Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08530 AT3G11130 |
| fragaria_vesca | FvH4_3g39020 FvH4_7g24660 FvH4_7g24660 |
| malus_domestica | MD01G1154700.v1.1 MD03G1065300.v1.1 MD07G1223800.v1.1 MD11G1070100.v1.1 |
| prunus_persica | Prupe.2G252300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 |
| pyrus_communis | pycom01g17210 pycom03g05230 pycom07g20230 pycom07g20240 pycom11g05860 |
| rosa_chinensis | RchiOBHm_Chr1g0370491 RchiOBHm_Chr5g0070331 |
| rosa_laevigata | RLG00000027035 RLG00000036125 |
| rosa_multiflora | Rmu_sc0002558.1_g000009 Rmu_sc0007961.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00010850 Rroxscaffold_4G00286510 |
| rosa_rugosa | Rorug01G0357300 Rorug05G0404900 |
| rosa_samantha | Rh1AG365800 Rh1BG329500 Rh1CG341800 Rh1CG343600 Rh5AG460600 Rh5BG478900 Rh5CG503100 Rh5DG490800 |
| rosa_wichuraiana | Rw1G032230 Rw5G042930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1373 |
| Acc36I | ACCTGC | 1 cut(s) | 1792 |
| AccB1I | GGYRCC | 3 cut(s) | 239, 986, 1358 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2123, 2869 |
| AccBSI | CCGCTC | 1 cut(s) | 691 |
| AccI | GTMKAC | 4 cut(s) | 5, 102, 433, 2660 |
| AccII | CGCG | 2 cut(s) | 65, 1436 |
| AccIII | TCCGGA | 1 cut(s) | 1042 |
| AclI | AACGTT | 2 cut(s) | 287, 3080 |
| AcoI | YGGCCR | 2 cut(s) | 246, 2085 |
| AcsI | RAATTY | 5 cut(s) | 56, 477, 1481, 1772, 3093 |
| AcuI | CTGAAG | 5 cut(s) | 1224, 1931, 2015, 2306, 2781 |
| AfaI | GTAC | 8 cut(s) | 31, 356, 1287, 1462, 2334, 2420, 2477, 2904 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 209, 235, 236, 299, 2015, 2123, 2412, 2869 |
| AflIII | ACRYGT | 1 cut(s) | 2905 |
| AgeI | ACCGGT | 1 cut(s) | 2806 |
| AjiI | CACGTC | 1 cut(s) | 2600 |
| AjnI | CCWGG | 9 cut(s) | 775, 892, 994, 1248, 1354, 1368, 1860, 2710, 3110 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2081, 2113 |
| Alw21I | GWGCWC | 1 cut(s) | 2447 |
| Alw26I | GTCTC | 3 cut(s) | 365, 1139, 1896 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1154 |
| Ama87I | CYCGRG | 2 cut(s) | 235, 1728 |
| Aor13HI | TCCGGA | 1 cut(s) | 1042 |
| AoxI | GGCC | 6 cut(s) | 246, 279, 791, 1246, 2085, 3113 |
| ApeKI | GCWGC | 9 cut(s) | 421, 817, 866, 1421, 1751, 2486, 2489, 2737, 3189 |
| ApoI | RAATTY | 5 cut(s) | 56, 477, 1481, 1772, 3093 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 685, 717, 2020, 2052 |
| AseI | ATTAAT | 1 cut(s) | 2610 |
| AsiGI | ACCGGT | 1 cut(s) | 2806 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2257 |
| AspA2I | CCTAGG | 1 cut(s) | 2428 |
| AspLEI | GCGC | 2 cut(s) | 65, 2435 |
| AspS9I | GGNCC | 5 cut(s) | 213, 280, 517, 1366, 3159 |
| AsuC2I | CCSGG | 4 cut(s) | 236, 237, 1729, 1730 |
| AsuHPI | GGTGA | 4 cut(s) | 674, 1924, 2638, 2851 |
| AsuNHI | GCTAGC | 1 cut(s) | 1636 |
| AvaI | CYCGRG | 2 cut(s) | 235, 1728 |
| AvaII | GGWCC | 4 cut(s) | 213, 517, 1366, 3159 |
| AvrII | CCTAGG | 1 cut(s) | 2428 |
| AxyI | CCTNAGG | 1 cut(s) | 2229 |
| BaeGI | GKGCMC | 3 cut(s) | 242, 991, 2164 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1269, 1302 |
| BalI | TGGCCA | 1 cut(s) | 2087 |
| BamHI | GGATCC | 2 cut(s) | 2455, 3021 |
| BanI | GGYRCC | 3 cut(s) | 239, 986, 1358 |
| BanII | GRGCYC | 3 cut(s) | 2275, 2447, 2817 |
| BauI | CACGAG | 1 cut(s) | 2990 |
| BbsI | GAAGAC | 2 cut(s) | 1691, 2840 |
| Bbv12I | GWGCWC | 1 cut(s) | 2447 |
| BbvI | GCAGC | 8 cut(s) | 433, 829, 853, 1408, 1763, 2476, 2498, 2749 |
| BccI | CCATC | 3 cut(s) | 916, 1012, 1937 |
| BceAI | ACGGC | 1 cut(s) | 711 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2653, 2687 |
| BciT130I | CCWGG | 9 cut(s) | 777, 894, 996, 1250, 1356, 1370, 1862, 2712, 3112 |
| BciVI | GTATCC | 1 cut(s) | 1446 |
| BcnI | CCSGG | 4 cut(s) | 236, 237, 1729, 1730 |
| BcoDI | GTCTC | 3 cut(s) | 365, 1139, 1896 |
| BfaI | CTAG | 6 cut(s) | 294, 1142, 1551, 1637, 1652, 2429 |
| BfmI | CTRYAG | 6 cut(s) | 82, 1155, 1422, 2024, 2165, 2262 |
| BfuAI | ACCTGC | 1 cut(s) | 1792 |
| BfuI | GTATCC | 1 cut(s) | 1446 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 452 |
| BglII | AGATCT | 3 cut(s) | 1675, 2290, 2641 |
| BlnI | CCTAGG | 1 cut(s) | 2428 |
| Bme18I | GGWCC | 4 cut(s) | 213, 517, 1366, 3159 |
| BmeT110I | CYCGRG | 2 cut(s) | 235, 1728 |
| BmgBI | CACGTC | 1 cut(s) | 2600 |
| BmgT120I | GGNCC | 5 cut(s) | 213, 280, 517, 1366, 3159 |
| BmiI | GGNNCC | 7 cut(s) | 214, 241, 988, 1360, 1385, 2457, 3023 |
| BmrI | ACTGGG | 1 cut(s) | 2372 |
| BmsI | GCATC | 7 cut(s) | 561, 603, 878, 913, 957, 2065, 2884 |
| BmtI | GCTAGC | 1 cut(s) | 1640 |
| BmuI | ACTGGG | 1 cut(s) | 2372 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2598 |
| BpiI | GAAGAC | 2 cut(s) | 1691, 2840 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 835, 867, 1545, 1577 |
| BpmI | CTGGAG | 2 cut(s) | 2431, 3094 |
| Bpu10I | CCTNAGC | 4 cut(s) | 576, 2010, 2955, 3155 |
| BpuEI | CTTGAG | 2 cut(s) | 480, 2297 |
| BpuMI | CCSGG | 4 cut(s) | 236, 237, 1729, 1730 |
| Bsa29I | ATCGAT | 2 cut(s) | 47, 402 |
| BsaAI | YACGTR | 1 cut(s) | 2120 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3143 |
| BsaWI | WCCGGW | 3 cut(s) | 21, 1042, 2806 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 71, 101, 1665, 1695 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 209, 235, 236, 299, 2015, 2123, 2412, 2869 |
| Bse118I | RCCGGY | 1 cut(s) | 2806 |
| Bse1I | ACTGG | 4 cut(s) | 1064, 2367, 2448, 2503 |
| Bse21I | CCTNAGG | 1 cut(s) | 2229 |
| Bse3DI | GCAATG | 2 cut(s) | 425, 3064 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3143 |
| BseAI | TCCGGA | 1 cut(s) | 1042 |
| BseBI | CCWGG | 9 cut(s) | 777, 894, 996, 1250, 1356, 1370, 1862, 2712, 3112 |
| BseCI | ATCGAT | 2 cut(s) | 47, 402 |
| BseGI | GGATG | 4 cut(s) | 904, 1993, 2752, 3144 |
| BseJI | GATNNNNATC | 1 cut(s) | 3143 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 209, 235, 236, 299, 2015, 2123, 2412, 2869 |
| BseMI | GCAATG | 2 cut(s) | 425, 3064 |
| BseNI | ACTGG | 4 cut(s) | 1064, 2367, 2448, 2503 |
| BseRI | GAGGAG | 3 cut(s) | 79, 82, 145 |
| BseSI | GKGCMC | 3 cut(s) | 242, 991, 2164 |
| BseXI | GCAGC | 8 cut(s) | 433, 829, 853, 1408, 1763, 2476, 2498, 2749 |
| BseYI | CCCAGC | 3 cut(s) | 616, 990, 1505 |
| Bsh1236I | CGCG | 2 cut(s) | 65, 1436 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2113 |
| BshFI | GGCC | 6 cut(s) | 248, 281, 793, 1248, 2087, 3115 |
| BshNI | GGYRCC | 3 cut(s) | 239, 986, 1358 |
| BshTI | ACCGGT | 1 cut(s) | 2806 |
| BshVI | ATCGAT | 2 cut(s) | 47, 402 |
| BsiEI | CGRYCG | 1 cut(s) | 2113 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2447 |
| BsiHKCI | CYCGRG | 2 cut(s) | 235, 1728 |
| BsiSI | CCGG | 5 cut(s) | 22, 236, 1043, 1729, 2807 |
| BslFI | GGGAC | 1 cut(s) | 1896 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 209, 235, 236, 299, 2015, 2123, 2412, 2869 |
| BsmAI | GTCTC | 3 cut(s) | 365, 1139, 1896 |
| BsmFI | GGGAC | 1 cut(s) | 1896 |
| BsmI | GAATGC | 2 cut(s) | 2759, 2834 |
| BsnI | GGCC | 6 cut(s) | 248, 281, 793, 1248, 2087, 3115 |
| BsoBI | CYCGRG | 2 cut(s) | 235, 1728 |
| Bsp1286I | GDGCHC | 6 cut(s) | 242, 991, 2164, 2275, 2447, 2817 |
| Bsp13I | TCCGGA | 1 cut(s) | 1042 |
| Bsp1407I | TGTACA | 2 cut(s) | 2332, 2902 |
| Bsp19I | CCATGG | 1 cut(s) | 243 |
| BspANI | GGCC | 6 cut(s) | 248, 281, 793, 1248, 2087, 3115 |
| BspDI | ATCGAT | 2 cut(s) | 47, 402 |
| BspEI | TCCGGA | 1 cut(s) | 1042 |
| BspFNI | CGCG | 2 cut(s) | 65, 1436 |
| BspLI | GGNNCC | 7 cut(s) | 214, 241, 988, 1360, 1385, 2457, 3023 |
| BspMAI | CTGCAG | 2 cut(s) | 1159, 1426 |
| BspMI | ACCTGC | 1 cut(s) | 1792 |
| BspOI | GCTAGC | 1 cut(s) | 1640 |
| BspQI | GCTCTTC | 1 cut(s) | 1659 |
| BspT107I | GGYRCC | 3 cut(s) | 239, 986, 1358 |
| BsrBI | CCGCTC | 1 cut(s) | 691 |
| BsrDI | GCAATG | 2 cut(s) | 425, 3064 |
| BsrFI | RCCGGY | 1 cut(s) | 2806 |
| BsrGI | TGTACA | 2 cut(s) | 2332, 2902 |
| BsrI | ACTGG | 4 cut(s) | 1064, 2367, 2448, 2503 |
| BssAI | RCCGGY | 1 cut(s) | 2806 |
| BssNAI | GTATAC | 3 cut(s) | 6, 103, 2661 |
| BssSI | CACGAG | 1 cut(s) | 2990 |
| BssT1I | CCWWGG | 3 cut(s) | 243, 2343, 2428 |
| Bst1107I | GTATAC | 3 cut(s) | 6, 103, 2661 |
| Bst2BI | CACGAG | 1 cut(s) | 2990 |
| Bst2UI | CCWGG | 9 cut(s) | 777, 894, 996, 1250, 1356, 1370, 1862, 2712, 3112 |
| Bst4CI | ACNGT | 9 cut(s) | 731, 1216, 1267, 1395, 1474, 1521, 1587, 1690, 3049 |
| Bst6I | CTCTTC | 3 cut(s) | 100, 1659, 2805 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 427, 866, 875, 1430, 1757 |
| BstAUI | TGTACA | 2 cut(s) | 2332, 2902 |
| BstBAI | YACGTR | 1 cut(s) | 2120 |
| BstC8I | GCNNGC | 9 cut(s) | 413, 1023, 1323, 1431, 1503, 1638, 1851, 2160, 2855 |
| BstDSI | CCRYGG | 2 cut(s) | 243, 1434 |
| BstF5I | GGATG | 4 cut(s) | 904, 1993, 2752, 3144 |
| BstFNI | CGCG | 2 cut(s) | 65, 1436 |
| BstHHI | GCGC | 2 cut(s) | 65, 2435 |
| BstMAI | GTCTC | 3 cut(s) | 365, 1139, 1896 |
| BstMCI | CGRYCG | 1 cut(s) | 2113 |
| BstNI | CCWGG | 9 cut(s) | 777, 894, 996, 1250, 1356, 1370, 1862, 2712, 3112 |
| BstNSI | RCATGY | 6 cut(s) | 335, 415, 866, 974, 2219, 2909 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2598 |
| BstSFI | CTRYAG | 6 cut(s) | 82, 1155, 1422, 2024, 2165, 2262 |
| BstSLI | GKGCMC | 3 cut(s) | 242, 991, 2164 |
| BstUI | CGCG | 2 cut(s) | 65, 1436 |
| BstV1I | GCAGC | 8 cut(s) | 433, 829, 853, 1408, 1763, 2476, 2498, 2749 |
| BstV2I | GAAGAC | 2 cut(s) | 1691, 2840 |
| BstX2I | RGATCY | 8 cut(s) | 121, 1183, 1675, 1855, 2290, 2455, 2641, 3021 |
| BstYI | RGATCY | 8 cut(s) | 121, 1183, 1675, 1855, 2290, 2455, 2641, 3021 |
| BstZ17I | GTATAC | 3 cut(s) | 6, 103, 2661 |
| Bsu15I | ATCGAT | 2 cut(s) | 47, 402 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2229 |
| BsuI | GTATCC | 1 cut(s) | 1446 |
| BsuRI | GGCC | 6 cut(s) | 248, 281, 793, 1248, 2087, 3115 |
| BsuTUI | ATCGAT | 2 cut(s) | 47, 402 |
| BtgI | CCRYGG | 2 cut(s) | 243, 1434 |
| BtgZI | GCGATG | 2 cut(s) | 360, 3077 |
| BtrI | CACGTC | 1 cut(s) | 2600 |
| BtsCI | GGATG | 4 cut(s) | 904, 1993, 2752, 3144 |
| BtsI | GCAGTG | 1 cut(s) | 1332 |
| BtsIMutI | CAGTG | 5 cut(s) | 1263, 1332, 1695, 2175, 2455 |
| BveI | ACCTGC | 1 cut(s) | 1792 |
| Cac8I | GCNNGC | 9 cut(s) | 413, 1023, 1323, 1431, 1503, 1638, 1851, 2160, 2855 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1154 |
| CfoI | GCGC | 2 cut(s) | 65, 2435 |
| Cfr10I | RCCGGY | 1 cut(s) | 2806 |
| Cfr13I | GGNCC | 5 cut(s) | 213, 280, 517, 1366, 3159 |
| Cfr42I | CCGCGG | 1 cut(s) | 1437 |
| Cfr9I | CCCGGG | 2 cut(s) | 235, 1728 |
| ClaI | ATCGAT | 2 cut(s) | 47, 402 |
| CseI | GACGC | 3 cut(s) | 379, 419, 2603 |
| CsiI | ACCWGGT | 1 cut(s) | 1368 |
| Csp6I | GTAC | 8 cut(s) | 30, 355, 1286, 1461, 2333, 2419, 2476, 2903 |
| CspAI | ACCGGT | 1 cut(s) | 2806 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1506, 1541 |
| CviQI | GTAC | 8 cut(s) | 30, 355, 1286, 1461, 2333, 2419, 2476, 2903 |
| DraI | TTTAAA | 1 cut(s) | 489 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1373 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1373 |
| EaeI | YGGCCR | 2 cut(s) | 246, 2085 |
| Eam1104I | CTCTTC | 3 cut(s) | 100, 1659, 2805 |
| EarI | CTCTTC | 3 cut(s) | 100, 1659, 2805 |
| Ecl136II | GAGCTC | 1 cut(s) | 2445 |
| Eco130I | CCWWGG | 3 cut(s) | 243, 2343, 2428 |
| Eco24I | GRGCYC | 3 cut(s) | 2275, 2447, 2817 |
| Eco32I | GATATC | 3 cut(s) | 1080, 2191, 2464 |
| Eco47I | GGWCC | 4 cut(s) | 213, 517, 1366, 3159 |
| Eco53kI | GAGCTC | 1 cut(s) | 2445 |
| Eco57I | CTGAAG | 5 cut(s) | 1224, 1931, 2015, 2306, 2781 |
| Eco81I | CCTNAGG | 1 cut(s) | 2229 |
| Eco88I | CYCGRG | 2 cut(s) | 235, 1728 |
| EcoICRI | GAGCTC | 1 cut(s) | 2445 |
| EcoO109I | RGGNCCY | 4 cut(s) | 213, 280, 1366, 3159 |
| EcoRI | GAATTC | 1 cut(s) | 477 |
| EcoRII | CCWGG | 9 cut(s) | 775, 892, 994, 1248, 1354, 1368, 1860, 2710, 3110 |
| EcoRV | GATATC | 3 cut(s) | 1080, 2191, 2464 |
| EcoT14I | CCWWGG | 3 cut(s) | 243, 2343, 2428 |
| EcoT22I | ATGCAT | 2 cut(s) | 972, 2381 |
| EcoT38I | GRGCYC | 3 cut(s) | 2275, 2447, 2817 |
| ErhI | CCWWGG | 3 cut(s) | 243, 2343, 2428 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2571, 2603 |
| FaqI | GGGAC | 1 cut(s) | 1896 |
| FauI | CCCGC | 1 cut(s) | 1842 |
| FblI | GTMKAC | 4 cut(s) | 5, 102, 433, 2660 |
| FokI | GGATG | 4 cut(s) | 891, 2000, 2759, 3151 |
| FriOI | GRGCYC | 3 cut(s) | 2275, 2447, 2817 |
| FspBI | CTAG | 6 cut(s) | 294, 1142, 1551, 1637, 1652, 2429 |
| GlaI | GCGC | 2 cut(s) | 64, 2434 |
| GsaI | CCCAGC | 3 cut(s) | 620, 994, 1509 |
| GsuI | CTGGAG | 2 cut(s) | 2431, 3094 |
| HaeIII | GGCC | 6 cut(s) | 248, 281, 793, 1248, 2087, 3115 |
| HapII | CCGG | 5 cut(s) | 22, 236, 1043, 1729, 2807 |
| HgaI | GACGC | 3 cut(s) | 379, 419, 2603 |
| HhaI | GCGC | 2 cut(s) | 65, 2435 |
| Hin6I | GCGC | 2 cut(s) | 63, 2433 |
| HinP1I | GCGC | 2 cut(s) | 63, 2433 |
| HincII | GTYRAC | 4 cut(s) | 36, 434, 2129, 3078 |
| HindII | GTYRAC | 4 cut(s) | 36, 434, 2129, 3078 |
| HindIII | AAGCTT | 3 cut(s) | 1115, 1206, 2585 |
| HpaI | GTTAAC | 1 cut(s) | 3078 |
| HpaII | CCGG | 5 cut(s) | 22, 236, 1043, 1729, 2807 |
| HphI | GGTGA | 4 cut(s) | 674, 1924, 2638, 2851 |
| Hpy99I | CGWCG | 2 cut(s) | 395, 435 |
| HpyAV | CCTTC | 9 cut(s) | 170, 653, 750, 1361, 1761, 1841, 1955, 2681, 3179 |
| HpyCH4III | ACNGT | 9 cut(s) | 731, 1216, 1267, 1395, 1474, 1521, 1587, 1690, 3049 |
| HpyCH4IV | ACGT | 7 cut(s) | 32, 287, 323, 1591, 2119, 2599, 3080 |
| HpySE526I | ACGT | 7 cut(s) | 32, 287, 323, 1591, 2119, 2599, 3080 |
| HspAI | GCGC | 2 cut(s) | 63, 2433 |
| Kpn2I | TCCGGA | 1 cut(s) | 1042 |
| KspAI | GTTAAC | 1 cut(s) | 3078 |
| KspI | CCGCGG | 1 cut(s) | 1437 |
| LguI | GCTCTTC | 1 cut(s) | 1659 |
| LmnI | GCTCC | 6 cut(s) | 92, 778, 2450, 2518, 2725, 2872 |
| Lsp1109I | GCAGC | 8 cut(s) | 433, 829, 853, 1408, 1763, 2476, 2498, 2749 |
| LweI | GCATC | 7 cut(s) | 561, 603, 878, 913, 957, 2065, 2884 |
| MabI | ACCWGGT | 1 cut(s) | 1368 |
| MaeI | CTAG | 6 cut(s) | 294, 1142, 1551, 1637, 1652, 2429 |
| MaeII | ACGT | 7 cut(s) | 32, 287, 323, 1591, 2119, 2599, 3080 |
| MaeIII | GTNAC | 8 cut(s) | 334, 625, 955, 1587, 2053, 2524, 2678, 3081 |
| MbiI | CCGCTC | 1 cut(s) | 691 |
| MfeI | CAATTG | 2 cut(s) | 1281, 2220 |
| MflI | RGATCY | 8 cut(s) | 121, 1183, 1675, 1855, 2290, 2455, 2641, 3021 |
| MhlI | GDGCHC | 6 cut(s) | 242, 991, 2164, 2275, 2447, 2817 |
| MlsI | TGGCCA | 1 cut(s) | 2087 |
| MluNI | TGGCCA | 1 cut(s) | 2087 |
| MlyI | GAGTC | 4 cut(s) | 126, 443, 853, 1339 |
| MmeI | TCCRAC | 2 cut(s) | 1786, 1965 |
| Mox20I | TGGCCA | 1 cut(s) | 2087 |
| Mph1103I | ATGCAT | 2 cut(s) | 972, 2381 |
| MroI | TCCGGA | 1 cut(s) | 1042 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2257 |
| MscI | TGGCCA | 1 cut(s) | 2087 |
| MslI | CAYNNNNRTG | 4 cut(s) | 269, 404, 416, 542 |
| Msp20I | TGGCCA | 1 cut(s) | 2087 |
| MspA1I | CMGCKG | 5 cut(s) | 1202, 1381, 1436, 2489, 3192 |
| MspI | CCGG | 5 cut(s) | 22, 236, 1043, 1729, 2807 |
| MunI | CAATTG | 2 cut(s) | 1281, 2220 |
| Mva1269I | GAATGC | 2 cut(s) | 2759, 2834 |
| MvaI | CCWGG | 9 cut(s) | 777, 894, 996, 1250, 1356, 1370, 1862, 2712, 3112 |
| MvnI | CGCG | 2 cut(s) | 65, 1436 |
| NciI | CCSGG | 4 cut(s) | 236, 237, 1729, 1730 |
| NcoI | CCATGG | 1 cut(s) | 243 |
| NheI | GCTAGC | 1 cut(s) | 1636 |
| NlaIV | GGNNCC | 7 cut(s) | 214, 241, 988, 1360, 1385, 2457, 3023 |
| NmeAIII | GCCGAG | 2 cut(s) | 431, 1387 |
| NmuCI | GTSAC | 5 cut(s) | 334, 625, 1587, 2053, 2524 |
| NsiI | ATGCAT | 2 cut(s) | 972, 2381 |
| NspI | RCATGY | 6 cut(s) | 335, 415, 866, 974, 2219, 2909 |
| PaeI | GCATGC | 1 cut(s) | 415 |
| PasI | CCCWGGG | 1 cut(s) | 1861 |
| PciI | ACATGT | 1 cut(s) | 2905 |
| PciSI | GCTCTTC | 1 cut(s) | 1659 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 399, 2829 |
| PctI | GAATGC | 2 cut(s) | 2759, 2834 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2257 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2123, 2869 |
| PfoI | TCCNGGA | 1 cut(s) | 2710 |
| PinAI | ACCGGT | 1 cut(s) | 2806 |
| Ple19I | CGATCG | 1 cut(s) | 2113 |
| PleI | GAGTC | 4 cut(s) | 126, 443, 852, 1338 |
| PpsI | GAGTC | 4 cut(s) | 126, 443, 852, 1338 |
| Ppu21I | YACGTR | 1 cut(s) | 2120 |
| PpuMI | RGGWCCY | 3 cut(s) | 213, 1366, 3159 |
| PscI | ACATGT | 1 cut(s) | 2905 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2598 |
| PshBI | ATTAAT | 1 cut(s) | 2610 |
| Psp124BI | GAGCTC | 1 cut(s) | 2447 |
| Psp1406I | AACGTT | 2 cut(s) | 287, 3080 |
| Psp5II | RGGWCCY | 3 cut(s) | 213, 1366, 3159 |
| Psp6I | CCWGG | 9 cut(s) | 775, 892, 994, 1248, 1354, 1368, 1860, 2710, 3110 |
| PspFI | CCCAGC | 3 cut(s) | 616, 990, 1505 |
| PspGI | CCWGG | 9 cut(s) | 775, 892, 994, 1248, 1354, 1368, 1860, 2710, 3110 |
| PspN4I | GGNNCC | 7 cut(s) | 214, 241, 988, 1360, 1385, 2457, 3023 |
| PspPI | GGNCC | 5 cut(s) | 213, 280, 517, 1366, 3159 |
| PspPPI | RGGWCCY | 3 cut(s) | 213, 1366, 3159 |
| PstI | CTGCAG | 2 cut(s) | 1159, 1426 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1154 |
| PsuI | RGATCY | 8 cut(s) | 121, 1183, 1675, 1855, 2290, 2455, 2641, 3021 |
| PvuI | CGATCG | 1 cut(s) | 2113 |
| PvuII | CAGCTG | 3 cut(s) | 1202, 2489, 3192 |
| RsaI | GTAC | 8 cut(s) | 31, 356, 1287, 1462, 2334, 2420, 2477, 2904 |
| RsaNI | GTAC | 8 cut(s) | 30, 355, 1286, 1461, 2333, 2419, 2476, 2903 |
| RseI | CAYNNNNRTG | 4 cut(s) | 269, 404, 416, 542 |
| SacI | GAGCTC | 1 cut(s) | 2447 |
| SacII | CCGCGG | 1 cut(s) | 1437 |
| SalI | GTCGAC | 1 cut(s) | 432 |
| SapI | GCTCTTC | 1 cut(s) | 1659 |
| Sau96I | GGNCC | 5 cut(s) | 213, 280, 517, 1366, 3159 |
| SchI | GAGTC | 4 cut(s) | 126, 443, 853, 1339 |
| SduI | GDGCHC | 6 cut(s) | 242, 991, 2164, 2275, 2447, 2817 |
| SexAI | ACCWGGT | 1 cut(s) | 1368 |
| SfaNI | GCATC | 7 cut(s) | 561, 603, 878, 913, 957, 2065, 2884 |
| SfcI | CTRYAG | 6 cut(s) | 82, 1155, 1422, 2024, 2165, 2262 |
| Sfr303I | CCGCGG | 1 cut(s) | 1437 |
| SgrBI | CCGCGG | 1 cut(s) | 1437 |
| SinI | GGWCC | 4 cut(s) | 213, 517, 1366, 3159 |
| SmaI | CCCGGG | 2 cut(s) | 237, 1730 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 269, 404, 416, 542 |
| SmlI | CTYRAG | 2 cut(s) | 495, 2276 |
| SmoI | CTYRAG | 2 cut(s) | 495, 2276 |
| SphI | GCATGC | 1 cut(s) | 415 |
| SrfI | GCCCGGGC | 1 cut(s) | 1730 |
| SspI | AATATT | 2 cut(s) | 531, 3007 |
| SspMI | CTAG | 6 cut(s) | 294, 1142, 1551, 1637, 1652, 2429 |
| SstI | GAGCTC | 1 cut(s) | 2447 |
| StyI | CCWWGG | 3 cut(s) | 243, 2343, 2428 |
| TaaI | ACNGT | 9 cut(s) | 731, 1216, 1267, 1395, 1474, 1521, 1587, 1690, 3049 |
| TaiI | ACGT | 7 cut(s) | 35, 290, 326, 1594, 2122, 2602, 3083 |
| TaqI | TCGA | 5 cut(s) | 47, 402, 433, 1171, 2241 |
| TatI | WGTACW | 5 cut(s) | 354, 2332, 2418, 2475, 2902 |
| TauI | GCSGC | 5 cut(s) | 251, 254, 382, 1436, 2946 |
| TscAI | CASTG | 5 cut(s) | 1270, 1332, 1695, 2182, 2455 |
| TseFI | GTSAC | 5 cut(s) | 334, 625, 1587, 2053, 2524 |
| TseI | GCWGC | 9 cut(s) | 421, 817, 866, 1421, 1751, 2486, 2489, 2737, 3189 |
| Tsp45I | GTSAC | 5 cut(s) | 334, 625, 1587, 2053, 2524 |
| TspGWI | ACGGA | 3 cut(s) | 856, 1448, 1952 |
| TspMI | CCCGGG | 2 cut(s) | 235, 1728 |
| TspRI | CASTG | 5 cut(s) | 1270, 1332, 1695, 2182, 2455 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2123, 2869 |
| VpaK11BI | GGWCC | 4 cut(s) | 213, 517, 1366, 3159 |
| VspI | ATTAAT | 1 cut(s) | 2610 |
| XapI | RAATTY | 5 cut(s) | 56, 477, 1481, 1772, 3093 |
| XceI | RCATGY | 6 cut(s) | 335, 415, 866, 974, 2219, 2909 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3123 |
| XmaI | CCCGGG | 2 cut(s) | 235, 1728 |
| XmaJI | CCTAGG | 1 cut(s) | 2428 |
| XmiI | GTMKAC | 4 cut(s) | 5, 102, 433, 2660 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2257 |
| XspI | CTAG | 6 cut(s) | 294, 1142, 1551, 1637, 1652, 2429 |
| Zsp2I | ATGCAT | 2 cut(s) | 972, 2381 |