Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08530 AT3G11130 |
| fragaria_vesca | FvH4_3g39020 FvH4_7g24660 FvH4_7g24660 |
| malus_domestica | MD01G1154700.v1.1 MD03G1065300.v1.1 MD07G1223800.v1.1 MD11G1070100.v1.1 |
| prunus_persica | Prupe.2G252300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 |
| pyrus_communis | pycom01g17210 pycom03g05230 pycom07g20230 pycom07g20240 pycom11g05860 |
| rosa_chinensis | RchiOBHm_Chr1g0370491 RchiOBHm_Chr5g0070331 |
| rosa_laevigata | RLG00000027035 RLG00000036125 |
| rosa_multiflora | Rmu_sc0002558.1_g000009 Rmu_sc0007961.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00010850 Rroxscaffold_4G00286510 |
| rosa_rugosa | Rorug01G0357300 Rorug05G0404900 |
| rosa_samantha | Rh1AG365800 Rh1BG329500 Rh1CG341800 Rh1CG343600 Rh5AG460600 Rh5BG478900 Rh5CG503100 Rh5DG490800 |
| rosa_wichuraiana | Rw1G032230 Rw5G042930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4257 |
| AarI | CACCTGC | 1 cut(s) | 4383 |
| Acc36I | ACCTGC | 3 cut(s) | 1549, 3208, 4383 |
| Acc65I | GGTACC | 1 cut(s) | 3507 |
| AccB1I | GGYRCC | 3 cut(s) | 743, 1115, 3507 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 3454, 3499, 5006, 5075 |
| AccBSI | CCGCTC | 1 cut(s) | 2362 |
| AccI | GTMKAC | 1 cut(s) | 3489 |
| AccII | CGCG | 2 cut(s) | 11, 989 |
| AccIII | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| AcoI | YGGCCR | 2 cut(s) | 6, 1092 |
| AcsI | RAATTY | 6 cut(s) | 226, 568, 1209, 1238, 1529, 3987 |
| AcuI | CTGAAG | 6 cut(s) | 1688, 1772, 2063, 2538, 3079, 4212 |
| AcvI | CACGTG | 2 cut(s) | 2750, 4343 |
| AcyI | GRCGYC | 1 cut(s) | 2307 |
| AdeI | CACNNNGTG | 1 cut(s) | 4328 |
| AflIII | ACRYGT | 9 cut(s) | 88, 727, 1954, 2662, 2749, 4340, 4342, 4567, 4959 |
| AhlI | ACTAGT | 2 cut(s) | 3733, 4879 |
| AjiI | CACGTC | 2 cut(s) | 1349, 4568 |
| AjnI | CCWGG | 9 cut(s) | 532, 649, 751, 1005, 1111, 2467, 3369, 4196, 5005 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1838, 1870 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1761, 1793 |
| Alw26I | GTCTC | 7 cut(s) | 122, 843, 896, 1653, 4426, 4558, 4652 |
| Alw44I | GTGCAC | 1 cut(s) | 4265 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4975 |
| Aor13HI | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| AoxI | GGCC | 9 cut(s) | 6, 191, 548, 1003, 1092, 3666, 3714, 3859, 4522 |
| ApaLI | GTGCAC | 1 cut(s) | 4265 |
| ApoI | RAATTY | 6 cut(s) | 226, 568, 1209, 1238, 1529, 3987 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3022, 3054 |
| AseI | ATTAAT | 6 cut(s) | 63, 1026, 2367, 2835, 3053, 3174 |
| Asp718I | GGTACC | 1 cut(s) | 3507 |
| AspLEI | GCGC | 1 cut(s) | 600 |
| AspS9I | GGNCC | 6 cut(s) | 1003, 1296, 1792, 3197, 3667, 3714 |
| AsuC2I | CCSGG | 1 cut(s) | 3392 |
| AsuHPI | GGTGA | 8 cut(s) | 16, 269, 2473, 3514, 3659, 4364, 4688, 4924 |
| AvaII | GGWCC | 3 cut(s) | 1296, 1792, 3197 |
| BaeGI | GKGCMC | 2 cut(s) | 748, 4269 |
| BalI | TGGCCA | 1 cut(s) | 1094 |
| BamHI | GGATCC | 2 cut(s) | 940, 2212 |
| BanI | GGYRCC | 3 cut(s) | 743, 1115, 3507 |
| BanII | GRGCYC | 7 cut(s) | 741, 1921, 2204, 2574, 2996, 3543, 3561 |
| BauI | CACGAG | 3 cut(s) | 1308, 2019, 4547 |
| BbrPI | CACGTG | 2 cut(s) | 2750, 4343 |
| BbsI | GAAGAC | 2 cut(s) | 1448, 2950 |
| BbvCI | CCTCAGC | 1 cut(s) | 3831 |
| BccI | CCATC | 5 cut(s) | 769, 3146, 3188, 3511, 4181 |
| BceAI | ACGGC | 2 cut(s) | 2793, 3344 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2410, 2444 |
| BciT130I | CCWGG | 9 cut(s) | 534, 651, 753, 1007, 1113, 2469, 3371, 4198, 5007 |
| BclI | TGATCA | 2 cut(s) | 2128, 2956 |
| BcnI | CCSGG | 1 cut(s) | 3392 |
| BcoDI | GTCTC | 7 cut(s) | 122, 843, 896, 1653, 4426, 4558, 4652 |
| BcuI | ACTAGT | 2 cut(s) | 3733, 4879 |
| BfaI | CTAG | 8 cut(s) | 909, 2286, 3156, 3182, 3734, 3962, 4017, 4880 |
| BfmI | CTRYAG | 3 cut(s) | 393, 3201, 4841 |
| BfuAI | ACCTGC | 3 cut(s) | 1549, 3208, 4383 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 3143, 3722 |
| BglII | AGATCT | 6 cut(s) | 784, 1432, 2047, 2398, 2902, 4291 |
| BlpI | GCTNAGC | 2 cut(s) | 2340, 3844 |
| BmcAI | AGTACT | 1 cut(s) | 1289 |
| Bme18I | GGWCC | 3 cut(s) | 1296, 1792, 3197 |
| BmgBI | CACGTC | 2 cut(s) | 1349, 4568 |
| BmgT120I | GGNCC | 6 cut(s) | 1003, 1296, 1792, 3197, 3667, 3714 |
| BmrI | ACTGGG | 4 cut(s) | 815, 1272, 1436, 3721 |
| BmuI | ACTGGG | 4 cut(s) | 815, 1272, 1436, 3721 |
| BpiI | GAAGAC | 2 cut(s) | 1448, 2950 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 650, 682, 1302, 1334, 4649, 4681 |
| BpmI | CTGGAG | 1 cut(s) | 783 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2100, 3831 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2340, 3844 |
| BpuEI | CTTGAG | 2 cut(s) | 1817, 2188 |
| BpuMI | CCSGG | 1 cut(s) | 3392 |
| BsaAI | YACGTR | 2 cut(s) | 2750, 4343 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1455, 1544, 2901 |
| BsaHI | GRCGYC | 1 cut(s) | 2307 |
| BsaWI | WCCGGW | 4 cut(s) | 541, 937, 2255, 4027 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1422, 1452 |
| Bse1I | ACTGG | 8 cut(s) | 410, 821, 1267, 1394, 1431, 1670, 3716, 4867 |
| Bse3DI | GCAATG | 1 cut(s) | 2555 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1455, 1544, 2901 |
| BseAI | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| BseBI | CCWGG | 9 cut(s) | 534, 651, 753, 1007, 1113, 2469, 3371, 4198, 5007 |
| BseGI | GGATG | 9 cut(s) | 1750, 2902, 3442, 3463, 3484, 3889, 3929, 4285, 4809 |
| BseJI | GATNNNNATC | 3 cut(s) | 1455, 1544, 2901 |
| BseMI | GCAATG | 1 cut(s) | 2555 |
| BseNI | ACTGG | 8 cut(s) | 410, 821, 1267, 1394, 1431, 1670, 3716, 4867 |
| BseRI | GAGGAG | 5 cut(s) | 202, 3848, 4475, 4709, 5019 |
| BseSI | GKGCMC | 2 cut(s) | 748, 4269 |
| BseX3I | CGGCCG | 1 cut(s) | 6 |
| BseYI | CCCAGC | 3 cut(s) | 747, 1884, 3228 |
| BsgI | GTGCAG | 3 cut(s) | 195, 933, 4977 |
| Bsh1236I | CGCG | 2 cut(s) | 11, 989 |
| Bsh1285I | CGRYCG | 2 cut(s) | 9, 2360 |
| BshFI | GGCC | 9 cut(s) | 8, 193, 550, 1005, 1094, 3668, 3716, 3861, 4524 |
| BshNI | GGYRCC | 3 cut(s) | 743, 1115, 3507 |
| BsiEI | CGRYCG | 2 cut(s) | 9, 2360 |
| BsiSI | CCGG | 5 cut(s) | 542, 938, 2256, 3391, 4028 |
| BsiWI | CGTACG | 1 cut(s) | 1217 |
| BslFI | GGGAC | 3 cut(s) | 1183, 1309, 2505 |
| BsmAI | GTCTC | 7 cut(s) | 122, 843, 896, 1653, 4426, 4558, 4652 |
| BsmBI | CGTCTC | 1 cut(s) | 4558 |
| BsmFI | GGGAC | 3 cut(s) | 1183, 1309, 2505 |
| BsmI | GAATGC | 8 cut(s) | 706, 1418, 2479, 2591, 3338, 4450, 4739, 5055 |
| BsnI | GGCC | 9 cut(s) | 8, 193, 550, 1005, 1094, 3668, 3716, 3861, 4524 |
| Bsp13I | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| Bsp1407I | TGTACA | 3 cut(s) | 2089, 2415, 2659 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2340, 3844 |
| Bsp19I | CCATGG | 1 cut(s) | 4653 |
| BspANI | GGCC | 9 cut(s) | 8, 193, 550, 1005, 1094, 3668, 3716, 3861, 4524 |
| BspEI | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| BspFNI | CGCG | 2 cut(s) | 11, 989 |
| BspHI | TCATGA | 2 cut(s) | 3027, 4176 |
| BspMAI | CTGCAG | 1 cut(s) | 3205 |
| BspMI | ACCTGC | 3 cut(s) | 1549, 3208, 4383 |
| BspT107I | GGYRCC | 3 cut(s) | 743, 1115, 3507 |
| BsrBI | CCGCTC | 1 cut(s) | 2362 |
| BsrDI | GCAATG | 1 cut(s) | 2555 |
| BsrGI | TGTACA | 3 cut(s) | 2089, 2415, 2659 |
| BsrI | ACTGG | 8 cut(s) | 410, 821, 1267, 1394, 1431, 1670, 3716, 4867 |
| BssNI | GRCGYC | 1 cut(s) | 2307 |
| BssSI | CACGAG | 3 cut(s) | 1308, 2019, 4547 |
| BssT1I | CCWWGG | 6 cut(s) | 259, 1788, 2185, 3543, 3754, 4653 |
| Bst2BI | CACGAG | 3 cut(s) | 1308, 2019, 4547 |
| Bst2UI | CCWGG | 9 cut(s) | 534, 651, 753, 1007, 1113, 2469, 3371, 4198, 5007 |
| Bst6I | CTCTTC | 6 cut(s) | 584, 1703, 2588, 3597, 3888, 4926 |
| BstACI | GRCGYC | 1 cut(s) | 2307 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 623, 632, 1514, 3121 |
| BstAUI | TGTACA | 3 cut(s) | 2089, 2415, 2659 |
| BstBAI | YACGTR | 2 cut(s) | 2750, 4343 |
| BstDSI | CCRYGG | 2 cut(s) | 2809, 4653 |
| BstEII | GGTNACC | 2 cut(s) | 4370, 4676 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 2579, 3674, 5043 |
| BstF5I | GGATG | 9 cut(s) | 1750, 2902, 3442, 3463, 3484, 3889, 3929, 4285, 4809 |
| BstFNI | CGCG | 2 cut(s) | 11, 989 |
| BstHHI | GCGC | 1 cut(s) | 600 |
| BstMAI | GTCTC | 7 cut(s) | 122, 843, 896, 1653, 4426, 4558, 4652 |
| BstMCI | CGRYCG | 2 cut(s) | 9, 2360 |
| BstNI | CCWGG | 9 cut(s) | 534, 651, 753, 1007, 1113, 2469, 3371, 4198, 5007 |
| BstPI | GGTNACC | 2 cut(s) | 4370, 4676 |
| BstSFI | CTRYAG | 3 cut(s) | 393, 3201, 4841 |
| BstSLI | GKGCMC | 2 cut(s) | 748, 4269 |
| BstUI | CGCG | 2 cut(s) | 11, 989 |
| BstV2I | GAAGAC | 2 cut(s) | 1448, 2950 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3644 |
| BstZI | CGGCCG | 1 cut(s) | 6 |
| BsuRI | GGCC | 9 cut(s) | 8, 193, 550, 1005, 1094, 3668, 3716, 3861, 4524 |
| BtgI | CCRYGG | 2 cut(s) | 2809, 4653 |
| BtgZI | GCGATG | 1 cut(s) | 3423 |
| BtrI | CACGTC | 2 cut(s) | 1349, 4568 |
| BtsCI | GGATG | 9 cut(s) | 1750, 2902, 3442, 3463, 3484, 3889, 3929, 4285, 4809 |
| BtsI | GCAGTG | 2 cut(s) | 198, 1423 |
| BtsIMutI | CAGTG | 9 cut(s) | 198, 402, 403, 1060, 1423, 3103, 3793, 3907, 4860 |
| BveI | ACCTGC | 3 cut(s) | 1549, 3208, 4383 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4975 |
| CciI | TCATGA | 2 cut(s) | 3027, 4176 |
| CciNI | GCGGCCGC | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 600 |
| Cfr13I | GGNCC | 6 cut(s) | 1003, 1296, 1792, 3197, 3667, 3714 |
| CseI | GACGC | 1 cut(s) | 2315 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1263, 1298, 2862, 2897 |
| DraIII | CACNNNGTG | 1 cut(s) | 4328 |
| EaeI | YGGCCR | 2 cut(s) | 6, 1092 |
| EagI | CGGCCG | 1 cut(s) | 6 |
| Eam1104I | CTCTTC | 6 cut(s) | 584, 1703, 2588, 3597, 3888, 4926 |
| EarI | CTCTTC | 6 cut(s) | 584, 1703, 2588, 3597, 3888, 4926 |
| EciI | GGCGGA | 1 cut(s) | 5022 |
| Ecl136II | GAGCTC | 4 cut(s) | 739, 1919, 2202, 3559 |
| EclXI | CGGCCG | 1 cut(s) | 6 |
| Eco130I | CCWWGG | 6 cut(s) | 259, 1788, 2185, 3543, 3754, 4653 |
| Eco147I | AGGCCT | 1 cut(s) | 4524 |
| Eco24I | GRGCYC | 7 cut(s) | 741, 1921, 2204, 2574, 2996, 3543, 3561 |
| Eco32I | GATATC | 2 cut(s) | 2221, 4022 |
| Eco47I | GGWCC | 3 cut(s) | 1296, 1792, 3197 |
| Eco52I | CGGCCG | 1 cut(s) | 6 |
| Eco53kI | GAGCTC | 4 cut(s) | 739, 1919, 2202, 3559 |
| Eco57I | CTGAAG | 6 cut(s) | 1688, 1772, 2063, 2538, 3079, 4212 |
| Eco72I | CACGTG | 2 cut(s) | 2750, 4343 |
| Eco91I | GGTNACC | 2 cut(s) | 4370, 4676 |
| EcoICRI | GAGCTC | 4 cut(s) | 739, 1919, 2202, 3559 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 2579, 3674, 5043 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1296, 1792, 3667 |
| EcoO65I | GGTNACC | 2 cut(s) | 4370, 4676 |
| EcoRI | GAATTC | 1 cut(s) | 1209 |
| EcoRII | CCWGG | 9 cut(s) | 532, 649, 751, 1005, 1111, 2467, 3369, 4196, 5005 |
| EcoRV | GATATC | 2 cut(s) | 2221, 4022 |
| EcoT14I | CCWWGG | 6 cut(s) | 259, 1788, 2185, 3543, 3754, 4653 |
| EcoT22I | ATGCAT | 2 cut(s) | 2138, 3571 |
| EcoT38I | GRGCYC | 7 cut(s) | 741, 1921, 2204, 2574, 2996, 3543, 3561 |
| ErhI | CCWWGG | 6 cut(s) | 259, 1788, 2185, 3543, 3754, 4653 |
| Esp3I | CGTCTC | 1 cut(s) | 4558 |
| FaqI | GGGAC | 3 cut(s) | 1183, 1309, 2505 |
| FauI | CCCGC | 1 cut(s) | 993 |
| FauNDI | CATATG | 2 cut(s) | 116, 2164 |
| FbaI | TGATCA | 2 cut(s) | 2128, 2956 |
| FblI | GTMKAC | 1 cut(s) | 3489 |
| FokI | GGATG | 9 cut(s) | 1757, 2909, 3449, 3470, 3491, 3896, 3936, 4272, 4816 |
| FriOI | GRGCYC | 7 cut(s) | 741, 1921, 2204, 2574, 2996, 3543, 3561 |
| FspBI | CTAG | 8 cut(s) | 909, 2286, 3156, 3182, 3734, 3962, 4017, 4880 |
| GlaI | GCGC | 1 cut(s) | 599 |
| GsaI | CCCAGC | 3 cut(s) | 751, 1888, 3232 |
| GsuI | CTGGAG | 1 cut(s) | 783 |
| HaeIII | GGCC | 9 cut(s) | 8, 193, 550, 1005, 1094, 3668, 3716, 3861, 4524 |
| HapII | CCGG | 5 cut(s) | 542, 938, 2256, 3391, 4028 |
| HgaI | GACGC | 1 cut(s) | 2315 |
| HhaI | GCGC | 1 cut(s) | 600 |
| Hin1I | GRCGYC | 1 cut(s) | 2307 |
| Hin6I | GCGC | 1 cut(s) | 598 |
| HinP1I | GCGC | 1 cut(s) | 598 |
| HincII | GTYRAC | 2 cut(s) | 3289, 4351 |
| HindII | GTYRAC | 2 cut(s) | 3289, 4351 |
| HindIII | AAGCTT | 3 cut(s) | 872, 2141, 4082 |
| HpaI | GTTAAC | 1 cut(s) | 3289 |
| HpaII | CCGG | 5 cut(s) | 542, 938, 2256, 3391, 4028 |
| HphI | GGTGA | 8 cut(s) | 16, 269, 2473, 3514, 3659, 4364, 4688, 4924 |
| HpyCH4IV | ACGT | 8 cut(s) | 1348, 1954, 2749, 2776, 3291, 3973, 4342, 4567 |
| HpySE526I | ACGT | 8 cut(s) | 1348, 1954, 2749, 2776, 3291, 3973, 4342, 4567 |
| Hsp92I | GRCGYC | 1 cut(s) | 2307 |
| HspAI | GCGC | 1 cut(s) | 598 |
| KflI | GGGWCCC | 1 cut(s) | 1296 |
| Kpn2I | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| KpnI | GGTACC | 1 cut(s) | 3511 |
| Ksp22I | TGATCA | 2 cut(s) | 2128, 2956 |
| KspAI | GTTAAC | 1 cut(s) | 3289 |
| MaeI | CTAG | 8 cut(s) | 909, 2286, 3156, 3182, 3734, 3962, 4017, 4880 |
| MaeII | ACGT | 8 cut(s) | 1348, 1954, 2749, 2776, 3291, 3973, 4342, 4567 |
| MbiI | CCGCTC | 1 cut(s) | 2362 |
| MfeI | CAATTG | 3 cut(s) | 411, 554, 4491 |
| MlsI | TGGCCA | 1 cut(s) | 1094 |
| MluNI | TGGCCA | 1 cut(s) | 1094 |
| MlyI | GAGTC | 6 cut(s) | 200, 431, 664, 1205, 1340, 3428 |
| MmeI | TCCRAC | 3 cut(s) | 405, 502, 955 |
| Mox20I | TGGCCA | 1 cut(s) | 1094 |
| Mph1103I | ATGCAT | 2 cut(s) | 2138, 3571 |
| MroI | TCCGGA | 3 cut(s) | 541, 937, 4027 |
| MscI | TGGCCA | 1 cut(s) | 1094 |
| MslI | CAYNNNNRTG | 5 cut(s) | 299, 833, 2023, 2035, 4341 |
| Msp20I | TGGCCA | 1 cut(s) | 1094 |
| MspA1I | CMGCKG | 2 cut(s) | 2246, 3232 |
| MspI | CCGG | 5 cut(s) | 542, 938, 2256, 3391, 4028 |
| MunI | CAATTG | 3 cut(s) | 411, 554, 4491 |
| Mva1269I | GAATGC | 8 cut(s) | 706, 1418, 2479, 2591, 3338, 4450, 4739, 5055 |
| MvaI | CCWGG | 9 cut(s) | 534, 651, 753, 1007, 1113, 2469, 3371, 4198, 5007 |
| MvnI | CGCG | 2 cut(s) | 11, 989 |
| NciI | CCSGG | 1 cut(s) | 3392 |
| NcoI | CCATGG | 1 cut(s) | 4653 |
| NdeI | CATATG | 2 cut(s) | 116, 2164 |
| NmeAIII | GCCGAG | 2 cut(s) | 1543, 2335 |
| NmuCI | GTSAC | 7 cut(s) | 382, 1810, 1989, 2777, 2839, 4370, 4676 |
| NotI | GCGGCCGC | 1 cut(s) | 6 |
| NsiI | ATGCAT | 2 cut(s) | 2138, 3571 |
| PaeI | GCATGC | 2 cut(s) | 5068, 5083 |
| PagI | TCATGA | 2 cut(s) | 3027, 4176 |
| PaqCI | CACCTGC | 1 cut(s) | 4383 |
| PceI | AGGCCT | 1 cut(s) | 4524 |
| PciI | ACATGT | 4 cut(s) | 88, 727, 2662, 4959 |
| PctI | GAATGC | 8 cut(s) | 706, 1418, 2479, 2591, 3338, 4450, 4739, 5055 |
| Pfl23II | CGTACG | 1 cut(s) | 1217 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 3454, 3499, 5006, 5075 |
| PfoI | TCCNGGA | 1 cut(s) | 3390 |
| PleI | GAGTC | 6 cut(s) | 200, 430, 664, 1204, 1339, 3427 |
| PmaCI | CACGTG | 2 cut(s) | 2750, 4343 |
| PmlI | CACGTG | 2 cut(s) | 2750, 4343 |
| PpsI | GAGTC | 6 cut(s) | 200, 430, 664, 1204, 1339, 3427 |
| Ppu21I | YACGTR | 2 cut(s) | 2750, 4343 |
| PpuMI | RGGWCCY | 2 cut(s) | 1296, 1792 |
| PscI | ACATGT | 4 cut(s) | 88, 727, 2662, 4959 |
| PshBI | ATTAAT | 6 cut(s) | 63, 1026, 2367, 2835, 3053, 3174 |
| PsiI | TTATAA | 1 cut(s) | 4257 |
| Psp124BI | GAGCTC | 4 cut(s) | 741, 1921, 2204, 3561 |
| Psp5II | RGGWCCY | 2 cut(s) | 1296, 1792 |
| Psp6I | CCWGG | 9 cut(s) | 532, 649, 751, 1005, 1111, 2467, 3369, 4196, 5005 |
| PspCI | CACGTG | 2 cut(s) | 2750, 4343 |
| PspEI | GGTNACC | 2 cut(s) | 4370, 4676 |
| PspFI | CCCAGC | 3 cut(s) | 747, 1884, 3228 |
| PspGI | CCWGG | 9 cut(s) | 532, 649, 751, 1005, 1111, 2467, 3369, 4196, 5005 |
| PspLI | CGTACG | 1 cut(s) | 1217 |
| PspPI | GGNCC | 6 cut(s) | 1003, 1296, 1792, 3197, 3667, 3714 |
| PspPPI | RGGWCCY | 2 cut(s) | 1296, 1792 |
| PstI | CTGCAG | 1 cut(s) | 3205 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4975 |
| PvuII | CAGCTG | 2 cut(s) | 2246, 3232 |
| RseI | CAYNNNNRTG | 5 cut(s) | 299, 833, 2023, 2035, 4341 |
| SacI | GAGCTC | 4 cut(s) | 741, 1921, 2204, 3561 |
| Sau96I | GGNCC | 6 cut(s) | 1003, 1296, 1792, 3197, 3667, 3714 |
| ScaI | AGTACT | 1 cut(s) | 1289 |
| SchI | GAGTC | 6 cut(s) | 200, 431, 664, 1205, 1340, 3428 |
| SfcI | CTRYAG | 3 cut(s) | 393, 3201, 4841 |
| SinI | GGWCC | 3 cut(s) | 1296, 1792, 3197 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 299, 833, 2023, 2035, 4341 |
| SmlI | CTYRAG | 2 cut(s) | 1796, 2203 |
| SmoI | CTYRAG | 2 cut(s) | 1796, 2203 |
| SpeI | ACTAGT | 2 cut(s) | 3733, 4879 |
| SphI | GCATGC | 2 cut(s) | 5068, 5083 |
| SseBI | AGGCCT | 1 cut(s) | 4524 |
| SspI | AATATT | 4 cut(s) | 288, 2765, 3693, 4075 |
| SspMI | CTAG | 8 cut(s) | 909, 2286, 3156, 3182, 3734, 3962, 4017, 4880 |
| SstI | GAGCTC | 4 cut(s) | 741, 1921, 2204, 3561 |
| StuI | AGGCCT | 1 cut(s) | 4524 |
| StyI | CCWWGG | 6 cut(s) | 259, 1788, 2185, 3543, 3754, 4653 |
| TaiI | ACGT | 8 cut(s) | 1351, 1957, 2752, 2779, 3294, 3976, 4345, 4570 |
| TaqI | TCGA | 6 cut(s) | 668, 1329, 1410, 1606, 1876, 2602 |
| TauI | GCSGC | 5 cut(s) | 8, 11, 139, 2703, 3014 |
| TscAI | CASTG | 9 cut(s) | 205, 402, 410, 1060, 1423, 3103, 3793, 3907, 4867 |
| TseFI | GTSAC | 7 cut(s) | 382, 1810, 1989, 2777, 2839, 4370, 4676 |
| Tsp45I | GTSAC | 7 cut(s) | 382, 1810, 1989, 2777, 2839, 4370, 4676 |
| TspGWI | ACGGA | 5 cut(s) | 1205, 2540, 3141, 3332, 4841 |
| TspRI | CASTG | 9 cut(s) | 205, 402, 410, 1060, 1423, 3103, 3793, 3907, 4867 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 3454, 3499, 5006, 5075 |
| VneI | GTGCAC | 1 cut(s) | 4265 |
| VpaK11BI | GGWCC | 3 cut(s) | 1296, 1792, 3197 |
| VspI | ATTAAT | 6 cut(s) | 63, 1026, 2367, 2835, 3053, 3174 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 2579, 3674, 5043 |
| XapI | RAATTY | 6 cut(s) | 226, 568, 1209, 1238, 1529, 3987 |
| XbaI | TCTAGA | 1 cut(s) | 3155 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3451 |
| XmiI | GTMKAC | 1 cut(s) | 3489 |
| XspI | CTAG | 8 cut(s) | 909, 2286, 3156, 3182, 3734, 3962, 4017, 4880 |
| ZrmI | AGTACT | 1 cut(s) | 1289 |
| Zsp2I | ATGCAT | 2 cut(s) | 2138, 3571 |