Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001110

Physical Location & Seq

Genomic Coordinates Forward (+)

453801 .. 461485

Gene Structure 7685 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1006800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGTGCGACTTGATCCTCCTGATAAACCCTAGAATCTCAAGTTTCTCTAAAATCACTCTCTCGCTTCTGCAGATAACTTCGAGTGAGTGGAAAATGGTGGTGAAATCGCTGGTTCAGAGCTCCGCCGATGCTGAAGGAGGCGCTGACGCTGCAGACCCGCATTCCAAAAGCGACATTCCCTCGCCGCCGGGAAGGAGAACTAGTTCTCGCCTTCGGGGCAAAGAGAAACCCCAGAAGGAAATCCTGGTCCGCAAAAGAGTTGCATTACTTGATGAGCACAGAGACGGAGACGGAGACCGAGAGCAAGACGGAGGGGGAGACGGAGGTAGCCTCAGCAAAAGAGCCAATGTCGACGGTGGAAAAAGCTCCCATGCTAAAAATGAGGCCGGGGACGCCGGCTCTAACGGTTGTTTAGAAGGCGGAGCCAGCAAACCCACTGATTCTTCGGCTGAGAAAAGCGACCATGCTAAGGTCAAGGAGACCCTGAGGCTGTTCAACAAGCATTACCTTTATTTCGTACAGGAAGAAGAAATGAGGTGCAGAAAAGTGGAGGCTGATAAGAAGGCCTCCAAATCCGCAAAGAAGGGCTCGAAATCTTCAAAAAAATCTAAGAAAGAGGCTTCCCCGCTAGAGGCAAAGGCGTCAAAACGACATGATTTGAAGGCAATATCGAAGATGATGGAGAGAAAAGAAATCTTGAATGCCCCTAAAAGAATCGGAAGCATTCCAGGTATTGATGTTGGGCATCAGTTCTATTCTCGGGCTGAAATGGTTGCTGTTGGTTTTCACAGCCACTGGCTCAACGGCATTGACTTTATGGGGCAAAACTACGGCAAAGTCAAAGGGGAGTACAGTAGCTATACATTCCCACTTGCAGTGGCCATTGTTATATCTGGCATGTATGAGGATGATTTGGATAACGCAGAGGATGTTGTGTATACTGGCCAAGGTGGTCATAATTTGTCAGGTGATAAGCGTCAAATTCGAGACCAAGTTCTAGAACGTGGTAATTTGGCACTCAAGAATTGCGTGGAGCAATGTGTACCTGTTAGAGTAGTTCGTGGCCATGAATGTAAAAGTAGTTATGTTGGAAAACTTTACACGTATGATGGTTTGTACAAGGTTGTTCAGTATTGGGCGGAGAAGGGTATTTCTGGATTTACTGTTTTTAAGTATCGTCTTAGGCGTATGGAAGGGCAACCAGTTTTGACCACTAACCAGGTTCAATTCATCACTCGACGTGTACCACAGTCTGTTGCAGAAATACGCGGATTGGCGTGCGAAGACATCAGTGGGGGCCAAGAGGATGTTCCCATTCCGGCTACCAATTTGGTTGATGATCCACCTGTTTCACCCACAGGTTTTACGTATTGTAAGTCTATCCAAGTTGCGCAAAATGTGAAGCTTCCCACAGATGTCACTGGATGCAATTGCAAAGGTTCTTGCACGGACCCTAAGACTTGTGCATGCACCATGCTAAATGGCGATGACTTCCCATATGTGCGGCGTGATGGTGGCAGATTAATTGAGGCGAAGGATGTAGTGTTTGAATGTGGTCCAAAATGTGGTTGTGGACTTTCTTGCCTCAATCGTACTTCTCAGAGAGGGCTGAAGTATCGGTTCGAGGTTTTCCGGACACCAATGAGAGGATGGGCTGTTAGATCATGGGATTTTATCCCTTCTGGAGCACCAGTCTGTGAGTACATAGGAGTAATTAGAAGGACAGAAGATGTAGATAGTGCCTTAGAGAACTATTACATATTTGACATGGATTGTTTGCAAACTATGAAGGGGCTTGACGGAAGAGAGAGGCGTTCACAAGCTGTATCCATACCAGCAGCTAATTCACTGGAGAGACCTGATGATCAGAGCTCTGATAGCGGGCCAGAGTTCTGCATTGATGCAGGTTCAACTGGAAACATAGCCAGATTTATAAATCACAGTTGTGAGCCTAATCTGTTTGTCCAGTCGGTGTTGAGCTCACACCATGACTTAAAACTAGCTCGGGTGATGCTGTTTGCTGCGGACAACATACCTCCTCTGCAGGAGCTCACATACGACTATGGCTATGCCCTTGATAGCGTCTTGGGTCCCGATGGGAAAGTAAAAAAGATGTTCTGCCATTGTGGTGCGACAGGTTGCAGGAAGCGCTTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000775 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008327 GO:0008757 GO:0009987 GO:0010216 GO:0010385 GO:0010428 GO:0010429 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0034641 GO:0034968 GO:0036094 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0046974 GO:0051276 GO:0051567 GO:0061647 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0140096 GO:1901265 GO:1901360 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

720

Amino Acids

79.2

Weight (kDa)

8.56

Isoelectric Point (pI)

44.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	238 - 400	3.7e-51	SAD/SRA domain
Pre-SET	PF05033	432 - 531	6.6e-18	Pre-SET motif
SET	PF00856	550 - 689	2.1e-18	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13960 AT5G13960
fragaria_vesca	FvH4_3g12630 FvH4_4g12820 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_4g22710 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300 FvH4_6g54300
malus_domestica	MD09G1002600.v1.1 MD13G1130100.v1.1 MD16G1130300.v1.1 MD17G1006800.v1.1
prunus_persica	Prupe.1G216000_v2.0.a1 Prupe.1G216000_v2.0.a1 Prupe.3G313600_v2.0.a1
pyrus_communis	pycom111g00200 pycom111g00210 pycom13g11320 pycom17g00240
rosa_chinensis	RchiOBHm_Chr2g0176511 RchiOBHm_Chr4g0412311 RchiOBHm_Chr4g0428931
rosa_laevigata	RLG00000007113 RLG00000008308 RLG00000022419
rosa_multiflora	Rmu_co8243205.1_g000001 Rmu_co8447061.1_g000001 Rmu_sc0007311.1_g000001 Rmu_sc0010364.1_g000006 Rmu_sc0011904.1_g000010 Rmu_sc0023962.1_g000001 Rmu_sc0025254.1_g000001 Rmu_sc0026969.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076350 Rroxscaffold_5G00370600
rosa_rugosa	Rorug02G0595300 Rorug02G0595400 Rorug04G0105100 Rorug04G0230700 Rorug04G0230800
rosa_samantha	Rh2AG673600 Rh2BG684800 Rh2CG647600 Rh2DG698500 Rh4AG172200 Rh4AG287100 Rh4BG171400 Rh4BG292900 Rh4CG183000 Rh4CG309000 Rh4DG166600 Rh4DG290200
rosa_wichuraiana	Rw2G055250 Rw4G014370 Rw4G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1934
Acc16I	TGCGCA	1 cut(s)	1392
Acc36I	ACCTGC	1 cut(s)	1895
AccB7I	CCANNNNNTGG	1 cut(s)	1565
AccI	GTMKAC	2 cut(s)	351, 938
AccII	CGCG	1 cut(s)	1269
AccIII	TCCGGA	1 cut(s)	1632
AclWI	GGATC	2 cut(s)	7, 1334
AcoI	YGGCCR	3 cut(s)	879, 943, 1063
AcsI	RAATTY	1 cut(s)	981
AcuI	CTGAAG	2 cut(s)	153, 1631
AcyI	GRCGYC	2 cut(s)	393, 641
AfaI	GTAC	7 cut(s)	519, 851, 1044, 1118, 1245, 1594, 1703
AfeI	AGCGCT	1 cut(s)	2150
AfiI	CCNNNNNNNGG	4 cut(s)	469, 631, 1565, 1646
AflIII	ACRYGT	2 cut(s)	1101, 1240
AgsI	TTSAA	7 cut(s)	496, 600, 661, 700, 1226, 1550, 1911
AhlI	ACTAGT	1 cut(s)	200
AjiI	CACGTC	1 cut(s)	1241
AjnI	CCWGG	3 cut(s)	243, 727, 1218
AjuI	GAANNNNNNNTTGG	2 cut(s)	1293, 1325
AleI	CACNNNNGTG	1 cut(s)	1944
AloI	GAACNNNNNNTCC	2 cut(s)	187, 219
Alw21I	GWGCWC	6 cut(s)	122, 279, 1690, 1874, 1982, 2052
Alw26I	GTCTC	7 cut(s)	276, 282, 288, 312, 473, 981, 1849
AlwI	GGATC	2 cut(s)	7, 1334
AlwNI	CAGNNNCTG	1 cut(s)	795
Ama87I	CYCGRG	2 cut(s)	759, 2004
Aor13HI	TCCGGA	1 cut(s)	1632
Aor51HI	AGCGCT	1 cut(s)	2150
AoxI	GGCC	7 cut(s)	384, 564, 879, 943, 1063, 1297, 1883
ApeKI	GCWGC	3 cut(s)	149, 1838, 2021
ApoI	RAATTY	1 cut(s)	981
AseI	ATTAAT	1 cut(s)	1523
Asp700I	GAANNNNTTC	1 cut(s)	202
AspLEI	GCGC	3 cut(s)	143, 1393, 2151
AspS9I	GGNCC	6 cut(s)	247, 1297, 1450, 1556, 1883, 2090
AsuC2I	CCSGG	2 cut(s)	189, 388
AsuHPI	GGTGA	4 cut(s)	112, 980, 1344, 2020
AvaI	CYCGRG	2 cut(s)	759, 2004
AvaII	GGWCC	4 cut(s)	247, 1450, 1556, 2090
AxyI	CCTNAGG	1 cut(s)	485
BalI	TGGCCA	3 cut(s)	881, 945, 1065
BanII	GRGCYC	5 cut(s)	122, 590, 1874, 1982, 2052
BbsI	GAAGAC	1 cut(s)	1290
Bbv12I	GWGCWC	6 cut(s)	122, 279, 1690, 1874, 1982, 2052
BbvCI	CCTCAGC	1 cut(s)	332
BbvI	GCAGC	3 cut(s)	136, 1850, 2008
BccI	CCATC	5 cut(s)	673, 1103, 1505, 1644, 2090
BceAI	ACGGC	2 cut(s)	820, 847
BciT130I	CCWGG	3 cut(s)	245, 729, 1220
BciVI	GTATCC	1 cut(s)	1837
BclI	TGATCA	1 cut(s)	1864
BcnI	CCSGG	2 cut(s)	189, 388
BcoDI	GTCTC	7 cut(s)	276, 282, 288, 312, 473, 981, 1849
BcuI	ACTAGT	1 cut(s)	200
BfaI	CTAG	6 cut(s)	30, 201, 629, 998, 2000, 2158
BfmI	CTRYAG	3 cut(s)	68, 150, 2042
BfoI	RGCGCY	2 cut(s)	144, 2152
BfuAI	ACCTGC	1 cut(s)	1895
BfuI	GTATCC	1 cut(s)	1837
BglI	GCCNNNNNGGC	1 cut(s)	216
BisI	GCNGC	5 cut(s)	150, 185, 1505, 1839, 2022
BlsI	GCNGC	5 cut(s)	151, 186, 1506, 1840, 2023
Bme1390I	CCNGG	5 cut(s)	189, 245, 388, 729, 1220
Bme18I	GGWCC	4 cut(s)	247, 1450, 1556, 2090
BmeT110I	CYCGRG	2 cut(s)	759, 2004
BmgBI	CACGTC	1 cut(s)	1241
BmgT120I	GGNCC	6 cut(s)	247, 1297, 1450, 1556, 1883, 2090
BmiI	GGNNCC	5 cut(s)	424, 1298, 1452, 2091, 2092
BmrFI	CCNGG	5 cut(s)	189, 245, 388, 729, 1220
BmsI	GCATC	5 cut(s)	118, 754, 1415, 1891, 2001
BpiI	GAAGAC	1 cut(s)	1290
BplI	GAGNNNNNCTC	2 cut(s)	315, 347
BpmI	CTGGAG	2 cut(s)	1704, 1871
Bpu10I	CCTNAGC	2 cut(s)	332, 468
BpuEI	CTTGAG	2 cut(s)	22, 1004
BpuMI	CCSGG	2 cut(s)	189, 388
BsaAI	YACGTR	2 cut(s)	1104, 1368
BsaHI	GRCGYC	2 cut(s)	393, 641
BsaI	GGTCTC	4 cut(s)	288, 473, 981, 1849
BsaJI	CCNNGG	2 cut(s)	387, 946
BsaWI	WCCGGW	1 cut(s)	1632
BsaXI	ACNNNNNCTCC	4 cut(s)	187, 217, 1677, 1707
Bsc4I	CCNNNNNNNGG	4 cut(s)	469, 631, 1565, 1646
Bse118I	RCCGGY	1 cut(s)	395
Bse1I	ACTGG	8 cut(s)	800, 946, 1202, 1426, 1691, 1854, 1918, 1966
Bse21I	CCTNAGG	1 cut(s)	485
Bse3DI	GCAATG	1 cut(s)	1043
BseAI	TCCGGA	1 cut(s)	1632
BseBI	CCWGG	3 cut(s)	245, 729, 1220
BseDI	CCNNGG	2 cut(s)	387, 946
BseGI	GGATG	6 cut(s)	913, 934, 1312, 1430, 1543, 1655
BseLI	CCNNNNNNNGG	4 cut(s)	469, 631, 1565, 1646
BseMI	GCAATG	1 cut(s)	1043
BseMII	CTCAG	4 cut(s)	346, 441, 476, 1613
BseNI	ACTGG	8 cut(s)	800, 946, 1202, 1426, 1691, 1854, 1918, 1966
BseRI	GAGGAG	1 cut(s)	2028
BseXI	GCAGC	3 cut(s)	136, 1850, 2008
BsgI	GTGCAG	1 cut(s)	559
Bsh1236I	CGCG	1 cut(s)	1269
BshFI	GGCC	7 cut(s)	386, 566, 881, 945, 1065, 1299, 1885
BsiHKAI	GWGCWC	6 cut(s)	122, 279, 1690, 1874, 1982, 2052
BsiHKCI	CYCGRG	2 cut(s)	759, 2004
BsiSI	CCGG	5 cut(s)	188, 387, 396, 1319, 1633
BslFI	GGGAC	2 cut(s)	404, 2076
BslI	CCNNNNNNNGG	4 cut(s)	469, 631, 1565, 1646
BsmAI	GTCTC	7 cut(s)	276, 282, 288, 312, 473, 981, 1849
BsmBI	CGTCTC	3 cut(s)	276, 282, 312
BsmFI	GGGAC	2 cut(s)	404, 2076
BsmI	GAATGC	3 cut(s)	160, 706, 723
BsnI	GGCC	7 cut(s)	386, 566, 881, 945, 1065, 1299, 1885
Bso31I	GGTCTC	4 cut(s)	288, 473, 981, 1849
BsoBI	CYCGRG	2 cut(s)	759, 2004
Bsp1286I	GDGCHC	7 cut(s)	122, 279, 590, 1690, 1874, 1982, 2052
Bsp13I	TCCGGA	1 cut(s)	1632
Bsp1407I	TGTACA	1 cut(s)	1116
Bsp143I	GATC	4 cut(s)	12, 1339, 1661, 1864
BspANI	GGCC	7 cut(s)	386, 566, 881, 945, 1065, 1299, 1885
BspCNI	CTCAG	4 cut(s)	345, 442, 477, 1612
BspEI	TCCGGA	1 cut(s)	1632
BspFNI	CGCG	1 cut(s)	1269
BspLI	GGNNCC	5 cut(s)	424, 1298, 1452, 2091, 2092
BspMAI	CTGCAG	3 cut(s)	72, 154, 2046
BspMI	ACCTGC	1 cut(s)	1895
BspPI	GGATC	2 cut(s)	7, 1334
BspTNI	GGTCTC	4 cut(s)	288, 473, 981, 1849
BsrDI	GCAATG	1 cut(s)	1043
BsrFI	RCCGGY	1 cut(s)	395
BsrGI	TGTACA	1 cut(s)	1116
BsrI	ACTGG	8 cut(s)	800, 946, 1202, 1426, 1691, 1854, 1918, 1966
BssAI	RCCGGY	1 cut(s)	395
BssECI	CCNNGG	2 cut(s)	387, 946
BssMI	GATC	4 cut(s)	12, 1339, 1661, 1864
BssNAI	GTATAC	1 cut(s)	939
BssNI	GRCGYC	2 cut(s)	393, 641
BssT1I	CCWWGG	1 cut(s)	946
Bst1107I	GTATAC	1 cut(s)	939
Bst2UI	CCWGG	3 cut(s)	245, 729, 1220
Bst4CI	ACNGT	6 cut(s)	356, 407, 854, 1165, 1251, 1943
Bst6I	CTCTTC	1 cut(s)	1798
BstACI	GRCGYC	2 cut(s)	393, 641
BstAUI	TGTACA	1 cut(s)	1116
BstBAI	YACGTR	2 cut(s)	1104, 1368
BstC8I	GCNNGC	5 cut(s)	397, 427, 1279, 1468, 1883
BstDEI	CTNAG	9 cut(s)	332, 450, 468, 485, 609, 1181, 1455, 1599, 1744
BstF5I	GGATG	6 cut(s)	913, 934, 1312, 1430, 1543, 1655
BstFNI	CGCG	1 cut(s)	1269
BstH2I	RGCGCY	2 cut(s)	144, 2152
BstHHI	GCGC	3 cut(s)	143, 1393, 2151
BstKTI	GATC	4 cut(s)	15, 1342, 1664, 1867
BstMAI	GTCTC	7 cut(s)	276, 282, 288, 312, 473, 981, 1849
BstMBI	GATC	4 cut(s)	12, 1339, 1661, 1864
BstMWI	GCNNNNNNNGC	6 cut(s)	149, 216, 392, 426, 1878, 2148
BstNI	CCWGG	3 cut(s)	245, 729, 1220
BstNSI	RCATGY	2 cut(s)	901, 1470
BstSCI	CCNGG	5 cut(s)	187, 243, 386, 727, 1218
BstSFI	CTRYAG	3 cut(s)	68, 150, 2042
BstSNI	TACGTA	1 cut(s)	1368
BstUI	CGCG	1 cut(s)	1269
BstV1I	GCAGC	3 cut(s)	136, 1850, 2008
BstV2I	GAAGAC	1 cut(s)	1290
BstZ17I	GTATAC	1 cut(s)	939
Bsu36I	CCTNAGG	1 cut(s)	485
BsuI	GTATCC	1 cut(s)	1837
BsuRI	GGCC	7 cut(s)	386, 566, 881, 945, 1065, 1299, 1885
BtgZI	GCGATG	1 cut(s)	1500
BtrI	CACGTC	1 cut(s)	1241
BtsCI	GGATG	6 cut(s)	913, 934, 1312, 1430, 1543, 1655
BtsI	GCAGTG	1 cut(s)	882
BtsIMutI	CAGTG	6 cut(s)	435, 793, 882, 1297, 1419, 1847
BveI	ACCTGC	1 cut(s)	1895
Cac8I	GCNNGC	5 cut(s)	397, 427, 1279, 1468, 1883
CaiI	CAGNNNCTG	1 cut(s)	795
CfoI	GCGC	3 cut(s)	143, 1393, 2151
Cfr10I	RCCGGY	1 cut(s)	395
Cfr13I	GGNCC	6 cut(s)	247, 1297, 1450, 1556, 1883, 2090
CseI	GACGC	5 cut(s)	155, 401, 630, 965, 2071
CsiI	ACCWGGT	1 cut(s)	1218
Csp6I	GTAC	7 cut(s)	518, 850, 1043, 1117, 1244, 1593, 1702
CviQI	GTAC	7 cut(s)	518, 850, 1043, 1117, 1244, 1593, 1702
DdeI	CTNAG	9 cut(s)	332, 450, 468, 485, 609, 1181, 1455, 1599, 1744
DpnI	GATC	4 cut(s)	14, 1341, 1663, 1866
DpnII	GATC	4 cut(s)	12, 1339, 1661, 1864
EaeI	YGGCCR	3 cut(s)	879, 943, 1063
Eam1104I	CTCTTC	1 cut(s)	1798
EarI	CTCTTC	1 cut(s)	1798
EciI	GGCGGA	3 cut(s)	112, 435, 1154
Ecl136II	GAGCTC	4 cut(s)	120, 1872, 1980, 2050
Eco105I	TACGTA	1 cut(s)	1368
Eco130I	CCWWGG	1 cut(s)	946
Eco147I	AGGCCT	1 cut(s)	566
Eco24I	GRGCYC	5 cut(s)	122, 590, 1874, 1982, 2052
Eco31I	GGTCTC	4 cut(s)	288, 473, 981, 1849
Eco47I	GGWCC	4 cut(s)	247, 1450, 1556, 2090
Eco47III	AGCGCT	1 cut(s)	2150
Eco53kI	GAGCTC	4 cut(s)	120, 1872, 1980, 2050
Eco57I	CTGAAG	2 cut(s)	153, 1631
Eco81I	CCTNAGG	1 cut(s)	485
Eco88I	CYCGRG	2 cut(s)	759, 2004
EcoICRI	GAGCTC	4 cut(s)	120, 1872, 1980, 2050
EcoO109I	RGGNCCY	1 cut(s)	2090
EcoRII	CCWGG	3 cut(s)	243, 727, 1218
EcoT14I	CCWWGG	1 cut(s)	946
EcoT38I	GRGCYC	5 cut(s)	122, 590, 1874, 1982, 2052
ErhI	CCWWGG	1 cut(s)	946
Esp3I	CGTCTC	3 cut(s)	276, 282, 312
FaqI	GGGAC	2 cut(s)	404, 2076
FauI	CCCGC	3 cut(s)	165, 633, 1874
FauNDI	CATATG	1 cut(s)	1498
FbaI	TGATCA	1 cut(s)	1864
FblI	GTMKAC	2 cut(s)	351, 938
Fnu4HI	GCNGC	5 cut(s)	150, 185, 1505, 1839, 2022
FokI	GGATG	6 cut(s)	920, 941, 1319, 1437, 1550, 1662
FriOI	GRGCYC	5 cut(s)	122, 590, 1874, 1982, 2052
Fsp4HI	GCNGC	5 cut(s)	150, 185, 1505, 1839, 2022
FspBI	CTAG	6 cut(s)	30, 201, 629, 998, 2000, 2158
FspI	TGCGCA	1 cut(s)	1392
GlaI	GCGC	3 cut(s)	142, 1392, 2150
GluI	GCNGC	5 cut(s)	150, 185, 1505, 1839, 2022
GsuI	CTGGAG	2 cut(s)	1704, 1871
HaeII	RGCGCY	2 cut(s)	144, 2152
HaeIII	GGCC	7 cut(s)	386, 566, 881, 945, 1065, 1299, 1885
HapII	CCGG	5 cut(s)	188, 387, 396, 1319, 1633
HgaI	GACGC	5 cut(s)	155, 401, 630, 965, 2071
HhaI	GCGC	3 cut(s)	143, 1393, 2151
Hin1I	GRCGYC	2 cut(s)	393, 641
Hin6I	GCGC	3 cut(s)	141, 1391, 2149
HinP1I	GCGC	3 cut(s)	141, 1391, 2149
HincII	GTYRAC	1 cut(s)	352
HindII	GTYRAC	1 cut(s)	352
HindIII	AAGCTT	1 cut(s)	1403
HinfI	GANTC	3 cut(s)	33, 440, 714
HpaII	CCGG	5 cut(s)	188, 387, 396, 1319, 1633
HphI	GGTGA	4 cut(s)	112, 980, 1344, 2020
Hpy166II	GTNNAC	6 cut(s)	352, 939, 1043, 1244, 1574, 1817
Hpy188I	TCNGA	5 cut(s)	117, 719, 1602, 1869, 1876
Hpy188III	TCNNGA	9 cut(s)	19, 697, 986, 998, 1021, 1155, 1633, 1683, 2093
Hpy8I	GTNNAC	6 cut(s)	352, 939, 1043, 1244, 1574, 1817
Hpy99I	CGWCG	2 cut(s)	356, 1242
HpyCH4III	ACNGT	6 cut(s)	356, 407, 854, 1165, 1251, 1943
HpyCH4IV	ACGT	4 cut(s)	1003, 1103, 1240, 1367
HpyF10VI	GCNNNNNNNGC	6 cut(s)	149, 216, 392, 426, 1878, 2148
HpyF3I	CTNAG	9 cut(s)	332, 450, 468, 485, 609, 1181, 1455, 1599, 1744
HpySE526I	ACGT	4 cut(s)	1003, 1103, 1240, 1367
Hsp92I	GRCGYC	2 cut(s)	393, 641
HspAI	GCGC	3 cut(s)	141, 1391, 2149
KflI	GGGWCCC	1 cut(s)	2090
Kpn2I	TCCGGA	1 cut(s)	1632
KroI	GCCGGC	1 cut(s)	395
KroNI	GCCGGC	1 cut(s)	397
Ksp22I	TGATCA	1 cut(s)	1864
Kzo9I	GATC	4 cut(s)	12, 1339, 1661, 1864
LmnI	GCTCC	6 cut(s)	125, 371, 422, 1033, 1685, 2047
Lsp1109I	GCAGC	3 cut(s)	136, 1850, 2008
LweI	GCATC	5 cut(s)	118, 754, 1415, 1891, 2001
MabI	ACCWGGT	1 cut(s)	1218
MaeI	CTAG	6 cut(s)	30, 201, 629, 998, 2000, 2158
MaeII	ACGT	4 cut(s)	1003, 1103, 1240, 1367
MaeIII	GTNAC	1 cut(s)	1417
MalI	GATC	4 cut(s)	14, 1341, 1663, 1866
MboI	GATC	4 cut(s)	12, 1339, 1661, 1864
MboII	GAAGA	8 cut(s)	435, 536, 539, 588, 685, 1295, 1739, 1815
MfeI	CAATTG	1 cut(s)	1429
MhlI	GDGCHC	7 cut(s)	122, 279, 590, 1690, 1874, 1982, 2052
MlsI	TGGCCA	3 cut(s)	881, 945, 1065
MluNI	TGGCCA	3 cut(s)	881, 945, 1065
MmeI	TCCRAC	1 cut(s)	1069
Mox20I	TGGCCA	3 cut(s)	881, 945, 1065
MroI	TCCGGA	1 cut(s)	1632
MroNI	GCCGGC	1 cut(s)	395
MroXI	GAANNNNTTC	1 cut(s)	202
MscI	TGGCCA	3 cut(s)	881, 945, 1065
MseI	TTAA	3 cut(s)	1170, 1523, 1994
MslI	CAYNNNNRTG	2 cut(s)	1944, 2127
Msp20I	TGGCCA	3 cut(s)	881, 945, 1065
MspI	CCGG	5 cut(s)	188, 387, 396, 1319, 1633
MspR9I	CCNGG	5 cut(s)	189, 245, 388, 729, 1220
MunI	CAATTG	1 cut(s)	1429
Mva1269I	GAATGC	3 cut(s)	160, 706, 723
MvaI	CCWGG	3 cut(s)	245, 729, 1220
MvnI	CGCG	1 cut(s)	1269
MwoI	GCNNNNNNNGC	6 cut(s)	149, 216, 392, 426, 1878, 2148
NaeI	GCCGGC	1 cut(s)	397
NciI	CCSGG	2 cut(s)	189, 388
NdeI	CATATG	1 cut(s)	1498
NdeII	GATC	4 cut(s)	12, 1339, 1661, 1864
NgoMIV	GCCGGC	1 cut(s)	395
NlaIV	GGNNCC	5 cut(s)	424, 1298, 1452, 2091, 2092
NmuCI	GTSAC	1 cut(s)	1417
NsbI	TGCGCA	1 cut(s)	1392
NspI	RCATGY	2 cut(s)	901, 1470
OliI	CACNNNNGTG	1 cut(s)	1944
PaeI	GCATGC	1 cut(s)	1470
PceI	AGGCCT	1 cut(s)	566
PcsI	WCGNNNNNNNCGW	1 cut(s)	1183
PctI	GAATGC	3 cut(s)	160, 706, 723
PdiI	GCCGGC	1 cut(s)	397
PdmI	GAANNNNTTC	1 cut(s)	202
PfeI	GAWTC	3 cut(s)	33, 440, 714
PflMI	CCANNNNNTGG	1 cut(s)	1565
PkrI	GCNGC	5 cut(s)	151, 186, 1506, 1840, 2023
Ppu21I	YACGTR	2 cut(s)	1104, 1368
PpuMI	RGGWCCY	1 cut(s)	2090
PshBI	ATTAAT	1 cut(s)	1523
PsiI	TTATAA	1 cut(s)	1934
Psp124BI	GAGCTC	4 cut(s)	122, 1874, 1982, 2052
Psp5II	RGGWCCY	1 cut(s)	2090
Psp6I	CCWGG	3 cut(s)	243, 727, 1218
PspGI	CCWGG	3 cut(s)	243, 727, 1218
PspN4I	GGNNCC	5 cut(s)	424, 1298, 1452, 2091, 2092
PspPI	GGNCC	6 cut(s)	247, 1297, 1450, 1556, 1883, 2090
PspPPI	RGGWCCY	1 cut(s)	2090
PstI	CTGCAG	3 cut(s)	72, 154, 2046
PstNI	CAGNNNCTG	1 cut(s)	795
RsaI	GTAC	7 cut(s)	519, 851, 1044, 1118, 1245, 1594, 1703
RsaNI	GTAC	7 cut(s)	518, 850, 1043, 1117, 1244, 1593, 1702
RseI	CAYNNNNRTG	2 cut(s)	1944, 2127
SacI	GAGCTC	4 cut(s)	122, 1874, 1982, 2052
SalI	GTCGAC	1 cut(s)	350
SaqAI	TTAA	3 cut(s)	1170, 1523, 1994
SatI	GCNGC	5 cut(s)	150, 185, 1505, 1839, 2022
Sau3AI	GATC	4 cut(s)	12, 1339, 1661, 1864
Sau96I	GGNCC	6 cut(s)	247, 1297, 1450, 1556, 1883, 2090
ScrFI	CCNGG	5 cut(s)	189, 245, 388, 729, 1220
SduI	GDGCHC	7 cut(s)	122, 279, 590, 1690, 1874, 1982, 2052
SexAI	ACCWGGT	1 cut(s)	1218
SfaNI	GCATC	5 cut(s)	118, 754, 1415, 1891, 2001
SfcI	CTRYAG	3 cut(s)	68, 150, 2042
SinI	GGWCC	4 cut(s)	247, 1450, 1556, 2090
SmiMI	CAYNNNNRTG	2 cut(s)	1944, 2127
SmlI	CTYRAG	2 cut(s)	37, 1019
SmoI	CTYRAG	2 cut(s)	37, 1019
SnaBI	TACGTA	1 cut(s)	1368
SpeI	ACTAGT	1 cut(s)	200
SphI	GCATGC	1 cut(s)	1470
SseBI	AGGCCT	1 cut(s)	566
SspMI	CTAG	6 cut(s)	30, 201, 629, 998, 2000, 2158
SstI	GAGCTC	4 cut(s)	122, 1874, 1982, 2052
StuI	AGGCCT	1 cut(s)	566
StyD4I	CCNGG	5 cut(s)	187, 243, 386, 727, 1218
StyI	CCWWGG	1 cut(s)	946
TaaI	ACNGT	6 cut(s)	356, 407, 854, 1165, 1251, 1943
TaiI	ACGT	4 cut(s)	1006, 1106, 1243, 1370
TaqI	TCGA	7 cut(s)	80, 351, 590, 671, 985, 1237, 1623
TaqII	GACCGA	1 cut(s)	312
TatI	WGTACW	3 cut(s)	849, 1116, 1701
TauI	GCSGC	2 cut(s)	187, 1507
TfiI	GAWTC	3 cut(s)	33, 440, 714
Tru1I	TTAA	3 cut(s)	1170, 1523, 1994
Tru9I	TTAA	3 cut(s)	1170, 1523, 1994
TscAI	CASTG	6 cut(s)	442, 800, 882, 1297, 1426, 1854
TseFI	GTSAC	1 cut(s)	1417
TseI	GCWGC	3 cut(s)	149, 1838, 2021
Tsp45I	GTSAC	1 cut(s)	1417
TspDTI	ATGAA	3 cut(s)	1083, 1219, 1802
TspGWI	ACGGA	6 cut(s)	300, 306, 324, 336, 1463, 1815
TspRI	CASTG	6 cut(s)	442, 800, 882, 1297, 1426, 1854
Van91I	CCANNNNNTGG	1 cut(s)	1565
VpaK11BI	GGWCC	4 cut(s)	247, 1450, 1556, 2090
VspI	ATTAAT	1 cut(s)	1523
XapI	RAATTY	1 cut(s)	981
XbaI	TCTAGA	1 cut(s)	997
XceI	RCATGY	2 cut(s)	901, 1470
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1647
XmiI	GTMKAC	2 cut(s)	351, 938
XmnI	GAANNNNTTC	1 cut(s)	202
XspI	CTAG	6 cut(s)	30, 201, 629, 998, 2000, 2158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.