Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Forward (+)

218441 .. 223972

Gene Structure 5532 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00076350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGGTAGTCCAATCGCTGGAGGGCGTGGGTTCCGTTCAGAGCTCCATCGACGTTGCTGCAAACCCACATTCCGAGGACAATTCCTCGCCGAAGAAGAGGAGAGTCAGCTCTCGCCTCCAGGTCAAGCAGAAACCCCAAAAGGAACTTCTCGTCCGCCAGAGAGTGGAATTACTCGATGACAACGAACAAGGCCCCACAAAGAAACAAGCAAATGCCAGGGGTAGGCAAACCGGAGAGGTCGCCGACTCGGAGGAGCTCCCAAAGGCCACTGACTCGGTTGAGAAGAGTGACCGTGTTAGGGTCAAAGAGACCCTCAGGTTGTTCAACAAGCATTATCTCTATTTCGTACAGGTAAACCTGCCCTCCCCTTTGTGCTCCCAATTTCAATTTTGTCATGTATCTGTGTTGGAAGCAGATGATGAACTCTTAGCAATCCAATTTCAGGAAGAAGAGAAGAGGGCGGTGAAAGCAGAAGCTCAGAAGAAAGCTTCCAGAGCTGCAAAGAGAGGTGCAAACAAATCTAAGAAGGGTGATTTGAAGGCAGATACAAAGATGAATGACGAAAAAGAAATTTTGTTTCCTTCTAAAAGATTTGGAAGCATTCCAGGTATTGATGTCGGGCATCAGTTCTATTCTCGGGCTGAAATGGTTGCTGTTGGTTTCCACAGCCACTGGCTGAACGGGATTGATTATATGGGCCAGTCCTATAGTAAAGGGAAGTACAGCAACTATACAATGCCACTTGCAGTTGCTATTGTTATATCAGGCATGTATGAAGATGATTTGGACAATGCTGAGGAAGTTGTGTATACTGGTCAAGGTGGACATAATTTGACAGGTGATAAGCGTCAATTTCGAGATCAAGTTCTAGAACGTGGTAATTTGGCACTCAAGAATTGTGTGGAACAAGATGTACCTGTTAGAGTAGTTCGTGGCCATGATTGTAAAAGTAGTTACTGTGGCAAAATTTACACTTATGACGGACTGTACAAGGTTGTGAAGTATTGGGCAGAGAAGGGTATTTCTGGATTTACTGTTTTTAAGTATCGTCTTAAGCGGCTTGAGGGGCAGCCACTGTTAACCACCAACCAGGTTCAATTTATTAATGGACGTGTACCACAATCTATATCGGAAATACGCGGGTTGGTGTGCGAGGACATAACTGGGGGTCTAGAGGATATTGCCATTCCAGCTACCAATTTGGTCGATGATCCGCCTGTTGCTCCTACAGGCAAGTTGATCATGTTTATGGATTGCAATGGTGGAACTTTTTCATGGATCTTTTTATATCCCTCAATTTCAGGTTACACGTATTGCAAGTCTATTCAAGTTGCGAAAAACGTGAAGCTTCCCACAGATGCTACTGGATGCAATTGCAAAGGAAGTTGTGTAGATTCCAAGACCTGCGAATGTGCCAAACTTAACGGCTCTGACTTTCCGTATGTCCATCGTGATGGTGGCAGATTAATTGAAGCCAAGGATGTAGTGTTTGAATGTGGGCCAAAATGTGGTTGTGGACCTTCTTGTGTTTTCCGAACGCCCATGAAAGGGTGGGCAGTTAGATCTTGGGATTTTATACCTGCTGGGGCACCAGTTTGTGAGTATGTAGGAATACTTCGCAGGACAGAAGATGTGGATAGTGCCTCGGAGAATTATTACATTTTTGACATTGATTGCTTGCAAACAATGAAGGGGCTTGATGGGAGGGAGAGGCGGTCACAAGCTGTATGCATACCAACAGTTAATTCACTGGAGAGGCCTGATGATCAGAGATCTGATAATGTGCCAGAGTACTGCATTGATGCCGGTTCTAATGGAAATATTGCCAGATTTATAAACCACAGTTGTGAGCCTAATCTGTTTGTTCAGTGTGTCTTGAGTTCACACCATGACATCAAACTAGCTCGAGTAATGCTGTTTGCAGCAGACAACATACCTCCTTTGCAGGAGCTGACATATGACTACGGTTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAGGTAAAGAAGATGTTTTGCCACTGTGGTGCAGCAGGTTGCAGGAGACGCTTATGTGAAGAGGAAGTTGACAATTTTAATGAAAAGCAAGTAATCTTGCTCCGCGTCGGATGGATTGTTCATTTAACTGCAGTTCAACCTTATTCTTTATTTATGCGCCCAAAATGTGGGTTGGTTAATAGAGCTGCACAAGTCAGCAATACCAGTCAAGTGATTGACTCGGAAGTTTCTTCAACTGCTCAAGTAATAGCAGTTGAATTGTTTTGTTTTGTAGGGGCAGCTGAAACCTCTGCCACAGCAGGACCAACCCTACGCAGCTGTCCGCAGTTGACAAAGGATTCTTCAGATCTTAGTGCTTCCAGGGCCAATTGCACTGCTATAAGGGTTGAGCTCAAGCGTGGGAAACTCAAGGGATTAGGGCCAACAATAGTAAAGAGAGTCATACTCGCATGGATTATGACAACCAGATATGCAAAACTAATGGGTAAACAACGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

832

Amino Acids

92.33

Weight (kDa)

8.38

Isoelectric Point (pI)

43.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	197 - 357	8.7e-52	SAD/SRA domain
Pre-SET	PF05033	434 - 512	2e-13	Pre-SET motif
SET	PF00856	517 - 656	8.4e-20	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1835
Acc36I	ACCTGC	4 cut(s)	366, 1412, 1588, 2027
AccB1I	GGYRCC	1 cut(s)	1588
AccB7I	CCANNNNNTGG	4 cut(s)	16, 163, 1508, 2168
AccI	GTMKAC	1 cut(s)	809
AccII	CGCG	2 cut(s)	1140, 2106
AciI	CCGC	8 cut(s)	154, 461, 1057, 1140, 1214, 1714, 2104, 2324
AclI	AACGTT	1 cut(s)	2494
AclWI	GGATC	2 cut(s)	1205, 1286
AcoI	YGGCCR	1 cut(s)	934
AcsI	RAATTY	2 cut(s)	570, 966
AcuI	CTGAAG	1 cut(s)	2328
AfaI	GTAC	6 cut(s)	348, 722, 915, 989, 1116, 1793
AfiI	CCNNNNNNNGG	9 cut(s)	16, 163, 222, 298, 442, 1508, 1547, 1548, 2168
AflII	CTTAAG	1 cut(s)	1052
AflIII	ACRYGT	2 cut(s)	1111, 1308
AjiI	CACGTC	1 cut(s)	1112
AjnI	CCWGG	5 cut(s)	117, 215, 604, 1089, 2360
AjuI	GAANNNNNNNTTGG	4 cut(s)	129, 161, 1729, 1761
AleI	CACNNNNGTG	2 cut(s)	1845, 2028
AloI	GAACNNNNNNTCC	4 cut(s)	135, 167, 2103, 2135
Alw21I	GWGCWC	4 cut(s)	44, 258, 377, 2394
Alw26I	GTCTC	2 cut(s)	302, 2041
AlwI	GGATC	2 cut(s)	1205, 1286
AlwNI	CAGNNNCTG	3 cut(s)	672, 1075, 1951
Ama87I	CYCGRG	2 cut(s)	636, 1905
AoxI	GGCC	8 cut(s)	190, 264, 697, 934, 1499, 1757, 2364, 2420
ApeKI	GCWGC	8 cut(s)	56, 497, 1069, 1922, 2033, 2186, 2279, 2316
ApoI	RAATTY	2 cut(s)	570, 966
AseI	ATTAAT	2 cut(s)	1104, 1466
Asp700I	GAANNNNTTC	1 cut(s)	1270
AspLEI	GCGC	1 cut(s)	2160
AspS9I	GGNCC	8 cut(s)	191, 697, 1499, 1517, 1991, 2303, 2364, 2420
AsuHPI	GGTGA	3 cut(s)	475, 542, 851
AvaI	CYCGRG	2 cut(s)	636, 1905
AvaII	GGWCC	3 cut(s)	1517, 1991, 2303
AxyI	CCTNAGG	1 cut(s)	314
BaeGI	GKGCMC	1 cut(s)	1591
BalI	TGGCCA	1 cut(s)	936
BanI	GGYRCC	1 cut(s)	1588
BanII	GRGCYC	3 cut(s)	44, 258, 2394
BarI	GAAGNNNNNNTAC	2 cut(s)	1599, 1631
Bbv12I	GWGCWC	4 cut(s)	44, 258, 377, 2394
BbvCI	CCTCAGC	1 cut(s)	795
BbvI	GCAGC	8 cut(s)	43, 484, 1081, 1934, 2045, 2173, 2291, 2328
BccI	CCATC	6 cut(s)	53, 1448, 1455, 1694, 1991, 2106
BceAI	ACGGC	1 cut(s)	1441
BcgI	CGANNNNNNTGC	2 cut(s)	38, 72
BciT130I	CCWGG	5 cut(s)	119, 217, 606, 1091, 2362
BclI	TGATCA	2 cut(s)	1239, 1765
BcoDI	GTCTC	2 cut(s)	302, 2041
BfaI	CTAG	3 cut(s)	869, 1172, 1901
BfmI	CTRYAG	3 cut(s)	706, 1227, 2130
BfrI	CTTAAG	1 cut(s)	1052
BfuAI	ACCTGC	4 cut(s)	366, 1412, 1588, 2027
BglII	AGATCT	3 cut(s)	1562, 1772, 2347
BisI	GCNGC	9 cut(s)	57, 498, 1058, 1070, 1923, 2034, 2187, 2280, 2317
BlsI	GCNGC	9 cut(s)	58, 499, 1059, 1071, 1924, 2035, 2188, 2281, 2318
BmcAI	AGTACT	1 cut(s)	1793
Bme1390I	CCNGG	5 cut(s)	119, 217, 606, 1091, 2362
Bme18I	GGWCC	3 cut(s)	1517, 1991, 2303
BmeT110I	CYCGRG	2 cut(s)	636, 1905
BmgBI	CACGTC	1 cut(s)	1112
BmgT120I	GGNCC	8 cut(s)	191, 697, 1499, 1517, 1991, 2303, 2364, 2420
BmiI	GGNNCC	4 cut(s)	31, 193, 1590, 1992
BmrFI	CCNGG	5 cut(s)	119, 217, 606, 1091, 2362
BmrI	ACTGGG	1 cut(s)	1173
BmsI	GCATC	4 cut(s)	631, 1348, 1358, 1792
BmuI	ACTGGG	1 cut(s)	1173
BplI	GAGNNNNNCTC	2 cut(s)	2430, 2462
BpmI	CTGGAG	3 cut(s)	38, 101, 1772
Bpu10I	CCTNAGC	1 cut(s)	795
BpuEI	CTTGAG	6 cut(s)	875, 1082, 1897, 2226, 2378, 2393
BsaAI	YACGTR	1 cut(s)	1311
BsaI	GGTCTC	1 cut(s)	302
BsaJI	CCNNGG	5 cut(s)	72, 216, 1476, 1644, 2361
BsaWI	WCCGGW	1 cut(s)	230
BsaXI	ACNNNNNCTCC	4 cut(s)	347, 377, 1700, 1730
Bsc4I	CCNNNNNNNGG	9 cut(s)	16, 163, 222, 298, 442, 1508, 1547, 1548, 2168
Bse118I	RCCGGY	1 cut(s)	1805
Bse1I	ACTGG	8 cut(s)	677, 700, 817, 1168, 1369, 1592, 1755, 2205
Bse21I	CCTNAGG	1 cut(s)	314
Bse3DI	GCAATG	1 cut(s)	1264
BseBI	CCWGG	5 cut(s)	119, 217, 606, 1091, 2362
BseDI	CCNNGG	5 cut(s)	72, 216, 1476, 1644, 2361
BseGI	GGATG	3 cut(s)	1373, 1486, 2117
BseLI	CCNNNNNNNGG	9 cut(s)	16, 163, 222, 298, 442, 1508, 1547, 1548, 2168
BseMI	GCAATG	1 cut(s)	1264
BseMII	CTCAG	3 cut(s)	328, 491, 786
BseNI	ACTGG	8 cut(s)	677, 700, 817, 1168, 1369, 1592, 1755, 2205
BseRI	GAGGAG	2 cut(s)	112, 266
BseSI	GKGCMC	1 cut(s)	1591
BseXI	GCAGC	8 cut(s)	43, 484, 1081, 1934, 2045, 2173, 2291, 2328
BseYI	CCCAGC	1 cut(s)	1583
BsgI	GTGCAG	2 cut(s)	2052, 2172
Bsh1236I	CGCG	2 cut(s)	1140, 2106
BshFI	GGCC	8 cut(s)	192, 266, 699, 936, 1501, 1759, 2366, 2422
BshNI	GGYRCC	1 cut(s)	1588
BsiHKAI	GWGCWC	4 cut(s)	44, 258, 377, 2394
BsiHKCI	CYCGRG	2 cut(s)	636, 1905
BsiSI	CCGG	2 cut(s)	231, 1806
BslI	CCNNNNNNNGG	9 cut(s)	16, 163, 222, 298, 442, 1508, 1547, 1548, 2168
BsmAI	GTCTC	2 cut(s)	302, 2041
BsmBI	CGTCTC	1 cut(s)	2041
BsmI	GAATGC	1 cut(s)	600
BsnI	GGCC	8 cut(s)	192, 266, 699, 936, 1501, 1759, 2366, 2422
Bso31I	GGTCTC	1 cut(s)	302
BsoBI	CYCGRG	2 cut(s)	636, 1905
Bsp1286I	GDGCHC	5 cut(s)	44, 258, 377, 1591, 2394
Bsp1407I	TGTACA	1 cut(s)	987
Bsp143I	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
BspACI	CCGC	8 cut(s)	154, 461, 1057, 1140, 1214, 1714, 2104, 2324
BspANI	GGCC	8 cut(s)	192, 266, 699, 936, 1501, 1759, 2366, 2422
BspCNI	CTCAG	3 cut(s)	327, 490, 787
BspFNI	CGCG	2 cut(s)	1140, 2106
BspLI	GGNNCC	4 cut(s)	31, 193, 1590, 1992
BspMAI	CTGCAG	1 cut(s)	2134
BspMI	ACCTGC	4 cut(s)	366, 1412, 1588, 2027
BspPI	GGATC	2 cut(s)	1205, 1286
BspT107I	GGYRCC	1 cut(s)	1588
BspTI	CTTAAG	1 cut(s)	1052
BspTNI	GGTCTC	1 cut(s)	302
BsrDI	GCAATG	1 cut(s)	1264
BsrFI	RCCGGY	1 cut(s)	1805
BsrGI	TGTACA	1 cut(s)	987
BsrI	ACTGG	8 cut(s)	677, 700, 817, 1168, 1369, 1592, 1755, 2205
BssAI	RCCGGY	1 cut(s)	1805
BssECI	CCNNGG	5 cut(s)	72, 216, 1476, 1644, 2361
BssMI	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
BssNAI	GTATAC	1 cut(s)	810
BssT1I	CCWWGG	1 cut(s)	1476
Bst1107I	GTATAC	1 cut(s)	810
Bst2UI	CCWGG	5 cut(s)	119, 217, 606, 1091, 2362
Bst4CI	ACNGT	9 cut(s)	293, 959, 987, 1036, 1077, 1741, 1844, 1967, 2027
Bst6I	CTCTTC	5 cut(s)	89, 278, 444, 449, 2055
BstAFI	CTTAAG	1 cut(s)	1052
BstAUI	TGTACA	1 cut(s)	987
BstBAI	YACGTR	1 cut(s)	1311
BstC8I	GCNNGC	1 cut(s)	1679
BstDEI	CTNAG	6 cut(s)	314, 427, 477, 522, 795, 2351
BstF5I	GGATG	3 cut(s)	1373, 1486, 2117
BstFNI	CGCG	2 cut(s)	1140, 2106
BstHHI	GCGC	1 cut(s)	2160
BstKTI	GATC	8 cut(s)	862, 1213, 1242, 1281, 1565, 1768, 1775, 2350
BstMAI	GTCTC	2 cut(s)	302, 2041
BstMBI	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
BstMWI	GCNNNNNNNGC	6 cut(s)	467, 494, 1066, 1190, 2049, 2363
BstNI	CCWGG	5 cut(s)	119, 217, 606, 1091, 2362
BstNSI	RCATGY	1 cut(s)	772
BstSCI	CCNGG	5 cut(s)	117, 215, 604, 1089, 2360
BstSFI	CTRYAG	3 cut(s)	706, 1227, 2130
BstSLI	GKGCMC	1 cut(s)	1591
BstUI	CGCG	2 cut(s)	1140, 2106
BstV1I	GCAGC	8 cut(s)	43, 484, 1081, 1934, 2045, 2173, 2291, 2328
BstX2I	RGATCY	4 cut(s)	1278, 1562, 1772, 2347
BstXI	CCANNNNNNTGG	1 cut(s)	1454
BstYI	RGATCY	4 cut(s)	1278, 1562, 1772, 2347
BstZ17I	GTATAC	1 cut(s)	810
Bsu36I	CCTNAGG	1 cut(s)	314
BsuRI	GGCC	8 cut(s)	192, 266, 699, 936, 1501, 1759, 2366, 2422
BtrI	CACGTC	1 cut(s)	1112
BtsCI	GGATG	3 cut(s)	1373, 1486, 2117
BtsI	GCAGTG	1 cut(s)	2373
BtsIMutI	CAGTG	7 cut(s)	267, 670, 1073, 1748, 1874, 2023, 2373
BveI	ACCTGC	4 cut(s)	366, 1412, 1588, 2027
Cac8I	GCNNGC	1 cut(s)	1679
CaiI	CAGNNNCTG	3 cut(s)	672, 1075, 1951
CfoI	GCGC	1 cut(s)	2160
Cfr10I	RCCGGY	1 cut(s)	1805
Cfr13I	GGNCC	8 cut(s)	191, 697, 1499, 1517, 1991, 2303, 2364, 2420
CseI	GACGC	3 cut(s)	836, 2058, 2095
CsiI	ACCWGGT	1 cut(s)	1089
Csp6I	GTAC	6 cut(s)	347, 721, 914, 988, 1115, 1792
CviAII	CATG	8 cut(s)	395, 769, 938, 1243, 1275, 1543, 1889, 2451
CviQI	GTAC	6 cut(s)	347, 721, 914, 988, 1115, 1792
DdeI	CTNAG	6 cut(s)	314, 427, 477, 522, 795, 2351
DpnI	GATC	8 cut(s)	861, 1212, 1241, 1280, 1564, 1767, 1774, 2349
DpnII	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
EaeI	YGGCCR	1 cut(s)	934
Eam1104I	CTCTTC	5 cut(s)	89, 278, 444, 449, 2055
EarI	CTCTTC	5 cut(s)	89, 278, 444, 449, 2055
EciI	GGCGGA	2 cut(s)	143, 1203
Ecl136II	GAGCTC	3 cut(s)	42, 256, 2392
Eco130I	CCWWGG	1 cut(s)	1476
Eco147I	AGGCCT	1 cut(s)	1759
Eco24I	GRGCYC	3 cut(s)	44, 258, 2394
Eco31I	GGTCTC	1 cut(s)	302
Eco47I	GGWCC	3 cut(s)	1517, 1991, 2303
Eco53kI	GAGCTC	3 cut(s)	42, 256, 2392
Eco57I	CTGAAG	1 cut(s)	2328
Eco81I	CCTNAGG	1 cut(s)	314
Eco88I	CYCGRG	2 cut(s)	636, 1905
EcoICRI	GAGCTC	3 cut(s)	42, 256, 2392
EcoO109I	RGGNCCY	2 cut(s)	191, 1991
EcoRII	CCWGG	5 cut(s)	117, 215, 604, 1089, 2360
EcoT14I	CCWWGG	1 cut(s)	1476
EcoT22I	ATGCAT	1 cut(s)	1733
EcoT38I	GRGCYC	3 cut(s)	44, 258, 2394
ErhI	CCWWGG	1 cut(s)	1476
Esp3I	CGTCTC	1 cut(s)	2041
FaeI	CATG	8 cut(s)	398, 772, 941, 1246, 1278, 1546, 1892, 2454
FatI	CATG	8 cut(s)	394, 768, 937, 1242, 1274, 1542, 1888, 2450
FauI	CCCGC	1 cut(s)	1133
FauNDI	CATATG	1 cut(s)	1957
FbaI	TGATCA	2 cut(s)	1239, 1765
FblI	GTMKAC	1 cut(s)	809
Fnu4HI	GCNGC	9 cut(s)	57, 498, 1058, 1070, 1923, 2034, 2187, 2280, 2317
FokI	GGATG	3 cut(s)	1380, 1493, 2124
FriOI	GRGCYC	3 cut(s)	44, 258, 2394
Fsp4HI	GCNGC	9 cut(s)	57, 498, 1058, 1070, 1923, 2034, 2187, 2280, 2317
FspBI	CTAG	3 cut(s)	869, 1172, 1901
GlaI	GCGC	1 cut(s)	2159
GluI	GCNGC	9 cut(s)	57, 498, 1058, 1070, 1923, 2034, 2187, 2280, 2317
GsaI	CCCAGC	1 cut(s)	1587
GsuI	CTGGAG	3 cut(s)	38, 101, 1772
HaeIII	GGCC	8 cut(s)	192, 266, 699, 936, 1501, 1759, 2366, 2422
HapII	CCGG	2 cut(s)	231, 1806
HgaI	GACGC	3 cut(s)	836, 2058, 2095
HhaI	GCGC	1 cut(s)	2160
Hin1II	CATG	8 cut(s)	398, 772, 941, 1246, 1278, 1546, 1892, 2454
Hin6I	GCGC	1 cut(s)	2158
HinP1I	GCGC	1 cut(s)	2158
HincII	GTYRAC	3 cut(s)	1080, 2071, 2331
HindII	GTYRAC	3 cut(s)	1080, 2071, 2331
HindIII	AAGCTT	2 cut(s)	486, 1346
HinfI	GANTC	7 cut(s)	102, 245, 272, 1394, 2219, 2339, 2439
HpaI	GTTAAC	1 cut(s)	1080
HpaII	CCGG	2 cut(s)	231, 1806
HphI	GGTGA	3 cut(s)	475, 542, 851
Hpy99I	CGWCG	2 cut(s)	53, 2111
HpyAV	CCTTC	7 cut(s)	520, 532, 591, 1009, 1530, 1684, 1996
HpyCH4III	ACNGT	9 cut(s)	293, 959, 987, 1036, 1077, 1741, 1844, 1967, 2027
HpyCH4IV	ACGT	6 cut(s)	51, 874, 1111, 1310, 1341, 2494
HpyF10VI	GCNNNNNNNGC	6 cut(s)	467, 494, 1066, 1190, 2049, 2363
HpyF3I	CTNAG	6 cut(s)	314, 427, 477, 522, 795, 2351
HpySE526I	ACGT	6 cut(s)	51, 874, 1111, 1310, 1341, 2494
Hsp92II	CATG	8 cut(s)	398, 772, 941, 1246, 1278, 1546, 1892, 2454
HspAI	GCGC	1 cut(s)	2158
Ksp22I	TGATCA	2 cut(s)	1239, 1765
KspAI	GTTAAC	1 cut(s)	1080
Kzo9I	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
LmnI	GCTCC	7 cut(s)	47, 253, 261, 380, 1228, 1948, 2106
Lsp1109I	GCAGC	8 cut(s)	43, 484, 1081, 1934, 2045, 2173, 2291, 2328
LweI	GCATC	4 cut(s)	631, 1348, 1358, 1792
MabI	ACCWGGT	1 cut(s)	1089
MaeI	CTAG	3 cut(s)	869, 1172, 1901
MaeII	ACGT	6 cut(s)	51, 874, 1111, 1310, 1341, 2494
MaeIII	GTNAC	4 cut(s)	287, 953, 1304, 1716
MalI	GATC	8 cut(s)	861, 1212, 1241, 1280, 1564, 1767, 1774, 2349
MboI	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
MfeI	CAATTG	2 cut(s)	1372, 2368
MflI	RGATCY	4 cut(s)	1278, 1562, 1772, 2347
MhlI	GDGCHC	5 cut(s)	44, 258, 377, 1591, 2394
MlsI	TGGCCA	1 cut(s)	936
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	5 cut(s)	111, 239, 266, 2213, 2448
MmeI	TCCRAC	2 cut(s)	387, 2089
Mox20I	TGGCCA	1 cut(s)	936
Mph1103I	ATGCAT	1 cut(s)	1733
MroXI	GAANNNNTTC	1 cut(s)	1270
MscI	TGGCCA	1 cut(s)	936
MslI	CAYNNNNRTG	4 cut(s)	1247, 1452, 1845, 2028
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	2 cut(s)	2282, 2319
MspCI	CTTAAG	1 cut(s)	1052
MspI	CCGG	2 cut(s)	231, 1806
MspR9I	CCNGG	5 cut(s)	119, 217, 606, 1091, 2362
MunI	CAATTG	2 cut(s)	1372, 2368
Mva1269I	GAATGC	1 cut(s)	600
MvaI	CCWGG	5 cut(s)	119, 217, 606, 1091, 2362
MvnI	CGCG	2 cut(s)	1140, 2106
MwoI	GCNNNNNNNGC	6 cut(s)	467, 494, 1066, 1190, 2049, 2363
NdeI	CATATG	1 cut(s)	1957
NdeII	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
NlaIII	CATG	8 cut(s)	398, 772, 941, 1246, 1278, 1546, 1892, 2454
NlaIV	GGNNCC	4 cut(s)	31, 193, 1590, 1992
NmuCI	GTSAC	2 cut(s)	287, 1716
NsiI	ATGCAT	1 cut(s)	1733
NspI	RCATGY	1 cut(s)	772
OliI	CACNNNNGTG	2 cut(s)	1845, 2028
PaeR7I	CTCGAG	1 cut(s)	1905
PceI	AGGCCT	1 cut(s)	1759
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PctI	GAATGC	1 cut(s)	600
PdmI	GAANNNNTTC	1 cut(s)	1270
PfeI	GAWTC	2 cut(s)	1394, 2339
PflMI	CCANNNNNTGG	4 cut(s)	16, 163, 1508, 2168
PkrI	GCNGC	9 cut(s)	58, 499, 1059, 1071, 1924, 2035, 2188, 2281, 2318
PleI	GAGTC	5 cut(s)	110, 239, 266, 2213, 2447
PpsI	GAGTC	5 cut(s)	110, 239, 266, 2213, 2447
Ppu21I	YACGTR	1 cut(s)	1311
PpuMI	RGGWCCY	1 cut(s)	1991
PshBI	ATTAAT	2 cut(s)	1104, 1466
PsiI	TTATAA	1 cut(s)	1835
Psp124BI	GAGCTC	3 cut(s)	44, 258, 2394
Psp1406I	AACGTT	1 cut(s)	2494
Psp5II	RGGWCCY	1 cut(s)	1991
Psp6I	CCWGG	5 cut(s)	117, 215, 604, 1089, 2360
PspFI	CCCAGC	1 cut(s)	1583
PspGI	CCWGG	5 cut(s)	117, 215, 604, 1089, 2360
PspN4I	GGNNCC	4 cut(s)	31, 193, 1590, 1992
PspPI	GGNCC	8 cut(s)	191, 697, 1499, 1517, 1991, 2303, 2364, 2420
PspPPI	RGGWCCY	1 cut(s)	1991
PspXI	VCTCGAGB	1 cut(s)	1905
PsrI	GAACNNNNNNTAC	2 cut(s)	897, 929
PstI	CTGCAG	1 cut(s)	2134
PstNI	CAGNNNCTG	3 cut(s)	672, 1075, 1951
PsuI	RGATCY	4 cut(s)	1278, 1562, 1772, 2347
PvuII	CAGCTG	2 cut(s)	2282, 2319
RsaI	GTAC	6 cut(s)	348, 722, 915, 989, 1116, 1793
RsaNI	GTAC	6 cut(s)	347, 721, 914, 988, 1115, 1792
RseI	CAYNNNNRTG	4 cut(s)	1247, 1452, 1845, 2028
SacI	GAGCTC	3 cut(s)	44, 258, 2394
SatI	GCNGC	9 cut(s)	57, 498, 1058, 1070, 1923, 2034, 2187, 2280, 2317
Sau3AI	GATC	8 cut(s)	859, 1210, 1239, 1278, 1562, 1765, 1772, 2347
Sau96I	GGNCC	8 cut(s)	191, 697, 1499, 1517, 1991, 2303, 2364, 2420
ScaI	AGTACT	1 cut(s)	1793
SchI	GAGTC	5 cut(s)	111, 239, 266, 2213, 2448
ScrFI	CCNGG	5 cut(s)	119, 217, 606, 1091, 2362
SduI	GDGCHC	5 cut(s)	44, 258, 377, 1591, 2394
SexAI	ACCWGGT	1 cut(s)	1089
SfaNI	GCATC	4 cut(s)	631, 1348, 1358, 1792
SfcI	CTRYAG	3 cut(s)	706, 1227, 2130
Sfr274I	CTCGAG	1 cut(s)	1905
SinI	GGWCC	3 cut(s)	1517, 1991, 2303
SlaI	CTCGAG	1 cut(s)	1905
SmiMI	CAYNNNNRTG	4 cut(s)	1247, 1452, 1845, 2028
SmlI	CTYRAG	8 cut(s)	890, 1052, 1061, 1876, 1905, 2241, 2393, 2408
SmoI	CTYRAG	8 cut(s)	890, 1052, 1061, 1876, 1905, 2241, 2393, 2408
SseBI	AGGCCT	1 cut(s)	1759
SsiI	CCGC	8 cut(s)	154, 461, 1057, 1140, 1214, 1714, 2104, 2324
SspI	AATATT	1 cut(s)	1822
SspMI	CTAG	3 cut(s)	869, 1172, 1901
SstI	GAGCTC	3 cut(s)	44, 258, 2394
StuI	AGGCCT	1 cut(s)	1759
StyD4I	CCNGG	5 cut(s)	117, 215, 604, 1089, 2360
StyI	CCWWGG	1 cut(s)	1476
TaaI	ACNGT	9 cut(s)	293, 959, 987, 1036, 1077, 1741, 1844, 1967, 2027
TaiI	ACGT	6 cut(s)	54, 877, 1114, 1313, 1344, 2497
TaqI	TCGA	5 cut(s)	48, 174, 856, 1206, 1906
TatI	WGTACW	3 cut(s)	720, 987, 1791
TauI	GCSGC	1 cut(s)	1060
TfiI	GAWTC	2 cut(s)	1394, 2339
TscAI	CASTG	7 cut(s)	274, 677, 1080, 1755, 1874, 2030, 2380
TseFI	GTSAC	2 cut(s)	287, 1716
TseI	GCWGC	8 cut(s)	56, 497, 1069, 1922, 2033, 2186, 2279, 2316
Tsp45I	GTSAC	2 cut(s)	287, 1716
TspDTI	ATGAA	8 cut(s)	435, 569, 789, 1263, 1559, 1703, 2097, 2111
TspGWI	ACGGA	3 cut(s)	22, 996, 1428
TspRI	CASTG	7 cut(s)	274, 677, 1080, 1755, 1874, 2030, 2380
Van91I	CCANNNNNTGG	4 cut(s)	16, 163, 1508, 2168
Vha464I	CTTAAG	1 cut(s)	1052
VpaK11BI	GGWCC	3 cut(s)	1517, 1991, 2303
VspI	ATTAAT	2 cut(s)	1104, 1466
XapI	RAATTY	2 cut(s)	570, 966
XbaI	TCTAGA	2 cut(s)	868, 1171
XceI	RCATGY	1 cut(s)	772
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1454
XhoI	CTCGAG	1 cut(s)	1905
XmiI	GTMKAC	1 cut(s)	809
XmnI	GAANNNNTTC	1 cut(s)	1270
XspI	CTAG	3 cut(s)	869, 1172, 1901
ZrmI	AGTACT	1 cut(s)	1793
Zsp2I	ATGCAT	1 cut(s)	1733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.