FHA domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14490 |
| fragaria_vesca | FvH4_4g02980 FvH4_4g02980 FvH4_4g02980 FvH4_4g02980 |
| malus_domestica | MD13G1205500.v1.1 MD16G1211500.v1.1 |
| prunus_persica | Prupe.1G033600_v2.0.a1 |
| pyrus_communis | pycom13g17820 pycom16g17730 |
| rosa_chinensis | RchiOBHm_Chr4g0391131 RchiOBHm_Chr7g0211851 RchiOBHm_Chr7g0224291 |
| rosa_laevigata | RLG00000009886 |
| rosa_multiflora | Rmu_co8378449.1_g000001 Rmu_sc0001824.1_g000046 Rmu_sc0008872.1_g000006 Rmu_sc0009005.1_g000005 Rmu_sc0009448.1_g000001 Rmu_sc0028516.1_g000002 Rmu_sc0030074.1_g000001 Rmu_sc0032072.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00247360 Rroxscaffold_5G00336920 |
| rosa_rugosa | Rorug03G0334400 |
| rosa_samantha | Rh4AG034800 Rh4BG030000 Rh4CG038600 Rh4DG032000 Rh4DG032700 Rh7AG262000 Rh7AG381100 Rh7BG255700 Rh7CG400500 Rh7DG268500 Rh7DG367500 |
| rosa_wichuraiana | Rw4G002710 Rw7G031100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 366 |
| AccB1I | GGYRCC | 1 cut(s) | 275 |
| AccII | CGCG | 4 cut(s) | 153, 399, 404, 841 |
| AccIII | TCCGGA | 2 cut(s) | 760, 937 |
| AclWI | GGATC | 3 cut(s) | 117, 130, 229 |
| AcoI | YGGCCR | 3 cut(s) | 139, 361, 650 |
| AcsI | RAATTY | 2 cut(s) | 583, 1018 |
| AfaI | GTAC | 2 cut(s) | 113, 335 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 228, 398, 638, 1111 |
| AflIII | ACRYGT | 1 cut(s) | 336 |
| AgeI | ACCGGT | 1 cut(s) | 529 |
| AgsI | TTSAA | 3 cut(s) | 673, 806, 1018 |
| AjiI | CACGTC | 1 cut(s) | 339 |
| AjnI | CCWGG | 2 cut(s) | 118, 1383 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 575, 607, 1150, 1182, 1265, 1297 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 741, 773 |
| AluBI | AGCT | 7 cut(s) | 76, 283, 307, 662, 752, 1173, 1378 |
| AluI | AGCT | 7 cut(s) | 76, 283, 307, 662, 752, 1173, 1378 |
| Alw26I | GTCTC | 2 cut(s) | 33, 234 |
| AlwI | GGATC | 3 cut(s) | 117, 130, 229 |
| Aor13HI | TCCGGA | 2 cut(s) | 760, 937 |
| ApeKI | GCWGC | 3 cut(s) | 524, 1037, 1115 |
| ApoI | RAATTY | 2 cut(s) | 583, 1018 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1277, 1309 |
| AsiGI | ACCGGT | 1 cut(s) | 529 |
| AspLEI | GCGC | 2 cut(s) | 399, 404 |
| AsuC2I | CCSGG | 2 cut(s) | 143, 644 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| AvaII | GGWCC | 4 cut(s) | 130, 893, 965, 1092 |
| BamHI | GGATCC | 1 cut(s) | 122 |
| BanI | GGYRCC | 1 cut(s) | 275 |
| BbvI | GCAGC | 3 cut(s) | 536, 1049, 1127 |
| BccI | CCATC | 1 cut(s) | 176 |
| BceAI | ACGGC | 3 cut(s) | 283, 289, 376 |
| BciT130I | CCWGG | 2 cut(s) | 120, 1385 |
| BcnI | CCSGG | 2 cut(s) | 143, 644 |
| BcoDI | GTCTC | 2 cut(s) | 33, 234 |
| BfaI | CTAG | 2 cut(s) | 663, 1379 |
| BfuAI | ACCTGC | 1 cut(s) | 366 |
| BisI | GCNGC | 8 cut(s) | 154, 400, 405, 525, 839, 867, 1038, 1116 |
| BlpI | GCTNAGC | 2 cut(s) | 308, 1374 |
| BlsI | GCNGC | 8 cut(s) | 155, 401, 406, 526, 840, 868, 1039, 1117 |
| Bme1390I | CCNGG | 4 cut(s) | 120, 143, 644, 1385 |
| Bme18I | GGWCC | 4 cut(s) | 130, 893, 965, 1092 |
| BmgBI | CACGTC | 1 cut(s) | 339 |
| BmrFI | CCNGG | 4 cut(s) | 120, 143, 644, 1385 |
| BmsI | GCATC | 1 cut(s) | 994 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 712, 744 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1194 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 308, 1374 |
| BpuEI | CTTGAG | 1 cut(s) | 269 |
| BpuMI | CCSGG | 2 cut(s) | 143, 644 |
| BsaBI | GATNNNNATC | 1 cut(s) | 323 |
| BsaI | GGTCTC | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 6 cut(s) | 126, 151, 392, 643, 653, 839 |
| BsaWI | WCCGGW | 4 cut(s) | 221, 529, 760, 937 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 233, 263, 323, 353, 597, 627, 741, 771 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 228, 398, 638, 1111 |
| Bse118I | RCCGGY | 2 cut(s) | 529, 648 |
| Bse1I | ACTGG | 2 cut(s) | 896, 968 |
| Bse3DI | GCAATG | 1 cut(s) | 1075 |
| Bse8I | GATNNNNATC | 1 cut(s) | 323 |
| BseAI | TCCGGA | 2 cut(s) | 760, 937 |
| BseBI | CCWGG | 2 cut(s) | 120, 1385 |
| BseDI | CCNNGG | 6 cut(s) | 126, 151, 392, 643, 653, 839 |
| BseGI | GGATG | 5 cut(s) | 237, 748, 937, 1033, 1204 |
| BseJI | GATNNNNATC | 1 cut(s) | 323 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 228, 398, 638, 1111 |
| BseMI | GCAATG | 1 cut(s) | 1075 |
| BseMII | CTCAG | 5 cut(s) | 44, 63, 299, 360, 528 |
| BseNI | ACTGG | 2 cut(s) | 896, 968 |
| BseRI | GAGGAG | 3 cut(s) | 202, 241, 707 |
| BseX3I | CGGCCG | 1 cut(s) | 650 |
| BseXI | GCAGC | 3 cut(s) | 536, 1049, 1127 |
| Bsh1236I | CGCG | 4 cut(s) | 153, 399, 404, 841 |
| Bsh1285I | CGRYCG | 1 cut(s) | 653 |
| BshNI | GGYRCC | 1 cut(s) | 275 |
| BshTI | ACCGGT | 1 cut(s) | 529 |
| BsiEI | CGRYCG | 1 cut(s) | 653 |
| BslFI | GGGAC | 2 cut(s) | 433, 1228 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 228, 398, 638, 1111 |
| BsmAI | GTCTC | 2 cut(s) | 33, 234 |
| BsmFI | GGGAC | 2 cut(s) | 433, 1228 |
| Bso31I | GGTCTC | 1 cut(s) | 234 |
| Bsp13I | TCCGGA | 2 cut(s) | 760, 937 |
| Bsp143I | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 308, 1374 |
| BspCNI | CTCAG | 5 cut(s) | 43, 64, 300, 359, 529 |
| BspEI | TCCGGA | 2 cut(s) | 760, 937 |
| BspFNI | CGCG | 4 cut(s) | 153, 399, 404, 841 |
| BspHI | TCATGA | 1 cut(s) | 19 |
| BspMI | ACCTGC | 1 cut(s) | 366 |
| BspPI | GGATC | 3 cut(s) | 117, 130, 229 |
| BspT107I | GGYRCC | 1 cut(s) | 275 |
| BspTNI | GGTCTC | 1 cut(s) | 234 |
| BsrDI | GCAATG | 1 cut(s) | 1075 |
| BsrFI | RCCGGY | 2 cut(s) | 529, 648 |
| BsrI | ACTGG | 2 cut(s) | 896, 968 |
| BssAI | RCCGGY | 2 cut(s) | 529, 648 |
| BssECI | CCNNGG | 6 cut(s) | 126, 151, 392, 643, 653, 839 |
| BssMI | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| BssT1I | CCWWGG | 1 cut(s) | 126 |
| Bst2UI | CCWGG | 2 cut(s) | 120, 1385 |
| Bst4CI | ACNGT | 2 cut(s) | 424, 1127 |
| Bst6I | CTCTTC | 6 cut(s) | 36, 573, 668, 809, 1026, 1104 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 533, 835 |
| BstC8I | GCNNGC | 2 cut(s) | 564, 650 |
| BstDEI | CTNAG | 8 cut(s) | 30, 72, 308, 346, 537, 810, 1194, 1374 |
| BstDSI | CCRYGG | 2 cut(s) | 151, 839 |
| BstF5I | GGATG | 5 cut(s) | 237, 748, 937, 1033, 1204 |
| BstFNI | CGCG | 4 cut(s) | 153, 399, 404, 841 |
| BstHHI | GCGC | 2 cut(s) | 399, 404 |
| BstKTI | GATC | 6 cut(s) | 125, 237, 321, 327, 345, 357 |
| BstMAI | GTCTC | 2 cut(s) | 33, 234 |
| BstMBI | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| BstMCI | CGRYCG | 1 cut(s) | 653 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 295, 304, 533, 835 |
| BstNI | CCWGG | 2 cut(s) | 120, 1385 |
| BstSCI | CCNGG | 4 cut(s) | 118, 141, 642, 1383 |
| BstUI | CGCG | 4 cut(s) | 153, 399, 404, 841 |
| BstV1I | GCAGC | 3 cut(s) | 536, 1049, 1127 |
| BstX2I | RGATCY | 1 cut(s) | 122 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 94 |
| BstYI | RGATCY | 1 cut(s) | 122 |
| BstZI | CGGCCG | 1 cut(s) | 650 |
| BtgI | CCRYGG | 2 cut(s) | 151, 839 |
| BtrI | CACGTC | 1 cut(s) | 339 |
| BtsCI | GGATG | 5 cut(s) | 237, 748, 937, 1033, 1204 |
| BtsI | GCAGTG | 1 cut(s) | 784 |
| BtsIMutI | CAGTG | 1 cut(s) | 784 |
| BveI | ACCTGC | 1 cut(s) | 366 |
| Cac8I | GCNNGC | 2 cut(s) | 564, 650 |
| CciI | TCATGA | 1 cut(s) | 19 |
| CfoI | GCGC | 2 cut(s) | 399, 404 |
| Cfr10I | RCCGGY | 2 cut(s) | 529, 648 |
| Cfr42I | CCGCGG | 2 cut(s) | 154, 842 |
| Csp6I | GTAC | 2 cut(s) | 112, 334 |
| CspAI | ACCGGT | 1 cut(s) | 529 |
| CviAII | CATG | 4 cut(s) | 20, 53, 94, 1106 |
| CviQI | GTAC | 2 cut(s) | 112, 334 |
| DdeI | CTNAG | 8 cut(s) | 30, 72, 308, 346, 537, 810, 1194, 1374 |
| DpnI | GATC | 6 cut(s) | 124, 236, 320, 326, 344, 356 |
| DpnII | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| DraI | TTTAAA | 1 cut(s) | 64 |
| EaeI | YGGCCR | 3 cut(s) | 139, 361, 650 |
| EagI | CGGCCG | 1 cut(s) | 650 |
| Eam1104I | CTCTTC | 6 cut(s) | 36, 573, 668, 809, 1026, 1104 |
| EarI | CTCTTC | 6 cut(s) | 36, 573, 668, 809, 1026, 1104 |
| EciI | GGCGGA | 1 cut(s) | 884 |
| EclXI | CGGCCG | 1 cut(s) | 650 |
| Eco130I | CCWWGG | 1 cut(s) | 126 |
| Eco147I | AGGCCT | 1 cut(s) | 562 |
| Eco31I | GGTCTC | 1 cut(s) | 234 |
| Eco32I | GATATC | 1 cut(s) | 976 |
| Eco47I | GGWCC | 4 cut(s) | 130, 893, 965, 1092 |
| Eco52I | CGGCCG | 1 cut(s) | 650 |
| EcoRI | GAATTC | 1 cut(s) | 583 |
| EcoRII | CCWGG | 2 cut(s) | 118, 1383 |
| EcoRV | GATATC | 1 cut(s) | 976 |
| EcoT14I | CCWWGG | 1 cut(s) | 126 |
| ErhI | CCWWGG | 1 cut(s) | 126 |
| FaeI | CATG | 4 cut(s) | 23, 56, 97, 1109 |
| FaqI | GGGAC | 2 cut(s) | 433, 1228 |
| FatI | CATG | 4 cut(s) | 19, 52, 93, 1105 |
| FauI | CCCGC | 2 cut(s) | 400, 834 |
| FauNDI | CATATG | 1 cut(s) | 36 |
| Fnu4HI | GCNGC | 8 cut(s) | 154, 400, 405, 525, 839, 867, 1038, 1116 |
| FokI | GGATG | 5 cut(s) | 244, 755, 944, 1040, 1211 |
| FseI | GGCCGGCC | 1 cut(s) | 652 |
| Fsp4HI | GCNGC | 8 cut(s) | 154, 400, 405, 525, 839, 867, 1038, 1116 |
| FspBI | CTAG | 2 cut(s) | 663, 1379 |
| GlaI | GCGC | 2 cut(s) | 398, 403 |
| GluI | GCNGC | 8 cut(s) | 154, 400, 405, 525, 839, 867, 1038, 1116 |
| HhaI | GCGC | 2 cut(s) | 399, 404 |
| Hin1II | CATG | 4 cut(s) | 23, 56, 97, 1109 |
| Hin6I | GCGC | 2 cut(s) | 397, 402 |
| HinP1I | GCGC | 2 cut(s) | 397, 402 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 3 cut(s) | 271, 336, 791 |
| Hpy188I | TCNGA | 6 cut(s) | 134, 217, 239, 393, 589, 769 |
| Hpy188III | TCNNGA | 8 cut(s) | 20, 322, 352, 720, 761, 938, 954, 1356 |
| Hpy8I | GTNNAC | 3 cut(s) | 271, 336, 791 |
| Hpy99I | CGWCG | 3 cut(s) | 317, 343, 362 |
| HpyCH4III | ACNGT | 2 cut(s) | 424, 1127 |
| HpyCH4IV | ACGT | 1 cut(s) | 338 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 829 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 295, 304, 533, 835 |
| HpyF3I | CTNAG | 8 cut(s) | 30, 72, 308, 346, 537, 810, 1194, 1374 |
| HpySE526I | ACGT | 1 cut(s) | 338 |
| Hsp92II | CATG | 4 cut(s) | 23, 56, 97, 1109 |
| HspAI | GCGC | 2 cut(s) | 397, 402 |
| Kpn2I | TCCGGA | 2 cut(s) | 760, 937 |
| KroI | GCCGGC | 1 cut(s) | 648 |
| KroNI | GCCGGC | 1 cut(s) | 650 |
| KspI | CCGCGG | 2 cut(s) | 154, 842 |
| Kzo9I | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| LmnI | GCTCC | 5 cut(s) | 304, 372, 749, 1170, 1258 |
| Lsp1109I | GCAGC | 3 cut(s) | 536, 1049, 1127 |
| LweI | GCATC | 1 cut(s) | 994 |
| MaeI | CTAG | 2 cut(s) | 663, 1379 |
| MaeII | ACGT | 1 cut(s) | 338 |
| MalI | GATC | 6 cut(s) | 124, 236, 320, 326, 344, 356 |
| MboI | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| MflI | RGATCY | 1 cut(s) | 122 |
| MluCI | AATT | 8 cut(s) | 135, 482, 513, 583, 590, 888, 1018, 1096 |
| MlyI | GAGTC | 5 cut(s) | 170, 203, 242, 442, 1214 |
| MmeI | TCCRAC | 5 cut(s) | 279, 282, 1114, 1135, 1148 |
| MroI | TCCGGA | 2 cut(s) | 760, 937 |
| MroNI | GCCGGC | 1 cut(s) | 648 |
| MseI | TTAA | 6 cut(s) | 63, 456, 906, 1230, 1329, 1426 |
| MspA1I | CMGCKG | 2 cut(s) | 153, 841 |
| MspR9I | CCNGG | 4 cut(s) | 120, 143, 644, 1385 |
| MteI | GCGCNGCGC | 1 cut(s) | 400 |
| MvaI | CCWGG | 2 cut(s) | 120, 1385 |
| MvnI | CGCG | 4 cut(s) | 153, 399, 404, 841 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 295, 304, 533, 835 |
| NaeI | GCCGGC | 1 cut(s) | 650 |
| NciI | CCSGG | 2 cut(s) | 143, 644 |
| NdeI | CATATG | 1 cut(s) | 36 |
| NdeII | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| NgoMIV | GCCGGC | 1 cut(s) | 648 |
| NlaIII | CATG | 4 cut(s) | 23, 56, 97, 1109 |
| NmeAIII | GCCGAG | 1 cut(s) | 678 |
| PagI | TCATGA | 1 cut(s) | 19 |
| PceI | AGGCCT | 1 cut(s) | 562 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 213, 363 |
| PdiI | GCCGGC | 1 cut(s) | 650 |
| PfeI | GAWTC | 5 cut(s) | 218, 388, 541, 764, 950 |
| PfoI | TCCNGGA | 1 cut(s) | 1383 |
| PinAI | ACCGGT | 1 cut(s) | 529 |
| PkrI | GCNGC | 8 cut(s) | 155, 401, 406, 526, 840, 868, 1039, 1117 |
| PleI | GAGTC | 5 cut(s) | 170, 203, 242, 441, 1214 |
| PpsI | GAGTC | 5 cut(s) | 170, 203, 242, 441, 1214 |
| Psp6I | CCWGG | 2 cut(s) | 118, 1383 |
| PspGI | CCWGG | 2 cut(s) | 118, 1383 |
| PsuI | RGATCY | 1 cut(s) | 122 |
| RigI | GGCCGGCC | 1 cut(s) | 652 |
| RsaI | GTAC | 2 cut(s) | 113, 335 |
| RsaNI | GTAC | 2 cut(s) | 112, 334 |
| SacII | CCGCGG | 2 cut(s) | 154, 842 |
| SaqAI | TTAA | 6 cut(s) | 63, 456, 906, 1230, 1329, 1426 |
| SatI | GCNGC | 8 cut(s) | 154, 400, 405, 525, 839, 867, 1038, 1116 |
| Sau3AI | GATC | 6 cut(s) | 122, 234, 318, 324, 342, 354 |
| SchI | GAGTC | 5 cut(s) | 170, 203, 242, 442, 1214 |
| ScrFI | CCNGG | 4 cut(s) | 120, 143, 644, 1385 |
| SfaNI | GCATC | 1 cut(s) | 994 |
| Sfr303I | CCGCGG | 2 cut(s) | 154, 842 |
| SgrBI | CCGCGG | 2 cut(s) | 154, 842 |
| SinI | GGWCC | 4 cut(s) | 130, 893, 965, 1092 |
| SmlI | CTYRAG | 1 cut(s) | 284 |
| SmoI | CTYRAG | 1 cut(s) | 284 |
| Sse9I | AATT | 8 cut(s) | 135, 482, 513, 583, 590, 888, 1018, 1096 |
| SseBI | AGGCCT | 1 cut(s) | 562 |
| SspMI | CTAG | 2 cut(s) | 663, 1379 |
| StuI | AGGCCT | 1 cut(s) | 562 |
| StyD4I | CCNGG | 4 cut(s) | 118, 141, 642, 1383 |
| StyI | CCWWGG | 1 cut(s) | 126 |
| TaaI | ACNGT | 2 cut(s) | 424, 1127 |
| TaiI | ACGT | 1 cut(s) | 341 |
| TaqI | TCGA | 6 cut(s) | 207, 246, 341, 357, 474, 719 |
| TasI | AATT | 8 cut(s) | 135, 482, 513, 583, 590, 888, 1018, 1096 |
| TatI | WGTACW | 1 cut(s) | 333 |
| TauI | GCSGC | 5 cut(s) | 156, 402, 407, 841, 869 |
| TfiI | GAWTC | 5 cut(s) | 218, 388, 541, 764, 950 |
| Tru1I | TTAA | 6 cut(s) | 63, 456, 906, 1230, 1329, 1426 |
| Tru9I | TTAA | 6 cut(s) | 63, 456, 906, 1230, 1329, 1426 |
| TscAI | CASTG | 1 cut(s) | 784 |
| TseI | GCWGC | 3 cut(s) | 524, 1037, 1115 |
| TspDTI | ATGAA | 3 cut(s) | 8, 1044, 1122 |
| TspGWI | ACGGA | 1 cut(s) | 273 |
| TspRI | CASTG | 1 cut(s) | 784 |
| VpaK11BI | GGWCC | 4 cut(s) | 130, 893, 965, 1092 |
| XapI | RAATTY | 2 cut(s) | 583, 1018 |
| XspI | CTAG | 2 cut(s) | 663, 1379 |