Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Reverse (-)

83218116 .. 83222965

Gene Structure 4850 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022419

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGTAGTCCAATCGCTGGAGGGCGTGGGTTCCGTTCAGAGCTCCATCGACGTTGCTGCAAACCCACATTCCGAGGACAATTCCTCGCCGAAGAAGAGGAGAGTCAGCTCTCGGCTCCAGGTCAAGCAGAAACCCCAAAAGGAACTTCTCGTCCGCCAGAGAGTGGAATTACTCGATGACAACGAACAAGGCCCCAGAAAGAAACAAGCAAATGTCAGGGGTAGGCAAACCGGAGAGGTTGCCGACTCGGAGGAGCTCCCAAAGGCCACTGACTCGGTTGAGAAGAGTGACCGTGTTAGGGTCAAAGAGACCCTCAGGTTGTTCAACAAGCATTATCTCTATTTTGTACAGGAGGAAGAGAAGAGGGCGGTGAAAGCAGAAGCTCAGAAGAAAGCTTCCAGAGCTGCAAAGAGAGGTGCAAAAAACTCTAAGAAGGGTGATTTGAAGGCAGATACAAAGGTGGCAAAACGACCTGATTTGAAGGCATTAACCAAGATGAATGACGAAAAAGAAATTTTGTTTCCTTCTAAAAGATTTGGAAGCATTCCAGGTATTGATGTCGGGCATCAGTTCTATTCTCGGGCTGAAATGGTTGCTGTTGGTTTCCACAGCCACTGGCTGAACGGGATTGATTATATGGGCCAGTCCTATAGTAAAGGGAAGTACAGCAACTATACAATGCCACTTGCAGTTGCTATTGTTATATCAGGCATGTATGAAGATGATTTGGACAATGCTGAGGAAGTTGTGTATACTGGTCAAGGTGGACATAATTTGACAGGTGATAAGCGTCAATTTCGAGATCAAGTTCTAGAACGTGGTAATTTGGCACTCAAGAATTGTGTGGAACAAGATGTACCTGTTAGAGTAGTTCGTGGCCATGATTGTAAAAGTAGTTACTGTGGCAAAATTTACACTTATGATGGACTGTACAAGGTTGTGAAGTATTGGGCAGAGAAGGGTATTTCTGGATTTACTGTTTTTAAGTATCGTCTTAAGCGGCTTGAGGGGCAGCCACTGTTAACCACCAACCAGGTTCAATTTATTAATGGACGTGTACCACAATCTATATCAGAAATACGCGGGTTGGTGTGCGAGGACATAACTGGGGGTCTAGAGGATATTGCCATTCCAGCTACCAATTTGGTCGATGATCCACCTGTTGCTCCTACAGGTTACACGTATTGCAAGTCTATTCAAGTTGCGAAAAACGTGAAGCTTCCCACAGATGCCACTGGATGCAATTGCAAAGGAAGTTGTGTAGATTCCAAGACCTGCGAATGTGCCAAACTTAACGGCTCTGACTTTCCGTATGTCCACCGTGATGGTGGCAGATTAATTGAAGCCAAGGATGTAGTGTTTGAATGTGGGCCAAAATGTGGTTGTGGACCTTCTTGTGTCAACCGTACTTCTCAGAGGGGGCTCAAGTACCGATTTGAGGTTTTCCGAACGCCCATGAAAGGGTGGGCAGTTAGATCTTGGGATTTTATACCTGCTGGGGCACCAGTTTGTGAGTATGTAGGAATACTTCGCAGGACAGAAGATGTGGATAGTGCCTCGGAGAATTATTACATTTTTGACATTGATTGTTTGCAAACAATGAAGGGCCTTGATGGGAGGGAGAGGCGATCACAAGCTGTATGCATACCAACAGTTAATTCACTGGAGAGGCCTGATGATCAGAGATCTGATAATGTGCCAGAGTACTGCATTGATGCCGGTTCTAATGGAAATATTGCCAGATTTATAAACCACAGTTGTGAGCCTAATCTGTTTGTTCAGTGTGTCTTGAGTTCACACCATGACATCAAACTAGCTCGAGTAATGCTGTTTGCAGCAGACAACATACCTCCTTTGCAGGAGCTGACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGCCCTGATGGGAAGGTAAAGAAGATGTTTTGCCACTGTGGTGCAGCAGGTTGCAGGAAACGCTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

658

Amino Acids

73.32

Weight (kDa)

8.73

Isoelectric Point (pI)

42.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	178 - 338	5.9e-52	SAD/SRA domain
Pre-SET	PF05033	371 - 469	2e-17	Pre-SET motif
SET	PF00856	488 - 627	5.7e-20	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1748
Acc36I	ACCTGC	3 cut(s)	1283, 1501, 1940
AccB1I	GGYRCC	1 cut(s)	1501
AccB7I	CCANNNNNTGG	3 cut(s)	16, 163, 1379
AccI	GTMKAC	1 cut(s)	752
AccII	CGCG	1 cut(s)	1083
AciI	CCGC	4 cut(s)	154, 368, 1000, 1083
AclWI	GGATC	1 cut(s)	1148
AcoI	YGGCCR	1 cut(s)	877
AcsI	RAATTY	2 cut(s)	513, 909
AfaI	GTAC	8 cut(s)	348, 665, 858, 932, 1059, 1408, 1430, 1706
AfiI	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1379, 1438, 1460, 1461
AflII	CTTAAG	1 cut(s)	995
AflIII	ACRYGT	2 cut(s)	1054, 1179
AgsI	TTSAA	7 cut(s)	325, 445, 481, 1040, 1199, 1343, 1364
AjiI	CACGTC	1 cut(s)	1055
AjnI	CCWGG	3 cut(s)	117, 547, 1032
AjuI	GAANNNNNNNTTGG	4 cut(s)	129, 161, 1642, 1674
AleI	CACNNNNGTG	2 cut(s)	1758, 1941
AloI	GAACNNNNNNTCC	2 cut(s)	135, 167
Alw21I	GWGCWC	2 cut(s)	44, 258
Alw26I	GTCTC	1 cut(s)	302
AlwI	GGATC	1 cut(s)	1148
AlwNI	CAGNNNCTG	3 cut(s)	615, 1018, 1864
Ama87I	CYCGRG	2 cut(s)	579, 1818
AoxI	GGCC	8 cut(s)	190, 264, 640, 877, 1370, 1606, 1670, 1903
ApaI	GGGCCC	1 cut(s)	1907
ApeKI	GCWGC	5 cut(s)	56, 404, 1012, 1835, 1946
ApoI	RAATTY	2 cut(s)	513, 909
AseI	ATTAAT	2 cut(s)	1047, 1337
AspS9I	GGNCC	7 cut(s)	191, 640, 1370, 1388, 1606, 1903, 1904
AsuHPI	GGTGA	3 cut(s)	382, 449, 794
AvaI	CYCGRG	2 cut(s)	579, 1818
AvaII	GGWCC	1 cut(s)	1388
AxyI	CCTNAGG	1 cut(s)	314
BaeGI	GKGCMC	2 cut(s)	1504, 1907
BaeI	ACNNNNGTAYC	2 cut(s)	444, 477
BalI	TGGCCA	1 cut(s)	879
BanI	GGYRCC	1 cut(s)	1501
BanII	GRGCYC	4 cut(s)	44, 258, 1425, 1907
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
Bbv12I	GWGCWC	2 cut(s)	44, 258
BbvCI	CCTCAGC	1 cut(s)	738
BbvI	GCAGC	5 cut(s)	43, 391, 1024, 1847, 1958
BccI	CCATC	5 cut(s)	53, 917, 1319, 1607, 1904
BceAI	ACGGC	1 cut(s)	1312
BcgI	CGANNNNNNTGC	2 cut(s)	38, 72
BciT130I	CCWGG	3 cut(s)	119, 549, 1034
BclI	TGATCA	1 cut(s)	1678
BcoDI	GTCTC	1 cut(s)	302
BfaI	CTAG	4 cut(s)	812, 1115, 1814, 1972
BfmI	CTRYAG	2 cut(s)	649, 1170
BfrI	CTTAAG	1 cut(s)	995
BfuAI	ACCTGC	3 cut(s)	1283, 1501, 1940
BglII	AGATCT	2 cut(s)	1475, 1685
BisI	GCNGC	6 cut(s)	57, 405, 1001, 1013, 1836, 1947
BlsI	GCNGC	6 cut(s)	58, 406, 1002, 1014, 1837, 1948
BmcAI	AGTACT	1 cut(s)	1706
Bme1390I	CCNGG	3 cut(s)	119, 549, 1034
Bme18I	GGWCC	1 cut(s)	1388
BmeT110I	CYCGRG	2 cut(s)	579, 1818
BmgBI	CACGTC	1 cut(s)	1055
BmgT120I	GGNCC	7 cut(s)	191, 640, 1370, 1388, 1606, 1903, 1904
BmiI	GGNNCC	5 cut(s)	31, 116, 193, 1503, 1905
BmrFI	CCNGG	3 cut(s)	119, 549, 1034
BmrI	ACTGGG	1 cut(s)	1116
BmsI	GCATC	4 cut(s)	574, 1219, 1229, 1705
BmuI	ACTGGG	1 cut(s)	1116
BpmI	CTGGAG	3 cut(s)	38, 101, 1685
Bpu10I	CCTNAGC	1 cut(s)	738
BpuEI	CTTGAG	4 cut(s)	818, 1025, 1409, 1810
BsaAI	YACGTR	1 cut(s)	1182
BsaI	GGTCTC	1 cut(s)	302
BsaJI	CCNNGG	3 cut(s)	72, 1347, 1557
BsaWI	WCCGGW	1 cut(s)	230
Bsc4I	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1379, 1438, 1460, 1461
Bse118I	RCCGGY	1 cut(s)	1718
Bse1I	ACTGG	7 cut(s)	620, 643, 760, 1111, 1240, 1505, 1668
Bse21I	CCTNAGG	1 cut(s)	314
BseBI	CCWGG	3 cut(s)	119, 549, 1034
BseDI	CCNNGG	3 cut(s)	72, 1347, 1557
BseGI	GGATG	2 cut(s)	1244, 1357
BseLI	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1379, 1438, 1460, 1461
BseMII	CTCAG	4 cut(s)	328, 398, 729, 1427
BseNI	ACTGG	7 cut(s)	620, 643, 760, 1111, 1240, 1505, 1668
BseRI	GAGGAG	2 cut(s)	112, 266
BseSI	GKGCMC	2 cut(s)	1504, 1907
BseXI	GCAGC	5 cut(s)	43, 391, 1024, 1847, 1958
BseYI	CCCAGC	1 cut(s)	1496
BsgI	GTGCAG	1 cut(s)	1965
Bsh1236I	CGCG	1 cut(s)	1083
BshFI	GGCC	8 cut(s)	192, 266, 642, 879, 1372, 1608, 1672, 1905
BshNI	GGYRCC	1 cut(s)	1501
BsiHKAI	GWGCWC	2 cut(s)	44, 258
BsiHKCI	CYCGRG	2 cut(s)	579, 1818
BsiSI	CCGG	2 cut(s)	231, 1719
BslI	CCNNNNNNNGG	7 cut(s)	16, 163, 298, 1379, 1438, 1460, 1461
BsmAI	GTCTC	1 cut(s)	302
BsmI	GAATGC	1 cut(s)	543
BsnI	GGCC	8 cut(s)	192, 266, 642, 879, 1372, 1608, 1672, 1905
Bso31I	GGTCTC	1 cut(s)	302
BsoBI	CYCGRG	2 cut(s)	579, 1818
Bsp120I	GGGCCC	1 cut(s)	1903
Bsp1286I	GDGCHC	5 cut(s)	44, 258, 1425, 1504, 1907
Bsp1407I	TGTACA	2 cut(s)	346, 930
Bsp143I	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
BspACI	CCGC	4 cut(s)	154, 368, 1000, 1083
BspANI	GGCC	8 cut(s)	192, 266, 642, 879, 1372, 1608, 1672, 1905
BspCNI	CTCAG	4 cut(s)	327, 397, 730, 1426
BspFNI	CGCG	1 cut(s)	1083
BspLI	GGNNCC	5 cut(s)	31, 116, 193, 1503, 1905
BspMI	ACCTGC	3 cut(s)	1283, 1501, 1940
BspPI	GGATC	1 cut(s)	1148
BspT107I	GGYRCC	1 cut(s)	1501
BspTI	CTTAAG	1 cut(s)	995
BspTNI	GGTCTC	1 cut(s)	302
BsrFI	RCCGGY	1 cut(s)	1718
BsrGI	TGTACA	2 cut(s)	346, 930
BsrI	ACTGG	7 cut(s)	620, 643, 760, 1111, 1240, 1505, 1668
BssAI	RCCGGY	1 cut(s)	1718
BssECI	CCNNGG	3 cut(s)	72, 1347, 1557
BssMI	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
BssNAI	GTATAC	1 cut(s)	753
BssT1I	CCWWGG	1 cut(s)	1347
Bst1107I	GTATAC	1 cut(s)	753
Bst2UI	CCWGG	3 cut(s)	119, 549, 1034
Bst6I	CTCTTC	4 cut(s)	89, 278, 351, 356
BstAFI	CTTAAG	1 cut(s)	995
BstAUI	TGTACA	2 cut(s)	346, 930
BstBAI	YACGTR	1 cut(s)	1182
BstDEI	CTNAG	5 cut(s)	314, 384, 429, 738, 1413
BstF5I	GGATG	2 cut(s)	1244, 1357
BstFNI	CGCG	1 cut(s)	1083
BstKTI	GATC	6 cut(s)	805, 1156, 1478, 1631, 1681, 1688
BstMAI	GTCTC	1 cut(s)	302
BstMBI	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
BstMWI	GCNNNNNNNGC	5 cut(s)	374, 401, 1009, 1133, 1962
BstNI	CCWGG	3 cut(s)	119, 549, 1034
BstNSI	RCATGY	1 cut(s)	715
BstSCI	CCNGG	3 cut(s)	117, 547, 1032
BstSFI	CTRYAG	2 cut(s)	649, 1170
BstSLI	GKGCMC	2 cut(s)	1504, 1907
BstUI	CGCG	1 cut(s)	1083
BstV1I	GCAGC	5 cut(s)	43, 391, 1024, 1847, 1958
BstX2I	RGATCY	2 cut(s)	1475, 1685
BstXI	CCANNNNNNTGG	1 cut(s)	1325
BstYI	RGATCY	2 cut(s)	1475, 1685
BstZ17I	GTATAC	1 cut(s)	753
Bsu36I	CCTNAGG	1 cut(s)	314
BsuRI	GGCC	8 cut(s)	192, 266, 642, 879, 1372, 1608, 1672, 1905
BtrI	CACGTC	1 cut(s)	1055
BtsCI	GGATG	2 cut(s)	1244, 1357
BtsIMutI	CAGTG	7 cut(s)	267, 613, 1016, 1233, 1661, 1787, 1936
BveI	ACCTGC	3 cut(s)	1283, 1501, 1940
CaiI	CAGNNNCTG	3 cut(s)	615, 1018, 1864
Cfr10I	RCCGGY	1 cut(s)	1718
Cfr13I	GGNCC	7 cut(s)	191, 640, 1370, 1388, 1606, 1903, 1904
CseI	GACGC	1 cut(s)	779
CsiI	ACCWGGT	1 cut(s)	1032
Csp6I	GTAC	8 cut(s)	347, 664, 857, 931, 1058, 1407, 1429, 1705
CviAII	CATG	4 cut(s)	712, 881, 1456, 1802
CviQI	GTAC	8 cut(s)	347, 664, 857, 931, 1058, 1407, 1429, 1705
DdeI	CTNAG	5 cut(s)	314, 384, 429, 738, 1413
DpnI	GATC	6 cut(s)	804, 1155, 1477, 1630, 1680, 1687
DpnII	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
EaeI	YGGCCR	1 cut(s)	877
Eam1104I	CTCTTC	4 cut(s)	89, 278, 351, 356
EarI	CTCTTC	4 cut(s)	89, 278, 351, 356
EciI	GGCGGA	1 cut(s)	143
Ecl136II	GAGCTC	2 cut(s)	42, 256
Eco130I	CCWWGG	1 cut(s)	1347
Eco147I	AGGCCT	1 cut(s)	1672
Eco24I	GRGCYC	4 cut(s)	44, 258, 1425, 1907
Eco31I	GGTCTC	1 cut(s)	302
Eco47I	GGWCC	1 cut(s)	1388
Eco53kI	GAGCTC	2 cut(s)	42, 256
Eco81I	CCTNAGG	1 cut(s)	314
Eco88I	CYCGRG	2 cut(s)	579, 1818
EcoICRI	GAGCTC	2 cut(s)	42, 256
EcoO109I	RGGNCCY	3 cut(s)	191, 1606, 1904
EcoRII	CCWGG	3 cut(s)	117, 547, 1032
EcoT14I	CCWWGG	1 cut(s)	1347
EcoT22I	ATGCAT	1 cut(s)	1646
EcoT38I	GRGCYC	4 cut(s)	44, 258, 1425, 1907
ErhI	CCWWGG	1 cut(s)	1347
FaeI	CATG	4 cut(s)	715, 884, 1459, 1805
FatI	CATG	4 cut(s)	711, 880, 1455, 1801
FauI	CCCGC	1 cut(s)	1076
FauNDI	CATATG	1 cut(s)	1870
FbaI	TGATCA	1 cut(s)	1678
FblI	GTMKAC	1 cut(s)	752
Fnu4HI	GCNGC	6 cut(s)	57, 405, 1001, 1013, 1836, 1947
FokI	GGATG	2 cut(s)	1251, 1364
FriOI	GRGCYC	4 cut(s)	44, 258, 1425, 1907
Fsp4HI	GCNGC	6 cut(s)	57, 405, 1001, 1013, 1836, 1947
FspBI	CTAG	4 cut(s)	812, 1115, 1814, 1972
GluI	GCNGC	6 cut(s)	57, 405, 1001, 1013, 1836, 1947
GsaI	CCCAGC	1 cut(s)	1500
GsuI	CTGGAG	3 cut(s)	38, 101, 1685
HaeIII	GGCC	8 cut(s)	192, 266, 642, 879, 1372, 1608, 1672, 1905
HapII	CCGG	2 cut(s)	231, 1719
HgaI	GACGC	1 cut(s)	779
Hin1II	CATG	4 cut(s)	715, 884, 1459, 1805
HincII	GTYRAC	2 cut(s)	1023, 1402
HindII	GTYRAC	2 cut(s)	1023, 1402
HindIII	AAGCTT	2 cut(s)	393, 1217
HinfI	GANTC	4 cut(s)	102, 245, 272, 1265
HpaI	GTTAAC	1 cut(s)	1023
HpaII	CCGG	2 cut(s)	231, 1719
HphI	GGTGA	3 cut(s)	382, 449, 794
Hpy166II	GTNNAC	8 cut(s)	753, 767, 1023, 1058, 1318, 1388, 1402, 1796
Hpy188III	TCNNGA	7 cut(s)	399, 800, 812, 835, 969, 1115, 1789
Hpy8I	GTNNAC	8 cut(s)	753, 767, 1023, 1058, 1318, 1388, 1402, 1796
Hpy99I	CGWCG	1 cut(s)	53
HpyAV	CCTTC	8 cut(s)	427, 439, 475, 534, 952, 1401, 1597, 1909
HpyCH4IV	ACGT	5 cut(s)	51, 817, 1054, 1181, 1212
HpyF10VI	GCNNNNNNNGC	5 cut(s)	374, 401, 1009, 1133, 1962
HpyF3I	CTNAG	5 cut(s)	314, 384, 429, 738, 1413
HpySE526I	ACGT	5 cut(s)	51, 817, 1054, 1181, 1212
Hsp92II	CATG	4 cut(s)	715, 884, 1459, 1805
Ksp22I	TGATCA	1 cut(s)	1678
KspAI	GTTAAC	1 cut(s)	1023
Kzo9I	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
LmnI	GCTCC	6 cut(s)	47, 120, 253, 261, 1171, 1861
Lsp1109I	GCAGC	5 cut(s)	43, 391, 1024, 1847, 1958
LweI	GCATC	4 cut(s)	574, 1219, 1229, 1705
MabI	ACCWGGT	1 cut(s)	1032
MaeI	CTAG	4 cut(s)	812, 1115, 1814, 1972
MaeII	ACGT	5 cut(s)	51, 817, 1054, 1181, 1212
MaeIII	GTNAC	3 cut(s)	287, 896, 1175
MalI	GATC	6 cut(s)	804, 1155, 1477, 1630, 1680, 1687
MboI	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
MboII	GAAGA	9 cut(s)	103, 106, 295, 368, 373, 400, 731, 1553, 1936
MfeI	CAATTG	1 cut(s)	1243
MflI	RGATCY	2 cut(s)	1475, 1685
MhlI	GDGCHC	5 cut(s)	44, 258, 1425, 1504, 1907
MlsI	TGGCCA	1 cut(s)	879
MluNI	TGGCCA	1 cut(s)	879
MlyI	GAGTC	3 cut(s)	111, 239, 266
Mox20I	TGGCCA	1 cut(s)	879
Mph1103I	ATGCAT	1 cut(s)	1646
MscI	TGGCCA	1 cut(s)	879
MseI	TTAA	8 cut(s)	488, 984, 996, 1022, 1047, 1293, 1337, 1656
MslI	CAYNNNNRTG	3 cut(s)	1323, 1758, 1941
Msp20I	TGGCCA	1 cut(s)	879
MspCI	CTTAAG	1 cut(s)	995
MspI	CCGG	2 cut(s)	231, 1719
MspR9I	CCNGG	3 cut(s)	119, 549, 1034
MunI	CAATTG	1 cut(s)	1243
Mva1269I	GAATGC	1 cut(s)	543
MvaI	CCWGG	3 cut(s)	119, 549, 1034
MvnI	CGCG	1 cut(s)	1083
MwoI	GCNNNNNNNGC	5 cut(s)	374, 401, 1009, 1133, 1962
NdeI	CATATG	1 cut(s)	1870
NdeII	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
NlaIII	CATG	4 cut(s)	715, 884, 1459, 1805
NlaIV	GGNNCC	5 cut(s)	31, 116, 193, 1503, 1905
NmeAIII	GCCGAG	1 cut(s)	91
NmuCI	GTSAC	1 cut(s)	287
NsiI	ATGCAT	1 cut(s)	1646
NspI	RCATGY	1 cut(s)	715
OliI	CACNNNNGTG	2 cut(s)	1758, 1941
PaeR7I	CTCGAG	1 cut(s)	1818
PceI	AGGCCT	1 cut(s)	1672
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PctI	GAATGC	1 cut(s)	543
PfeI	GAWTC	1 cut(s)	1265
PflMI	CCANNNNNTGG	3 cut(s)	16, 163, 1379
PkrI	GCNGC	6 cut(s)	58, 406, 1002, 1014, 1837, 1948
PleI	GAGTC	3 cut(s)	110, 239, 266
PpsI	GAGTC	3 cut(s)	110, 239, 266
Ppu21I	YACGTR	1 cut(s)	1182
PshBI	ATTAAT	2 cut(s)	1047, 1337
PsiI	TTATAA	1 cut(s)	1748
Psp124BI	GAGCTC	2 cut(s)	44, 258
Psp6I	CCWGG	3 cut(s)	117, 547, 1032
PspFI	CCCAGC	1 cut(s)	1496
PspGI	CCWGG	3 cut(s)	117, 547, 1032
PspN4I	GGNNCC	5 cut(s)	31, 116, 193, 1503, 1905
PspOMI	GGGCCC	1 cut(s)	1903
PspPI	GGNCC	7 cut(s)	191, 640, 1370, 1388, 1606, 1903, 1904
PspXI	VCTCGAGB	1 cut(s)	1818
PsrI	GAACNNNNNNTAC	2 cut(s)	840, 872
PstNI	CAGNNNCTG	3 cut(s)	615, 1018, 1864
PsuI	RGATCY	2 cut(s)	1475, 1685
RsaI	GTAC	8 cut(s)	348, 665, 858, 932, 1059, 1408, 1430, 1706
RsaNI	GTAC	8 cut(s)	347, 664, 857, 931, 1058, 1407, 1429, 1705
RseI	CAYNNNNRTG	3 cut(s)	1323, 1758, 1941
SacI	GAGCTC	2 cut(s)	44, 258
SaqAI	TTAA	8 cut(s)	488, 984, 996, 1022, 1047, 1293, 1337, 1656
SatI	GCNGC	6 cut(s)	57, 405, 1001, 1013, 1836, 1947
Sau3AI	GATC	6 cut(s)	802, 1153, 1475, 1628, 1678, 1685
Sau96I	GGNCC	7 cut(s)	191, 640, 1370, 1388, 1606, 1903, 1904
ScaI	AGTACT	1 cut(s)	1706
SchI	GAGTC	3 cut(s)	111, 239, 266
ScrFI	CCNGG	3 cut(s)	119, 549, 1034
SduI	GDGCHC	5 cut(s)	44, 258, 1425, 1504, 1907
SexAI	ACCWGGT	1 cut(s)	1032
SfaNI	GCATC	4 cut(s)	574, 1219, 1229, 1705
SfcI	CTRYAG	2 cut(s)	649, 1170
Sfr274I	CTCGAG	1 cut(s)	1818
SinI	GGWCC	1 cut(s)	1388
SlaI	CTCGAG	1 cut(s)	1818
SmiMI	CAYNNNNRTG	3 cut(s)	1323, 1758, 1941
SmlI	CTYRAG	6 cut(s)	833, 995, 1004, 1424, 1789, 1818
SmoI	CTYRAG	6 cut(s)	833, 995, 1004, 1424, 1789, 1818
SseBI	AGGCCT	1 cut(s)	1672
SsiI	CCGC	4 cut(s)	154, 368, 1000, 1083
SspI	AATATT	1 cut(s)	1735
SspMI	CTAG	4 cut(s)	812, 1115, 1814, 1972
SstI	GAGCTC	2 cut(s)	44, 258
StuI	AGGCCT	1 cut(s)	1672
StyD4I	CCNGG	3 cut(s)	117, 547, 1032
StyI	CCWWGG	1 cut(s)	1347
TaiI	ACGT	5 cut(s)	54, 820, 1057, 1184, 1215
TaqI	TCGA	5 cut(s)	48, 174, 799, 1149, 1819
TatI	WGTACW	4 cut(s)	346, 663, 930, 1704
TauI	GCSGC	1 cut(s)	1003
TfiI	GAWTC	1 cut(s)	1265
Tru1I	TTAA	8 cut(s)	488, 984, 996, 1022, 1047, 1293, 1337, 1656
Tru9I	TTAA	8 cut(s)	488, 984, 996, 1022, 1047, 1293, 1337, 1656
TscAI	CASTG	7 cut(s)	274, 620, 1023, 1240, 1668, 1787, 1943
TseFI	GTSAC	1 cut(s)	287
TseI	GCWGC	5 cut(s)	56, 404, 1012, 1835, 1946
Tsp45I	GTSAC	1 cut(s)	287
TspDTI	ATGAA	4 cut(s)	512, 732, 1472, 1616
TspGWI	ACGGA	2 cut(s)	22, 1299
TspRI	CASTG	7 cut(s)	274, 620, 1023, 1240, 1668, 1787, 1943
Van91I	CCANNNNNTGG	3 cut(s)	16, 163, 1379
Vha464I	CTTAAG	1 cut(s)	995
VpaK11BI	GGWCC	1 cut(s)	1388
VspI	ATTAAT	2 cut(s)	1047, 1337
XapI	RAATTY	2 cut(s)	513, 909
XbaI	TCTAGA	2 cut(s)	811, 1114
XceI	RCATGY	1 cut(s)	715
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1325
XhoI	CTCGAG	1 cut(s)	1818
XmiI	GTMKAC	1 cut(s)	752
XspI	CTAG	4 cut(s)	812, 1115, 1814, 1972
ZrmI	AGTACT	1 cut(s)	1706
Zsp2I	ATGCAT	1 cut(s)	1646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.