Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Reverse (-)

82701015 .. 82706731

Gene Structure 5717 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G055250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGTCGCTGACATCCTCCGGGAGCTCGAGCCCAAACTCCATCGATGTTGCTGCAAACCCACATTCCGAGGACAATTCCTCGCCGAAGAAGAGGAGAGTCAGCTCTCGCCTCCAGGTCAAGCAGAAACCCCAAAAGGAACTTCTCGTCCGCCAGAGAGTGGAATTACTCGATGACAACGAACAAGGCCCCAGAAAGAAACAAGCAAATGTCAGGGGTAGGCAAACCGGAGAGGTTGCCGACTCGGAGGAGCTCCCAAAGGCCACTGACTCGGTTGAGAAGAGTGACCGTGTTAGGGTCAAAGAGACCCTCAGGTTGTTCAACAAGCATTATCTCTATTTCGTACAGGAAGAAGAGAAGAGGGCGGTGAAAGCAGAAGCCCAGAAGAAAGCTTCCAGAGCTGCAAAGAGAGGTGCAAAAAAATCTAAGGGTGATTTGAAGAAGGCAGATACAAAGGTGGCAAAACGACCTGATTTGAAGGCATTAACCAAGATGAATGACGAAAAAGAAATTTTGTTTCCTTCTAAAAGATTTGGAAGCATTCCAGGTATTGATGTCGGGCATCAGTTCTATTCTCGGGCTGAAATGGTTGCTGTTGGTTTCCACAGCCACTGGCTGAACGGGATTGATTATATGGGCCAGTCCTATAGTAAAGGGAAGTACAGCAACTATACAATGCCACTTGCAGTTGCTATTGTTATATCAGGCATGTATGAAGATGATTTGGACAATGCTGAGGAAGTTGTGTATACTGGTCAAGGTGGACATAATTTGACAGGTGATAAGCGTCAATTTCGAGATCAAGTTCTAGAACGTGGTAATTTGGCACTCAAGAATTGTGTGGAACAAGATGTACCTGTTAGAGTAGTCCGTGGCCATGATTGTAAAAGTAGTTACTGTGGCAAAATTTACACTTATGATGGACTGTACAAGGTTGTGAAGTATTGGGCAGAGAAGGGTATTTCTGGATTTACTGTTTTTAAGTATCGTCTTAAGCGGCTTGAGGGGCAGCCACTGTTAACCACCAACCAGGTTCAATTTATTAATGGACGTGTACCACAATCTATATCAGAAATACGCGGGTTGGTGTGCGAGGACATAACTGGGGGTCTAGAGGATATTGCCATTCCAGCTACCAATTTGGTCGATGATCCGCCTGTTGCTCCTACAGGTTACACGTATTGCAAGTCTATTCAAGTTGCAAAAAACGTGAAGCTTCCCACAGATGCCACTGGATGCAATTGCAAAGGAAGTTGTGTAGATTCCAAGACCTGCGAATGTGCCAAACTTAACGGCTCTGACTTTCCGTATGTCCACCGTGATGGTGGCAGATTAATTGAAGCCAAGGATGTAGTGTTTGAATGTGGGCCAAAATGTGGTTGTGGACCTTCTTGTGTCAACCGTACTTCTCAGAGGGGGCTCAAGTACCGATTTGAGGTTTTCCGAACGCCCATGAAAGGGTGGGCAGTTAGATCTTGGGATTTTATACCTGCTGGGGCACCAGTTTGTGAGTATGTAGGAATACTTCGCAGGACAGAAGATGTGGATAGTGCCTCGGAGAATTATTACATTTTTGACATTGATTGCTTGCAAACAATGAAGGGGCTTGATGGGAGGGAGAGGCGATCACAAGCTGTATGCATACCAACAGTTAATTCACTCGAGAGGCCTGATGATCAGAGATCTGATAATGTGCCAGAGTACTGCATTGATGCTGGTTCTAATGGAAATATTGCCAGATTTATAAACCACAGTTGTGAGCCTAATCTGTTTGTTCAGTGTGTCTTGAGTTCACACCATGACATCAAACTAGCTCGAGTAATGCTGTTTGCAGCAGACAACATACCTCCTTTGCAGGAGCTGACATATGACTACGGTTACGCCCTTGATAGTGTCTTGGGCCCTGATGGGAAGGTAAAGAAGATGTTTTGCCACTGTGGTGCAGCAGGTTGCAGGAAACGCTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

655

Amino Acids

73.07

Weight (kDa)

8.82

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	176 - 336	5.8e-52	SAD/SRA domain
Pre-SET	PF05033	369 - 467	2e-17	Pre-SET motif
SET	PF00856	486 - 625	5.7e-20	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1742
Acc36I	ACCTGC	3 cut(s)	1277, 1495, 1934
AccB1I	GGYRCC	1 cut(s)	1495
AccB7I	CCANNNNNTGG	2 cut(s)	157, 1373
AccI	GTMKAC	1 cut(s)	746
AccII	CGCG	1 cut(s)	1077
AciI	CCGC	5 cut(s)	148, 362, 994, 1077, 1151
AclWI	GGATC	1 cut(s)	1142
AcoI	YGGCCR	1 cut(s)	871
AcsI	RAATTY	2 cut(s)	507, 903
AfaI	GTAC	8 cut(s)	342, 659, 852, 926, 1053, 1402, 1424, 1700
AfiI	CCNNNNNNNGG	6 cut(s)	157, 292, 1373, 1432, 1454, 1455
AflII	CTTAAG	1 cut(s)	989
AflIII	ACRYGT	2 cut(s)	1048, 1173
AgsI	TTSAA	7 cut(s)	319, 436, 475, 1034, 1193, 1337, 1358
AjiI	CACGTC	1 cut(s)	1049
AjnI	CCWGG	3 cut(s)	111, 541, 1026
AjuI	GAANNNNNNNTTGG	4 cut(s)	123, 155, 1636, 1668
AleI	CACNNNNGTG	2 cut(s)	1752, 1935
AloI	GAACNNNNNNTCC	2 cut(s)	129, 161
Alw21I	GWGCWC	2 cut(s)	26, 252
Alw26I	GTCTC	1 cut(s)	296
AlwI	GGATC	1 cut(s)	1142
AlwNI	CAGNNNCTG	3 cut(s)	609, 1012, 1858
Ama87I	CYCGRG	4 cut(s)	25, 573, 1658, 1812
AoxI	GGCC	7 cut(s)	184, 258, 634, 871, 1364, 1664, 1897
ApaI	GGGCCC	1 cut(s)	1901
ApeKI	GCWGC	5 cut(s)	50, 398, 1006, 1829, 1940
ApoI	RAATTY	2 cut(s)	507, 903
AseI	ATTAAT	2 cut(s)	1041, 1331
AspS9I	GGNCC	6 cut(s)	185, 634, 1364, 1382, 1897, 1898
AsuC2I	CCSGG	1 cut(s)	19
AsuHPI	GGTGA	3 cut(s)	376, 440, 788
AvaI	CYCGRG	4 cut(s)	25, 573, 1658, 1812
AvaII	GGWCC	1 cut(s)	1382
AxyI	CCTNAGG	1 cut(s)	308
BaeGI	GKGCMC	2 cut(s)	1498, 1901
BaeI	ACNNNNGTAYC	2 cut(s)	438, 471
BalI	TGGCCA	1 cut(s)	873
BanI	GGYRCC	1 cut(s)	1495
BanII	GRGCYC	5 cut(s)	26, 32, 252, 1419, 1901
BarI	GAAGNNNNNNTAC	2 cut(s)	1506, 1538
Bbv12I	GWGCWC	2 cut(s)	26, 252
BbvCI	CCTCAGC	1 cut(s)	732
BbvI	GCAGC	5 cut(s)	37, 385, 1018, 1841, 1952
BccI	CCATC	5 cut(s)	47, 911, 1313, 1601, 1898
BceAI	ACGGC	1 cut(s)	1306
BcgI	CGANNNNNNTGC	2 cut(s)	32, 66
BciT130I	CCWGG	3 cut(s)	113, 543, 1028
BclI	TGATCA	1 cut(s)	1672
BcnI	CCSGG	1 cut(s)	19
BcoDI	GTCTC	1 cut(s)	296
BfaI	CTAG	4 cut(s)	806, 1109, 1808, 1966
BfmI	CTRYAG	2 cut(s)	643, 1164
BfrI	CTTAAG	1 cut(s)	989
BfuAI	ACCTGC	3 cut(s)	1277, 1495, 1934
BglII	AGATCT	2 cut(s)	1469, 1679
BisI	GCNGC	6 cut(s)	51, 399, 995, 1007, 1830, 1941
BlsI	GCNGC	6 cut(s)	52, 400, 996, 1008, 1831, 1942
BmcAI	AGTACT	1 cut(s)	1700
Bme1390I	CCNGG	4 cut(s)	19, 113, 543, 1028
Bme18I	GGWCC	1 cut(s)	1382
BmeT110I	CYCGRG	4 cut(s)	25, 573, 1658, 1812
BmgBI	CACGTC	1 cut(s)	1049
BmgT120I	GGNCC	6 cut(s)	185, 634, 1364, 1382, 1897, 1898
BmiI	GGNNCC	3 cut(s)	187, 1497, 1899
BmrFI	CCNGG	4 cut(s)	19, 113, 543, 1028
BmrI	ACTGGG	1 cut(s)	1110
BmsI	GCATC	4 cut(s)	568, 1213, 1223, 1699
BmuI	ACTGGG	1 cut(s)	1110
BpmI	CTGGAG	1 cut(s)	95
Bpu10I	CCTNAGC	1 cut(s)	732
BpuEI	CTTGAG	4 cut(s)	812, 1019, 1403, 1804
BpuMI	CCSGG	1 cut(s)	19
Bsa29I	ATCGAT	1 cut(s)	42
BsaAI	YACGTR	1 cut(s)	1176
BsaI	GGTCTC	1 cut(s)	296
BsaJI	CCNNGG	4 cut(s)	66, 868, 1341, 1551
BsaWI	WCCGGW	1 cut(s)	224
Bsc4I	CCNNNNNNNGG	6 cut(s)	157, 292, 1373, 1432, 1454, 1455
Bse1I	ACTGG	6 cut(s)	614, 637, 754, 1105, 1234, 1499
Bse21I	CCTNAGG	1 cut(s)	308
BseBI	CCWGG	3 cut(s)	113, 543, 1028
BseCI	ATCGAT	1 cut(s)	42
BseDI	CCNNGG	4 cut(s)	66, 868, 1341, 1551
BseGI	GGATG	3 cut(s)	11, 1238, 1351
BseLI	CCNNNNNNNGG	6 cut(s)	157, 292, 1373, 1432, 1454, 1455
BseMII	CTCAG	3 cut(s)	322, 723, 1421
BseNI	ACTGG	6 cut(s)	614, 637, 754, 1105, 1234, 1499
BseRI	GAGGAG	2 cut(s)	106, 260
BseSI	GKGCMC	2 cut(s)	1498, 1901
BseXI	GCAGC	5 cut(s)	37, 385, 1018, 1841, 1952
BseYI	CCCAGC	1 cut(s)	1490
BsgI	GTGCAG	1 cut(s)	1959
Bsh1236I	CGCG	1 cut(s)	1077
BshFI	GGCC	7 cut(s)	186, 260, 636, 873, 1366, 1666, 1899
BshNI	GGYRCC	1 cut(s)	1495
BshVI	ATCGAT	1 cut(s)	42
BsiHKAI	GWGCWC	2 cut(s)	26, 252
BsiHKCI	CYCGRG	4 cut(s)	25, 573, 1658, 1812
BsiSI	CCGG	2 cut(s)	18, 225
BslI	CCNNNNNNNGG	6 cut(s)	157, 292, 1373, 1432, 1454, 1455
BsmAI	GTCTC	1 cut(s)	296
BsmI	GAATGC	1 cut(s)	537
BsnI	GGCC	7 cut(s)	186, 260, 636, 873, 1366, 1666, 1899
Bso31I	GGTCTC	1 cut(s)	296
BsoBI	CYCGRG	4 cut(s)	25, 573, 1658, 1812
Bsp120I	GGGCCC	1 cut(s)	1897
Bsp1286I	GDGCHC	6 cut(s)	26, 32, 252, 1419, 1498, 1901
Bsp1407I	TGTACA	1 cut(s)	924
Bsp143I	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
BspACI	CCGC	5 cut(s)	148, 362, 994, 1077, 1151
BspANI	GGCC	7 cut(s)	186, 260, 636, 873, 1366, 1666, 1899
BspCNI	CTCAG	3 cut(s)	321, 724, 1420
BspDI	ATCGAT	1 cut(s)	42
BspFNI	CGCG	1 cut(s)	1077
BspLI	GGNNCC	3 cut(s)	187, 1497, 1899
BspMI	ACCTGC	3 cut(s)	1277, 1495, 1934
BspPI	GGATC	1 cut(s)	1142
BspT107I	GGYRCC	1 cut(s)	1495
BspTI	CTTAAG	1 cut(s)	989
BspTNI	GGTCTC	1 cut(s)	296
BsrGI	TGTACA	1 cut(s)	924
BsrI	ACTGG	6 cut(s)	614, 637, 754, 1105, 1234, 1499
BssECI	CCNNGG	4 cut(s)	66, 868, 1341, 1551
BssMI	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
BssNAI	GTATAC	1 cut(s)	747
BssT1I	CCWWGG	1 cut(s)	1341
Bst1107I	GTATAC	1 cut(s)	747
Bst2UI	CCWGG	3 cut(s)	113, 543, 1028
Bst6I	CTCTTC	4 cut(s)	83, 272, 345, 350
BstAFI	CTTAAG	1 cut(s)	989
BstAUI	TGTACA	1 cut(s)	924
BstBAI	YACGTR	1 cut(s)	1176
BstC8I	GCNNGC	1 cut(s)	1586
BstDEI	CTNAG	4 cut(s)	308, 423, 732, 1407
BstDSI	CCRYGG	1 cut(s)	868
BstF5I	GGATG	3 cut(s)	11, 1238, 1351
BstFNI	CGCG	1 cut(s)	1077
BstKTI	GATC	6 cut(s)	799, 1150, 1472, 1625, 1675, 1682
BstMAI	GTCTC	1 cut(s)	296
BstMBI	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
BstMWI	GCNNNNNNNGC	5 cut(s)	368, 395, 1003, 1127, 1956
BstNI	CCWGG	3 cut(s)	113, 543, 1028
BstNSI	RCATGY	1 cut(s)	709
BstSCI	CCNGG	4 cut(s)	17, 111, 541, 1026
BstSFI	CTRYAG	2 cut(s)	643, 1164
BstSLI	GKGCMC	2 cut(s)	1498, 1901
BstUI	CGCG	1 cut(s)	1077
BstV1I	GCAGC	5 cut(s)	37, 385, 1018, 1841, 1952
BstX2I	RGATCY	2 cut(s)	1469, 1679
BstXI	CCANNNNNNTGG	1 cut(s)	1319
BstYI	RGATCY	2 cut(s)	1469, 1679
BstZ17I	GTATAC	1 cut(s)	747
Bsu15I	ATCGAT	1 cut(s)	42
Bsu36I	CCTNAGG	1 cut(s)	308
BsuRI	GGCC	7 cut(s)	186, 260, 636, 873, 1366, 1666, 1899
BsuTUI	ATCGAT	1 cut(s)	42
BtgI	CCRYGG	1 cut(s)	868
BtrI	CACGTC	1 cut(s)	1049
BtsCI	GGATG	3 cut(s)	11, 1238, 1351
BtsIMutI	CAGTG	6 cut(s)	261, 607, 1010, 1227, 1781, 1930
BveI	ACCTGC	3 cut(s)	1277, 1495, 1934
Cac8I	GCNNGC	1 cut(s)	1586
CaiI	CAGNNNCTG	3 cut(s)	609, 1012, 1858
Cfr13I	GGNCC	6 cut(s)	185, 634, 1364, 1382, 1897, 1898
ClaI	ATCGAT	1 cut(s)	42
CseI	GACGC	1 cut(s)	773
CsiI	ACCWGGT	1 cut(s)	1026
Csp6I	GTAC	8 cut(s)	341, 658, 851, 925, 1052, 1401, 1423, 1699
CviAII	CATG	4 cut(s)	706, 875, 1450, 1796
CviQI	GTAC	8 cut(s)	341, 658, 851, 925, 1052, 1401, 1423, 1699
DdeI	CTNAG	4 cut(s)	308, 423, 732, 1407
DpnI	GATC	6 cut(s)	798, 1149, 1471, 1624, 1674, 1681
DpnII	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
EaeI	YGGCCR	1 cut(s)	871
Eam1104I	CTCTTC	4 cut(s)	83, 272, 345, 350
EarI	CTCTTC	4 cut(s)	83, 272, 345, 350
EciI	GGCGGA	2 cut(s)	137, 1140
Ecl136II	GAGCTC	2 cut(s)	24, 250
Eco130I	CCWWGG	1 cut(s)	1341
Eco147I	AGGCCT	1 cut(s)	1666
Eco24I	GRGCYC	5 cut(s)	26, 32, 252, 1419, 1901
Eco31I	GGTCTC	1 cut(s)	296
Eco47I	GGWCC	1 cut(s)	1382
Eco53kI	GAGCTC	2 cut(s)	24, 250
Eco81I	CCTNAGG	1 cut(s)	308
Eco88I	CYCGRG	4 cut(s)	25, 573, 1658, 1812
EcoICRI	GAGCTC	2 cut(s)	24, 250
EcoO109I	RGGNCCY	2 cut(s)	185, 1898
EcoRII	CCWGG	3 cut(s)	111, 541, 1026
EcoT14I	CCWWGG	1 cut(s)	1341
EcoT22I	ATGCAT	1 cut(s)	1640
EcoT38I	GRGCYC	5 cut(s)	26, 32, 252, 1419, 1901
ErhI	CCWWGG	1 cut(s)	1341
FaeI	CATG	4 cut(s)	709, 878, 1453, 1799
FatI	CATG	4 cut(s)	705, 874, 1449, 1795
FauI	CCCGC	1 cut(s)	1070
FauNDI	CATATG	1 cut(s)	1864
FbaI	TGATCA	1 cut(s)	1672
FblI	GTMKAC	1 cut(s)	746
Fnu4HI	GCNGC	6 cut(s)	51, 399, 995, 1007, 1830, 1941
FokI	GGATG	2 cut(s)	1245, 1358
FriOI	GRGCYC	5 cut(s)	26, 32, 252, 1419, 1901
Fsp4HI	GCNGC	6 cut(s)	51, 399, 995, 1007, 1830, 1941
FspBI	CTAG	4 cut(s)	806, 1109, 1808, 1966
GluI	GCNGC	6 cut(s)	51, 399, 995, 1007, 1830, 1941
GsaI	CCCAGC	1 cut(s)	1494
GsuI	CTGGAG	1 cut(s)	95
HaeIII	GGCC	7 cut(s)	186, 260, 636, 873, 1366, 1666, 1899
HapII	CCGG	2 cut(s)	18, 225
HgaI	GACGC	1 cut(s)	773
Hin1II	CATG	4 cut(s)	709, 878, 1453, 1799
HincII	GTYRAC	2 cut(s)	1017, 1396
HindII	GTYRAC	2 cut(s)	1017, 1396
HindIII	AAGCTT	2 cut(s)	387, 1211
HinfI	GANTC	4 cut(s)	96, 239, 266, 1259
HpaI	GTTAAC	1 cut(s)	1017
HpaII	CCGG	2 cut(s)	18, 225
HphI	GGTGA	3 cut(s)	376, 440, 788
Hpy166II	GTNNAC	8 cut(s)	747, 761, 1017, 1052, 1312, 1382, 1396, 1790
Hpy188I	TCNGA	9 cut(s)	67, 244, 1069, 1297, 1410, 1442, 1555, 1677, 1684
Hpy188III	TCNNGA	8 cut(s)	393, 794, 806, 829, 963, 1109, 1660, 1783
Hpy8I	GTNNAC	8 cut(s)	747, 761, 1017, 1052, 1312, 1382, 1396, 1790
HpyAV	CCTTC	7 cut(s)	433, 469, 528, 946, 1395, 1591, 1903
HpyCH4IV	ACGT	4 cut(s)	811, 1048, 1175, 1206
HpyF10VI	GCNNNNNNNGC	5 cut(s)	368, 395, 1003, 1127, 1956
HpyF3I	CTNAG	4 cut(s)	308, 423, 732, 1407
HpySE526I	ACGT	4 cut(s)	811, 1048, 1175, 1206
Hsp92II	CATG	4 cut(s)	709, 878, 1453, 1799
Ksp22I	TGATCA	1 cut(s)	1672
KspAI	GTTAAC	1 cut(s)	1017
Kzo9I	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
LmnI	GCTCC	5 cut(s)	21, 247, 255, 1165, 1855
Lsp1109I	GCAGC	5 cut(s)	37, 385, 1018, 1841, 1952
LweI	GCATC	4 cut(s)	568, 1213, 1223, 1699
MabI	ACCWGGT	1 cut(s)	1026
MaeI	CTAG	4 cut(s)	806, 1109, 1808, 1966
MaeII	ACGT	4 cut(s)	811, 1048, 1175, 1206
MaeIII	GTNAC	4 cut(s)	281, 890, 1169, 1874
MalI	GATC	6 cut(s)	798, 1149, 1471, 1624, 1674, 1681
MboI	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
MfeI	CAATTG	1 cut(s)	1237
MflI	RGATCY	2 cut(s)	1469, 1679
MhlI	GDGCHC	6 cut(s)	26, 32, 252, 1419, 1498, 1901
MlsI	TGGCCA	1 cut(s)	873
MluNI	TGGCCA	1 cut(s)	873
MlyI	GAGTC	3 cut(s)	105, 233, 260
Mox20I	TGGCCA	1 cut(s)	873
Mph1103I	ATGCAT	1 cut(s)	1640
MscI	TGGCCA	1 cut(s)	873
MseI	TTAA	8 cut(s)	482, 978, 990, 1016, 1041, 1287, 1331, 1650
MslI	CAYNNNNRTG	3 cut(s)	1317, 1752, 1935
Msp20I	TGGCCA	1 cut(s)	873
MspCI	CTTAAG	1 cut(s)	989
MspI	CCGG	2 cut(s)	18, 225
MspR9I	CCNGG	4 cut(s)	19, 113, 543, 1028
MunI	CAATTG	1 cut(s)	1237
Mva1269I	GAATGC	1 cut(s)	537
MvaI	CCWGG	3 cut(s)	113, 543, 1028
MvnI	CGCG	1 cut(s)	1077
MwoI	GCNNNNNNNGC	5 cut(s)	368, 395, 1003, 1127, 1956
NciI	CCSGG	1 cut(s)	19
NdeI	CATATG	1 cut(s)	1864
NdeII	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
NlaIII	CATG	4 cut(s)	709, 878, 1453, 1799
NlaIV	GGNNCC	3 cut(s)	187, 1497, 1899
NmuCI	GTSAC	1 cut(s)	281
NsiI	ATGCAT	1 cut(s)	1640
NspI	RCATGY	1 cut(s)	709
OliI	CACNNNNGTG	2 cut(s)	1752, 1935
PaeR7I	CTCGAG	3 cut(s)	25, 1658, 1812
PceI	AGGCCT	1 cut(s)	1666
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PctI	GAATGC	1 cut(s)	537
PfeI	GAWTC	1 cut(s)	1259
PflMI	CCANNNNNTGG	2 cut(s)	157, 1373
PfoI	TCCNGGA	1 cut(s)	17
PkrI	GCNGC	6 cut(s)	52, 400, 996, 1008, 1831, 1942
PleI	GAGTC	3 cut(s)	104, 233, 260
PpsI	GAGTC	3 cut(s)	104, 233, 260
Ppu21I	YACGTR	1 cut(s)	1176
PshBI	ATTAAT	2 cut(s)	1041, 1331
PsiI	TTATAA	1 cut(s)	1742
Psp124BI	GAGCTC	2 cut(s)	26, 252
Psp6I	CCWGG	3 cut(s)	111, 541, 1026
PspFI	CCCAGC	1 cut(s)	1490
PspGI	CCWGG	3 cut(s)	111, 541, 1026
PspN4I	GGNNCC	3 cut(s)	187, 1497, 1899
PspOMI	GGGCCC	1 cut(s)	1897
PspPI	GGNCC	6 cut(s)	185, 634, 1364, 1382, 1897, 1898
PspXI	VCTCGAGB	2 cut(s)	25, 1812
PsrI	GAACNNNNNNTAC	2 cut(s)	834, 866
PstNI	CAGNNNCTG	3 cut(s)	609, 1012, 1858
PsuI	RGATCY	2 cut(s)	1469, 1679
RsaI	GTAC	8 cut(s)	342, 659, 852, 926, 1053, 1402, 1424, 1700
RsaNI	GTAC	8 cut(s)	341, 658, 851, 925, 1052, 1401, 1423, 1699
RseI	CAYNNNNRTG	3 cut(s)	1317, 1752, 1935
SacI	GAGCTC	2 cut(s)	26, 252
SaqAI	TTAA	8 cut(s)	482, 978, 990, 1016, 1041, 1287, 1331, 1650
SatI	GCNGC	6 cut(s)	51, 399, 995, 1007, 1830, 1941
Sau3AI	GATC	6 cut(s)	796, 1147, 1469, 1622, 1672, 1679
Sau96I	GGNCC	6 cut(s)	185, 634, 1364, 1382, 1897, 1898
ScaI	AGTACT	1 cut(s)	1700
SchI	GAGTC	3 cut(s)	105, 233, 260
ScrFI	CCNGG	4 cut(s)	19, 113, 543, 1028
SduI	GDGCHC	6 cut(s)	26, 32, 252, 1419, 1498, 1901
SexAI	ACCWGGT	1 cut(s)	1026
SfaNI	GCATC	4 cut(s)	568, 1213, 1223, 1699
SfcI	CTRYAG	2 cut(s)	643, 1164
Sfr274I	CTCGAG	3 cut(s)	25, 1658, 1812
SinI	GGWCC	1 cut(s)	1382
SlaI	CTCGAG	3 cut(s)	25, 1658, 1812
SmiMI	CAYNNNNRTG	3 cut(s)	1317, 1752, 1935
SmlI	CTYRAG	8 cut(s)	25, 827, 989, 998, 1418, 1658, 1783, 1812
SmoI	CTYRAG	8 cut(s)	25, 827, 989, 998, 1418, 1658, 1783, 1812
SseBI	AGGCCT	1 cut(s)	1666
SsiI	CCGC	5 cut(s)	148, 362, 994, 1077, 1151
SspI	AATATT	1 cut(s)	1729
SspMI	CTAG	4 cut(s)	806, 1109, 1808, 1966
SstI	GAGCTC	2 cut(s)	26, 252
StuI	AGGCCT	1 cut(s)	1666
StyD4I	CCNGG	4 cut(s)	17, 111, 541, 1026
StyI	CCWWGG	1 cut(s)	1341
TaiI	ACGT	4 cut(s)	814, 1051, 1178, 1209
TaqI	TCGA	7 cut(s)	26, 42, 168, 793, 1143, 1659, 1813
TatI	WGTACW	3 cut(s)	657, 924, 1698
TauI	GCSGC	1 cut(s)	997
TfiI	GAWTC	1 cut(s)	1259
Tru1I	TTAA	8 cut(s)	482, 978, 990, 1016, 1041, 1287, 1331, 1650
Tru9I	TTAA	8 cut(s)	482, 978, 990, 1016, 1041, 1287, 1331, 1650
TscAI	CASTG	6 cut(s)	268, 614, 1017, 1234, 1781, 1937
TseFI	GTSAC	1 cut(s)	281
TseI	GCWGC	5 cut(s)	50, 398, 1006, 1829, 1940
Tsp45I	GTSAC	1 cut(s)	281
TspDTI	ATGAA	4 cut(s)	506, 726, 1466, 1610
TspGWI	ACGGA	2 cut(s)	857, 1293
TspRI	CASTG	6 cut(s)	268, 614, 1017, 1234, 1781, 1937
Van91I	CCANNNNNTGG	2 cut(s)	157, 1373
Vha464I	CTTAAG	1 cut(s)	989
VpaK11BI	GGWCC	1 cut(s)	1382
VspI	ATTAAT	2 cut(s)	1041, 1331
XapI	RAATTY	2 cut(s)	507, 903
XbaI	TCTAGA	2 cut(s)	805, 1108
XceI	RCATGY	1 cut(s)	709
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1319
XhoI	CTCGAG	3 cut(s)	25, 1658, 1812
XmiI	GTMKAC	1 cut(s)	746
XspI	CTAG	4 cut(s)	806, 1109, 1808, 1966
ZrmI	AGTACT	1 cut(s)	1700
Zsp2I	ATGCAT	1 cut(s)	1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.