Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002999

Physical Location & Seq

Genomic Coordinates Forward (+)

5261487 .. 5265534

Gene Structure 4048 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG030000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGAGCCTTTATCTCTCAAGCTCGAGATGCTCAAAGGCCCCCGGGAGGGAGAGACCCTAGAGTACCGACCCGGATCCAAGGTCCGAATCGGTCGGGTCGTCCGCGGCAACAACCTCCCCATCAAAGACTCCGGCATTTCCACCAACCACCTCATCATCGACTCCGACGAATCGGGTCAATGGATGATCCGAGACCTCGACTCCTCCAACGGAACCATCGTAAACGGCACCAAGCTCAAGCCGGACATGCCGTTGGAGCTGAGCGACGGCGACGAGATAAAGATCGGGGAGTACACGTCCATCTCCGTCAAGATCGAAGGCCATGAAGGGGACAGGTTGAGAAGGAATCCGAGGCGCGGCGCGGCGGGGAAGGTGGGGACGGTTGAGGAGAGTCGGGGCCGGAGAGGGAGGGTTAAGAAGGAGAATGAGGTCGAAGTGAAATTGGAGGTGGAGATTGAGAATGATGAGGAAATTAATGTAGCAGCACCGGTCGCTGAGAATCGGGGCCGGAGAGGTAGGCCTGCGAAGAAGAAGGAAGAGAATTCTGAATTGGAGAAAGAGGGAGAGGAAATTGAGGTGGTGGAGAAGCCGAAGAGGGGCCGGGGCCGGCCGGGGAAAGCTAGGGTTTTGAAGAGTGTGGATTTGGTGGAGGAGGTTGCTGTGCCGGAAGTGAGTTTGAGAGCAACTCAAAGGTGTAAGGATGTGGAAGCTGTGGTTCCGGATTCGGAGAATTGCAGTGTAGAGTGTGAACAAGTGAAGATTGAACCTAAGAGGCGTGGTGGGGGTAGGAAGAGGAAGAATGTGCAAGAAGTGCCGCGGGTGTGTGAGGAAGGTAATGTTGCGGCGGAGAAAAATTTGGGAGAAATTGGTCCAGTTGGTGTTAATGGTGATAACGATGATAAAGGGGATGTTCCGGAGCAGAAGGATTCGGGGGGAATAGGTCCAGTTGATATCAAGGAGAATGGCGTGTATGATGATGATGCTAAAGGGTTGAATTTGGGGGATGAAGAGGCAGCAGTCGGTTTTGATGTGGCAGAGAGTGGCAATGATAATGAGAAGGCAAAAGGGTCCGATTTGGGCCATGAAGAGGCAGCCATTGACTGTAATGTTGGAGAGAGTGGCGATAAGGTTGGAAGTGGTAGTTGGAACTGTTTTGGTGTTAATGGTGCTAAGGATGTTGATAAAAAGGGGACTGACTCTGGTGTTAAAGAAGGTTTGAGTTGGCAGGAGCCAGATTTGGAGAAGATGACTTTGGACGATTGGTTTGATTATGTGGAAGATTCTTTGCCGAAAGCGGTTAATAATGAGATTGACAAGATTTGTTCCGGAATGAGAGAGAAGGCTAAGCTAGTCCAGGAGTATATAGCACAATACAAGAAGGAGAAGTGTCAAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

465

Amino Acids

50.91

Weight (kDa)

4.94

Isoelectric Point (pI)

36.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	9 - 97	6.9e-09	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	28 - 96	5.7e-18	FHA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14490
fragaria_vesca	FvH4_4g02980 FvH4_4g02980 FvH4_4g02980 FvH4_4g02980
malus_domestica	MD13G1205500.v1.1 MD16G1211500.v1.1
prunus_persica	Prupe.1G033600_v2.0.a1
pyrus_communis	pycom13g17820 pycom16g17730
rosa_chinensis	RchiOBHm_Chr4g0391131 RchiOBHm_Chr7g0211851 RchiOBHm_Chr7g0224291
rosa_laevigata	RLG00000009886
rosa_multiflora	Rmu_co8378449.1_g000001 Rmu_sc0001824.1_g000046 Rmu_sc0008872.1_g000006 Rmu_sc0009005.1_g000005 Rmu_sc0009448.1_g000001 Rmu_sc0028516.1_g000002 Rmu_sc0030074.1_g000001 Rmu_sc0032072.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247360 Rroxscaffold_5G00336920
rosa_rugosa	Rorug03G0334400
rosa_samantha	Rh4AG034800 Rh4BG030000 Rh4CG038600 Rh4DG032000 Rh4DG032700 Rh7AG262000 Rh7AG381100 Rh7BG255700 Rh7CG400500 Rh7DG268500 Rh7DG367500
rosa_wichuraiana	Rw4G002710 Rw7G031100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	227
AccII	CGCG	4 cut(s)	105, 357, 362, 817
AccIII	TCCGGA	3 cut(s)	718, 913, 1325
AclWI	GGATC	3 cut(s)	69, 82, 181
AcoI	YGGCCR	1 cut(s)	608
AcsI	RAATTY	3 cut(s)	541, 853, 994
AfaI	GTAC	2 cut(s)	65, 293
AfiI	CCNNNNNNNGG	6 cut(s)	46, 47, 328, 356, 596, 1087
AflIII	ACRYGT	1 cut(s)	294
AgeI	ACCGGT	1 cut(s)	487
AgsI	TTSAA	3 cut(s)	631, 764, 994
AjiI	CACGTC	1 cut(s)	297
AjnI	CCWGG	1 cut(s)	1353
AjuI	GAANNNNNNNTTGG	6 cut(s)	533, 565, 1126, 1158, 1235, 1267
AluBI	AGCT	6 cut(s)	22, 235, 259, 620, 710, 1348
AluI	AGCT	6 cut(s)	22, 235, 259, 620, 710, 1348
Alw26I	GTCTC	2 cut(s)	47, 186
AlwI	GGATC	3 cut(s)	69, 82, 181
Ama87I	CYCGRG	2 cut(s)	23, 42
Aor13HI	TCCGGA	3 cut(s)	718, 913, 1325
AoxI	GGCC	9 cut(s)	37, 319, 397, 505, 518, 598, 604, 608, 1078
ApeKI	GCWGC	3 cut(s)	482, 1013, 1091
ApoI	RAATTY	3 cut(s)	541, 853, 994
ArsI	GACNNNNNNTTYG	2 cut(s)	1247, 1279
AseI	ATTAAT	1 cut(s)	474
AsiGI	ACCGGT	1 cut(s)	487
AspLEI	GCGC	2 cut(s)	357, 362
AsuC2I	CCSGG	5 cut(s)	43, 44, 72, 602, 612
AsuHPI	GGTGA	1 cut(s)	899
AvaI	CYCGRG	2 cut(s)	23, 42
AvaII	GGWCC	4 cut(s)	82, 869, 941, 1068
BamHI	GGATCC	1 cut(s)	74
BanI	GGYRCC	1 cut(s)	227
BbvI	GCAGC	3 cut(s)	494, 1025, 1103
BccI	CCATC	3 cut(s)	128, 224, 308
BceAI	ACGGC	3 cut(s)	235, 241, 283
BciT130I	CCWGG	1 cut(s)	1355
BcnI	CCSGG	5 cut(s)	43, 44, 72, 602, 612
BcoDI	GTCTC	2 cut(s)	47, 186
BfaI	CTAG	3 cut(s)	59, 621, 1349
BisI	GCNGC	8 cut(s)	106, 358, 363, 483, 815, 843, 1014, 1092
BlpI	GCTNAGC	2 cut(s)	260, 1344
BlsI	GCNGC	8 cut(s)	107, 359, 364, 484, 816, 844, 1015, 1093
Bme1390I	CCNGG	6 cut(s)	43, 44, 72, 602, 612, 1355
Bme18I	GGWCC	4 cut(s)	82, 869, 941, 1068
BmeT110I	CYCGRG	2 cut(s)	23, 42
BmgBI	CACGTC	1 cut(s)	297
BmrFI	CCNGG	6 cut(s)	43, 44, 72, 602, 612, 1355
BmsI	GCATC	2 cut(s)	18, 970
BplI	GAGNNNNNCTC	2 cut(s)	670, 702
Bpu10I	CCTNAGC	1 cut(s)	1170
Bpu1102I	GCTNAGC	2 cut(s)	260, 1344
BpuEI	CTTGAG	1 cut(s)	221
BpuMI	CCSGG	5 cut(s)	43, 44, 72, 602, 612
BsaBI	GATNNNNATC	1 cut(s)	281
BsaI	GGTCTC	2 cut(s)	47, 186
BsaJI	CCNNGG	8 cut(s)	41, 42, 78, 103, 350, 601, 611, 815
BsaWI	WCCGGW	4 cut(s)	487, 718, 913, 1325
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 215, 281, 311
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 47, 328, 356, 596, 1087
Bse118I	RCCGGY	2 cut(s)	487, 606
Bse1I	ACTGG	2 cut(s)	872, 944
Bse3DI	GCAATG	1 cut(s)	1051
Bse8I	GATNNNNATC	1 cut(s)	281
BseAI	TCCGGA	3 cut(s)	718, 913, 1325
BseBI	CCWGG	1 cut(s)	1355
BseDI	CCNNGG	8 cut(s)	41, 42, 78, 103, 350, 601, 611, 815
BseGI	GGATG	5 cut(s)	189, 706, 913, 1009, 1180
BseJI	GATNNNNATC	1 cut(s)	281
BseLI	CCNNNNNNNGG	6 cut(s)	46, 47, 328, 356, 596, 1087
BseMI	GCAATG	1 cut(s)	1051
BseMII	CTCAG	2 cut(s)	251, 486
BseNI	ACTGG	2 cut(s)	872, 944
BseRI	GAGGAG	3 cut(s)	193, 401, 665
BseX3I	CGGCCG	1 cut(s)	608
BseXI	GCAGC	3 cut(s)	494, 1025, 1103
Bsh1236I	CGCG	4 cut(s)	105, 357, 362, 817
Bsh1285I	CGRYCG	3 cut(s)	94, 492, 611
BshFI	GGCC	9 cut(s)	39, 321, 399, 507, 520, 600, 606, 610, 1080
BshNI	GGYRCC	1 cut(s)	227
BshTI	ACCGGT	1 cut(s)	487
BsiEI	CGRYCG	3 cut(s)	94, 492, 611
BsiHKCI	CYCGRG	2 cut(s)	23, 42
BslFI	GGGAC	3 cut(s)	344, 391, 1204
BslI	CCNNNNNNNGG	6 cut(s)	46, 47, 328, 356, 596, 1087
BsmAI	GTCTC	2 cut(s)	47, 186
BsmFI	GGGAC	3 cut(s)	344, 391, 1204
BsnI	GGCC	9 cut(s)	39, 321, 399, 507, 520, 600, 606, 610, 1080
Bso31I	GGTCTC	2 cut(s)	47, 186
BsoBI	CYCGRG	2 cut(s)	23, 42
Bsp13I	TCCGGA	3 cut(s)	718, 913, 1325
Bsp143I	GATC	4 cut(s)	74, 186, 282, 312
Bsp1720I	GCTNAGC	2 cut(s)	260, 1344
BspANI	GGCC	9 cut(s)	39, 321, 399, 507, 520, 600, 606, 610, 1080
BspCNI	CTCAG	2 cut(s)	252, 487
BspEI	TCCGGA	3 cut(s)	718, 913, 1325
BspFNI	CGCG	4 cut(s)	105, 357, 362, 817
BspPI	GGATC	3 cut(s)	69, 82, 181
BspT107I	GGYRCC	1 cut(s)	227
BspTNI	GGTCTC	2 cut(s)	47, 186
BsrDI	GCAATG	1 cut(s)	1051
BsrFI	RCCGGY	2 cut(s)	487, 606
BsrI	ACTGG	2 cut(s)	872, 944
BssAI	RCCGGY	2 cut(s)	487, 606
BssECI	CCNNGG	8 cut(s)	41, 42, 78, 103, 350, 601, 611, 815
BssMI	GATC	4 cut(s)	74, 186, 282, 312
BssT1I	CCWWGG	1 cut(s)	78
Bst2UI	CCWGG	1 cut(s)	1355
Bst4CI	ACNGT	3 cut(s)	382, 1103, 1151
Bst6I	CTCTTC	6 cut(s)	531, 587, 626, 785, 1002, 1080
BstAPI	GCANNNNNTGC	1 cut(s)	811
BstC8I	GCNNGC	2 cut(s)	522, 608
BstDEI	CTNAG	5 cut(s)	260, 495, 768, 1170, 1344
BstDSI	CCRYGG	2 cut(s)	103, 815
BstF5I	GGATG	5 cut(s)	189, 706, 913, 1009, 1180
BstFNI	CGCG	4 cut(s)	105, 357, 362, 817
BstHHI	GCGC	2 cut(s)	357, 362
BstKTI	GATC	4 cut(s)	77, 189, 285, 315
BstMAI	GTCTC	2 cut(s)	47, 186
BstMBI	GATC	4 cut(s)	74, 186, 282, 312
BstMCI	CGRYCG	3 cut(s)	94, 492, 611
BstMWI	GCNNNNNNNGC	5 cut(s)	28, 247, 256, 491, 811
BstNI	CCWGG	1 cut(s)	1355
BstNSI	RCATGY	1 cut(s)	250
BstSCI	CCNGG	6 cut(s)	41, 42, 70, 600, 610, 1353
BstUI	CGCG	4 cut(s)	105, 357, 362, 817
BstV1I	GCAGC	3 cut(s)	494, 1025, 1103
BstX2I	RGATCY	1 cut(s)	74
BstYI	RGATCY	1 cut(s)	74
BstZI	CGGCCG	1 cut(s)	608
BsuRI	GGCC	9 cut(s)	39, 321, 399, 507, 520, 600, 606, 610, 1080
BtgI	CCRYGG	2 cut(s)	103, 815
BtrI	CACGTC	1 cut(s)	297
BtsCI	GGATG	5 cut(s)	189, 706, 913, 1009, 1180
BtsI	GCAGTG	1 cut(s)	742
BtsIMutI	CAGTG	1 cut(s)	742
Cac8I	GCNNGC	2 cut(s)	522, 608
CfoI	GCGC	2 cut(s)	357, 362
Cfr10I	RCCGGY	2 cut(s)	487, 606
Cfr42I	CCGCGG	2 cut(s)	106, 818
Cfr9I	CCCGGG	1 cut(s)	42
Csp6I	GTAC	2 cut(s)	64, 292
CspAI	ACCGGT	1 cut(s)	487
CviAII	CATG	3 cut(s)	247, 323, 1082
CviQI	GTAC	2 cut(s)	64, 292
DdeI	CTNAG	5 cut(s)	260, 495, 768, 1170, 1344
DpnI	GATC	4 cut(s)	76, 188, 284, 314
DpnII	GATC	4 cut(s)	74, 186, 282, 312
EaeI	YGGCCR	1 cut(s)	608
EagI	CGGCCG	1 cut(s)	608
Eam1104I	CTCTTC	6 cut(s)	531, 587, 626, 785, 1002, 1080
EarI	CTCTTC	6 cut(s)	531, 587, 626, 785, 1002, 1080
EciI	GGCGGA	1 cut(s)	860
EclXI	CGGCCG	1 cut(s)	608
Eco130I	CCWWGG	1 cut(s)	78
Eco147I	AGGCCT	1 cut(s)	520
Eco31I	GGTCTC	2 cut(s)	47, 186
Eco32I	GATATC	1 cut(s)	952
Eco47I	GGWCC	4 cut(s)	82, 869, 941, 1068
Eco52I	CGGCCG	1 cut(s)	608
Eco88I	CYCGRG	2 cut(s)	23, 42
EcoO109I	RGGNCCY	1 cut(s)	38
EcoRI	GAATTC	1 cut(s)	541
EcoRII	CCWGG	1 cut(s)	1353
EcoRV	GATATC	1 cut(s)	952
EcoT14I	CCWWGG	1 cut(s)	78
ErhI	CCWWGG	1 cut(s)	78
FaeI	CATG	3 cut(s)	250, 326, 1085
FaiI	YATR	7 cut(s)	248, 324, 972, 1083, 1272, 1362, 1364
FaqI	GGGAC	3 cut(s)	344, 391, 1204
FatI	CATG	3 cut(s)	246, 322, 1081
FauI	CCCGC	2 cut(s)	358, 810
Fnu4HI	GCNGC	8 cut(s)	106, 358, 363, 483, 815, 843, 1014, 1092
FokI	GGATG	5 cut(s)	196, 713, 920, 1016, 1187
FseI	GGCCGGCC	1 cut(s)	610
Fsp4HI	GCNGC	8 cut(s)	106, 358, 363, 483, 815, 843, 1014, 1092
FspBI	CTAG	3 cut(s)	59, 621, 1349
GlaI	GCGC	2 cut(s)	356, 361
GluI	GCNGC	8 cut(s)	106, 358, 363, 483, 815, 843, 1014, 1092
HaeIII	GGCC	9 cut(s)	39, 321, 399, 507, 520, 600, 606, 610, 1080
HhaI	GCGC	2 cut(s)	357, 362
Hin1II	CATG	3 cut(s)	250, 326, 1085
Hin6I	GCGC	2 cut(s)	355, 360
HinP1I	GCGC	2 cut(s)	355, 360
HphI	GGTGA	1 cut(s)	899
Hpy166II	GTNNAC	3 cut(s)	223, 294, 749
Hpy188I	TCNGA	7 cut(s)	86, 166, 191, 351, 547, 727, 1072
Hpy188III	TCNNGA	5 cut(s)	25, 310, 719, 914, 1326
Hpy8I	GTNNAC	3 cut(s)	223, 294, 749
Hpy99I	CGWCG	3 cut(s)	170, 269, 275
HpyCH4III	ACNGT	3 cut(s)	382, 1103, 1151
HpyCH4IV	ACGT	1 cut(s)	296
HpyCH4V	TGCA	2 cut(s)	735, 805
HpyF10VI	GCNNNNNNNGC	5 cut(s)	28, 247, 256, 491, 811
HpyF3I	CTNAG	5 cut(s)	260, 495, 768, 1170, 1344
HpySE526I	ACGT	1 cut(s)	296
Hsp92II	CATG	3 cut(s)	250, 326, 1085
HspAI	GCGC	2 cut(s)	355, 360
Kpn2I	TCCGGA	3 cut(s)	718, 913, 1325
KroI	GCCGGC	1 cut(s)	606
KroNI	GCCGGC	1 cut(s)	608
KspI	CCGCGG	2 cut(s)	106, 818
Kzo9I	GATC	4 cut(s)	74, 186, 282, 312
LmnI	GCTCC	4 cut(s)	4, 256, 916, 1228
Lsp1109I	GCAGC	3 cut(s)	494, 1025, 1103
LweI	GCATC	2 cut(s)	18, 970
MaeI	CTAG	3 cut(s)	59, 621, 1349
MaeII	ACGT	1 cut(s)	296
MalI	GATC	4 cut(s)	76, 188, 284, 314
MboI	GATC	4 cut(s)	74, 186, 282, 312
MflI	RGATCY	1 cut(s)	74
MluCI	AATT	9 cut(s)	440, 471, 541, 548, 570, 730, 853, 864, 994
MlyI	GAGTC	5 cut(s)	122, 155, 194, 400, 1190
MmeI	TCCRAC	6 cut(s)	189, 231, 234, 1090, 1111, 1124
MroI	TCCGGA	3 cut(s)	718, 913, 1325
MroNI	GCCGGC	1 cut(s)	606
MseI	TTAA	7 cut(s)	414, 474, 882, 1161, 1206, 1299, 1396
MspA1I	CMGCKG	2 cut(s)	105, 817
MspR9I	CCNGG	6 cut(s)	43, 44, 72, 602, 612, 1355
MteI	GCGCNGCGC	1 cut(s)	358
MvaI	CCWGG	1 cut(s)	1355
MvnI	CGCG	4 cut(s)	105, 357, 362, 817
MwoI	GCNNNNNNNGC	5 cut(s)	28, 247, 256, 491, 811
NaeI	GCCGGC	1 cut(s)	608
NciI	CCSGG	5 cut(s)	43, 44, 72, 602, 612
NdeII	GATC	4 cut(s)	74, 186, 282, 312
NgoMIV	GCCGGC	1 cut(s)	606
NlaIII	CATG	3 cut(s)	250, 326, 1085
NspI	RCATGY	1 cut(s)	250
PaeR7I	CTCGAG	1 cut(s)	23
PceI	AGGCCT	1 cut(s)	520
PcsI	WCGNNNNNNNCGW	3 cut(s)	96, 165, 216
PdiI	GCCGGC	1 cut(s)	608
PfeI	GAWTC	7 cut(s)	87, 170, 346, 499, 722, 926, 1280
PfoI	TCCNGGA	1 cut(s)	1353
PinAI	ACCGGT	1 cut(s)	487
PkrI	GCNGC	8 cut(s)	107, 359, 364, 484, 816, 844, 1015, 1093
PleI	GAGTC	5 cut(s)	122, 155, 194, 399, 1190
PpsI	GAGTC	5 cut(s)	122, 155, 194, 399, 1190
PshBI	ATTAAT	1 cut(s)	474
Psp6I	CCWGG	1 cut(s)	1353
PspGI	CCWGG	1 cut(s)	1353
PsuI	RGATCY	1 cut(s)	74
RigI	GGCCGGCC	1 cut(s)	610
RsaI	GTAC	2 cut(s)	65, 293
RsaNI	GTAC	2 cut(s)	64, 292
SacII	CCGCGG	2 cut(s)	106, 818
SaqAI	TTAA	7 cut(s)	414, 474, 882, 1161, 1206, 1299, 1396
SatI	GCNGC	8 cut(s)	106, 358, 363, 483, 815, 843, 1014, 1092
Sau3AI	GATC	4 cut(s)	74, 186, 282, 312
SchI	GAGTC	5 cut(s)	122, 155, 194, 400, 1190
ScrFI	CCNGG	6 cut(s)	43, 44, 72, 602, 612, 1355
SfaNI	GCATC	2 cut(s)	18, 970
Sfr274I	CTCGAG	1 cut(s)	23
Sfr303I	CCGCGG	2 cut(s)	106, 818
SgrBI	CCGCGG	2 cut(s)	106, 818
SinI	GGWCC	4 cut(s)	82, 869, 941, 1068
SlaI	CTCGAG	1 cut(s)	23
SmaI	CCCGGG	1 cut(s)	44
SmlI	CTYRAG	3 cut(s)	17, 23, 236
SmoI	CTYRAG	3 cut(s)	17, 23, 236
Sse9I	AATT	9 cut(s)	440, 471, 541, 548, 570, 730, 853, 864, 994
SseBI	AGGCCT	1 cut(s)	520
SspMI	CTAG	3 cut(s)	59, 621, 1349
StuI	AGGCCT	1 cut(s)	520
StyD4I	CCNGG	6 cut(s)	41, 42, 70, 600, 610, 1353
StyI	CCWWGG	1 cut(s)	78
TaaI	ACNGT	3 cut(s)	382, 1103, 1151
TaiI	ACGT	1 cut(s)	299
TaqI	TCGA	5 cut(s)	24, 159, 198, 315, 432
TaqII	GACCGA	1 cut(s)	80
TasI	AATT	9 cut(s)	440, 471, 541, 548, 570, 730, 853, 864, 994
TatI	WGTACW	1 cut(s)	291
TauI	GCSGC	5 cut(s)	108, 360, 365, 817, 845
TfiI	GAWTC	7 cut(s)	87, 170, 346, 499, 722, 926, 1280
Tru1I	TTAA	7 cut(s)	414, 474, 882, 1161, 1206, 1299, 1396
Tru9I	TTAA	7 cut(s)	414, 474, 882, 1161, 1206, 1299, 1396
TscAI	CASTG	1 cut(s)	742
TseI	GCWGC	3 cut(s)	482, 1013, 1091
TspDTI	ATGAA	3 cut(s)	339, 1020, 1098
TspGWI	ACGGA	2 cut(s)	225, 295
TspMI	CCCGGG	1 cut(s)	42
TspRI	CASTG	1 cut(s)	742
VpaK11BI	GGWCC	4 cut(s)	82, 869, 941, 1068
VspI	ATTAAT	1 cut(s)	474
XapI	RAATTY	3 cut(s)	541, 853, 994
XceI	RCATGY	1 cut(s)	250
XhoI	CTCGAG	1 cut(s)	23
XmaI	CCCGGG	1 cut(s)	42
XspI	CTAG	3 cut(s)	59, 621, 1349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.