, 441, 813, 914, 1119
BstDSI	CCRYGG	1 cut(s)	292
BstEII	GGTNACC	1 cut(s)	350
BstF5I	GGATG	6 cut(s)	64, 319, 427, 467, 1024, 1054
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	1 cut(s)	210
BstKTI	GATC	8 cut(s)	37, 46, 114, 231, 427, 631, 1104, 1114
BstMAI	GTCTC	5 cut(s)	114, 779, 952, 1063, 1122
BstMBI	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
BstMCI	CGRYCG	1 cut(s)	1040
BstMWI	GCNNNNNNNGC	3 cut(s)	73, 214, 279
BstNI	CCWGG	1 cut(s)	549
BstNSI	RCATGY	4 cut(s)	301, 511, 700, 901
BstPI	GGTNACC	1 cut(s)	350
BstSCI	CCNGG	1 cut(s)	547
BstV1I	GCAGC	3 cut(s)	76, 398, 687
BstX2I	RGATCY	1 cut(s)	628
BstYI	RGATCY	1 cut(s)	628
BstZI	CGGCCG	1 cut(s)	1037
Bsu36I	CCTNAGG	1 cut(s)	813
BsuRI	GGCC	2 cut(s)	1039, 1153
BtgI	CCRYGG	1 cut(s)	292
BtgZI	GCGATG	1 cut(s)	1024
BtrI	CACGTC	1 cut(s)	1083
BtsCI	GGATG	6 cut(s)	64, 319, 427, 467, 1024, 1054
BtsI	GCAGTG	1 cut(s)	19
BtsIMutI	CAGTG	1 cut(s)	19
Cac8I	GCNNGC	2 cut(s)	509, 621
CaiI	CAGNNNCTG	1 cut(s)	365
CciI	TCATGA	1 cut(s)	114
CfoI	GCGC	1 cut(s)	210
Cfr13I	GGNCC	1 cut(s)	1151
Csp6I	GTAC	3 cut(s)	301, 568, 856
CviAII	CATG	8 cut(s)	115, 187, 298, 508, 697, 775, 805, 898
CviQI	GTAC	3 cut(s)	301, 568, 856
DdeI	CTNAG	6 cut(s)	366, 380, 441, 813, 914, 1119
DpnI	GATC	8 cut(s)	36, 45, 113, 230, 426, 630, 1103, 1113
DpnII	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
EaeI	YGGCCR	1 cut(s)	1037
EagI	CGGCCG	1 cut(s)	1037
Eam1104I	CTCTTC	3 cut(s)	44, 98, 339
EarI	CTCTTC	3 cut(s)	44, 98, 339
EclXI	CGGCCG	1 cut(s)	1037
Eco31I	GGTCTC	2 cut(s)	114, 952
Eco52I	CGGCCG	1 cut(s)	1037
Eco57I	CTGAAG	2 cut(s)	68, 918
Eco72I	CACGTG	2 cut(s)	269, 716
Eco81I	CCTNAGG	1 cut(s)	813
Eco88I	CYCGRG	1 cut(s)	747
Eco91I	GGTNACC	1 cut(s)	350
EcoO109I	RGGNCCY	1 cut(s)	1151
EcoO65I	GGTNACC	1 cut(s)	350
EcoRII	CCWGG	1 cut(s)	547
FaeI	CATG	8 cut(s)	118, 190, 301, 511, 700, 778, 808, 901
FalI	AAGNNNNNCTT	2 cut(s)	373, 405
FatI	CATG	8 cut(s)	114, 186, 297, 507, 696, 774, 804, 897
FauI	CCCGC	1 cut(s)	244
Fnu4HI	GCNGC	4 cut(s)	65, 387, 701, 1037
FokI	GGATG	6 cut(s)	71, 326, 414, 454, 1031, 1061
Fsp4HI	GCNGC	4 cut(s)	65, 387, 701, 1037
FspBI	CTAG	4 cut(s)	422, 626, 636, 992
GlaI	GCGC	1 cut(s)	209
GluI	GCNGC	4 cut(s)	65, 387, 701, 1037
GsaI	CCCAGC	1 cut(s)	1018
GsuI	CTGGAG	1 cut(s)	89
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	2 cut(s)	1039, 1153
HapII	CCGG	2 cut(s)	355, 1040
HhaI	GCGC	1 cut(s)	210
Hin1II	CATG	8 cut(s)	118, 190, 301, 511, 700, 778, 808, 901
Hin6I	GCGC	1 cut(s)	208
HinP1I	GCGC	1 cut(s)	208
HindIII	AAGCTT	1 cut(s)	756
HpaII	CCGG	2 cut(s)	355, 1040
HphI	GGTGA	2 cut(s)	344, 353
Hpy166II	GTNNAC	3 cut(s)	289, 673, 856
Hpy188I	TCNGA	5 cut(s)	39, 48, 472, 561, 925
Hpy188III	TCNNGA	8 cut(s)	91, 115, 311, 398, 724, 812, 908, 1109
Hpy8I	GTNNAC	3 cut(s)	289, 673, 856
Hpy99I	CGWCG	3 cut(s)	308, 536, 1087
HpyAV	CCTTC	1 cut(s)	286
HpyCH4III	ACNGT	3 cut(s)	286, 293, 308
HpyCH4IV	ACGT	3 cut(s)	268, 715, 1082
HpyCH4V	TGCA	2 cut(s)	266, 731
HpyF10VI	GCNNNNNNNGC	3 cut(s)	73, 214, 279
HpyF3I	CTNAG	6 cut(s)	366, 380, 441, 813, 914, 1119
HpySE526I	ACGT	3 cut(s)	268, 715, 1082
Hsp92II	CATG	8 cut(s)	118, 190, 301, 511, 700, 778, 808, 901
HspAI	GCGC	1 cut(s)	208
Kzo9I	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
LguI	GCTCTTC	2 cut(s)	44, 98
LmnI	GCTCC	1 cut(s)	814
Lsp1109I	GCAGC	3 cut(s)	76, 398, 687
LweI	GCATC	4 cut(s)	153, 876, 1001, 1009
MaeI	CTAG	4 cut(s)	422, 626, 636, 992
MaeII	ACGT	3 cut(s)	268, 715, 1082
MaeIII	GTNAC	5 cut(s)	350, 436, 800, 893, 928
MalI	GATC	8 cut(s)	36, 45, 113, 230, 426, 630, 1103, 1113
MboI	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
MboII	GAAGA	6 cut(s)	61, 115, 356, 366, 536, 676
MflI	RGATCY	1 cut(s)	628
MhlI	GDGCHC	1 cut(s)	559
MluCI	AATT	4 cut(s)	163, 326, 501, 952
MmeI	TCCRAC	1 cut(s)	1047
MroXI	GAANNNNTTC	1 cut(s)	543
MseI	TTAA	3 cut(s)	324, 576, 603
MslI	CAYNNNNRTG	2 cut(s)	432, 678
MspA1I	CMGCKG	3 cut(s)	67, 619, 938
MspI	CCGG	2 cut(s)	355, 1040
MspR9I	CCNGG	1 cut(s)	549
MvaI	CCWGG	1 cut(s)	549
MwoI	GCNNNNNNNGC	3 cut(s)	73, 214, 279
NdeII	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
NlaIII	CATG	8 cut(s)	118, 190, 301, 511, 700, 778, 808, 901
NlaIV	GGNNCC	4 cut(s)	77, 274, 283, 810
NmeAIII	GCCGAG	1 cut(s)	537
NmuCI	GTSAC	3 cut(s)	350, 893, 928
NspI	RCATGY	4 cut(s)	301, 511, 700, 901
PaeI	GCATGC	1 cut(s)	511
PaeR7I	CTCGAG	1 cut(s)	747
PagI	TCATGA	1 cut(s)	114
PciSI	GCTCTTC	2 cut(s)	44, 98
PdmI	GAANNNNTTC	1 cut(s)	543
PkrI	GCNGC	4 cut(s)	66, 388, 702, 1038
PmaCI	CACGTG	2 cut(s)	269, 716
PmlI	CACGTG	2 cut(s)	269, 716
Ppu21I	YACGTR	2 cut(s)	269, 716
Psp6I	CCWGG	1 cut(s)	547
PspCI	CACGTG	2 cut(s)	269, 716
PspEI	GGTNACC	1 cut(s)	350
PspFI	CCCAGC	1 cut(s)	1014
PspGI	CCWGG	1 cut(s)	547
PspN4I	GGNNCC	4 cut(s)	77, 274, 283, 810
PspPI	GGNCC	1 cut(s)	1151
PspXI	VCTCGAGB	1 cut(s)	747
PsrI	GAACNNNNNNTAC	2 cut(s)	465, 497
PstNI	CAGNNNCTG	1 cut(s)	365
PsuI	RGATCY	1 cut(s)	628
PvuII	CAGCTG	3 cut(s)	67, 619, 938
RsaI	GTAC	3 cut(s)	302, 569, 857
RsaNI	GTAC	3 cut(s)	301, 568, 856
RseI	CAYNNNNRTG	2 cut(s)	432, 678
SapI	GCTCTTC	2 cut(s)	44, 98
SaqAI	TTAA	3 cut(s)	324, 576, 603
SatI	GCNGC	4 cut(s)	65, 387, 701, 1037
Sau3AI	GATC	8 cut(s)	34, 43, 111, 228, 424, 628, 1101, 1111
Sau96I	GGNCC	1 cut(s)	1151
ScrFI	CCNGG	1 cut(s)	549
SduI	GDGCHC	1 cut(s)	559
SfaNI	GCATC	4 cut(s)	153, 876, 1001, 1009
Sfr274I	CTCGAG	1 cut(s)	747
SlaI	CTCGAG	1 cut(s)	747
SmiMI	CAYNNNNRTG	2 cut(s)	432, 678
SmlI	CTYRAG	3 cut(s)	396, 747, 1107
SmoI	CTYRAG	3 cut(s)	396, 747, 1107
SphI	GCATGC	1 cut(s)	511
Sse9I	AATT	4 cut(s)	163, 326, 501, 952
SsiI	CCGC	2 cut(s)	237, 1036
SspMI	CTAG	4 cut(s)	422, 626, 636, 992
StyD4I	CCNGG	1 cut(s)	547
TaaI	ACNGT	3 cut(s)	286, 293, 308
TaiI	ACGT	3 cut(s)	271, 718, 1085
TaqI	TCGA	4 cut(s)	231, 748, 1077, 1085
TasI	AATT	4 cut(s)	163, 326, 501, 952
TatI	WGTACW	1 cut(s)	855
TauI	GCSGC	1 cut(s)	1039
Tru1I	TTAA	3 cut(s)	324, 576, 603
Tru9I	TTAA	3 cut(s)	324, 576, 603
TscAI	CASTG	1 cut(s)	19
TseFI	GTSAC	3 cut(s)	350, 893, 928
TseI	GCWGC	3 cut(s)	64, 386, 700
Tsp45I	GTSAC	3 cut(s)	350, 893, 928
TspDTI	ATGAA	3 cut(s)	17, 456, 1019
TspGWI	ACGGA	1 cut(s)	247
TspRI	CASTG	1 cut(s)	19
XapI	RAATTY	1 cut(s)	952
XceI	RCATGY	4 cut(s)	301, 511, 700, 901
XhoI	CTCGAG	1 cut(s)	747
XmnI	GAANNNNTTC	1 cut(s)	543
XspI	CTAG	4 cut(s)	422, 626, 636, 992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.