Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Forward (+)

276859 .. 283702

Gene Structure 6844 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1002600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGTGGTGAAATCTGCTGAAGGAGGCGCTGACGCTGCAGACCCACATTCCAAAAACGAGATTTCTTCGCCGCCGCGAAGGAGAACTAGTTCTCGCCTTAAGGGCAAAGAGAAACCCCAGAAGCAACTCCTGATCCGCAAAAGAGTTGCATTACTTGATGAGCACAGAGACGGAGGAGAGCAAGACGGAGGGGGAGACGGAGGTAGCCTCAGCAAAAGACCCAATGTCGACGGTGGAAAAAGCTCCCATGCTAAAAATGAGGCTGGCGACGCCGGCTCTAACGGTGGTTTAGAAGACGGAGCCAGCAAACCCACTGATTCTTCGGTTGAGAAGAGCGACCATGCTAAGGTCAAAGAGACCCTCAGGCTGTTCAACAAGCATTACCTTTATTTCGTACAGGAAGAAGAAATGAGGTGCAGAAAAGTGGAGGCTGATAAGAAGGCCTCCAAATCCGCAAAAAAGGGCTCGAAATCTTCGAAAAAATCTAAGAAAGAGGCTTCCCCGCCAGAGGCAAAGGCGTCAAAACGACCTGATTTGAAGGCAGTATCCAAGATGATGGAGAGAAAAGAAATTTTGAATGCCACTAAAAGAATCGGAAGCATTCCAGGTATTGATGTTGGGCATCAGTTCTATTCTCGGGCTGAAATGGTTGCTGTTGGTTTTCATAGCCACTGGCTGAATGGGATTGACTATATGGGGCAAAACTACGGCAAAGGGGAGTACAGTAACTACACATTTCCACTCGCAGTGGCCATTGTTATATCTGGCATGTATGAGGATGATTTGGATAATGCTGAGGATGTTGTGTATACTGGCCAAGGTGGTCATAATTTGACAGGTGATAAGCGTCAAATTCGAGACCAAGTTCTAGAACGTGGTAATTTAGCGCTCAAGAATTGTGTGGACCAATGTGTACCTGTTAGAGTAGTTCGTGGGCATGATTGTAAAAGTAGTTATGTTGGCAAAGTTTACACTTACGATGGTTTGTACAAGGTTGTTCAGTATTGGGCAGAGAAGGGTCTTTCTGGATTTACTGTTTTTAAGTATCGTCTTAGGCGTATTGAAGGGCAGCCAGTGTTGACCACTAACCAGGTTCAATTTATCAATGGACGTGTACCGCAGTCTGTAGCAGAAATACGCGGATTGGTGTGTGAGGACATCAGTGGGGGCCAAGAGGATGTTCCCATTCCGGCTACCAATTTGGTTGATGATCCACCTGTTGCACCCACAGGTTTCACGTATTGTAAGTCTATCCAAGTTGCACAAAATGTGAAGCTTCCCACAGATGCCACTGGATGCAATTGCAAAGGTTCTTGCACAGACCCCAAGACTTGTGCATGCACCATGCTTAATGGCGATGATTTCCCATATGTGCAGCGTGATGGTGGCAGATTAATTGAGGCGAAGGATGTAGTGTTTGAATGTGGTCCAAAATGTGGTTGTGGACTTTCTTGCATCAATCGTACTTCTCAGAGAGGGCTGAAGTATCGTTTTGAGGTTTTCCGGACACCAATGAAGGGATGGGCTGTTAGATCATGGGATTTTATACCTTCTGGAGCACCAGTCTGCGAGTACATAGGAGTAATTAGAAGGACAGAAGATGTAGATAGTGCCTTAGAGAACTATTACATATTTGACATGGATTGCTTGCAAACGATGAAGGGGCTGGATGGAAGAGAGAGGCGATCACAAGCTGTATCCATACCAGCAGTTCATTCACTGGAGAGACCTGATGATCAGAGCTCTGATAGCGGGCCAGAGTTCTGCATTGATGCAGGTTCAAGTGGAAACATAGCAAGATTTATAAATCACAGTTGTGAGCCTAATCTGTTTGTCCAGTCTGTGTTGAGCTCACACCACGACTTAAAACTAGCTCGGGTGATGCTGTTTGCTGCGGACAACATACCTCCTCTGCAGGAGCTCACATATGACTATGGCTATGCCCTTGATAGTGTCATGGGTCCCGATGGGAAAGTGAAAAAGATGTTCTGCCATTGTGGTGCCACAGGTTGCAGGAAGCGCTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

677

Amino Acids

74.36

Weight (kDa)

8.53

Isoelectric Point (pI)

42.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	197 - 357	2.5e-51	SAD/SRA domain
Pre-SET	PF05033	389 - 488	4.1e-18	Pre-SET motif
SET	PF00856	507 - 646	1.7e-18	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1805
Acc36I	ACCTGC	1 cut(s)	1766
AccB1I	GGYRCC	1 cut(s)	2000
AccB7I	CCANNNNNTGG	1 cut(s)	1436
AccI	GTMKAC	2 cut(s)	228, 809
AccII	CGCG	2 cut(s)	76, 1140
AccIII	TCCGGA	1 cut(s)	1503
AciI	CCGC	9 cut(s)	71, 74, 136, 453, 503, 1118, 1140, 1752, 1895
AclWI	GGATC	2 cut(s)	127, 1205
AcoI	YGGCCR	2 cut(s)	750, 814
AcsI	RAATTY	2 cut(s)	570, 852
AcuI	CTGAAG	2 cut(s)	39, 1502
AcyI	GRCGYC	2 cut(s)	270, 518
AfaI	GTAC	7 cut(s)	396, 722, 915, 989, 1116, 1465, 1574
AfeI	AGCGCT	2 cut(s)	888, 2021
AfiI	CCNNNNNNNGG	4 cut(s)	346, 508, 1436, 1517
AflII	CTTAAG	1 cut(s)	98
AflIII	ACRYGT	1 cut(s)	1111
AgsI	TTSAA	7 cut(s)	373, 538, 577, 1064, 1097, 1421, 1782
AhdI	GACNNNNNGTC	1 cut(s)	224
AhlI	ACTAGT	1 cut(s)	86
AjiI	CACGTC	1 cut(s)	1112
AjnI	CCWGG	2 cut(s)	604, 1089
AjuI	GAANNNNNNNTTGG	2 cut(s)	1164, 1196
AleI	CACNNNNGTG	1 cut(s)	1815
AloI	GAACNNNNNNTCC	2 cut(s)	73, 105
AluBI	AGCT	7 cut(s)	243, 1276, 1694, 1743, 1851, 1874, 1921
AluI	AGCT	7 cut(s)	243, 1276, 1694, 1743, 1851, 1874, 1921
Alw21I	GWGCWC	5 cut(s)	165, 1561, 1745, 1853, 1923
Alw26I	GTCTC	5 cut(s)	162, 189, 350, 852, 1720
AlwI	GGATC	2 cut(s)	127, 1205
Ama87I	CYCGRG	2 cut(s)	636, 1875
Aor13HI	TCCGGA	1 cut(s)	1503
Aor51HI	AGCGCT	2 cut(s)	888, 2021
AoxI	GGCC	5 cut(s)	441, 750, 814, 1168, 1754
ApeKI	GCWGC	4 cut(s)	35, 1069, 1375, 1892
ApoI	RAATTY	2 cut(s)	570, 852
AseI	ATTAAT	1 cut(s)	1394
Asp700I	GAANNNNTTC	1 cut(s)	88
AspLEI	GCGC	3 cut(s)	29, 889, 2022
AspS9I	GGNCC	5 cut(s)	904, 1168, 1427, 1754, 1961
AsuHPI	GGTGA	3 cut(s)	19, 851, 1891
AsuII	TTCGAA	1 cut(s)	476
AvaI	CYCGRG	2 cut(s)	636, 1875
AvaII	GGWCC	3 cut(s)	904, 1427, 1961
AxyI	CCTNAGG	1 cut(s)	362
BalI	TGGCCA	2 cut(s)	752, 816
BanI	GGYRCC	1 cut(s)	2000
BanII	GRGCYC	4 cut(s)	467, 1745, 1853, 1923
BbsI	GAAGAC	1 cut(s)	300
Bbv12I	GWGCWC	5 cut(s)	165, 1561, 1745, 1853, 1923
BbvCI	CCTCAGC	2 cut(s)	209, 795
BbvI	GCAGC	4 cut(s)	22, 1081, 1387, 1879
BccI	CCATC	6 cut(s)	550, 974, 1376, 1515, 1664, 1961
BceAI	ACGGC	1 cut(s)	724
BciT130I	CCWGG	2 cut(s)	606, 1091
BciVI	GTATCC	2 cut(s)	556, 1708
BclI	TGATCA	1 cut(s)	1735
BcoDI	GTCTC	5 cut(s)	162, 189, 350, 852, 1720
BcuI	ACTAGT	1 cut(s)	86
BfaI	CTAG	4 cut(s)	87, 869, 1871, 2029
BfmI	CTRYAG	3 cut(s)	36, 1125, 1913
BfoI	RGCGCY	3 cut(s)	30, 890, 2023
BfrI	CTTAAG	1 cut(s)	98
BfuAI	ACCTGC	1 cut(s)	1766
BfuI	GTATCC	2 cut(s)	556, 1708
BglI	GCCNNNNNGGC	1 cut(s)	102
BisI	GCNGC	6 cut(s)	36, 71, 74, 1070, 1376, 1893
BlsI	GCNGC	6 cut(s)	37, 72, 75, 1071, 1377, 1894
Bme1390I	CCNGG	2 cut(s)	606, 1091
Bme18I	GGWCC	3 cut(s)	904, 1427, 1961
BmeRI	GACNNNNNGTC	1 cut(s)	224
BmeT110I	CYCGRG	2 cut(s)	636, 1875
BmgBI	CACGTC	1 cut(s)	1112
BmgT120I	GGNCC	5 cut(s)	904, 1168, 1427, 1754, 1961
BmiI	GGNNCC	5 cut(s)	301, 1169, 1962, 1963, 2002
BmrFI	CCNGG	2 cut(s)	606, 1091
BmsI	GCATC	6 cut(s)	631, 1276, 1286, 1464, 1762, 1872
BpiI	GAAGAC	1 cut(s)	300
BplI	GAGNNNNNCTC	2 cut(s)	192, 224
BpmI	CTGGAG	2 cut(s)	1575, 1742
Bpu10I	CCTNAGC	3 cut(s)	209, 345, 795
Bpu14I	TTCGAA	1 cut(s)	476
BpuEI	CTTGAG	1 cut(s)	875
BsaAI	YACGTR	1 cut(s)	1239
BsaHI	GRCGYC	2 cut(s)	270, 518
BsaI	GGTCTC	3 cut(s)	350, 852, 1720
BsaJI	CCNNGG	1 cut(s)	817
BsaWI	WCCGGW	1 cut(s)	1503
BsaXI	ACNNNNNCTCC	4 cut(s)	73, 103, 1548, 1578
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 508, 1436, 1517
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	7 cut(s)	677, 817, 1073, 1297, 1562, 1725, 1837
Bse21I	CCTNAGG	1 cut(s)	362
BseAI	TCCGGA	1 cut(s)	1503
BseBI	CCWGG	2 cut(s)	606, 1091
BseDI	CCNNGG	1 cut(s)	817
BseGI	GGATG	7 cut(s)	784, 805, 1183, 1301, 1414, 1526, 1675
BseLI	CCNNNNNNNGG	4 cut(s)	346, 508, 1436, 1517
BseMII	CTCAG	4 cut(s)	223, 376, 786, 1484
BseNI	ACTGG	7 cut(s)	677, 817, 1073, 1297, 1562, 1725, 1837
BseRI	GAGGAG	2 cut(s)	189, 1899
BseXI	GCAGC	4 cut(s)	22, 1081, 1387, 1879
BsgI	GTGCAG	2 cut(s)	436, 1394
Bsh1236I	CGCG	2 cut(s)	76, 1140
BshFI	GGCC	5 cut(s)	443, 752, 816, 1170, 1756
BshNI	GGYRCC	1 cut(s)	2000
BsiHKAI	GWGCWC	5 cut(s)	165, 1561, 1745, 1853, 1923
BsiHKCI	CYCGRG	2 cut(s)	636, 1875
BsiSI	CCGG	3 cut(s)	273, 1190, 1504
BslFI	GGGAC	1 cut(s)	1947
BslI	CCNNNNNNNGG	4 cut(s)	346, 508, 1436, 1517
BsmAI	GTCTC	5 cut(s)	162, 189, 350, 852, 1720
BsmBI	CGTCTC	2 cut(s)	162, 189
BsmFI	GGGAC	1 cut(s)	1947
BsmI	GAATGC	2 cut(s)	583, 600
BsnI	GGCC	5 cut(s)	443, 752, 816, 1170, 1756
Bso31I	GGTCTC	3 cut(s)	350, 852, 1720
BsoBI	CYCGRG	2 cut(s)	636, 1875
Bsp119I	TTCGAA	1 cut(s)	476
Bsp1286I	GDGCHC	6 cut(s)	165, 467, 1561, 1745, 1853, 1923
Bsp13I	TCCGGA	1 cut(s)	1503
Bsp1407I	TGTACA	1 cut(s)	987
Bsp143I	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
BspACI	CCGC	9 cut(s)	71, 74, 136, 453, 503, 1118, 1140, 1752, 1895
BspANI	GGCC	5 cut(s)	443, 752, 816, 1170, 1756
BspCNI	CTCAG	4 cut(s)	222, 375, 787, 1483
BspEI	TCCGGA	1 cut(s)	1503
BspFNI	CGCG	2 cut(s)	76, 1140
BspLI	GGNNCC	5 cut(s)	301, 1169, 1962, 1963, 2002
BspMAI	CTGCAG	2 cut(s)	40, 1917
BspMI	ACCTGC	1 cut(s)	1766
BspPI	GGATC	2 cut(s)	127, 1205
BspQI	GCTCTTC	1 cut(s)	326
BspT104I	TTCGAA	1 cut(s)	476
BspT107I	GGYRCC	1 cut(s)	2000
BspTI	CTTAAG	1 cut(s)	98
BspTNI	GGTCTC	3 cut(s)	350, 852, 1720
BsrFI	RCCGGY	1 cut(s)	272
BsrGI	TGTACA	1 cut(s)	987
BsrI	ACTGG	7 cut(s)	677, 817, 1073, 1297, 1562, 1725, 1837
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	1 cut(s)	817
BssMI	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
BssNAI	GTATAC	1 cut(s)	810
BssNI	GRCGYC	2 cut(s)	270, 518
BssT1I	CCWWGG	1 cut(s)	817
Bst1107I	GTATAC	1 cut(s)	810
Bst2UI	CCWGG	2 cut(s)	606, 1091
Bst4CI	ACNGT	5 cut(s)	233, 284, 725, 1036, 1814
Bst6I	CTCTTC	2 cut(s)	326, 1669
BstACI	GRCGYC	2 cut(s)	270, 518
BstAFI	CTTAAG	1 cut(s)	98
BstAUI	TGTACA	1 cut(s)	987
BstBAI	YACGTR	1 cut(s)	1239
BstBI	TTCGAA	1 cut(s)	476
BstC8I	GCNNGC	6 cut(s)	265, 274, 304, 1339, 1649, 1754
BstDEI	CTNAG	8 cut(s)	209, 345, 362, 486, 795, 1052, 1470, 1615
BstF5I	GGATG	7 cut(s)	784, 805, 1183, 1301, 1414, 1526, 1675
BstFNI	CGCG	2 cut(s)	76, 1140
BstH2I	RGCGCY	3 cut(s)	30, 890, 2023
BstHHI	GCGC	3 cut(s)	29, 889, 2022
BstKTI	GATC	5 cut(s)	135, 1213, 1535, 1688, 1738
BstMAI	GTCTC	5 cut(s)	162, 189, 350, 852, 1720
BstMBI	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
BstMWI	GCNNNNNNNGC	6 cut(s)	35, 102, 269, 273, 1749, 2019
BstNI	CCWGG	2 cut(s)	606, 1091
BstNSI	RCATGY	2 cut(s)	772, 1341
BstSCI	CCNGG	2 cut(s)	604, 1089
BstSFI	CTRYAG	3 cut(s)	36, 1125, 1913
BstUI	CGCG	2 cut(s)	76, 1140
BstV1I	GCAGC	4 cut(s)	22, 1081, 1387, 1879
BstV2I	GAAGAC	1 cut(s)	300
BstXI	CCANNNNNNTGG	1 cut(s)	556
BstZ17I	GTATAC	1 cut(s)	810
Bsu36I	CCTNAGG	1 cut(s)	362
BsuI	GTATCC	2 cut(s)	556, 1708
BsuRI	GGCC	5 cut(s)	443, 752, 816, 1170, 1756
BtgZI	GCGATG	1 cut(s)	1371
BtrI	CACGTC	1 cut(s)	1112
BtsCI	GGATG	7 cut(s)	784, 805, 1183, 1301, 1414, 1526, 1675
BtsI	GCAGTG	1 cut(s)	753
BtsIMutI	CAGTG	7 cut(s)	312, 670, 753, 1080, 1168, 1290, 1718
BveI	ACCTGC	1 cut(s)	1766
Cac8I	GCNNGC	6 cut(s)	265, 274, 304, 1339, 1649, 1754
CfoI	GCGC	3 cut(s)	29, 889, 2022
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	5 cut(s)	904, 1168, 1427, 1754, 1961
CseI	GACGC	4 cut(s)	41, 278, 507, 836
CsiI	ACCWGGT	1 cut(s)	1089
Csp6I	GTAC	7 cut(s)	395, 721, 914, 988, 1115, 1464, 1573
CviAII	CATG	9 cut(s)	248, 341, 769, 938, 1338, 1345, 1536, 1639, 1957
CviQI	GTAC	7 cut(s)	395, 721, 914, 988, 1115, 1464, 1573
DdeI	CTNAG	8 cut(s)	209, 345, 362, 486, 795, 1052, 1470, 1615
DpnI	GATC	5 cut(s)	134, 1212, 1534, 1687, 1737
DpnII	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
DriI	GACNNNNNGTC	1 cut(s)	224
EaeI	YGGCCR	2 cut(s)	750, 814
Eam1104I	CTCTTC	2 cut(s)	326, 1669
Eam1105I	GACNNNNNGTC	1 cut(s)	224
EarI	CTCTTC	2 cut(s)	326, 1669
Ecl136II	GAGCTC	3 cut(s)	1743, 1851, 1921
Eco130I	CCWWGG	1 cut(s)	817
Eco147I	AGGCCT	1 cut(s)	443
Eco24I	GRGCYC	4 cut(s)	467, 1745, 1853, 1923
Eco31I	GGTCTC	3 cut(s)	350, 852, 1720
Eco47I	GGWCC	3 cut(s)	904, 1427, 1961
Eco47III	AGCGCT	2 cut(s)	888, 2021
Eco53kI	GAGCTC	3 cut(s)	1743, 1851, 1921
Eco57I	CTGAAG	2 cut(s)	39, 1502
Eco81I	CCTNAGG	1 cut(s)	362
Eco88I	CYCGRG	2 cut(s)	636, 1875
EcoICRI	GAGCTC	3 cut(s)	1743, 1851, 1921
EcoO109I	RGGNCCY	1 cut(s)	1961
EcoRII	CCWGG	2 cut(s)	604, 1089
EcoT14I	CCWWGG	1 cut(s)	817
EcoT38I	GRGCYC	4 cut(s)	467, 1745, 1853, 1923
ErhI	CCWWGG	1 cut(s)	817
Esp3I	CGTCTC	2 cut(s)	162, 189
FaeI	CATG	9 cut(s)	251, 344, 772, 941, 1341, 1348, 1539, 1642, 1960
FaqI	GGGAC	1 cut(s)	1947
FatI	CATG	9 cut(s)	247, 340, 768, 937, 1337, 1344, 1535, 1638, 1956
FauI	CCCGC	2 cut(s)	510, 1745
FauNDI	CATATG	2 cut(s)	1369, 1927
FbaI	TGATCA	1 cut(s)	1735
FblI	GTMKAC	2 cut(s)	228, 809
Fnu4HI	GCNGC	6 cut(s)	36, 71, 74, 1070, 1376, 1893
FokI	GGATG	7 cut(s)	791, 812, 1190, 1308, 1421, 1533, 1682
FriOI	GRGCYC	4 cut(s)	467, 1745, 1853, 1923
Fsp4HI	GCNGC	6 cut(s)	36, 71, 74, 1070, 1376, 1893
FspBI	CTAG	4 cut(s)	87, 869, 1871, 2029
GlaI	GCGC	3 cut(s)	28, 888, 2021
GluI	GCNGC	6 cut(s)	36, 71, 74, 1070, 1376, 1893
GsuI	CTGGAG	2 cut(s)	1575, 1742
HaeII	RGCGCY	3 cut(s)	30, 890, 2023
HaeIII	GGCC	5 cut(s)	443, 752, 816, 1170, 1756
HapII	CCGG	3 cut(s)	273, 1190, 1504
HgaI	GACGC	4 cut(s)	41, 278, 507, 836
HhaI	GCGC	3 cut(s)	29, 889, 2022
Hin1I	GRCGYC	2 cut(s)	270, 518
Hin1II	CATG	9 cut(s)	251, 344, 772, 941, 1341, 1348, 1539, 1642, 1960
Hin6I	GCGC	3 cut(s)	27, 887, 2020
HinP1I	GCGC	3 cut(s)	27, 887, 2020
HincII	GTYRAC	2 cut(s)	229, 1080
HindII	GTYRAC	2 cut(s)	229, 1080
HindIII	AAGCTT	1 cut(s)	1274
HinfI	GANTC	2 cut(s)	317, 591
HpaII	CCGG	3 cut(s)	273, 1190, 1504
HphI	GGTGA	3 cut(s)	19, 851, 1891
Hpy166II	GTNNAC	8 cut(s)	229, 810, 904, 914, 970, 1080, 1115, 1445
Hpy188I	TCNGA	4 cut(s)	596, 1473, 1740, 1747
Hpy188III	TCNNGA	8 cut(s)	130, 857, 869, 892, 1026, 1504, 1554, 1964
Hpy8I	GTNNAC	8 cut(s)	229, 810, 904, 914, 970, 1080, 1115, 1445
Hpy99I	CGWCG	2 cut(s)	233, 272
HpyCH4III	ACNGT	5 cut(s)	233, 284, 725, 1036, 1814
HpyCH4IV	ACGT	3 cut(s)	874, 1111, 1238
HpyF10VI	GCNNNNNNNGC	6 cut(s)	35, 102, 269, 273, 1749, 2019
HpyF3I	CTNAG	8 cut(s)	209, 345, 362, 486, 795, 1052, 1470, 1615
HpySE526I	ACGT	3 cut(s)	874, 1111, 1238
Hsp92I	GRCGYC	2 cut(s)	270, 518
Hsp92II	CATG	9 cut(s)	251, 344, 772, 941, 1341, 1348, 1539, 1642, 1960
HspAI	GCGC	3 cut(s)	27, 887, 2020
KflI	GGGWCCC	1 cut(s)	1961
Kpn2I	TCCGGA	1 cut(s)	1503
KroI	GCCGGC	1 cut(s)	272
KroNI	GCCGGC	1 cut(s)	274
Ksp22I	TGATCA	1 cut(s)	1735
Kzo9I	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
LguI	GCTCTTC	1 cut(s)	326
LmnI	GCTCC	4 cut(s)	248, 299, 1556, 1918
Lsp1109I	GCAGC	4 cut(s)	22, 1081, 1387, 1879
LweI	GCATC	6 cut(s)	631, 1276, 1286, 1464, 1762, 1872
MabI	ACCWGGT	1 cut(s)	1089
MaeI	CTAG	4 cut(s)	87, 869, 1871, 2029
MaeII	ACGT	3 cut(s)	874, 1111, 1238
MaeIII	GTNAC	1 cut(s)	725
MalI	GATC	5 cut(s)	134, 1212, 1534, 1687, 1737
MboI	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
MboII	GAAGA	9 cut(s)	57, 305, 312, 343, 413, 416, 465, 1610, 1686
MfeI	CAATTG	1 cut(s)	1300
MhlI	GDGCHC	6 cut(s)	165, 467, 1561, 1745, 1853, 1923
MlsI	TGGCCA	2 cut(s)	752, 816
MluNI	TGGCCA	2 cut(s)	752, 816
Mox20I	TGGCCA	2 cut(s)	752, 816
MroI	TCCGGA	1 cut(s)	1503
MroNI	GCCGGC	1 cut(s)	272
MroXI	GAANNNNTTC	1 cut(s)	88
MscI	TGGCCA	2 cut(s)	752, 816
MseI	TTAA	5 cut(s)	99, 1041, 1350, 1394, 1865
MslI	CAYNNNNRTG	2 cut(s)	1815, 1998
Msp20I	TGGCCA	2 cut(s)	752, 816
MspCI	CTTAAG	1 cut(s)	98
MspI	CCGG	3 cut(s)	273, 1190, 1504
MspR9I	CCNGG	2 cut(s)	606, 1091
MunI	CAATTG	1 cut(s)	1300
Mva1269I	GAATGC	2 cut(s)	583, 600
MvaI	CCWGG	2 cut(s)	606, 1091
MvnI	CGCG	2 cut(s)	76, 1140
MwoI	GCNNNNNNNGC	6 cut(s)	35, 102, 269, 273, 1749, 2019
NaeI	GCCGGC	1 cut(s)	274
NdeI	CATATG	2 cut(s)	1369, 1927
NdeII	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
NgoMIV	GCCGGC	1 cut(s)	272
NlaIII	CATG	9 cut(s)	251, 344, 772, 941, 1341, 1348, 1539, 1642, 1960
NlaIV	GGNNCC	5 cut(s)	301, 1169, 1962, 1963, 2002
NspI	RCATGY	2 cut(s)	772, 1341
NspV	TTCGAA	1 cut(s)	476
OliI	CACNNNNGTG	1 cut(s)	1815
PaeI	GCATGC	1 cut(s)	1341
PceI	AGGCCT	1 cut(s)	443
PciSI	GCTCTTC	1 cut(s)	326
PcsI	WCGNNNNNNNCGW	2 cut(s)	473, 1054
PctI	GAATGC	2 cut(s)	583, 600
PdiI	GCCGGC	1 cut(s)	274
PdmI	GAANNNNTTC	1 cut(s)	88
PfeI	GAWTC	2 cut(s)	317, 591
PflMI	CCANNNNNTGG	1 cut(s)	1436
PkrI	GCNGC	6 cut(s)	37, 72, 75, 1071, 1377, 1894
Ppu21I	YACGTR	1 cut(s)	1239
PpuMI	RGGWCCY	1 cut(s)	1961
PshBI	ATTAAT	1 cut(s)	1394
PsiI	TTATAA	1 cut(s)	1805
Psp124BI	GAGCTC	3 cut(s)	1745, 1853, 1923
Psp5II	RGGWCCY	1 cut(s)	1961
Psp6I	CCWGG	2 cut(s)	604, 1089
PspGI	CCWGG	2 cut(s)	604, 1089
PspN4I	GGNNCC	5 cut(s)	301, 1169, 1962, 1963, 2002
PspPI	GGNCC	5 cut(s)	904, 1168, 1427, 1754, 1961
PspPPI	RGGWCCY	1 cut(s)	1961
PstI	CTGCAG	2 cut(s)	40, 1917
RsaI	GTAC	7 cut(s)	396, 722, 915, 989, 1116, 1465, 1574
RsaNI	GTAC	7 cut(s)	395, 721, 914, 988, 1115, 1464, 1573
RseI	CAYNNNNRTG	2 cut(s)	1815, 1998
SacI	GAGCTC	3 cut(s)	1745, 1853, 1923
SalI	GTCGAC	1 cut(s)	227
SapI	GCTCTTC	1 cut(s)	326
SaqAI	TTAA	5 cut(s)	99, 1041, 1350, 1394, 1865
SatI	GCNGC	6 cut(s)	36, 71, 74, 1070, 1376, 1893
Sau3AI	GATC	5 cut(s)	132, 1210, 1532, 1685, 1735
Sau96I	GGNCC	5 cut(s)	904, 1168, 1427, 1754, 1961
ScrFI	CCNGG	2 cut(s)	606, 1091
SduI	GDGCHC	6 cut(s)	165, 467, 1561, 1745, 1853, 1923
SexAI	ACCWGGT	1 cut(s)	1089
SfaNI	GCATC	6 cut(s)	631, 1276, 1286, 1464, 1762, 1872
SfcI	CTRYAG	3 cut(s)	36, 1125, 1913
SfuI	TTCGAA	1 cut(s)	476
SinI	GGWCC	3 cut(s)	904, 1427, 1961
SmiMI	CAYNNNNRTG	2 cut(s)	1815, 1998
SmlI	CTYRAG	2 cut(s)	98, 890
SmoI	CTYRAG	2 cut(s)	98, 890
SpeI	ACTAGT	1 cut(s)	86
SphI	GCATGC	1 cut(s)	1341
SseBI	AGGCCT	1 cut(s)	443
SsiI	CCGC	9 cut(s)	71, 74, 136, 453, 503, 1118, 1140, 1752, 1895
SspMI	CTAG	4 cut(s)	87, 869, 1871, 2029
SstI	GAGCTC	3 cut(s)	1745, 1853, 1923
StuI	AGGCCT	1 cut(s)	443
StyD4I	CCNGG	2 cut(s)	604, 1089
StyI	CCWWGG	1 cut(s)	817
TaaI	ACNGT	5 cut(s)	233, 284, 725, 1036, 1814
TaiI	ACGT	3 cut(s)	877, 1114, 1241
TaqI	TCGA	4 cut(s)	228, 467, 476, 856
TatI	WGTACW	3 cut(s)	720, 987, 1572
TauI	GCSGC	2 cut(s)	73, 76
TfiI	GAWTC	2 cut(s)	317, 591
Tru1I	TTAA	5 cut(s)	99, 1041, 1350, 1394, 1865
Tru9I	TTAA	5 cut(s)	99, 1041, 1350, 1394, 1865
TscAI	CASTG	7 cut(s)	319, 677, 753, 1080, 1168, 1297, 1725
TseI	GCWGC	4 cut(s)	35, 1069, 1375, 1892
TspDTI	ATGAA	4 cut(s)	653, 1529, 1673, 1703
TspGWI	ACGGA	4 cut(s)	186, 201, 213, 312
TspRI	CASTG	7 cut(s)	319, 677, 753, 1080, 1168, 1297, 1725
Van91I	CCANNNNNTGG	1 cut(s)	1436
Vha464I	CTTAAG	1 cut(s)	98
VpaK11BI	GGWCC	3 cut(s)	904, 1427, 1961
VspI	ATTAAT	1 cut(s)	1394
XapI	RAATTY	2 cut(s)	570, 852
XbaI	TCTAGA	1 cut(s)	868
XceI	RCATGY	2 cut(s)	772, 1341
XcmI	CCANNNNNNNNNTGG	2 cut(s)	677, 1518
XmiI	GTMKAC	2 cut(s)	228, 809
XmnI	GAANNNNTTC	1 cut(s)	88
XspI	CTAG	4 cut(s)	87, 869, 1871, 2029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.