Prupe.1G033600_v2.0.a1

FHA domain-containing protein At4g14490-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
2337553 .. 2340541
2989 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G033600.1

Sequence Viewer

Length: 1218 bp
ATGGAGCCTTTAGCTCTCAAGCTGATAATGGTCCAAGGCCCGCGGGAGGGCGAAACCCTAGACTTCGGACCCCGATCCAAGGTCCGAATCGGCCGCGTCGTCCGGGGAAACAACCTCCCGATCAAAGACTCCGGCATTTCCTCCAAGCACCTCTCAATCGAATACGAATCAGGCAAATGGGTGCTCCGAGACCTCGAATCTTCAAACGGTACCCTGTTGAACGACACCAAGGTCACCCCAAACACGCCCTTGGACCTCAACGACGGCGACGAAATCAAAATCGGAGAGTACACCTCGATCACCGTGAAGTTCGACGGCTACGAGGAGAGCCGGCTCAGACGGAACCCTAGGCGTGCCGCAGTCGCAGTCGTTGAGGAGACTACGGTGGGGTCGGTTGCACAGGGTCGGGTCCAGAGAGGTAGGGCTGCGAAGGAGAGGGAAGCAAAGCGCGAGTTGGAGAAAGAAAATGCTGAGGCGATTGAGGCCGTAGGGAATCGAAGGCGGGGCCGACCGCGCAAAGCTAGGGTTTTGAAGAGTGAGGTTGAAGATGAGAAGCCGGTGGAGGAAAATTTGGTTCCGGAAATGAGTACGAGGCGAACTCGGAGCTCAAAGAATGAGGAATTGGGAAAGATTCCAGGTAATTCTGGTGTAGATGGTGGAGAGGTGAAGATTGAGCCAAAAAGGACACGTGGCGGTGCGAGGAGGAGGAAGAATGTACCAGAGGAGCTACCGGTGTGTGATAAACCTGATGTTCCTGAGCAGAGAGACTGTGTAATAATTGATGTGAAGGACGATGAGGCTTCAAAAGAGCTGAATTTTGAGGAAGAGAAACATGAAGAGGCTGGTAAAGAGTTTAATGTTAGAGTAGAGAGTGGTGATAAGGTTGACAATGGAAGTGCGAGTGGTGATAAGGTTGACAATGGAAGTGCGAGTGGTGATAAAGGTGAGAATGGAAGTGGGAGGGGTGGCAAGGGTGACAATGGAAGTAGTAGTGGTGTTAAGGGTGACAATGGAAGTGGTAGTGGTTCAGGTGTTAATGAGAGTTGTGACTTGGAGAAGATGACACTTGGCCAGTGGTTTGATTTTTTGGAGGTTCATCTGCCGAAGCAGATCATTGATGAGACGGAGGAGGTCATTGGGGAAATGGTAGAGAAAGCTAAGCGACTTCAGGAGTACATGGCACAACAGAAGGAGAAGGGTCATGTGCTTGTGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

406

Amino Acids

44.48

Weight (kDa)

5.44

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 230
Acc65I GGTACC 1 cut(s) 209
AccB1I GGYRCC 1 cut(s) 209
AccII CGCG 4 cut(s) 43, 96, 450, 514
AccIII TCCGGA 1 cut(s) 577
AciI CCGC 7 cut(s) 41, 43, 94, 357, 502, 512, 693
AclWI GGATC 1 cut(s) 69
AcoI YGGCCR 2 cut(s) 91, 1069
AcsI RAATTY 2 cut(s) 568, 814
AcuI CTGAAG 1 cut(s) 1151
AcvI CACGTG 1 cut(s) 689
AfaI GTAC 5 cut(s) 211, 290, 589, 717, 1175
AfiI CCNNNNNNNGG 3 cut(s) 46, 47, 79
AflIII ACRYGT 1 cut(s) 686
AgeI ACCGGT 1 cut(s) 730
AgsI TTSAA 5 cut(s) 204, 220, 532, 545, 804
AjnI CCWGG 1 cut(s) 634
AjuI GAANNNNNNNTTGG 2 cut(s) 605, 637
AluBI AGCT 7 cut(s) 14, 22, 521, 606, 727, 811, 1157
AluI AGCT 7 cut(s) 14, 22, 521, 606, 727, 811, 1157
Alw21I GWGCWC 2 cut(s) 186, 608
Alw26I GTCTC 4 cut(s) 183, 371, 759, 1115
AlwI GGATC 1 cut(s) 69
Aor13HI TCCGGA 1 cut(s) 577
AoxI GGCC 5 cut(s) 37, 91, 483, 505, 1069
ApeKI GCWGC 1 cut(s) 425
ApoI RAATTY 2 cut(s) 568, 814
AsiGI ACCGGT 1 cut(s) 730
Asp718I GGTACC 1 cut(s) 209
AspA2I CCTAGG 1 cut(s) 347
AspLEI GCGC 2 cut(s) 450, 516
AspS9I GGNCC 7 cut(s) 31, 38, 68, 82, 253, 409, 505
AsuC2I CCSGG 1 cut(s) 104
AsuHPI GGTGA 9 cut(s) 226, 292, 676, 887, 917, 947, 956, 986, 1016
AvaII GGWCC 5 cut(s) 31, 68, 82, 253, 409
AvrII CCTAGG 1 cut(s) 347
BalI TGGCCA 1 cut(s) 1071
BanI GGYRCC 1 cut(s) 209
BanII GRGCYC 1 cut(s) 608
BbrPI CACGTG 1 cut(s) 689
Bbv12I GWGCWC 2 cut(s) 186, 608
BbvCI CCTCAGC 1 cut(s) 471
BbvI GCAGC 1 cut(s) 412
BccI CCATC 1 cut(s) 647
BceAI ACGGC 3 cut(s) 280, 331, 470
BciT130I CCWGG 1 cut(s) 636
BcnI CCSGG 1 cut(s) 104
BcoDI GTCTC 4 cut(s) 183, 371, 759, 1115
BfaI CTAG 3 cut(s) 59, 348, 522
BisI GCNGC 3 cut(s) 94, 357, 426
BlnI CCTAGG 1 cut(s) 347
BlpI GCTNAGC 1 cut(s) 1158
BlsI GCNGC 3 cut(s) 95, 358, 427
Bme1390I CCNGG 2 cut(s) 104, 636
Bme18I GGWCC 5 cut(s) 31, 68, 82, 253, 409
BmgT120I GGNCC 7 cut(s) 31, 38, 68, 82, 253, 409, 505
BmiI GGNNCC 7 cut(s) 6, 70, 211, 344, 410, 506, 576
BmrFI CCNGG 2 cut(s) 104, 636
BplI GAGNNNNNCTC 4 cut(s) 278, 310, 583, 615
Bpu10I CCTNAGC 2 cut(s) 471, 756
Bpu1102I GCTNAGC 1 cut(s) 1158
BpuMI CCSGG 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 689
BsaI GGTCTC 1 cut(s) 183
BsaJI CCNNGG 7 cut(s) 34, 41, 78, 103, 228, 249, 347
BsaWI WCCGGW 2 cut(s) 577, 730
Bsc4I CCNNNNNNNGG 3 cut(s) 46, 47, 79
Bse118I RCCGGY 3 cut(s) 330, 556, 730
Bse1I ACTGG 1 cut(s) 1072
BseAI TCCGGA 1 cut(s) 577
BseBI CCWGG 1 cut(s) 636
BseDI CCNNGG 7 cut(s) 34, 41, 78, 103, 228, 249, 347
BseLI CCNNNNNNNGG 3 cut(s) 46, 47, 79
BseMII CTCAG 3 cut(s) 349, 462, 747
BseNI ACTGG 1 cut(s) 1072
BseRI GAGGAG 6 cut(s) 338, 389, 715, 718, 737, 1142
BseX3I CGGCCG 1 cut(s) 91
BseXI GCAGC 1 cut(s) 412
Bsh1236I CGCG 4 cut(s) 43, 96, 450, 514
Bsh1285I CGRYCG 2 cut(s) 94, 512
BshFI GGCC 5 cut(s) 39, 93, 485, 507, 1071
BshNI GGYRCC 1 cut(s) 209
BshTI ACCGGT 1 cut(s) 730
BsiEI CGRYCG 2 cut(s) 94, 512
BsiHKAI GWGCWC 2 cut(s) 186, 608
BsiSI CCGG 6 cut(s) 103, 132, 331, 557, 578, 731
BslI CCNNNNNNNGG 3 cut(s) 46, 47, 79
BsmAI GTCTC 4 cut(s) 183, 371, 759, 1115
BsmBI CGTCTC 1 cut(s) 1115
BsnI GGCC 5 cut(s) 39, 93, 485, 507, 1071
Bso31I GGTCTC 1 cut(s) 183
Bsp1286I GDGCHC 2 cut(s) 186, 608
Bsp13I TCCGGA 1 cut(s) 577
Bsp143I GATC 4 cut(s) 74, 120, 297, 1110
Bsp1720I GCTNAGC 1 cut(s) 1158
BspACI CCGC 7 cut(s) 41, 43, 94, 357, 502, 512, 693
BspANI GGCC 5 cut(s) 39, 93, 485, 507, 1071
BspCNI CTCAG 3 cut(s) 348, 463, 748
BspEI TCCGGA 1 cut(s) 577
BspFNI CGCG 4 cut(s) 43, 96, 450, 514
BspLI GGNNCC 7 cut(s) 6, 70, 211, 344, 410, 506, 576
BspPI GGATC 1 cut(s) 69
BspT107I GGYRCC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 183
BsrFI RCCGGY 3 cut(s) 330, 556, 730
BsrI ACTGG 1 cut(s) 1072
BssAI RCCGGY 3 cut(s) 330, 556, 730
BssECI CCNNGG 7 cut(s) 34, 41, 78, 103, 228, 249, 347
BssMI GATC 4 cut(s) 74, 120, 297, 1110
BssT1I CCWWGG 5 cut(s) 34, 78, 228, 249, 347
Bst2UI CCWGG 1 cut(s) 636
Bst4CI ACNGT 4 cut(s) 209, 304, 385, 770
Bst6I CTCTTC 3 cut(s) 527, 819, 831
BstBAI YACGTR 1 cut(s) 689
BstC8I GCNNGC 3 cut(s) 41, 332, 354
BstDEI CTNAG 4 cut(s) 335, 471, 756, 1158
BstDSI CCRYGG 1 cut(s) 41
BstEII GGTNACC 1 cut(s) 232
BstFNI CGCG 4 cut(s) 43, 96, 450, 514
BstHHI GCGC 2 cut(s) 450, 516
BstKTI GATC 4 cut(s) 77, 123, 300, 1113
BstMAI GTCTC 4 cut(s) 183, 371, 759, 1115
BstMBI GATC 4 cut(s) 74, 120, 297, 1110
BstMCI CGRYCG 2 cut(s) 94, 512
BstMWI GCNNNNNNNGC 3 cut(s) 362, 482, 513
BstNI CCWGG 1 cut(s) 636
BstPI GGTNACC 1 cut(s) 232
BstSCI CCNGG 2 cut(s) 102, 634
BstUI CGCG 4 cut(s) 43, 96, 450, 514
BstV1I GCAGC 1 cut(s) 412
BstZI CGGCCG 1 cut(s) 91
BsuRI GGCC 5 cut(s) 39, 93, 485, 507, 1071
BtgI CCRYGG 1 cut(s) 41
BtsIMutI CAGTG 1 cut(s) 1079
Cac8I GCNNGC 3 cut(s) 41, 332, 354
CfoI GCGC 2 cut(s) 450, 516
Cfr10I RCCGGY 3 cut(s) 330, 556, 730
Cfr13I GGNCC 7 cut(s) 31, 38, 68, 82, 253, 409, 505
Cfr42I CCGCGG 1 cut(s) 44
CseI GACGC 1 cut(s) 85
Csp6I GTAC 5 cut(s) 210, 289, 588, 716, 1174
CspAI ACCGGT 1 cut(s) 730
CspCI CAANNNNNGTGG 2 cut(s) 997, 1032
CviAII CATG 3 cut(s) 833, 1177, 1202
CviQI GTAC 5 cut(s) 210, 289, 588, 716, 1174
DdeI CTNAG 4 cut(s) 335, 471, 756, 1158
DpnI GATC 4 cut(s) 76, 122, 299, 1112
DpnII GATC 4 cut(s) 74, 120, 297, 1110
DrdI GACNNNNNNGTC 1 cut(s) 230
DseDI GACNNNNNNGTC 1 cut(s) 230
EaeI YGGCCR 2 cut(s) 91, 1069
EagI CGGCCG 1 cut(s) 91
Eam1104I CTCTTC 3 cut(s) 527, 819, 831
EarI CTCTTC 3 cut(s) 527, 819, 831
Ecl136II GAGCTC 1 cut(s) 606
EclXI CGGCCG 1 cut(s) 91
Eco130I CCWWGG 5 cut(s) 34, 78, 228, 249, 347
Eco24I GRGCYC 1 cut(s) 608
Eco31I GGTCTC 1 cut(s) 183
Eco47I GGWCC 5 cut(s) 31, 68, 82, 253, 409
Eco52I CGGCCG 1 cut(s) 91
Eco53kI GAGCTC 1 cut(s) 606
Eco57I CTGAAG 1 cut(s) 1151
Eco72I CACGTG 1 cut(s) 689
Eco91I GGTNACC 1 cut(s) 232
EcoICRI GAGCTC 1 cut(s) 606
EcoO65I GGTNACC 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 634
EcoT14I CCWWGG 5 cut(s) 34, 78, 228, 249, 347
EcoT38I GRGCYC 1 cut(s) 608
ErhI CCWWGG 5 cut(s) 34, 78, 228, 249, 347
Esp3I CGTCTC 1 cut(s) 1115
FaeI CATG 3 cut(s) 836, 1180, 1205
FaiI YATR 3 cut(s) 834, 1178, 1203
FatI CATG 3 cut(s) 832, 1176, 1201
FauI CCCGC 3 cut(s) 36, 48, 495
Fnu4HI GCNGC 3 cut(s) 94, 357, 426
FriOI GRGCYC 1 cut(s) 608
Fsp4HI GCNGC 3 cut(s) 94, 357, 426
FspBI CTAG 3 cut(s) 59, 348, 522
GlaI GCGC 2 cut(s) 449, 515
GluI GCNGC 3 cut(s) 94, 357, 426
HaeIII GGCC 5 cut(s) 39, 93, 485, 507, 1071
HapII CCGG 6 cut(s) 103, 132, 331, 557, 578, 731
HgaI GACGC 1 cut(s) 85
HhaI GCGC 2 cut(s) 450, 516
Hin1II CATG 3 cut(s) 836, 1180, 1205
Hin6I GCGC 2 cut(s) 448, 514
HinP1I GCGC 2 cut(s) 448, 514
HincII GTYRAC 2 cut(s) 886, 916
HindII GTYRAC 2 cut(s) 886, 916
HinfI GANTC 6 cut(s) 87, 128, 167, 197, 493, 631
HpaII CCGG 6 cut(s) 103, 132, 331, 557, 578, 731
HphI GGTGA 9 cut(s) 226, 292, 676, 887, 917, 947, 956, 986, 1016
Hpy166II GTNNAC 3 cut(s) 291, 886, 916
Hpy188I TCNGA 6 cut(s) 68, 86, 188, 284, 338, 603
Hpy188III TCNNGA 5 cut(s) 118, 412, 578, 755, 1169
Hpy8I GTNNAC 3 cut(s) 291, 886, 916
Hpy99I CGWCG 4 cut(s) 101, 266, 272, 317
HpyAV CCTTC 5 cut(s) 424, 492, 781, 1183, 1189
HpyCH4III ACNGT 4 cut(s) 209, 304, 385, 770
HpyCH4IV ACGT 1 cut(s) 688
HpyCH4V TGCA 1 cut(s) 398
HpyF10VI GCNNNNNNNGC 3 cut(s) 362, 482, 513
HpyF3I CTNAG 4 cut(s) 335, 471, 756, 1158
HpySE526I ACGT 1 cut(s) 688
Hsp92II CATG 3 cut(s) 836, 1180, 1205
HspAI GCGC 2 cut(s) 448, 514
Kpn2I TCCGGA 1 cut(s) 577
KpnI GGTACC 1 cut(s) 213
KroI GCCGGC 1 cut(s) 330
KroNI GCCGGC 1 cut(s) 332
KspI CCGCGG 1 cut(s) 44
Kzo9I GATC 4 cut(s) 74, 120, 297, 1110
LmnI GCTCC 4 cut(s) 4, 189, 603, 724
Lsp1109I GCAGC 1 cut(s) 412
MaeI CTAG 3 cut(s) 59, 348, 522
MaeII ACGT 1 cut(s) 688
MaeIII GTNAC 4 cut(s) 232, 974, 1004, 1046
MalI GATC 4 cut(s) 76, 122, 299, 1112
MboI GATC 4 cut(s) 74, 120, 297, 1110
MboII GAAGA 8 cut(s) 192, 544, 557, 679, 721, 836, 848, 1069
MhlI GDGCHC 2 cut(s) 186, 608
MlsI TGGCCA 1 cut(s) 1071
MluCI AATT 5 cut(s) 568, 620, 640, 777, 814
MluNI TGGCCA 1 cut(s) 1071
MlyI GAGTC 1 cut(s) 122
MmeI TCCRAC 1 cut(s) 435
Mox20I TGGCCA 1 cut(s) 1071
MroI TCCGGA 1 cut(s) 577
MroNI GCCGGC 1 cut(s) 330
MscI TGGCCA 1 cut(s) 1071
MseI TTAA 3 cut(s) 855, 999, 1035
Msp20I TGGCCA 1 cut(s) 1071
MspA1I CMGCKG 1 cut(s) 43
MspI CCGG 6 cut(s) 103, 132, 331, 557, 578, 731
MspR9I CCNGG 2 cut(s) 104, 636
MvaI CCWGG 1 cut(s) 636
MvnI CGCG 4 cut(s) 43, 96, 450, 514
MwoI GCNNNNNNNGC 3 cut(s) 362, 482, 513
NaeI GCCGGC 1 cut(s) 332
NciI CCSGG 1 cut(s) 104
NdeII GATC 4 cut(s) 74, 120, 297, 1110
NgoMIV GCCGGC 1 cut(s) 330
NlaIII CATG 3 cut(s) 836, 1180, 1205
NlaIV GGNNCC 7 cut(s) 6, 70, 211, 344, 410, 506, 576
NmuCI GTSAC 4 cut(s) 232, 974, 1004, 1046
PcsI WCGNNNNNNNCGW 3 cut(s) 96, 267, 318
PdiI GCCGGC 1 cut(s) 332
PfeI GAWTC 5 cut(s) 87, 167, 197, 493, 631
PinAI ACCGGT 1 cut(s) 730
PkrI GCNGC 3 cut(s) 95, 358, 427
PleI GAGTC 1 cut(s) 122
PmaCI CACGTG 1 cut(s) 689
PmlI CACGTG 1 cut(s) 689
PpsI GAGTC 1 cut(s) 122
Ppu21I YACGTR 1 cut(s) 689
Psp124BI GAGCTC 1 cut(s) 608
Psp6I CCWGG 1 cut(s) 634
PspCI CACGTG 1 cut(s) 689
PspEI GGTNACC 1 cut(s) 232
PspGI CCWGG 1 cut(s) 634
PspN4I GGNNCC 7 cut(s) 6, 70, 211, 344, 410, 506, 576
PspPI GGNCC 7 cut(s) 31, 38, 68, 82, 253, 409, 505
RsaI GTAC 5 cut(s) 211, 290, 589, 717, 1175
RsaNI GTAC 5 cut(s) 210, 289, 588, 716, 1174
SacI GAGCTC 1 cut(s) 608
SacII CCGCGG 1 cut(s) 44
SaqAI TTAA 3 cut(s) 855, 999, 1035
SatI GCNGC 3 cut(s) 94, 357, 426
Sau3AI GATC 4 cut(s) 74, 120, 297, 1110
Sau96I GGNCC 7 cut(s) 31, 38, 68, 82, 253, 409, 505
SchI GAGTC 1 cut(s) 122
ScrFI CCNGG 2 cut(s) 104, 636
SduI GDGCHC 2 cut(s) 186, 608
Sfr303I CCGCGG 1 cut(s) 44
SgrBI CCGCGG 1 cut(s) 44
SinI GGWCC 5 cut(s) 31, 68, 82, 253, 409
SmlI CTYRAG 1 cut(s) 17
SmoI CTYRAG 1 cut(s) 17
Sse9I AATT 5 cut(s) 568, 620, 640, 777, 814
SsiI CCGC 7 cut(s) 41, 43, 94, 357, 502, 512, 693
SspMI CTAG 3 cut(s) 59, 348, 522
SstI GAGCTC 1 cut(s) 608
StyD4I CCNGG 2 cut(s) 102, 634
StyI CCWWGG 5 cut(s) 34, 78, 228, 249, 347
TaaI ACNGT 4 cut(s) 209, 304, 385, 770
TaiI ACGT 1 cut(s) 691
TaqI TCGA 5 cut(s) 159, 195, 296, 312, 496
TasI AATT 5 cut(s) 568, 620, 640, 777, 814
TatI WGTACW 2 cut(s) 288, 1173
TauI GCSGC 2 cut(s) 96, 359
TfiI GAWTC 5 cut(s) 87, 167, 197, 493, 631
Tru1I TTAA 3 cut(s) 855, 999, 1035
Tru9I TTAA 3 cut(s) 855, 999, 1035
TscAI CASTG 1 cut(s) 1079
TseFI GTSAC 4 cut(s) 232, 974, 1004, 1046
TseI GCWGC 1 cut(s) 425
Tsp45I GTSAC 4 cut(s) 232, 974, 1004, 1046
TspDTI ATGAA 2 cut(s) 849, 1085
TspGWI ACGGA 2 cut(s) 355, 1139
TspRI CASTG 1 cut(s) 1079
VpaK11BI GGWCC 5 cut(s) 31, 68, 82, 253, 409
XapI RAATTY 2 cut(s) 568, 814
XmaJI CCTAGG 1 cut(s) 347
XspI CTAG 3 cut(s) 59, 348, 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.