Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Reverse (-)

81677600 .. 81683309

Gene Structure 5710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG647600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGTAGTCCAATCGCTGGAGGGCGTGGGTTCCGTTCAGAGCTCCATCGATGTTGCTGCAAACCCACATTCCGAGGACAATTCCTCGCCGAAGAAGAGGAGAGTCAGCTCTCGCCTCCAGGTCAAGCAGAAACCCCAAAAGGAACTTCTCGTCCGCCAGAGAGTGGAATTACTCGATGACAACGAACAAGGCCCCAGAAAGAAACAAGCAAATGTCAGGGGTAGGCAAACCGGAGAGGTTGCCGACTCGGAGGAGCTCCCAAAGGCCACTGACTCGGTTGAGAAGAGTGACCGTGTTAGGGTCAAAGAGACCCTCAGGTTGTTCAACAAGCATTATCTCTATTTCGTACAGGAAGAAGAGAAGAGGGCGGTGAAAGCAGAAGCCCAGAAGAAAGCTTCCAGAGCCGCAAAGAGAGGTGCAAAAAAATCTAAGAAGGGTGATTTGAAGAAGGCAGATACAAAGGTGGCAAAACGACCTGATTTGAAGGCATTAACCAAGATGAATGACGAAAAAGAAATTTTGTTTCCTTCTAAAAGATTTGGAAGCATTCCAGGTATTGATGTCGGGCATCAGTTCTATTCTCGGGCTGAAATGGTTGCTGTTGGTTTCCACAGCCACTGGCTGAACGGGATTGATTATATGGGCCAGTCCTATAGTAAAGGGAAGTACAGCAACTATACAATGCCACTTGCAGTTGCTATTGTTATATCAGGCATGTATGAAGATGATTTGGACAATGCTGAGGAAGTTGTGTATACTGGTCAAGGTGGACATAATTTGACAGGTGATAAGCGTCAATTTCGAGATCAAGTTCTAGAACGTGGTAATTTGGCACTCAAGAATTGTGTGGAACAAGATGTACCTGTTAGAGTAGTTCGTGGCCATGATTGTAAAAGTAGTTACTGTGGCAAAATTTACACTTATGATGGACTGTACAAGGTTGTGAAGTATTGGGCAGAGAAGGGTATTTCTGGATTTACTGTTTTTAAGTATCGTCTTAAGCGGCTTGAGGGGCAGCCACTGTTAACCACCAACCAGGTTCAATTTATTAATGGACGTGTACCACAATCTATATCAGAAATACGCGGGTTGGTGTGCGAGGACATAACTGGGGGTCTAGAGGATATTGCCATTCCAGCTACCAATTTGGTTGACGATCCGCCTGTTGCTCCTACAGGTTACACGTATTGCAAGTCTATTCAAGTTGCGAAAAACGTGAAGCTTCCCACAGATGCCACTGGATGCAATTGCAAAGGAAGTTGTGTAGATTCCAAGACCTGCGAATGTGCCAAACTTAACGGCTCTGACTTTCCGTATGTTCACCGTGATGGTGGCAGATTAATTGAAGCCAAGGATGTAGTGTTTGAATGTGGACCAAAATGTGGTTGTGGACCTTCTTGTGTCAACCGTACTTCTCAGAGGGGGCTCAAGTACCGATTTGAGGTTTTCCGAACGCCCATGAAAGGGTGGGCAGTTAGATCTTGGGATTTTATACCTGCTGGGGCACCAGTTTGTGAGTATGTAGGAATACTTCGCAGGACAGAAGATGTGGATAGTGCCTCGGAGAATTTTTACATTTTTGACATTGATTGCTTGCAAACAATGAAGGGGCTTGATGGGAGGGAGAGGCGATCACAAGCTGTATGCATACCAACAGTTAATTCACTGGAGAGGCCTGATGATCAGAGATCTGATAATGTGCCAGAGTACTGCATTGATGCTGGTTCTAATGGAAATATTGCCAGATTTATAAACCACAGTTGTGAGCCTAATCTCTTTGTTCAGTGTGTCTTGAGTTCACACCATGACATCAAACTAGCTCGAGTAATGCTGTTTGCAGCAGACAACATACCTCCTTTGCAGGAGCTGACATATGACTACGGTTACGCCCTTGATAGTGTCTTGGGCCCTGATGGGAAGGTAAAGAAGATGTTTTGCCACTGTGGTGCAGCAGGTTGCAGGAAACGCTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

658

Amino Acids

73.45

Weight (kDa)

8.82

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	179 - 339	5.9e-52	SAD/SRA domain
Pre-SET	PF05033	372 - 470	2e-17	Pre-SET motif
SET	PF00856	489 - 628	9.7e-20	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1751
Acc36I	ACCTGC	3 cut(s)	1286, 1504, 1943
AccB1I	GGYRCC	1 cut(s)	1504
AccB7I	CCANNNNNTGG	3 cut(s)	16, 163, 1382
AccI	GTMKAC	1 cut(s)	755
AccII	CGCG	1 cut(s)	1086
AciI	CCGC	6 cut(s)	154, 368, 405, 1003, 1086, 1160
AclWI	GGATC	1 cut(s)	1151
AcoI	YGGCCR	1 cut(s)	880
AcsI	RAATTY	3 cut(s)	516, 912, 1567
AfaI	GTAC	8 cut(s)	348, 668, 861, 935, 1062, 1411, 1433, 1709
AfiI	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1382, 1441, 1463, 1464
AflII	CTTAAG	1 cut(s)	998
AflIII	ACRYGT	2 cut(s)	1057, 1182
AgsI	TTSAA	7 cut(s)	325, 445, 484, 1043, 1202, 1346, 1367
AjiI	CACGTC	1 cut(s)	1058
AjnI	CCWGG	3 cut(s)	117, 550, 1035
AjuI	GAANNNNNNNTTGG	4 cut(s)	129, 161, 1645, 1677
AleI	CACNNNNGTG	2 cut(s)	1761, 1944
AloI	GAACNNNNNNTCC	2 cut(s)	135, 167
AluBI	AGCT	9 cut(s)	42, 108, 256, 395, 1139, 1222, 1640, 1820, 1867
AluI	AGCT	9 cut(s)	42, 108, 256, 395, 1139, 1222, 1640, 1820, 1867
Alw21I	GWGCWC	2 cut(s)	44, 258
Alw26I	GTCTC	1 cut(s)	302
AlwI	GGATC	1 cut(s)	1151
AlwNI	CAGNNNCTG	3 cut(s)	618, 1021, 1867
Ama87I	CYCGRG	2 cut(s)	582, 1821
AoxI	GGCC	6 cut(s)	190, 264, 643, 880, 1673, 1906
ApaI	GGGCCC	1 cut(s)	1910
ApeKI	GCWGC	4 cut(s)	56, 1015, 1838, 1949
ApoI	RAATTY	3 cut(s)	516, 912, 1567
AseI	ATTAAT	2 cut(s)	1050, 1340
AspS9I	GGNCC	6 cut(s)	191, 643, 1373, 1391, 1906, 1907
AsuHPI	GGTGA	4 cut(s)	382, 449, 797, 1313
AvaI	CYCGRG	2 cut(s)	582, 1821
AvaII	GGWCC	2 cut(s)	1373, 1391
AxyI	CCTNAGG	1 cut(s)	314
BaeGI	GKGCMC	2 cut(s)	1507, 1910
BaeI	ACNNNNGTAYC	2 cut(s)	447, 480
BalI	TGGCCA	1 cut(s)	882
BanI	GGYRCC	1 cut(s)	1504
BanII	GRGCYC	4 cut(s)	44, 258, 1428, 1910
BarI	GAAGNNNNNNTAC	2 cut(s)	1515, 1547
Bbv12I	GWGCWC	2 cut(s)	44, 258
BbvCI	CCTCAGC	1 cut(s)	741
BbvI	GCAGC	4 cut(s)	43, 1027, 1850, 1961
BccI	CCATC	5 cut(s)	53, 920, 1322, 1610, 1907
BceAI	ACGGC	1 cut(s)	1315
BcgI	CGANNNNNNTGC	2 cut(s)	38, 72
BciT130I	CCWGG	3 cut(s)	119, 552, 1037
BclI	TGATCA	1 cut(s)	1681
BcoDI	GTCTC	1 cut(s)	302
BfaI	CTAG	4 cut(s)	815, 1118, 1817, 1975
BfmI	CTRYAG	2 cut(s)	652, 1173
BfrI	CTTAAG	1 cut(s)	998
BfuAI	ACCTGC	3 cut(s)	1286, 1504, 1943
BglII	AGATCT	2 cut(s)	1478, 1688
BisI	GCNGC	6 cut(s)	57, 405, 1004, 1016, 1839, 1950
BlsI	GCNGC	6 cut(s)	58, 406, 1005, 1017, 1840, 1951
BmcAI	AGTACT	1 cut(s)	1709
Bme1390I	CCNGG	3 cut(s)	119, 552, 1037
Bme18I	GGWCC	2 cut(s)	1373, 1391
BmeT110I	CYCGRG	2 cut(s)	582, 1821
BmgBI	CACGTC	1 cut(s)	1058
BmgT120I	GGNCC	6 cut(s)	191, 643, 1373, 1391, 1906, 1907
BmiI	GGNNCC	4 cut(s)	31, 193, 1506, 1908
BmrFI	CCNGG	3 cut(s)	119, 552, 1037
BmrI	ACTGGG	1 cut(s)	1119
BmsI	GCATC	4 cut(s)	577, 1222, 1232, 1708
BmuI	ACTGGG	1 cut(s)	1119
BpmI	CTGGAG	3 cut(s)	38, 101, 1688
Bpu10I	CCTNAGC	1 cut(s)	741
BpuEI	CTTGAG	4 cut(s)	821, 1028, 1412, 1813
Bsa29I	ATCGAT	1 cut(s)	48
BsaAI	YACGTR	1 cut(s)	1185
BsaI	GGTCTC	1 cut(s)	302
BsaJI	CCNNGG	3 cut(s)	72, 1350, 1560
BsaWI	WCCGGW	1 cut(s)	230
Bsc4I	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1382, 1441, 1463, 1464
Bse1I	ACTGG	7 cut(s)	623, 646, 763, 1114, 1243, 1508, 1671
Bse21I	CCTNAGG	1 cut(s)	314
BseBI	CCWGG	3 cut(s)	119, 552, 1037
BseCI	ATCGAT	1 cut(s)	48
BseDI	CCNNGG	3 cut(s)	72, 1350, 1560
BseGI	GGATG	2 cut(s)	1247, 1360
BseLI	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1382, 1441, 1463, 1464
BseMII	CTCAG	3 cut(s)	328, 732, 1430
BseNI	ACTGG	7 cut(s)	623, 646, 763, 1114, 1243, 1508, 1671
BseRI	GAGGAG	2 cut(s)	112, 266
BseSI	GKGCMC	2 cut(s)	1507, 1910
BseXI	GCAGC	4 cut(s)	43, 1027, 1850, 1961
BseYI	CCCAGC	1 cut(s)	1499
BsgI	GTGCAG	1 cut(s)	1968
Bsh1236I	CGCG	1 cut(s)	1086
BshFI	GGCC	6 cut(s)	192, 266, 645, 882, 1675, 1908
BshNI	GGYRCC	1 cut(s)	1504
BshVI	ATCGAT	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	44, 258
BsiHKCI	CYCGRG	2 cut(s)	582, 1821
BsiSI	CCGG	1 cut(s)	231
BslI	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1382, 1441, 1463, 1464
BsmAI	GTCTC	1 cut(s)	302
BsmI	GAATGC	1 cut(s)	546
BsnI	GGCC	6 cut(s)	192, 266, 645, 882, 1675, 1908
Bso31I	GGTCTC	1 cut(s)	302
BsoBI	CYCGRG	2 cut(s)	582, 1821
Bsp120I	GGGCCC	1 cut(s)	1906
Bsp1286I	GDGCHC	5 cut(s)	44, 258, 1428, 1507, 1910
Bsp1407I	TGTACA	1 cut(s)	933
Bsp143I	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
BspACI	CCGC	6 cut(s)	154, 368, 405, 1003, 1086, 1160
BspANI	GGCC	6 cut(s)	192, 266, 645, 882, 1675, 1908
BspCNI	CTCAG	3 cut(s)	327, 733, 1429
BspDI	ATCGAT	1 cut(s)	48
BspFNI	CGCG	1 cut(s)	1086
BspLI	GGNNCC	4 cut(s)	31, 193, 1506, 1908
BspMI	ACCTGC	3 cut(s)	1286, 1504, 1943
BspPI	GGATC	1 cut(s)	1151
BspT107I	GGYRCC	1 cut(s)	1504
BspTI	CTTAAG	1 cut(s)	998
BspTNI	GGTCTC	1 cut(s)	302
BsrGI	TGTACA	1 cut(s)	933
BsrI	ACTGG	7 cut(s)	623, 646, 763, 1114, 1243, 1508, 1671
BssECI	CCNNGG	3 cut(s)	72, 1350, 1560
BssMI	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
BssNAI	GTATAC	1 cut(s)	756
BssT1I	CCWWGG	1 cut(s)	1350
Bst1107I	GTATAC	1 cut(s)	756
Bst2UI	CCWGG	3 cut(s)	119, 552, 1037
Bst6I	CTCTTC	4 cut(s)	89, 278, 351, 356
BstAFI	CTTAAG	1 cut(s)	998
BstAUI	TGTACA	1 cut(s)	933
BstBAI	YACGTR	1 cut(s)	1185
BstC8I	GCNNGC	1 cut(s)	1595
BstDEI	CTNAG	4 cut(s)	314, 429, 741, 1416
BstF5I	GGATG	2 cut(s)	1247, 1360
BstFNI	CGCG	1 cut(s)	1086
BstKTI	GATC	6 cut(s)	808, 1159, 1481, 1634, 1684, 1691
BstMAI	GTCTC	1 cut(s)	302
BstMBI	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
BstMWI	GCNNNNNNNGC	5 cut(s)	374, 401, 1012, 1136, 1965
BstNI	CCWGG	3 cut(s)	119, 552, 1037
BstNSI	RCATGY	1 cut(s)	718
BstSCI	CCNGG	3 cut(s)	117, 550, 1035
BstSFI	CTRYAG	2 cut(s)	652, 1173
BstSLI	GKGCMC	2 cut(s)	1507, 1910
BstUI	CGCG	1 cut(s)	1086
BstV1I	GCAGC	4 cut(s)	43, 1027, 1850, 1961
BstX2I	RGATCY	2 cut(s)	1478, 1688
BstYI	RGATCY	2 cut(s)	1478, 1688
BstZ17I	GTATAC	1 cut(s)	756
Bsu15I	ATCGAT	1 cut(s)	48
Bsu36I	CCTNAGG	1 cut(s)	314
BsuRI	GGCC	6 cut(s)	192, 266, 645, 882, 1675, 1908
BsuTUI	ATCGAT	1 cut(s)	48
BtrI	CACGTC	1 cut(s)	1058
BtsCI	GGATG	2 cut(s)	1247, 1360
BtsIMutI	CAGTG	7 cut(s)	267, 616, 1019, 1236, 1664, 1790, 1939
BveI	ACCTGC	3 cut(s)	1286, 1504, 1943
Cac8I	GCNNGC	1 cut(s)	1595
CaiI	CAGNNNCTG	3 cut(s)	618, 1021, 1867
Cfr13I	GGNCC	6 cut(s)	191, 643, 1373, 1391, 1906, 1907
ClaI	ATCGAT	1 cut(s)	48
CseI	GACGC	1 cut(s)	782
CsiI	ACCWGGT	1 cut(s)	1035
Csp6I	GTAC	8 cut(s)	347, 667, 860, 934, 1061, 1410, 1432, 1708
CviAII	CATG	4 cut(s)	715, 884, 1459, 1805
CviQI	GTAC	8 cut(s)	347, 667, 860, 934, 1061, 1410, 1432, 1708
DdeI	CTNAG	4 cut(s)	314, 429, 741, 1416
DpnI	GATC	6 cut(s)	807, 1158, 1480, 1633, 1683, 1690
DpnII	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
EaeI	YGGCCR	1 cut(s)	880
Eam1104I	CTCTTC	4 cut(s)	89, 278, 351, 356
EarI	CTCTTC	4 cut(s)	89, 278, 351, 356
EciI	GGCGGA	2 cut(s)	143, 1149
Ecl136II	GAGCTC	2 cut(s)	42, 256
Eco130I	CCWWGG	1 cut(s)	1350
Eco147I	AGGCCT	1 cut(s)	1675
Eco24I	GRGCYC	4 cut(s)	44, 258, 1428, 1910
Eco31I	GGTCTC	1 cut(s)	302
Eco47I	GGWCC	2 cut(s)	1373, 1391
Eco53kI	GAGCTC	2 cut(s)	42, 256
Eco81I	CCTNAGG	1 cut(s)	314
Eco88I	CYCGRG	2 cut(s)	582, 1821
EcoICRI	GAGCTC	2 cut(s)	42, 256
EcoO109I	RGGNCCY	2 cut(s)	191, 1907
EcoRII	CCWGG	3 cut(s)	117, 550, 1035
EcoT14I	CCWWGG	1 cut(s)	1350
EcoT22I	ATGCAT	1 cut(s)	1649
EcoT38I	GRGCYC	4 cut(s)	44, 258, 1428, 1910
ErhI	CCWWGG	1 cut(s)	1350
FaeI	CATG	4 cut(s)	718, 887, 1462, 1808
FatI	CATG	4 cut(s)	714, 883, 1458, 1804
FauI	CCCGC	1 cut(s)	1079
FauNDI	CATATG	1 cut(s)	1873
FbaI	TGATCA	1 cut(s)	1681
FblI	GTMKAC	1 cut(s)	755
Fnu4HI	GCNGC	6 cut(s)	57, 405, 1004, 1016, 1839, 1950
FokI	GGATG	2 cut(s)	1254, 1367
FriOI	GRGCYC	4 cut(s)	44, 258, 1428, 1910
Fsp4HI	GCNGC	6 cut(s)	57, 405, 1004, 1016, 1839, 1950
FspBI	CTAG	4 cut(s)	815, 1118, 1817, 1975
GluI	GCNGC	6 cut(s)	57, 405, 1004, 1016, 1839, 1950
GsaI	CCCAGC	1 cut(s)	1503
GsuI	CTGGAG	3 cut(s)	38, 101, 1688
HaeIII	GGCC	6 cut(s)	192, 266, 645, 882, 1675, 1908
HapII	CCGG	1 cut(s)	231
HgaI	GACGC	1 cut(s)	782
Hin1II	CATG	4 cut(s)	718, 887, 1462, 1808
HincII	GTYRAC	3 cut(s)	1026, 1153, 1405
HindII	GTYRAC	3 cut(s)	1026, 1153, 1405
HindIII	AAGCTT	2 cut(s)	393, 1220
HinfI	GANTC	4 cut(s)	102, 245, 272, 1268
HpaI	GTTAAC	1 cut(s)	1026
HpaII	CCGG	1 cut(s)	231
HphI	GGTGA	4 cut(s)	382, 449, 797, 1313
Hpy188III	TCNNGA	7 cut(s)	399, 803, 815, 838, 972, 1118, 1792
HpyAV	CCTTC	8 cut(s)	427, 442, 478, 537, 955, 1404, 1600, 1912
HpyCH4IV	ACGT	4 cut(s)	820, 1057, 1184, 1215
HpyF10VI	GCNNNNNNNGC	5 cut(s)	374, 401, 1012, 1136, 1965
HpyF3I	CTNAG	4 cut(s)	314, 429, 741, 1416
HpySE526I	ACGT	4 cut(s)	820, 1057, 1184, 1215
Hsp92II	CATG	4 cut(s)	718, 887, 1462, 1808
Ksp22I	TGATCA	1 cut(s)	1681
KspAI	GTTAAC	1 cut(s)	1026
Kzo9I	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
LmnI	GCTCC	5 cut(s)	47, 253, 261, 1174, 1864
Lsp1109I	GCAGC	4 cut(s)	43, 1027, 1850, 1961
LweI	GCATC	4 cut(s)	577, 1222, 1232, 1708
MabI	ACCWGGT	1 cut(s)	1035
MaeI	CTAG	4 cut(s)	815, 1118, 1817, 1975
MaeII	ACGT	4 cut(s)	820, 1057, 1184, 1215
MaeIII	GTNAC	4 cut(s)	287, 899, 1178, 1883
MalI	GATC	6 cut(s)	807, 1158, 1480, 1633, 1683, 1690
MboI	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
MfeI	CAATTG	1 cut(s)	1246
MflI	RGATCY	2 cut(s)	1478, 1688
MhlI	GDGCHC	5 cut(s)	44, 258, 1428, 1507, 1910
MlsI	TGGCCA	1 cut(s)	882
MluNI	TGGCCA	1 cut(s)	882
MlyI	GAGTC	3 cut(s)	111, 239, 266
Mox20I	TGGCCA	1 cut(s)	882
Mph1103I	ATGCAT	1 cut(s)	1649
MscI	TGGCCA	1 cut(s)	882
MseI	TTAA	8 cut(s)	491, 987, 999, 1025, 1050, 1296, 1340, 1659
MslI	CAYNNNNRTG	3 cut(s)	1326, 1761, 1944
Msp20I	TGGCCA	1 cut(s)	882
MspCI	CTTAAG	1 cut(s)	998
MspI	CCGG	1 cut(s)	231
MspR9I	CCNGG	3 cut(s)	119, 552, 1037
MunI	CAATTG	1 cut(s)	1246
Mva1269I	GAATGC	1 cut(s)	546
MvaI	CCWGG	3 cut(s)	119, 552, 1037
MvnI	CGCG	1 cut(s)	1086
MwoI	GCNNNNNNNGC	5 cut(s)	374, 401, 1012, 1136, 1965
NdeI	CATATG	1 cut(s)	1873
NdeII	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
NlaIII	CATG	4 cut(s)	718, 887, 1462, 1808
NlaIV	GGNNCC	4 cut(s)	31, 193, 1506, 1908
NmuCI	GTSAC	1 cut(s)	287
NsiI	ATGCAT	1 cut(s)	1649
NspI	RCATGY	1 cut(s)	718
OliI	CACNNNNGTG	2 cut(s)	1761, 1944
PaeR7I	CTCGAG	1 cut(s)	1821
PceI	AGGCCT	1 cut(s)	1675
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PctI	GAATGC	1 cut(s)	546
PfeI	GAWTC	1 cut(s)	1268
PflMI	CCANNNNNTGG	3 cut(s)	16, 163, 1382
PkrI	GCNGC	6 cut(s)	58, 406, 1005, 1017, 1840, 1951
PleI	GAGTC	3 cut(s)	110, 239, 266
PpsI	GAGTC	3 cut(s)	110, 239, 266
Ppu21I	YACGTR	1 cut(s)	1185
PshBI	ATTAAT	2 cut(s)	1050, 1340
PsiI	TTATAA	1 cut(s)	1751
Psp124BI	GAGCTC	2 cut(s)	44, 258
Psp6I	CCWGG	3 cut(s)	117, 550, 1035
PspFI	CCCAGC	1 cut(s)	1499
PspGI	CCWGG	3 cut(s)	117, 550, 1035
PspN4I	GGNNCC	4 cut(s)	31, 193, 1506, 1908
PspOMI	GGGCCC	1 cut(s)	1906
PspPI	GGNCC	6 cut(s)	191, 643, 1373, 1391, 1906, 1907
PspXI	VCTCGAGB	1 cut(s)	1821
PsrI	GAACNNNNNNTAC	2 cut(s)	843, 875
PstNI	CAGNNNCTG	3 cut(s)	618, 1021, 1867
PsuI	RGATCY	2 cut(s)	1478, 1688
RsaI	GTAC	8 cut(s)	348, 668, 861, 935, 1062, 1411, 1433, 1709
RsaNI	GTAC	8 cut(s)	347, 667, 860, 934, 1061, 1410, 1432, 1708
RseI	CAYNNNNRTG	3 cut(s)	1326, 1761, 1944
SacI	GAGCTC	2 cut(s)	44, 258
SaqAI	TTAA	8 cut(s)	491, 987, 999, 1025, 1050, 1296, 1340, 1659
SatI	GCNGC	6 cut(s)	57, 405, 1004, 1016, 1839, 1950
Sau3AI	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
Sau96I	GGNCC	6 cut(s)	191, 643, 1373, 1391, 1906, 1907
ScaI	AGTACT	1 cut(s)	1709
SchI	GAGTC	3 cut(s)	111, 239, 266
ScrFI	CCNGG	3 cut(s)	119, 552, 1037
SduI	GDGCHC	5 cut(s)	44, 258, 1428, 1507, 1910
SexAI	ACCWGGT	1 cut(s)	1035
SfaNI	GCATC	4 cut(s)	577, 1222, 1232, 1708
SfcI	CTRYAG	2 cut(s)	652, 1173
Sfr274I	CTCGAG	1 cut(s)	1821
SinI	GGWCC	2 cut(s)	1373, 1391
SlaI	CTCGAG	1 cut(s)	1821
SmiMI	CAYNNNNRTG	3 cut(s)	1326, 1761, 1944
SmlI	CTYRAG	6 cut(s)	836, 998, 1007, 1427, 1792, 1821
SmoI	CTYRAG	6 cut(s)	836, 998, 1007, 1427, 1792, 1821
SseBI	AGGCCT	1 cut(s)	1675
SsiI	CCGC	6 cut(s)	154, 368, 405, 1003, 1086, 1160
SspI	AATATT	1 cut(s)	1738
SspMI	CTAG	4 cut(s)	815, 1118, 1817, 1975
SstI	GAGCTC	2 cut(s)	44, 258
StuI	AGGCCT	1 cut(s)	1675
StyD4I	CCNGG	3 cut(s)	117, 550, 1035
StyI	CCWWGG	1 cut(s)	1350
TaiI	ACGT	4 cut(s)	823, 1060, 1187, 1218
TaqI	TCGA	4 cut(s)	48, 174, 802, 1822
TatI	WGTACW	3 cut(s)	666, 933, 1707
TauI	GCSGC	2 cut(s)	407, 1006
TfiI	GAWTC	1 cut(s)	1268
Tru1I	TTAA	8 cut(s)	491, 987, 999, 1025, 1050, 1296, 1340, 1659
Tru9I	TTAA	8 cut(s)	491, 987, 999, 1025, 1050, 1296, 1340, 1659
TscAI	CASTG	7 cut(s)	274, 623, 1026, 1243, 1671, 1790, 1946
TseFI	GTSAC	1 cut(s)	287
TseI	GCWGC	4 cut(s)	56, 1015, 1838, 1949
Tsp45I	GTSAC	1 cut(s)	287
TspDTI	ATGAA	4 cut(s)	515, 735, 1475, 1619
TspGWI	ACGGA	2 cut(s)	22, 1302
TspRI	CASTG	7 cut(s)	274, 623, 1026, 1243, 1671, 1790, 1946
Van91I	CCANNNNNTGG	3 cut(s)	16, 163, 1382
Vha464I	CTTAAG	1 cut(s)	998
VpaK11BI	GGWCC	2 cut(s)	1373, 1391
VspI	ATTAAT	2 cut(s)	1050, 1340
XapI	RAATTY	3 cut(s)	516, 912, 1567
XbaI	TCTAGA	2 cut(s)	814, 1117
XceI	RCATGY	1 cut(s)	718
XhoI	CTCGAG	1 cut(s)	1821
XmiI	GTMKAC	1 cut(s)	755
XspI	CTAG	4 cut(s)	815, 1118, 1817, 1975
ZrmI	AGTACT	1 cut(s)	1709
Zsp2I	ATGCAT	1 cut(s)	1649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.