Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Reverse (-)

13673266 .. 13679254

Gene Structure 5989 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007113

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGCTGCACCGAAGGATTCAGTTCTGGAGCGCCGGGTGAGTCTCCGGCTTCAGTACTCTCAGCAGAAGCCTTTCTATGGTACTAGGAAGAGGACGGAATCGGAGGCCGGTCGAAACGGCGTCGTTGTGAGCAAGAAACCCAAGGTTAAGGTATCATCACTAGTAAGGAAGAGTAGTGAGAGTGGGACCAAAAAATTGGGGAAACACAAAGTCGATGATGATGAAGAAGAAGCTGGAAATTGCGAGAGTGGGACTGAGAAATCGGAGAATGGTAAGGTTGAAGCTGAAGAATCTGGAGATTGTGAGGGTGAGAACAAGAGTGTGGATGTGAAGGAACGTGATATGAGTGTGTATGCTCCTTCCGGAGCTAAGGTTGATGATAAAGGCAAAAGCTATGTTGCGAAGTTGAAGGAGACGCTCAGACTTTTCAATCTGCATTACCTTCACTTTGTTCAGGAAGAGGAGAAGAGATGCAGGAAGCTGGAGAATGAGAGTGAATGCGGTGATGATCTAAAGAAACCTTCCAAACGAGTGGATAAGAAGGCAATTTCTGAGAATGGGAATGGAAGTCTTGGTGTTCCTAAGAAGCAGTCCAAGAGACCTGATCTGAAGGCACTTTCACAGATGTCGACCAACAACGAAATTCTATACCCTGAAAAAACAATTGGTCATCTACCGGGTATTGAGGTCGGGCAACAGTTTTTCTCTCGAGCTGAAATGGTGGTTGTAGGGTTTCATAGCCACTGGTTGAATGGAATTGATATCATTGGAAAATCTAAAGGAAAGGACAAATTCAAGGGCTATACCTTACCAATTGCAGTAGCGATTGTGTTGTCTGGTCAATATGAAGATGATGTTGATAACTCAGATGAAATTGTGTACACTGGCCAAGGTGGAAATGACTTACTTGGTAATAAACGTCAAATCCAAGATCAAGTAATGCGTATGGGTAATTTGGCTCTTAAGAATAATATGGAGCAGTTCGTTCCCGTCAGAGTCATCCGTGGTCATAAATGTGACACTAGCTATACTAAGAAAGTTTATACATATGATGGATTGTACCAGGTTCATCATTATTGGGCAGAGAAGGGTGTAGCTGGGTTTACCGTATTTAAGTACCGTCTGAAGCGTCTTCCAGGGCAGCCTAAATTGATCAGTAATCAGGTTTTATATACTAATGGGAAAGGGTCTAAAGCTCAGTCTGAATTACCTGGGTTGGTGTGCCAGGACATTTGCAATGGTCTAGAAAATATAAAAGTTCCAGTTACCAATATAGTTGATATTCCTCCTGTAGCACCTGAAGGCCTTACATATATCACAACTACTGAAGTTGCAAAAGGTGTGAAGATTCCACCACGTGCACATGGGTGCAATTGCCAGGGAAACTGTACTAATTCAAAGACTTGTTCCTGTGCTCAACTCAATGGTGGTGACTTCCCTTACGTTAGCAAAGATGGTGGAAGATTGGTTGAAGCAAAGGCTGTTGTGTTTGAGTGCGGTCCACAATGTGGCTGTGGACCAAGTTGTGTGAATCGCACATCTCAACGGGGATTGAAGTATCGACTTGAGGTGTTTCGGACACATGACAAAGGCTGGGCTGTTAGGTCTTGGGACTTTATTCCTTCTGGTGCACCAGTATGTGAATACATTGCGGTTCTTAGGAGGAATGATGAAATAGACAATATCTCAGAGAAAGAGAACGAGTATGTATTTGAAATTGATTGCTGGCAGACAATGAATGGAATTGGGGGAAGAGAGAAACGAATGGGGAATGTGGCTATTCCAAATAGTGATGCCATATCAGAAAGTGATCCAGAGTATTGCTACGATGCGGGTTCACGTGGCAATGTAGCTAGATATATTAATCATAGTTGTGAGCCGAACCTCTTTGTACAGTGTGTTTTGAGGGAGCATCATGATGTTAGGCTTGCTAGAATTGTGTTATTTGCTGCAGATAACATACCTCCATTGCAGGAACTTTCATATGACTATGGATATGAACTTGACAGCGTGGTTGGTCCCGATGGAAAAATAAAGAAGTTATTTTGCCGTTGTGGTGCAGCAGGCTGTAGAAAGCGTTTGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

696

Amino Acids

77.31

Weight (kDa)

8.53

Isoelectric Point (pI)

36.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	222 - 381	3.5e-52	SAD/SRA domain
Pre-SET	PF05033	413 - 512	1.7e-17	Pre-SET motif
SET	PF00856	531 - 665	4.1e-17	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1508
AccI	GTMKAC	1 cut(s)	629
AccIII	TCCGGA	1 cut(s)	362
AciI	CCGC	4 cut(s)	501, 1497, 1652, 1832
AclWI	GGATC	1 cut(s)	1805
AcoI	YGGCCR	1 cut(s)	886
AcsI	RAATTY	2 cut(s)	642, 791
AcuI	CTGAAG	6 cut(s)	35, 306, 629, 1145, 1320, 1347
AcvI	CACGTG	2 cut(s)	1358, 1841
AcyI	GRCGYC	1 cut(s)	120
AdeI	CACNNNGTG	2 cut(s)	1358, 1508
AfaI	GTAC	8 cut(s)	56, 82, 881, 1061, 1118, 1390, 1893, 2084
AfiI	CCNNNNNNNGG	2 cut(s)	77, 1508
AflII	CTTAAG	1 cut(s)	962
AgsI	TTSAA	9 cut(s)	281, 409, 430, 751, 796, 1398, 1472, 1555, 1715
AhlI	ACTAGT	1 cut(s)	160
AjnI	CCWGG	5 cut(s)	1062, 1135, 1210, 1224, 1377
AjuI	GAANNNNNNNTTGG	2 cut(s)	648, 680
AleI	CACNNNNGTG	1 cut(s)	1366
Alw21I	GWGCWC	3 cut(s)	1363, 1417, 1633
Alw26I	GTCTC	3 cut(s)	47, 407, 592
Alw44I	GTGCAC	2 cut(s)	1359, 1629
AlwI	GGATC	1 cut(s)	1805
Ama87I	CYCGRG	1 cut(s)	708
Aor13HI	TCCGGA	1 cut(s)	362
AoxI	GGCC	3 cut(s)	105, 886, 1303
ApaLI	GTGCAC	2 cut(s)	1359, 1629
ApeKI	GCWGC	4 cut(s)	5, 1141, 1949, 2060
ApoI	RAATTY	2 cut(s)	642, 791
AseI	ATTAAT	1 cut(s)	1863
Asp700I	GAANNNNTTC	1 cut(s)	71
AspLEI	GCGC	1 cut(s)	33
AspS9I	GGNCC	4 cut(s)	186, 1499, 1517, 2018
AsuC2I	CCSGG	2 cut(s)	35, 678
AsuHPI	GGTGA	4 cut(s)	49, 320, 515, 1442
AvaI	CYCGRG	1 cut(s)	708
AvaII	GGWCC	4 cut(s)	186, 1499, 1517, 2018
BaeGI	GKGCMC	2 cut(s)	1363, 1633
BalI	TGGCCA	1 cut(s)	888
BbrPI	CACGTG	2 cut(s)	1358, 1841
BbsI	GAAGAC	1 cut(s)	1124
Bbv12I	GWGCWC	3 cut(s)	1363, 1417, 1633
BbvI	GCAGC	3 cut(s)	1153, 1936, 2072
BccI	CCATC	3 cut(s)	1046, 1448, 2018
BceAI	ACGGC	2 cut(s)	133, 2034
BciT130I	CCWGG	5 cut(s)	1064, 1137, 1212, 1226, 1379
BclI	TGATCA	1 cut(s)	1152
BcnI	CCSGG	2 cut(s)	35, 678
BcoDI	GTCTC	3 cut(s)	47, 407, 592
BcuI	ACTAGT	1 cut(s)	160
BfaI	CTAG	7 cut(s)	84, 161, 1023, 1244, 1854, 1932, 2086
BfmI	CTRYAG	3 cut(s)	1290, 1950, 2068
BfoI	RGCGCY	1 cut(s)	34
BfrI	CTTAAG	1 cut(s)	962
BisI	GCNGC	4 cut(s)	6, 1142, 1950, 2061
BlsI	GCNGC	4 cut(s)	7, 1143, 1951, 2062
BmcAI	AGTACT	1 cut(s)	56
Bme1390I	CCNGG	7 cut(s)	35, 678, 1064, 1137, 1212, 1226, 1379
Bme18I	GGWCC	4 cut(s)	186, 1499, 1517, 2018
BmeT110I	CYCGRG	1 cut(s)	708
BmgT120I	GGNCC	4 cut(s)	186, 1499, 1517, 2018
BmiI	GGNNCC	2 cut(s)	187, 2020
BmrFI	CCNGG	7 cut(s)	35, 678, 1064, 1137, 1212, 1226, 1379
BmsI	GCATC	4 cut(s)	461, 1783, 1819, 1921
BpiI	GAAGAC	1 cut(s)	1124
BpmI	CTGGAG	3 cut(s)	47, 315, 503
Bpu10I	CCTNAGC	1 cut(s)	369
BpuEI	CTTGAG	1 cut(s)	1586
BpuMI	CCSGG	2 cut(s)	35, 678
BsaAI	YACGTR	2 cut(s)	1358, 1841
BsaHI	GRCGYC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	592
BsaJI	CCNNGG	6 cut(s)	141, 889, 1003, 1136, 1211, 1378
BsaWI	WCCGGW	1 cut(s)	362
BsaXI	ACNNNNNCTCC	2 cut(s)	357, 387
Bsc4I	CCNNNNNNNGG	2 cut(s)	77, 1508
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	4 cut(s)	749, 889, 1262, 1634
Bse3DI	GCAATG	4 cut(s)	1243, 1647, 1852, 1967
BseAI	TCCGGA	1 cut(s)	362
BseBI	CCWGG	5 cut(s)	1064, 1137, 1212, 1226, 1379
BseDI	CCNNGG	6 cut(s)	141, 889, 1003, 1136, 1211, 1378
BseGI	GGATG	2 cut(s)	331, 999
BseLI	CCNNNNNNNGG	2 cut(s)	77, 1508
BseMI	GCAATG	4 cut(s)	1243, 1647, 1852, 1967
BseMII	CTCAG	7 cut(s)	74, 246, 433, 543, 879, 1211, 1701
BseNI	ACTGG	4 cut(s)	749, 889, 1262, 1634
BseRI	GAGGAG	1 cut(s)	476
BseSI	GKGCMC	2 cut(s)	1363, 1633
BseXI	GCAGC	3 cut(s)	1153, 1936, 2072
BseYI	CCCAGC	2 cut(s)	1097, 1593
BsgI	GTGCAG	1 cut(s)	2079
Bsh1285I	CGRYCG	1 cut(s)	112
BshFI	GGCC	3 cut(s)	107, 888, 1305
BsiEI	CGRYCG	1 cut(s)	112
BsiHKAI	GWGCWC	3 cut(s)	1363, 1417, 1633
BsiHKCI	CYCGRG	1 cut(s)	708
BsiSI	CCGG	5 cut(s)	34, 46, 108, 363, 677
BslFI	GGGAC	4 cut(s)	199, 265, 1625, 2004
BslI	CCNNNNNNNGG	2 cut(s)	77, 1508
BsmAI	GTCTC	3 cut(s)	47, 407, 592
BsmBI	CGTCTC	1 cut(s)	407
BsmFI	GGGAC	4 cut(s)	199, 265, 1625, 2004
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	3 cut(s)	107, 888, 1305
Bso31I	GGTCTC	1 cut(s)	592
BsoBI	CYCGRG	1 cut(s)	708
Bsp1286I	GDGCHC	3 cut(s)	1363, 1417, 1633
Bsp13I	TCCGGA	1 cut(s)	362
Bsp1407I	TGTACA	2 cut(s)	879, 1891
Bsp143I	GATC	5 cut(s)	508, 604, 931, 1152, 1810
BspACI	CCGC	4 cut(s)	501, 1497, 1652, 1832
BspANI	GGCC	3 cut(s)	107, 888, 1305
BspCNI	CTCAG	7 cut(s)	73, 247, 432, 544, 878, 1210, 1700
BspEI	TCCGGA	1 cut(s)	362
BspHI	TCATGA	1 cut(s)	1915
BspLI	GGNNCC	2 cut(s)	187, 2020
BspMAI	CTGCAG	1 cut(s)	1954
BspPI	GGATC	1 cut(s)	1805
BspTI	CTTAAG	1 cut(s)	962
BspTNI	GGTCTC	1 cut(s)	592
BsrDI	GCAATG	4 cut(s)	1243, 1647, 1852, 1967
BsrFI	RCCGGY	1 cut(s)	107
BsrGI	TGTACA	2 cut(s)	879, 1891
BsrI	ACTGG	4 cut(s)	749, 889, 1262, 1634
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	6 cut(s)	141, 889, 1003, 1136, 1211, 1378
BssMI	GATC	5 cut(s)	508, 604, 931, 1152, 1810
BssNI	GRCGYC	1 cut(s)	120
BssT1I	CCWWGG	2 cut(s)	141, 889
Bst2UI	CCWGG	5 cut(s)	1064, 1137, 1212, 1226, 1379
Bst4CI	ACNGT	5 cut(s)	699, 1108, 1121, 1388, 1896
Bst6I	CTCTTC	5 cut(s)	83, 164, 453, 461, 1747
BstACI	GRCGYC	1 cut(s)	120
BstAFI	CTTAAG	1 cut(s)	962
BstAUI	TGTACA	2 cut(s)	879, 1891
BstBAI	YACGTR	2 cut(s)	1358, 1841
BstC8I	GCNNGC	3 cut(s)	1727, 1929, 2065
BstDSI	CCRYGG	1 cut(s)	1003
BstF5I	GGATG	2 cut(s)	331, 999
BstH2I	RGCGCY	1 cut(s)	34
BstHHI	GCGC	1 cut(s)	33
BstKTI	GATC	5 cut(s)	511, 607, 934, 1155, 1813
BstMAI	GTCTC	3 cut(s)	47, 407, 592
BstMBI	GATC	5 cut(s)	508, 604, 931, 1152, 1810
BstMCI	CGRYCG	1 cut(s)	112
BstNI	CCWGG	5 cut(s)	1064, 1137, 1212, 1226, 1379
BstSCI	CCNGG	7 cut(s)	33, 676, 1062, 1135, 1210, 1224, 1377
BstSFI	CTRYAG	3 cut(s)	1290, 1950, 2068
BstSLI	GKGCMC	2 cut(s)	1363, 1633
BstV1I	GCAGC	3 cut(s)	1153, 1936, 2072
BstV2I	GAAGAC	1 cut(s)	1124
BstXI	CCANNNNNNTGG	2 cut(s)	196, 532
BsuRI	GGCC	3 cut(s)	107, 888, 1305
BtgI	CCRYGG	1 cut(s)	1003
BtsCI	GGATG	2 cut(s)	331, 999
BtsIMutI	CAGTG	3 cut(s)	742, 882, 1901
Cac8I	GCNNGC	3 cut(s)	1727, 1929, 2065
CciI	TCATGA	1 cut(s)	1915
CfoI	GCGC	1 cut(s)	33
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	4 cut(s)	186, 1499, 1517, 2018
CseI	GACGC	3 cut(s)	109, 424, 1118
CsiI	ACCWGGT	1 cut(s)	1062
Csp6I	GTAC	8 cut(s)	55, 81, 880, 1060, 1117, 1389, 1892, 2083
CspCI	CAANNNNNGTGG	2 cut(s)	1438, 1473
CviAII	CATG	3 cut(s)	1364, 1583, 1916
CviQI	GTAC	8 cut(s)	55, 81, 880, 1060, 1117, 1389, 1892, 2083
DpnI	GATC	5 cut(s)	510, 606, 933, 1154, 1812
DpnII	GATC	5 cut(s)	508, 604, 931, 1152, 1810
DraIII	CACNNNGTG	2 cut(s)	1358, 1508
EaeI	YGGCCR	1 cut(s)	886
Eam1104I	CTCTTC	5 cut(s)	83, 164, 453, 461, 1747
EarI	CTCTTC	5 cut(s)	83, 164, 453, 461, 1747
Eco130I	CCWWGG	2 cut(s)	141, 889
Eco147I	AGGCCT	1 cut(s)	1305
Eco31I	GGTCTC	1 cut(s)	592
Eco32I	GATATC	1 cut(s)	763
Eco47I	GGWCC	4 cut(s)	186, 1499, 1517, 2018
Eco57I	CTGAAG	6 cut(s)	35, 306, 629, 1145, 1320, 1347
Eco72I	CACGTG	2 cut(s)	1358, 1841
Eco88I	CYCGRG	1 cut(s)	708
EcoRII	CCWGG	5 cut(s)	1062, 1135, 1210, 1224, 1377
EcoRV	GATATC	1 cut(s)	763
EcoT14I	CCWWGG	2 cut(s)	141, 889
ErhI	CCWWGG	2 cut(s)	141, 889
Esp3I	CGTCTC	1 cut(s)	407
FaeI	CATG	3 cut(s)	1367, 1586, 1919
FaqI	GGGAC	4 cut(s)	199, 265, 1625, 2004
FatI	CATG	3 cut(s)	1363, 1582, 1915
FauI	CCCGC	1 cut(s)	1825
FauNDI	CATATG	2 cut(s)	1048, 1984
FbaI	TGATCA	1 cut(s)	1152
FblI	GTMKAC	1 cut(s)	629
Fnu4HI	GCNGC	4 cut(s)	6, 1142, 1950, 2061
FokI	GGATG	2 cut(s)	338, 986
Fsp4HI	GCNGC	4 cut(s)	6, 1142, 1950, 2061
FspBI	CTAG	7 cut(s)	84, 161, 1023, 1244, 1854, 1932, 2086
GlaI	GCGC	1 cut(s)	32
GluI	GCNGC	4 cut(s)	6, 1142, 1950, 2061
GsaI	CCCAGC	2 cut(s)	1101, 1597
GsuI	CTGGAG	3 cut(s)	47, 315, 503
HaeII	RGCGCY	1 cut(s)	34
HaeIII	GGCC	3 cut(s)	107, 888, 1305
HapII	CCGG	5 cut(s)	34, 46, 108, 363, 677
HgaI	GACGC	3 cut(s)	109, 424, 1118
HhaI	GCGC	1 cut(s)	33
Hin1I	GRCGYC	1 cut(s)	120
Hin1II	CATG	3 cut(s)	1367, 1586, 1919
Hin6I	GCGC	1 cut(s)	31
HinP1I	GCGC	1 cut(s)	31
HincII	GTYRAC	1 cut(s)	630
HindII	GTYRAC	1 cut(s)	630
HinfI	GANTC	7 cut(s)	17, 40, 98, 290, 996, 1348, 1531
HpaII	CCGG	5 cut(s)	34, 46, 108, 363, 677
HphI	GGTGA	4 cut(s)	49, 320, 515, 1442
Hpy166II	GTNNAC	9 cut(s)	630, 880, 882, 1104, 1361, 1502, 1517, 1631, 1838
Hpy188III	TCNNGA	9 cut(s)	26, 294, 363, 455, 708, 1244, 1814, 1916, 2021
Hpy8I	GTNNAC	9 cut(s)	630, 880, 882, 1104, 1361, 1502, 1517, 1631, 1838
Hpy99I	CGWCG	1 cut(s)	125
HpyCH4III	ACNGT	5 cut(s)	699, 1108, 1121, 1388, 1896
HpyCH4IV	ACGT	5 cut(s)	337, 919, 1357, 1443, 1840
HpySE526I	ACGT	5 cut(s)	337, 919, 1357, 1443, 1840
Hsp92I	GRCGYC	1 cut(s)	120
Hsp92II	CATG	3 cut(s)	1367, 1586, 1919
HspAI	GCGC	1 cut(s)	31
Kpn2I	TCCGGA	1 cut(s)	362
Ksp22I	TGATCA	1 cut(s)	1152
Kzo9I	GATC	5 cut(s)	508, 604, 931, 1152, 1810
LmnI	GCTCC	5 cut(s)	28, 361, 365, 976, 1909
Lsp1109I	GCAGC	3 cut(s)	1153, 1936, 2072
LweI	GCATC	4 cut(s)	461, 1783, 1819, 1921
MabI	ACCWGGT	1 cut(s)	1062
MaeI	CTAG	7 cut(s)	84, 161, 1023, 1244, 1854, 1932, 2086
MaeII	ACGT	5 cut(s)	337, 919, 1357, 1443, 1840
MaeIII	GTNAC	3 cut(s)	1016, 1264, 1430
MalI	GATC	5 cut(s)	510, 606, 933, 1154, 1812
MboI	GATC	5 cut(s)	508, 604, 931, 1152, 1810
MfeI	CAATTG	3 cut(s)	663, 813, 1372
MhlI	GDGCHC	3 cut(s)	1363, 1417, 1633
MlsI	TGGCCA	1 cut(s)	888
MluNI	TGGCCA	1 cut(s)	888
MlyI	GAGTC	2 cut(s)	49, 1005
Mox20I	TGGCCA	1 cut(s)	888
MroI	TCCGGA	1 cut(s)	362
MroXI	GAANNNNTTC	1 cut(s)	71
MscI	TGGCCA	1 cut(s)	888
MseI	TTAA	4 cut(s)	147, 963, 1113, 1863
MslI	CAYNNNNRTG	5 cut(s)	1014, 1366, 1636, 1872, 1917
Msp20I	TGGCCA	1 cut(s)	888
MspCI	CTTAAG	1 cut(s)	962
MspI	CCGG	5 cut(s)	34, 46, 108, 363, 677
MspR9I	CCNGG	7 cut(s)	35, 678, 1064, 1137, 1212, 1226, 1379
MunI	CAATTG	3 cut(s)	663, 813, 1372
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	5 cut(s)	1064, 1137, 1212, 1226, 1379
NciI	CCSGG	2 cut(s)	35, 678
NdeI	CATATG	2 cut(s)	1048, 1984
NdeII	GATC	5 cut(s)	508, 604, 931, 1152, 1810
NlaIII	CATG	3 cut(s)	1367, 1586, 1919
NlaIV	GGNNCC	2 cut(s)	187, 2020
NmuCI	GTSAC	2 cut(s)	1016, 1430
OliI	CACNNNNGTG	1 cut(s)	1366
PaeR7I	CTCGAG	1 cut(s)	708
PagI	TCATGA	1 cut(s)	1915
PceI	AGGCCT	1 cut(s)	1305
PctI	GAATGC	1 cut(s)	503
PdmI	GAANNNNTTC	1 cut(s)	71
PfeI	GAWTC	5 cut(s)	17, 98, 290, 1348, 1531
PflMI	CCANNNNNTGG	1 cut(s)	1508
PkrI	GCNGC	4 cut(s)	7, 1143, 1951, 2062
PleI	GAGTC	2 cut(s)	48, 1004
PmaCI	CACGTG	2 cut(s)	1358, 1841
PmlI	CACGTG	2 cut(s)	1358, 1841
PpsI	GAGTC	2 cut(s)	48, 1004
Ppu21I	YACGTR	2 cut(s)	1358, 1841
PshBI	ATTAAT	1 cut(s)	1863
Psp6I	CCWGG	5 cut(s)	1062, 1135, 1210, 1224, 1377
PspCI	CACGTG	2 cut(s)	1358, 1841
PspFI	CCCAGC	2 cut(s)	1097, 1593
PspGI	CCWGG	5 cut(s)	1062, 1135, 1210, 1224, 1377
PspN4I	GGNNCC	2 cut(s)	187, 2020
PspPI	GGNCC	4 cut(s)	186, 1499, 1517, 2018
PstI	CTGCAG	1 cut(s)	1954
RsaI	GTAC	8 cut(s)	56, 82, 881, 1061, 1118, 1390, 1893, 2084
RsaNI	GTAC	8 cut(s)	55, 81, 880, 1060, 1117, 1389, 1892, 2083
RseI	CAYNNNNRTG	5 cut(s)	1014, 1366, 1636, 1872, 1917
SalI	GTCGAC	1 cut(s)	628
SaqAI	TTAA	4 cut(s)	147, 963, 1113, 1863
SatI	GCNGC	4 cut(s)	6, 1142, 1950, 2061
Sau3AI	GATC	5 cut(s)	508, 604, 931, 1152, 1810
Sau96I	GGNCC	4 cut(s)	186, 1499, 1517, 2018
ScaI	AGTACT	1 cut(s)	56
SchI	GAGTC	2 cut(s)	49, 1005
ScrFI	CCNGG	7 cut(s)	35, 678, 1064, 1137, 1212, 1226, 1379
SduI	GDGCHC	3 cut(s)	1363, 1417, 1633
SexAI	ACCWGGT	1 cut(s)	1062
SfaNI	GCATC	4 cut(s)	461, 1783, 1819, 1921
SfcI	CTRYAG	3 cut(s)	1290, 1950, 2068
Sfr274I	CTCGAG	1 cut(s)	708
SinI	GGWCC	4 cut(s)	186, 1499, 1517, 2018
SlaI	CTCGAG	1 cut(s)	708
SmiMI	CAYNNNNRTG	5 cut(s)	1014, 1366, 1636, 1872, 1917
SmlI	CTYRAG	3 cut(s)	708, 962, 1565
SmoI	CTYRAG	3 cut(s)	708, 962, 1565
SpeI	ACTAGT	1 cut(s)	160
SseBI	AGGCCT	1 cut(s)	1305
SsiI	CCGC	4 cut(s)	501, 1497, 1652, 1832
SspMI	CTAG	7 cut(s)	84, 161, 1023, 1244, 1854, 1932, 2086
StuI	AGGCCT	1 cut(s)	1305
StyD4I	CCNGG	7 cut(s)	33, 676, 1062, 1135, 1210, 1224, 1377
StyI	CCWWGG	2 cut(s)	141, 889
TaaI	ACNGT	5 cut(s)	699, 1108, 1121, 1388, 1896
TaiI	ACGT	5 cut(s)	340, 922, 1360, 1446, 1843
TaqI	TCGA	5 cut(s)	112, 213, 629, 709, 1561
TatI	WGTACW	5 cut(s)	54, 879, 1388, 1891, 2082
TfiI	GAWTC	5 cut(s)	17, 98, 290, 1348, 1531
Tru1I	TTAA	4 cut(s)	147, 963, 1113, 1863
Tru9I	TTAA	4 cut(s)	147, 963, 1113, 1863
TscAI	CASTG	3 cut(s)	749, 889, 1901
TseFI	GTSAC	2 cut(s)	1016, 1430
TseI	GCWGC	4 cut(s)	5, 1141, 1949, 2060
Tsp45I	GTSAC	2 cut(s)	1016, 1430
TspDTI	ATGAA	9 cut(s)	237, 725, 861, 885, 1058, 1686, 1751, 1971, 2013
TspGWI	ACGGA	2 cut(s)	110, 992
TspRI	CASTG	3 cut(s)	749, 889, 1901
Van91I	CCANNNNNTGG	1 cut(s)	1508
Vha464I	CTTAAG	1 cut(s)	962
VneI	GTGCAC	2 cut(s)	1359, 1629
VpaK11BI	GGWCC	4 cut(s)	186, 1499, 1517, 2018
VspI	ATTAAT	1 cut(s)	1863
XapI	RAATTY	2 cut(s)	642, 791
XbaI	TCTAGA	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	749
XhoI	CTCGAG	1 cut(s)	708
XmiI	GTMKAC	1 cut(s)	629
XmnI	GAANNNNTTC	1 cut(s)	71
XspI	CTAG	7 cut(s)	84, 161, 1023, 1244, 1854, 1932, 2086
ZrmI	AGTACT	1 cut(s)	56

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.