RLG00000005876

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0003110
Physical Location & Seq
Reverse (-)
2505649 .. 2507478
1830 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005876

Sequence Viewer

Length: 1080 bp
ATGGAGGAGGAACAAAGAGAAGGGTTTCGTCCGGGGAAGAACAAGATTGACATAAAGAGTATGGACGATCAGCTACAGAAGCATCTTGATAGAGTATCCATCATAGAGATGAAGAAGAAGGAGCAAGACAATTACAGAGTTAGAGAAAGAGTTGGAGCCATGGAAATACAAGAGATACAAGAATGGGAAATCGATCCCGAAAAACTGGTTATTAATGAAACCTTTGCTCGTGGCACCTTTGCTTCTGTTCACAGAGGCCTTTACAATGGCCAACCAATTGCAGTTAAAGTGTTGGATTGGGGAGAAGAGGGAGAAAGAACAAAAGCCTTGCAAAGAGATTTTCAGCGTGAAGTTTCTGCTTGGTATAAGCTTGAACATGTCAATATTACTAAGTGCATTGGAGCTACAACAGCGATAACTTCAAAATTAAAATTACAAAGTAATAACACGGAGCTAAGTAGTAATTCTGCTTGTGTAATTACCGAATATCTTTCTGGAGGTACTCTCAAGTCTTACCTCATTAAGTACCGCGAAAGGAAGCTGCCTATCGAGGATGTGTTGCAGCTAGCACTGGATCTTGCAAGAGGATTGAGCTATTTGCACTCGAAGAACATCGTTCACAGAGATGTGAAAACAGAAAATCTGCTTCTTGATAAGAATCGGATGGTAAAGATAGCAGATTTTGGTGTTGCACGTCTTGAGGCTTCGAATTTGAGTGAGATGACAGGCAACACTGGCACCCTTGGATACATGGCCCCTGAGGTATTGGAGTCTAAGCCGTATGACAAGAAATGCGATGTTTATAGCTTTGGAATTTGTTTATGGGAGATTTGTTGCTGCCAAATGCCGTACCCTAACTATTCATTTTCAGATTTAACTTCAGCTGTTGTATATAAAAATTTAAGACCACAAATACCTAAAAGTTGTCCAAGATCCTTGGCCAAAGTAATGAAAAGATGTTGGGATGCAGAACCCAGCAAAAGGCCAGAAATGGATGAAGTTGTTACCATGTTAGAGGCTATTGACAAATCAAAACATCCCCACGGTTGCTTCTGTTTCTCCATGCTAGAGACTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

360

Amino Acids

41.19

Weight (kDa)

7.5

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 71 - 338 1.7e-61 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 74 - 335 2.2e-50 Protein kinase domain
Kinase-like PF14531 174 - 286 3.1e-06 Kinase-like
Pkinase_fungal PF17667 191 - 270 5.8e-06 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 233, 737
AccII CGCG 1 cut(s) 531
AciI CCGC 1 cut(s) 529
AclWI GGATC 3 cut(s) 188, 582, 927
AcoI YGGCCR 2 cut(s) 268, 939
AcsI RAATTY 3 cut(s) 709, 813, 898
AcuI CTGAAG 1 cut(s) 864
AfaI GTAC 3 cut(s) 502, 527, 851
AfiI CCNNNNNNNGG 1 cut(s) 981
AflIII ACRYGT 1 cut(s) 376
AgsI TTSAA 2 cut(s) 374, 423
AjiI CACGTC 1 cut(s) 695
AluBI AGCT 9 cut(s) 73, 370, 404, 454, 541, 565, 594, 807, 884
AluI AGCT 9 cut(s) 73, 370, 404, 454, 541, 565, 594, 807, 884
Alw26I GTCTC 1 cut(s) 1064
AlwI GGATC 3 cut(s) 188, 582, 927
AoxI GGCC 5 cut(s) 256, 268, 753, 939, 983
ApeKI GCWGC 3 cut(s) 541, 562, 837
ApoI RAATTY 3 cut(s) 709, 813, 898
AseI ATTAAT 1 cut(s) 213
Asp700I GAANNNNTTC 1 cut(s) 24
AspS9I GGNCC 1 cut(s) 754
AsuC2I CCSGG 1 cut(s) 33
AsuII TTCGAA 1 cut(s) 707
AsuNHI GCTAGC 1 cut(s) 565
AxyI CCTNAGG 1 cut(s) 759
BalI TGGCCA 2 cut(s) 270, 941
BanI GGYRCC 2 cut(s) 233, 737
BauI CACGAG 1 cut(s) 228
BbvI GCAGC 3 cut(s) 528, 574, 824
BccI CCATC 2 cut(s) 107, 658
BceAI ACGGC 2 cut(s) 763, 832
BciVI GTATCC 2 cut(s) 106, 740
BcnI CCSGG 1 cut(s) 33
BcoDI GTCTC 1 cut(s) 1064
BfaI CTAG 2 cut(s) 566, 1067
BfmI CTRYAG 1 cut(s) 74
BfuI GTATCC 2 cut(s) 106, 740
BisI GCNGC 3 cut(s) 542, 563, 838
BlsI GCNGC 3 cut(s) 543, 564, 839
Bme1390I CCNGG 1 cut(s) 33
BmgBI CACGTC 1 cut(s) 695
BmgT120I GGNCC 1 cut(s) 754
BmiI GGNNCC 4 cut(s) 157, 235, 739, 756
BmrFI CCNGG 1 cut(s) 33
BmsI GCATC 2 cut(s) 91, 955
BmtI GCTAGC 1 cut(s) 569
BplI GAGNNNNNCTC 2 cut(s) 489, 521
BpmI CTGGAG 1 cut(s) 516
Bpu14I TTCGAA 1 cut(s) 707
BpuEI CTTGAG 2 cut(s) 491, 719
BpuMI CCSGG 1 cut(s) 33
Bsa29I ATCGAT 1 cut(s) 192
BsaBI GATNNNNATC 1 cut(s) 657
BsaJI CCNNGG 5 cut(s) 32, 159, 742, 936, 1042
Bsc4I CCNNNNNNNGG 1 cut(s) 981
Bse1I ACTGG 3 cut(s) 210, 576, 739
Bse21I CCTNAGG 1 cut(s) 759
Bse8I GATNNNNATC 1 cut(s) 657
BseCI ATCGAT 1 cut(s) 192
BseDI CCNNGG 5 cut(s) 32, 159, 742, 936, 1042
BseGI GGATG 5 cut(s) 559, 669, 970, 1000, 1036
BseJI GATNNNNATC 1 cut(s) 657
BseLI CCNNNNNNNGG 1 cut(s) 981
BseMII CTCAG 1 cut(s) 750
BseNI ACTGG 3 cut(s) 210, 576, 739
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 3 cut(s) 528, 574, 824
BseYI CCCAGC 1 cut(s) 974
Bsh1236I CGCG 1 cut(s) 531
BshFI GGCC 5 cut(s) 258, 270, 755, 941, 985
BshNI GGYRCC 2 cut(s) 233, 737
BshVI ATCGAT 1 cut(s) 192
BsiSI CCGG 1 cut(s) 32
BslI CCNNNNNNNGG 1 cut(s) 981
BsmAI GTCTC 1 cut(s) 1064
BsnI GGCC 5 cut(s) 258, 270, 755, 941, 985
Bsp119I TTCGAA 1 cut(s) 707
Bsp143I GATC 4 cut(s) 67, 193, 574, 932
Bsp19I CCATGG 1 cut(s) 159
BspACI CCGC 1 cut(s) 529
BspANI GGCC 5 cut(s) 258, 270, 755, 941, 985
BspCNI CTCAG 1 cut(s) 751
BspDI ATCGAT 1 cut(s) 192
BspFNI CGCG 1 cut(s) 531
BspLI GGNNCC 4 cut(s) 157, 235, 739, 756
BspOI GCTAGC 1 cut(s) 569
BspPI GGATC 3 cut(s) 188, 582, 927
BspT104I TTCGAA 1 cut(s) 707
BspT107I GGYRCC 2 cut(s) 233, 737
BsrI ACTGG 3 cut(s) 210, 576, 739
BssECI CCNNGG 5 cut(s) 32, 159, 742, 936, 1042
BssMI GATC 4 cut(s) 67, 193, 574, 932
BssSI CACGAG 1 cut(s) 228
BssT1I CCWWGG 3 cut(s) 159, 742, 936
Bst2BI CACGAG 1 cut(s) 228
Bst4CI ACNGT 1 cut(s) 1046
Bst6I CTCTTC 1 cut(s) 300
BstBI TTCGAA 1 cut(s) 707
BstC8I GCNNGC 1 cut(s) 567
BstDEI CTNAG 4 cut(s) 390, 455, 759, 774
BstDSI CCRYGG 2 cut(s) 159, 1042
BstF5I GGATG 5 cut(s) 559, 669, 970, 1000, 1036
BstFNI CGCG 1 cut(s) 531
BstKTI GATC 4 cut(s) 70, 196, 577, 935
BstMAI GTCTC 1 cut(s) 1064
BstMBI GATC 4 cut(s) 67, 193, 574, 932
BstMWI GCNNNNNNNGC 3 cut(s) 79, 410, 735
BstNSI RCATGY 1 cut(s) 380
BstSCI CCNGG 1 cut(s) 31
BstSFI CTRYAG 1 cut(s) 74
BstUI CGCG 1 cut(s) 531
BstV1I GCAGC 3 cut(s) 528, 574, 824
BstX2I RGATCY 2 cut(s) 574, 932
BstYI RGATCY 2 cut(s) 574, 932
Bsu15I ATCGAT 1 cut(s) 192
Bsu36I CCTNAGG 1 cut(s) 759
BsuI GTATCC 2 cut(s) 106, 740
BsuRI GGCC 5 cut(s) 258, 270, 755, 941, 985
BsuTUI ATCGAT 1 cut(s) 192
BtgI CCRYGG 2 cut(s) 159, 1042
BtgZI GCGATG 1 cut(s) 810
BtrI CACGTC 1 cut(s) 695
BtsCI GGATG 5 cut(s) 559, 669, 970, 1000, 1036
BtsIMutI CAGTG 2 cut(s) 569, 732
Cac8I GCNNGC 1 cut(s) 567
Cfr13I GGNCC 1 cut(s) 754
ClaI ATCGAT 1 cut(s) 192
Csp6I GTAC 3 cut(s) 501, 526, 850
CviAII CATG 5 cut(s) 160, 377, 751, 1009, 1063
CviQI GTAC 3 cut(s) 501, 526, 850
DdeI CTNAG 4 cut(s) 390, 455, 759, 774
DpnI GATC 4 cut(s) 69, 195, 576, 934
DpnII GATC 4 cut(s) 67, 193, 574, 932
EaeI YGGCCR 2 cut(s) 268, 939
Eam1104I CTCTTC 1 cut(s) 300
EarI CTCTTC 1 cut(s) 300
Eco130I CCWWGG 3 cut(s) 159, 742, 936
Eco147I AGGCCT 1 cut(s) 258
Eco57I CTGAAG 1 cut(s) 864
Eco81I CCTNAGG 1 cut(s) 759
EcoT14I CCWWGG 3 cut(s) 159, 742, 936
ErhI CCWWGG 3 cut(s) 159, 742, 936
FaeI CATG 5 cut(s) 163, 380, 754, 1012, 1066
FatI CATG 5 cut(s) 159, 376, 750, 1008, 1062
Fnu4HI GCNGC 3 cut(s) 542, 563, 838
FokI GGATG 5 cut(s) 566, 676, 977, 1007, 1023
Fsp4HI GCNGC 3 cut(s) 542, 563, 838
FspBI CTAG 2 cut(s) 566, 1067
GluI GCNGC 3 cut(s) 542, 563, 838
GsaI CCCAGC 1 cut(s) 978
GsuI CTGGAG 1 cut(s) 516
HaeIII GGCC 5 cut(s) 258, 270, 755, 941, 985
HapII CCGG 1 cut(s) 32
Hin1II CATG 5 cut(s) 163, 380, 754, 1012, 1066
HindIII AAGCTT 1 cut(s) 368
HinfI GANTC 2 cut(s) 658, 770
HpaII CCGG 1 cut(s) 32
Hpy166II GTNNAC 2 cut(s) 250, 619
Hpy188I TCNGA 2 cut(s) 663, 871
Hpy188III TCNNGA 5 cut(s) 86, 197, 495, 650, 698
Hpy8I GTNNAC 2 cut(s) 250, 619
HpyAV CCTTC 2 cut(s) 14, 112
HpyCH4III ACNGT 1 cut(s) 1046
HpyCH4IV ACGT 1 cut(s) 694
HpyCH4V TGCA 8 cut(s) 281, 331, 396, 562, 581, 601, 692, 968
HpyF10VI GCNNNNNNNGC 3 cut(s) 79, 410, 735
HpyF3I CTNAG 4 cut(s) 390, 455, 759, 774
HpySE526I ACGT 1 cut(s) 694
Hsp92II CATG 5 cut(s) 163, 380, 754, 1012, 1066
Kzo9I GATC 4 cut(s) 67, 193, 574, 932
LmnI GCTCC 4 cut(s) 121, 155, 401, 451
LpnPI CCDG 9 cut(s) 45, 191, 480, 557, 711, 720, 771, 988, 999
Lsp1109I GCAGC 3 cut(s) 528, 574, 824
LweI GCATC 2 cut(s) 91, 955
MaeI CTAG 2 cut(s) 566, 1067
MaeII ACGT 1 cut(s) 694
MaeIII GTNAC 1 cut(s) 1003
MalI GATC 4 cut(s) 69, 195, 576, 934
MboI GATC 4 cut(s) 67, 193, 574, 932
MboII GAAGA 5 cut(s) 49, 124, 127, 317, 619
MfeI CAATTG 1 cut(s) 276
MflI RGATCY 2 cut(s) 574, 932
MlsI TGGCCA 2 cut(s) 270, 941
MluCI AATT 9 cut(s) 130, 276, 425, 431, 463, 477, 709, 813, 898
MluNI TGGCCA 2 cut(s) 270, 941
MlyI GAGTC 1 cut(s) 779
MmeI TCCRAC 2 cut(s) 133, 273
MnlI CCTC 9 cut(s) 248, 301, 491, 527, 544, 578, 694, 754, 1009
Mox20I TGGCCA 2 cut(s) 270, 941
MroXI GAANNNNTTC 1 cut(s) 24
MscI TGGCCA 2 cut(s) 270, 941
MseI TTAA 6 cut(s) 213, 285, 428, 522, 875, 902
MslI CAYNNNNRTG 2 cut(s) 107, 624
Msp20I TGGCCA 2 cut(s) 270, 941
MspA1I CMGCKG 1 cut(s) 884
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 1 cut(s) 33
MunI CAATTG 1 cut(s) 276
MvnI CGCG 1 cut(s) 531
MwoI GCNNNNNNNGC 3 cut(s) 79, 410, 735
NciI CCSGG 1 cut(s) 33
NcoI CCATGG 1 cut(s) 159
NdeII GATC 4 cut(s) 67, 193, 574, 932
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 5 cut(s) 163, 380, 754, 1012, 1066
NlaIV GGNNCC 4 cut(s) 157, 235, 739, 756
NspI RCATGY 1 cut(s) 380
NspV TTCGAA 1 cut(s) 707
PceI AGGCCT 1 cut(s) 258
PciI ACATGT 1 cut(s) 376
PdmI GAANNNNTTC 1 cut(s) 24
PfeI GAWTC 1 cut(s) 658
PkrI GCNGC 3 cut(s) 543, 564, 839
PleI GAGTC 1 cut(s) 778
PpsI GAGTC 1 cut(s) 778
PscI ACATGT 1 cut(s) 376
PshBI ATTAAT 1 cut(s) 213
PspFI CCCAGC 1 cut(s) 974
PspN4I GGNNCC 4 cut(s) 157, 235, 739, 756
PspPI GGNCC 1 cut(s) 754
PsuI RGATCY 2 cut(s) 574, 932
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 3 cut(s) 502, 527, 851
RsaNI GTAC 3 cut(s) 501, 526, 850
RseI CAYNNNNRTG 2 cut(s) 107, 624
SaqAI TTAA 6 cut(s) 213, 285, 428, 522, 875, 902
SatI GCNGC 3 cut(s) 542, 563, 838
Sau3AI GATC 4 cut(s) 67, 193, 574, 932
Sau96I GGNCC 1 cut(s) 754
SchI GAGTC 1 cut(s) 779
ScrFI CCNGG 1 cut(s) 33
SfaNI GCATC 2 cut(s) 91, 955
SfcI CTRYAG 1 cut(s) 74
SfuI TTCGAA 1 cut(s) 707
SmiMI CAYNNNNRTG 2 cut(s) 107, 624
SmlI CTYRAG 2 cut(s) 506, 698
SmoI CTYRAG 2 cut(s) 506, 698
Sse9I AATT 9 cut(s) 130, 276, 425, 431, 463, 477, 709, 813, 898
SseBI AGGCCT 1 cut(s) 258
SsiI CCGC 1 cut(s) 529
SspI AATATT 1 cut(s) 385
SspMI CTAG 2 cut(s) 566, 1067
StuI AGGCCT 1 cut(s) 258
StyD4I CCNGG 1 cut(s) 31
StyI CCWWGG 3 cut(s) 159, 742, 936
TaaI ACNGT 1 cut(s) 1046
TaiI ACGT 1 cut(s) 697
TaqI TCGA 4 cut(s) 192, 549, 605, 707
TasI AATT 9 cut(s) 130, 276, 425, 431, 463, 477, 709, 813, 898
TfiI GAWTC 1 cut(s) 658
Tru1I TTAA 6 cut(s) 213, 285, 428, 522, 875, 902
Tru9I TTAA 6 cut(s) 213, 285, 428, 522, 875, 902
TscAI CASTG 2 cut(s) 576, 739
TseI GCWGC 3 cut(s) 541, 562, 837
TspDTI ATGAA 5 cut(s) 125, 231, 852, 965, 1011
TspGWI ACGGA 1 cut(s) 464
TspRI CASTG 2 cut(s) 576, 739
VspI ATTAAT 1 cut(s) 213
XapI RAATTY 3 cut(s) 709, 813, 898
XceI RCATGY 1 cut(s) 380
XmnI GAANNNNTTC 1 cut(s) 24
XspI CTAG 2 cut(s) 566, 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.