Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Reverse (-)

9861050 .. 9866656

Gene Structure 5607 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1130100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGGTGAACTGAACGATTCCGCCGCTCATCGCAGGGTTAGCCCCCGGCTGCAGAACGTTCCGGCGGAGAAACGGCCTTTTTACGGGAGTCCGAAGCGGATGGCTGATGAGACCAAGGACGGCGTCATCAGGACCAAGAAGACCAAGGTTGCGAAACCCCCTAAACCGCCGGTGCAGAGTTCTAAGCCTGAAGCTGAACCGAGCAAGGGAGAAGTGACAATGGAGAGCAGCGAGAGCAAAGTGACACTGGAGAGTGGCGAGAGCAAGGATTGTGTGGATTGGAGTTGGTATACAGCTGCTGATTTGCCTTTGACTGATGAGAACGGTGTGAGCTACACTGCTCGCGTGAGGGAGACACTCCGAGCTTTCAATTTGCATTACCTTCACCATGTTCAGGAAGAGGAGAAAAGATGTTGTAAGCCTGAGAATGGGAGTCCTATCAAGAGTCCTTCCAAAAAACCTCCCAAAGGGCCTTCGATGAGTCCTTCCAAGAAAACTGATAAGAAGAATGATGATGAACCTAAGAAGCAGTCCAAGAGACCTGATCTGAAGGCACTTTCCGAGATGCTCAAGGAGAATCAAATTTTATTCCCTGAAAAGCAAATTGGTCATCTTCCGGGTATTGCTGTTGGGCATCAATTTTACTCCCGGGCTGAAATGGTGGCTTTAAGGTTCCATTCACACTGGTTAAATGGAATTGATTTTGTAGGAGAATCTAAAGGCAAGGTGGAGAAATTCAGAGGCTATAAGCTTCCATTTGCCTTAACAATTGTGGTTTCTGGCCAATATGAAGATGATGTTGATAACGCAGAAGAGATTGTTTATACTGGTCAAGGTGGAAATGATTTGCTTGGTAATAAACAACAAATTGCAGATCAAGTTATGAAACGGGGTAATTTGGCTCTTAAGAATAATATGGACCAGGGCATTCCTGTTAGAGTTGTCCGTGGACATGACTGCGTCAATAGTTATACTAGTAAAGTTTATACGTATGATGGCCTATACAAGGTTAACAATTATTGGGCAGAAAAGGGTGTTGCTGGATTTACCGTGTTTAAGTATCGTTTAAAGCGACTTCCAGGGCAAGATAGTTTGCGTAGTAAACAGGTAAATTTTGTTCGTGCGCGAGGGTCTAAAGTTCACGCTGAATTACCTGGGTTGGTGTGCAAGGACATTTGCAACGGTCTAGAAAATATTTGCATTCCAGCTACGAACGTCATTGATAAACCTCCTATAGCGCCTGAAGGCCTTAAATATATTAACTCTATTATAGTTGAAAAAGATGTGAACATTCCACCGAACGCTCCCGGGTGCAGTTGCAAAGGAAACTGTACTAATCCACTGACTTGCTCTTGTGCTCAACTGAATGGCGGCGATTTTCCTTACGTTAGTAAAGATGGTGGAAGATTAATTGAGGCAAAGGCTGTTGTGTTTGAGTGTGGTCCAAATTGCGGCTGTGGACCTGGTTGTGTTAACCGTTCATCTCAGCGGGGAATGAAGCATCGACTTGAGGTATTTCGTACGGATTACAAAGGCTGGGGTGTTAGGTCGTGGGACTTTATTCCTTCTGGTGCACCAGTATGTGAATACATTGGAGTTCTTAGGAAGACTGATGAAGTTGACAGTCTCTTGGGGAACGAATATATATTTGAAATTGATTGCTGGCATACAATGCATGGGATTGGGTCAAGAGAGAAGCGAATGTGCGATGTGACTATTCCAAATGGTGATGCAGAGTCAGGATTCAGCAAGCTATCAGAAAGTGAGCCTGAGTTTTGCATAGATGCCGCTTCTCATGGCAACGTTACTAGATATATCAATCATAGTTGTGAGCCTAACCTCTTCGTACAATGTGTTTTGAGCTCTCATCATGATGTTAGACTCGCTAGAATTGTGTTGTTCGCCGCGGATAATATACCTCCATTGCAGGAACTTTCATATGACTATGGTTATGAACTTGATAGCGTGGTCGGTCTTGATGGAAAAATTAAGCAGTTAGCCTGCCATTGCGGTGCAGTTGGCTGTCGGAAGCGTTTGTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

681

Amino Acids

75.5

Weight (kDa)

8.41

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	202 - 362	4.7e-50	SAD/SRA domain
Pre-SET	PF05033	395 - 493	2.2e-16	Pre-SET motif
SET	PF00856	512 - 650	1.8e-18	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	26
AccI	GTMKAC	1 cut(s)	290
AccII	CGCG	3 cut(s)	345, 1126, 1907
AclI	AACGTT	2 cut(s)	57, 1803
AcoI	YGGCCR	1 cut(s)	781
AcsI	RAATTY	3 cut(s)	582, 734, 1111
AcuI	CTGAAG	3 cut(s)	210, 569, 1263
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	4 cut(s)	1333, 1522, 1848, 2039
AfiI	CCNNNNNNNGG	7 cut(s)	83, 206, 394, 428, 467, 1006, 1451
AflII	CTTAAG	1 cut(s)	905
AgsI	TTSAA	3 cut(s)	370, 1277, 1652
AhlI	ACTAGT	1 cut(s)	974
AjnI	CCWGG	4 cut(s)	921, 1078, 1153, 1462
AjuI	GAANNNNNNNTTGG	2 cut(s)	588, 620
AluBI	AGCT	8 cut(s)	194, 296, 333, 365, 751, 1208, 1753, 1863
AluI	AGCT	8 cut(s)	194, 296, 333, 365, 751, 1208, 1753, 1863
Alw21I	GWGCWC	3 cut(s)	1360, 1576, 1865
Alw26I	GTCTC	4 cut(s)	104, 347, 532, 1631
Alw44I	GTGCAC	1 cut(s)	1572
AlwNI	CAGNNNCTG	1 cut(s)	299
Ama87I	CYCGRG	2 cut(s)	648, 1307
AoxI	GGCC	5 cut(s)	74, 470, 781, 997, 1246
ApaLI	GTGCAC	1 cut(s)	1572
ApeKI	GCWGC	3 cut(s)	49, 228, 296
ApoI	RAATTY	3 cut(s)	582, 734, 1111
AseI	ATTAAT	1 cut(s)	1409
AspLEI	GCGC	2 cut(s)	1126, 1240
AspS9I	GGNCC	5 cut(s)	132, 470, 919, 1442, 1460
AsuC2I	CCSGG	6 cut(s)	46, 618, 649, 650, 1308, 1309
AsuHPI	GGTGA	3 cut(s)	17, 377, 1739
AvaI	CYCGRG	2 cut(s)	648, 1307
AvaII	GGWCC	4 cut(s)	132, 919, 1442, 1460
BaeGI	GKGCMC	1 cut(s)	1576
BalI	TGGCCA	1 cut(s)	783
BanII	GRGCYC	1 cut(s)	1865
BarI	GAAGNNNNNNTAC	1 cut(s)	2021
BbsI	GAAGAC	2 cut(s)	146, 1613
Bbv12I	GWGCWC	3 cut(s)	1360, 1576, 1865
BbvI	GCAGC	3 cut(s)	36, 240, 283
BccI	CCATC	4 cut(s)	94, 989, 1391, 1973
BceAI	ACGGC	2 cut(s)	89, 136
BciT130I	CCWGG	4 cut(s)	923, 1080, 1155, 1464
BcnI	CCSGG	6 cut(s)	46, 618, 649, 650, 1308, 1309
BcoDI	GTCTC	4 cut(s)	104, 347, 532, 1631
BcuI	ACTAGT	1 cut(s)	974
BfaI	CTAG	5 cut(s)	975, 1187, 1809, 1887, 2041
BfmI	CTRYAG	2 cut(s)	50, 1233
BfoI	RGCGCY	1 cut(s)	1241
BfrI	CTTAAG	1 cut(s)	905
BisI	GCNGC	8 cut(s)	24, 50, 229, 297, 1372, 1453, 1788, 1905
BlsI	GCNGC	8 cut(s)	25, 51, 230, 298, 1373, 1454, 1789, 1906
Bme18I	GGWCC	4 cut(s)	132, 919, 1442, 1460
BmeT110I	CYCGRG	2 cut(s)	648, 1307
BmgT120I	GGNCC	5 cut(s)	132, 470, 919, 1442, 1460
BmiI	GGNNCC	1 cut(s)	674
BmsI	GCATC	5 cut(s)	555, 643, 1510, 1720, 1774
BpiI	GAAGAC	2 cut(s)	146, 1613
BpmI	CTGGAG	1 cut(s)	269
BpuEI	CTTGAG	2 cut(s)	554, 1529
BpuMI	CCSGG	6 cut(s)	46, 618, 649, 650, 1308, 1309
BsaAI	YACGTR	1 cut(s)	990
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	2 cut(s)	104, 532
Bsc4I	CCNNNNNNNGG	7 cut(s)	83, 206, 394, 428, 467, 1006, 1451
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	4 cut(s)	252, 689, 832, 1577
Bse3DI	GCAATG	2 cut(s)	1922, 2005
BseBI	CCWGG	4 cut(s)	923, 1080, 1155, 1464
BseGI	GGATG	1 cut(s)	105
BseLI	CCNNNNNNNGG	7 cut(s)	83, 206, 394, 428, 467, 1006, 1451
BseMI	GCAATG	2 cut(s)	1922, 2005
BseMII	CTCAG	3 cut(s)	414, 1499, 1761
BseNI	ACTGG	4 cut(s)	252, 689, 832, 1577
BseRI	GAGGAG	1 cut(s)	416
BseSI	GKGCMC	1 cut(s)	1576
BseXI	GCAGC	3 cut(s)	36, 240, 283
BseYI	CCCAGC	1 cut(s)	1536
BsgI	GTGCAG	3 cut(s)	194, 1333, 2034
Bsh1236I	CGCG	3 cut(s)	345, 1126, 1907
BshFI	GGCC	5 cut(s)	76, 472, 783, 999, 1248
BsiHKAI	GWGCWC	3 cut(s)	1360, 1576, 1865
BsiHKCI	CYCGRG	2 cut(s)	648, 1307
BsiSI	CCGG	6 cut(s)	46, 62, 170, 617, 649, 1308
BsiWI	CGTACG	1 cut(s)	1520
BslFI	GGGAC	1 cut(s)	1568
BslI	CCNNNNNNNGG	7 cut(s)	83, 206, 394, 428, 467, 1006, 1451
BsmAI	GTCTC	4 cut(s)	104, 347, 532, 1631
BsmFI	GGGAC	1 cut(s)	1568
BsmI	GAATGC	2 cut(s)	927, 1200
BsnI	GGCC	5 cut(s)	76, 472, 783, 999, 1248
Bso31I	GGTCTC	2 cut(s)	104, 532
BsoBI	CYCGRG	2 cut(s)	648, 1307
Bsp1286I	GDGCHC	3 cut(s)	1360, 1576, 1865
Bsp143I	GATC	2 cut(s)	544, 874
BspANI	GGCC	5 cut(s)	76, 472, 783, 999, 1248
BspCNI	CTCAG	3 cut(s)	415, 1498, 1762
BspFNI	CGCG	3 cut(s)	345, 1126, 1907
BspHI	TCATGA	1 cut(s)	1870
BspLI	GGNNCC	1 cut(s)	674
BspMAI	CTGCAG	1 cut(s)	54
BspTI	CTTAAG	1 cut(s)	905
BspTNI	GGTCTC	2 cut(s)	104, 532
BsrBI	CCGCTC	1 cut(s)	26
BsrDI	GCAATG	2 cut(s)	1922, 2005
BsrFI	RCCGGY	1 cut(s)	169
BsrI	ACTGG	4 cut(s)	252, 689, 832, 1577
BssAI	RCCGGY	1 cut(s)	169
BssMI	GATC	2 cut(s)	544, 874
BssNAI	GTATAC	1 cut(s)	291
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	2 cut(s)	114, 144
Bst1107I	GTATAC	1 cut(s)	291
Bst2UI	CCWGG	4 cut(s)	923, 1080, 1155, 1464
Bst4CI	ACNGT	6 cut(s)	326, 1051, 1184, 1331, 1478, 1625
Bst6I	CTCTTC	3 cut(s)	393, 807, 1847
BstACI	GRCGYC	1 cut(s)	123
BstAFI	CTTAAG	1 cut(s)	905
BstAPI	GCANNNNNTGC	1 cut(s)	1672
BstBAI	YACGTR	1 cut(s)	990
BstC8I	GCNNGC	4 cut(s)	343, 1664, 1751, 2002
BstDEI	CTNAG	6 cut(s)	183, 423, 522, 1485, 1601, 1770
BstDSI	CCRYGG	2 cut(s)	946, 1905
BstENI	CCTNNNNNAGG	2 cut(s)	465, 1004
BstF5I	GGATG	1 cut(s)	105
BstFNI	CGCG	3 cut(s)	345, 1126, 1907
BstH2I	RGCGCY	1 cut(s)	1241
BstHHI	GCGC	2 cut(s)	1126, 1240
BstKTI	GATC	2 cut(s)	547, 877
BstMAI	GTCTC	4 cut(s)	104, 347, 532, 1631
BstMBI	GATC	2 cut(s)	544, 874
BstMWI	GCNNNNNNNGC	3 cut(s)	39, 234, 1672
BstNI	CCWGG	4 cut(s)	923, 1080, 1155, 1464
BstSFI	CTRYAG	2 cut(s)	50, 1233
BstSLI	GKGCMC	1 cut(s)	1576
BstSNI	TACGTA	1 cut(s)	990
BstUI	CGCG	3 cut(s)	345, 1126, 1907
BstV1I	GCAGC	3 cut(s)	36, 240, 283
BstV2I	GAAGAC	2 cut(s)	146, 1613
BstZ17I	GTATAC	1 cut(s)	291
BsuRI	GGCC	5 cut(s)	76, 472, 783, 999, 1248
BtgI	CCRYGG	2 cut(s)	946, 1905
BtgZI	GCGATG	2 cut(s)	14, 1722
BtsCI	GGATG	1 cut(s)	105
BtsI	GCAGTG	1 cut(s)	336
BtsIMutI	CAGTG	4 cut(s)	245, 336, 682, 1340
Cac8I	GCNNGC	4 cut(s)	343, 1664, 1751, 2002
CaiI	CAGNNNCTG	1 cut(s)	299
CciI	TCATGA	1 cut(s)	1870
CfoI	GCGC	2 cut(s)	1126, 1240
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	5 cut(s)	132, 470, 919, 1442, 1460
Cfr42I	CCGCGG	1 cut(s)	1908
Cfr9I	CCCGGG	2 cut(s)	648, 1307
CseI	GACGC	2 cut(s)	112, 949
CsiI	ACCWGGT	1 cut(s)	1462
Csp6I	GTAC	4 cut(s)	1332, 1521, 1847, 2038
CviAII	CATG	5 cut(s)	389, 953, 1676, 1796, 1871
CviQI	GTAC	4 cut(s)	1332, 1521, 1847, 2038
DdeI	CTNAG	6 cut(s)	183, 423, 522, 1485, 1601, 1770
DpnI	GATC	2 cut(s)	546, 876
DpnII	GATC	2 cut(s)	544, 874
DraI	TTTAAA	1 cut(s)	1068
EaeI	YGGCCR	1 cut(s)	781
Eam1104I	CTCTTC	3 cut(s)	393, 807, 1847
EarI	CTCTTC	3 cut(s)	393, 807, 1847
EciI	GGCGGA	2 cut(s)	10, 80
Ecl136II	GAGCTC	1 cut(s)	1863
Eco105I	TACGTA	1 cut(s)	990
Eco130I	CCWWGG	2 cut(s)	114, 144
Eco147I	AGGCCT	1 cut(s)	1248
Eco24I	GRGCYC	1 cut(s)	1865
Eco31I	GGTCTC	2 cut(s)	104, 532
Eco47I	GGWCC	4 cut(s)	132, 919, 1442, 1460
Eco53kI	GAGCTC	1 cut(s)	1863
Eco57I	CTGAAG	3 cut(s)	210, 569, 1263
Eco88I	CYCGRG	2 cut(s)	648, 1307
EcoICRI	GAGCTC	1 cut(s)	1863
EcoNI	CCTNNNNNAGG	2 cut(s)	465, 1004
EcoO109I	RGGNCCY	1 cut(s)	470
EcoRII	CCWGG	4 cut(s)	921, 1078, 1153, 1462
EcoT14I	CCWWGG	2 cut(s)	114, 144
EcoT22I	ATGCAT	1 cut(s)	1677
EcoT38I	GRGCYC	1 cut(s)	1865
ErhI	CCWWGG	2 cut(s)	114, 144
FaeI	CATG	5 cut(s)	392, 956, 1679, 1799, 1874
FaqI	GGGAC	1 cut(s)	1568
FatI	CATG	5 cut(s)	388, 952, 1675, 1795, 1870
FauI	CCCGC	1 cut(s)	1482
FauNDI	CATATG	1 cut(s)	1939
FblI	GTMKAC	1 cut(s)	290
Fnu4HI	GCNGC	8 cut(s)	24, 50, 229, 297, 1372, 1453, 1788, 1905
FokI	GGATG	1 cut(s)	112
FriOI	GRGCYC	1 cut(s)	1865
Fsp4HI	GCNGC	8 cut(s)	24, 50, 229, 297, 1372, 1453, 1788, 1905
FspBI	CTAG	5 cut(s)	975, 1187, 1809, 1887, 2041
GlaI	GCGC	2 cut(s)	1125, 1239
GluI	GCNGC	8 cut(s)	24, 50, 229, 297, 1372, 1453, 1788, 1905
GsaI	CCCAGC	1 cut(s)	1540
GsuI	CTGGAG	1 cut(s)	269
HaeII	RGCGCY	1 cut(s)	1241
HaeIII	GGCC	5 cut(s)	76, 472, 783, 999, 1248
HapII	CCGG	6 cut(s)	46, 62, 170, 617, 649, 1308
HgaI	GACGC	2 cut(s)	112, 949
HhaI	GCGC	2 cut(s)	1126, 1240
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	5 cut(s)	392, 956, 1679, 1799, 1874
Hin6I	GCGC	2 cut(s)	1124, 1238
HinP1I	GCGC	2 cut(s)	1124, 1238
HincII	GTYRAC	3 cut(s)	1012, 1474, 1621
HindII	GTYRAC	3 cut(s)	1012, 1474, 1621
HindIII	AAGCTT	1 cut(s)	749
HpaI	GTTAAC	2 cut(s)	1012, 1474
HpaII	CCGG	6 cut(s)	46, 62, 170, 617, 649, 1308
HphI	GGTGA	3 cut(s)	17, 377, 1739
Hpy188I	TCNGA	7 cut(s)	93, 362, 549, 562, 740, 1759, 2028
Hpy188III	TCNNGA	8 cut(s)	130, 395, 442, 1187, 1689, 1740, 1871, 1976
HpyAV	CCTTC	7 cut(s)	392, 459, 483, 495, 544, 1238, 1575
HpyCH4III	ACNGT	6 cut(s)	326, 1051, 1184, 1331, 1478, 1625
HpyCH4IV	ACGT	5 cut(s)	57, 989, 1215, 1386, 1803
HpyF10VI	GCNNNNNNNGC	3 cut(s)	39, 234, 1672
HpyF3I	CTNAG	6 cut(s)	183, 423, 522, 1485, 1601, 1770
HpySE526I	ACGT	5 cut(s)	57, 989, 1215, 1386, 1803
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	5 cut(s)	392, 956, 1679, 1799, 1874
HspAI	GCGC	2 cut(s)	1124, 1238
KspAI	GTTAAC	2 cut(s)	1012, 1474
KspI	CCGCGG	1 cut(s)	1908
Kzo9I	GATC	2 cut(s)	544, 874
LmnI	GCTCC	1 cut(s)	1309
Lsp1109I	GCAGC	3 cut(s)	36, 240, 283
LweI	GCATC	5 cut(s)	555, 643, 1510, 1720, 1774
MabI	ACCWGGT	1 cut(s)	1462
MaeI	CTAG	5 cut(s)	975, 1187, 1809, 1887, 2041
MaeII	ACGT	5 cut(s)	57, 989, 1215, 1386, 1803
MaeIII	GTNAC	4 cut(s)	214, 241, 1711, 1804
MalI	GATC	2 cut(s)	546, 876
MbiI	CCGCTC	1 cut(s)	26
MboI	GATC	2 cut(s)	544, 874
MboII	GAAGA	9 cut(s)	151, 410, 517, 605, 803, 824, 1416, 1618, 1834
MfeI	CAATTG	1 cut(s)	768
MhlI	GDGCHC	3 cut(s)	1360, 1576, 1865
MlsI	TGGCCA	1 cut(s)	783
MluNI	TGGCCA	1 cut(s)	783
MlyI	GAGTC	6 cut(s)	97, 442, 454, 490, 1745, 1875
MmeI	TCCRAC	1 cut(s)	2006
Mox20I	TGGCCA	1 cut(s)	783
Mph1103I	ATGCAT	1 cut(s)	1677
MscI	TGGCCA	1 cut(s)	783
MslI	CAYNNNNRTG	4 cut(s)	1579, 1827, 1872, 2010
Msp20I	TGGCCA	1 cut(s)	783
MspA1I	CMGCKG	3 cut(s)	296, 1489, 1907
MspCI	CTTAAG	1 cut(s)	905
MspI	CCGG	6 cut(s)	46, 62, 170, 617, 649, 1308
MunI	CAATTG	1 cut(s)	768
Mva1269I	GAATGC	2 cut(s)	927, 1200
MvaI	CCWGG	4 cut(s)	923, 1080, 1155, 1464
MvnI	CGCG	3 cut(s)	345, 1126, 1907
MwoI	GCNNNNNNNGC	3 cut(s)	39, 234, 1672
NciI	CCSGG	6 cut(s)	46, 618, 649, 650, 1308, 1309
NdeI	CATATG	1 cut(s)	1939
NdeII	GATC	2 cut(s)	544, 874
NlaIII	CATG	5 cut(s)	392, 956, 1679, 1799, 1874
NlaIV	GGNNCC	1 cut(s)	674
NmuCI	GTSAC	3 cut(s)	214, 241, 1711
NsiI	ATGCAT	1 cut(s)	1677
PagI	TCATGA	1 cut(s)	1870
PceI	AGGCCT	1 cut(s)	1248
PcsI	WCGNNNNNNNCGW	1 cut(s)	1069
PctI	GAATGC	2 cut(s)	927, 1200
PfeI	GAWTC	4 cut(s)	17, 577, 713, 1743
Pfl23II	CGTACG	1 cut(s)	1520
PflFI	GACNNNGTC	2 cut(s)	122, 959
PkrI	GCNGC	8 cut(s)	25, 51, 230, 298, 1373, 1454, 1789, 1906
PleI	GAGTC	6 cut(s)	96, 441, 453, 489, 1744, 1875
PpsI	GAGTC	6 cut(s)	96, 441, 453, 489, 1744, 1875
Ppu21I	YACGTR	1 cut(s)	990
PshBI	ATTAAT	1 cut(s)	1409
Psp124BI	GAGCTC	1 cut(s)	1865
Psp1406I	AACGTT	2 cut(s)	57, 1803
Psp6I	CCWGG	4 cut(s)	921, 1078, 1153, 1462
PspFI	CCCAGC	1 cut(s)	1536
PspGI	CCWGG	4 cut(s)	921, 1078, 1153, 1462
PspLI	CGTACG	1 cut(s)	1520
PspN4I	GGNNCC	1 cut(s)	674
PspPI	GGNCC	5 cut(s)	132, 470, 919, 1442, 1460
PsrI	GAACNNNNNNTAC	2 cut(s)	1101, 1133
PstI	CTGCAG	1 cut(s)	54
PstNI	CAGNNNCTG	1 cut(s)	299
PsyI	GACNNNGTC	2 cut(s)	122, 959
PvuII	CAGCTG	1 cut(s)	296
RsaI	GTAC	4 cut(s)	1333, 1522, 1848, 2039
RsaNI	GTAC	4 cut(s)	1332, 1521, 1847, 2038
RseI	CAYNNNNRTG	4 cut(s)	1579, 1827, 1872, 2010
SacI	GAGCTC	1 cut(s)	1865
SacII	CCGCGG	1 cut(s)	1908
SatI	GCNGC	8 cut(s)	24, 50, 229, 297, 1372, 1453, 1788, 1905
Sau3AI	GATC	2 cut(s)	544, 874
Sau96I	GGNCC	5 cut(s)	132, 470, 919, 1442, 1460
SchI	GAGTC	6 cut(s)	97, 442, 454, 490, 1745, 1875
SduI	GDGCHC	3 cut(s)	1360, 1576, 1865
SexAI	ACCWGGT	1 cut(s)	1462
SfaNI	GCATC	5 cut(s)	555, 643, 1510, 1720, 1774
SfcI	CTRYAG	2 cut(s)	50, 1233
Sfr303I	CCGCGG	1 cut(s)	1908
SgrAI	CRCCGGYG	1 cut(s)	169
SgrBI	CCGCGG	1 cut(s)	1908
SinI	GGWCC	4 cut(s)	132, 919, 1442, 1460
SmaI	CCCGGG	2 cut(s)	650, 1309
SmiMI	CAYNNNNRTG	4 cut(s)	1579, 1827, 1872, 2010
SmlI	CTYRAG	3 cut(s)	569, 905, 1508
SmoI	CTYRAG	3 cut(s)	569, 905, 1508
SnaBI	TACGTA	1 cut(s)	990
SpeI	ACTAGT	1 cut(s)	974
SseBI	AGGCCT	1 cut(s)	1248
SspI	AATATT	1 cut(s)	1195
SspMI	CTAG	5 cut(s)	975, 1187, 1809, 1887, 2041
SstI	GAGCTC	1 cut(s)	1865
StuI	AGGCCT	1 cut(s)	1248
StyI	CCWWGG	2 cut(s)	114, 144
TaaI	ACNGT	6 cut(s)	326, 1051, 1184, 1331, 1478, 1625
TaiI	ACGT	5 cut(s)	60, 992, 1218, 1389, 1806
TaqI	TCGA	2 cut(s)	476, 1504
TaqII	GACCGA	1 cut(s)	1961
TatI	WGTACW	2 cut(s)	1331, 2037
TauI	GCSGC	5 cut(s)	26, 1374, 1455, 1790, 1907
TfiI	GAWTC	4 cut(s)	17, 577, 713, 1743
TscAI	CASTG	4 cut(s)	252, 343, 689, 1347
TseFI	GTSAC	3 cut(s)	214, 241, 1711
TseI	GCWGC	3 cut(s)	49, 228, 296
Tsp45I	GTSAC	3 cut(s)	214, 241, 1711
TspDTI	ATGAA	8 cut(s)	531, 804, 899, 1470, 1511, 1629, 1926, 1968
TspGWI	ACGGA	2 cut(s)	935, 1538
TspMI	CCCGGG	2 cut(s)	648, 1307
TspRI	CASTG	4 cut(s)	252, 343, 689, 1347
Tth111I	GACNNNGTC	2 cut(s)	122, 959
Vha464I	CTTAAG	1 cut(s)	905
VneI	GTGCAC	1 cut(s)	1572
VpaK11BI	GGWCC	4 cut(s)	132, 919, 1442, 1460
VspI	ATTAAT	1 cut(s)	1409
XagI	CCTNNNNNAGG	2 cut(s)	465, 1004
XapI	RAATTY	3 cut(s)	582, 734, 1111
XbaI	TCTAGA	1 cut(s)	1186
XmaI	CCCGGG	2 cut(s)	648, 1307
XmiI	GTMKAC	1 cut(s)	290
XspI	CTAG	5 cut(s)	975, 1187, 1809, 1887, 2041
Zsp2I	ATGCAT	1 cut(s)	1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.