Rh1BG329500

Clathrin is the major protein of the polyhedral coat of coated pits and vesicles

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0002740
Physical Location & Seq
Forward (+)
46405046 .. 46409257
4212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG329500.1

Sequence Viewer

Length: 2427 bp
ATGAGTTTGACTGTGTCTGTAGGGAAGCCATCTTTTACAAAGAAACAAGCAGATCTTTTCTTTCCTCCAGATTTCGCAGATGATTTCCCAGTTGCCATGCAGATGTCTCACAAGTACAGTTTGATTTATGTAATCACAAAGCTGGGGCTTCTATTTGTATACGACTTAGAGACAGCTAGTGCAGTTTACAGAAATAGAATTAGTCCAGATCCAATTTTCTTGACGACAGAAGCTTCATCAGTGGGAGGGTTTTATGCTGTTAATAGGCGGGGCCAGGTGTTGTTGGCTACCATTAATGAGCAAACAATTGTGCCTTTTGTCAGTGGTCAGTTAAACAATTTGGAGCTTGCCGTCAATCTGGCAAAAAGAGGAAATCTTCCTGGTGCTGAGAATCTGGTCGTCCAGCGTTTCCAAGAACTGTTTGCCCAAACCAAGTACAAAGAAGCTGCTGAACTGGCTGCTGAGTCCCCGCAAGGAATTCTTCGTACACCGGATACTGTTGCTAAATTTCAGAGTGTTCCTGTCCAAGCTGGGCAAACACCCCCTTTGTTGCAATACTTTGGGACACTCTTAACGAGAGGGAAGCTCAATGCCTTTGAGTCATTGGAATTGTCACGTCTTGTTGTGAACCAGAACAAGAAGAATCTTTTGGAAAACTGGTTGGCAGAGGACAAACTGGAATGCAGTGAGGAACTAGGAGATCTTGTGAAGACTGTGGATAATGATCTGGCTTTGAAAATATACATTAAAGCCAGAGCAACTCCAAAAGTTGTTGCAGCTTTTGCTGAGCGAAGGGAATTTGACAAAATCCTGATCTACTCAAAGCGGGTTGGCTACACACCTGACTATCTGTTCCTTCTGCAAACAATTCTCCGAGCAGACCCACAGGGTGCTGTTAATTTTGCATTGATGATGTCCCAAATGGAGGGTGGTTGTCCTGTTGATTACAACACCATTACAGATCTCTTTCTTCAGAGGAATCTGATTCGTGAGGCAACCGCTTTTCTACTGGATGTTTTGAAGCCAAATCTCCCTGAACACGCCTTCCTGCAGACAAAGGTCCTCGAGATTAACTTGGTTACTTTTCCAAATGTGGCTGATGCCATTTTAGCCAATGGTATGTTCAGTCATTATGATCGTCCTCGAATTGCCCAGTTATGTGAAAAAGCTGGTCTTTATGTGCGAGCTTTGCAACACTACTCTGAGTTGCCTGATATTAAGCGTGTCAGAGTGAATACACATGCAATAGAGCCGCAGTCACTAGTAGAGTTTTTTGGTACTTTGTCAAAGGAATGGGCATTGGAGTGTATGAAGGATCTCTTGCTGGTCAATTTGAGAGGCAACCTTCAGATAATTGTGCAGGTTGCTAAGGAGTACTCTGATCAGTTGGGTACCGATCAATGCATGAAGCTATTTGAGCAGTTCAAGTCATATGAAGGATTGTACTTCTTCCTCGGATCATTTTTGAGTTCAAGTGTGGATCCTGAAATCCACTTCAAGTACATTGAGGCAGCTGCCAAAACTGGACAAGTTAAAGAGGTCGAGAGAGTTACCAGAGAATCAAATTTCTATGATGCAGAGAAAACAAAGAACTTTTTAATGGAAGCTAAGCTCCCTGATGCACGTCCCCTTATCAATGTTTGCGACCGTTTTGGTTTTGTTCCAGATCTCACCCACTACTTGTACACAAACAATATGCTCCGTTACATTGAGGGTTACGTTCAAAAGGTGAATCCTTCAAATGCTCCTTTAGTTGTGGGACAGTTGCTAGATGACGAGTGCCCTGAAGATTTTATCAAAGGCTTGATCCTTTCTGTACGTTCATTGCTTCCAGTGGAGCCCCTTGTGGAGGAATGTGAGAAGAGGAATCGACTTCGTTTACTCTCTCAGTTCTTGGAGCATCTTGTGAGTGAGGGAAGCCAGGATGTGCACGTCCACAATGCGTTGGGTAAAATCATCATTGATAGTGGAAACAATCCTGAACACTTCCTTACCACAAACCCATATTATGATTCTCGTGTTGTGGGTAAATATTGTGAAAAACGTGATCCTACTCTGGCTGTTGTTGCTTATCGACGTGGACAATGCGATGATGAGCTTATCAATGTTACAAATAAAAACTCGTTGTTCAAATTACAAGCAAGATATGTGGTTGAGAGGATGGATGAGGATCTTTGGGCTAAAGTTCTTGACCCTGAGAATGAATTTAGAAGACAACTTATTGATCAAGTGGTTTCTACTGCCTTGCCCGAAAGTAAGAGCCCAGAACAAGTTTCTGCGGCTGTTAAGGCTTTCATGACTGCTGATTTGCCCCATGAATTAATTGAGCTCCTTGAAAAGATTGTGCTTCAAAACTCTGCCTTCAGTGGGAACTTCAAAACTCTGCCTTCAGTGGGAACTTTAATCTGCAGAATCTGCTCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04142 ko04144 ko04721 ko04961 ko05016 ko05100 map04142 map04144 map04721 map04961 map05016 map05100
Pfam Domains
Protein Families
Clathrin Clathrin-link Clathrin_H_link Clathrin_propel

Protein Analysis

808

Amino Acids

91.35

Weight (kDa)

5.57

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Clathrin-link PF09268 100 - 123 4.1e-09 Clathrin, heavy-chain linker
Clathrin_H_link PF13838 125 - 190 1.6e-28 Clathrin-H-link
Clathrin PF00637 313 - 448 1.6e-24 Region in Clathrin and VPS
Clathrin PF00637 457 - 597 4.6e-26 Region in Clathrin and VPS
Clathrin PF00637 606 - 740 2.9e-32 Region in Clathrin and VPS
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1351
Acc65I GGTACC 1 cut(s) 1391
AccB1I GGYRCC 1 cut(s) 1391
AccI GTMKAC 1 cut(s) 159
AciI CCGC 6 cut(s) 268, 470, 826, 999, 1253, 2279
AclWI GGATC 8 cut(s) 203, 1323, 1465, 1475, 1488, 1801, 2042, 2178
AcsI RAATTY 5 cut(s) 477, 506, 797, 1564, 2204
AcuI CTGAAG 5 cut(s) 956, 1331, 1806, 2347, 2373
AdeI CACNNNGTG 1 cut(s) 890
AfiI CCNNNNNNNGG 4 cut(s) 925, 1849, 2367, 2393
AhlI ACTAGT 1 cut(s) 1261
AjiI CACGTC 4 cut(s) 617, 1625, 1933, 2078
AjnI CCWGG 3 cut(s) 273, 379, 1920
AjuI GAANNNNNNNTTGG 4 cut(s) 632, 664, 1106, 1138
AloI GAACNNNNNNTCC 2 cut(s) 1029, 1061
Alw21I GWGCWC 2 cut(s) 1932, 2331
Alw26I GTCTC 2 cut(s) 111, 164
Alw44I GTGCAC 1 cut(s) 1928
AlwI GGATC 8 cut(s) 203, 1323, 1465, 1475, 1488, 1801, 2042, 2178
AlwNI CAGNNNCTG 1 cut(s) 2415
Ama87I CYCGRG 1 cut(s) 1064
AoxI GGCC 1 cut(s) 271
ApaLI GTGCAC 1 cut(s) 1928
ApeKI GCWGC 5 cut(s) 446, 458, 776, 1511, 1514
ApoI RAATTY 5 cut(s) 477, 506, 797, 1564, 2204
ArsI GACNNNNNNTTYG 2 cut(s) 2290, 2322
AseI ATTAAT 2 cut(s) 294, 2321
Asp718I GGTACC 1 cut(s) 1391
AspS9I GGNCC 2 cut(s) 271, 1060
AsuHPI GGTGA 2 cut(s) 1663, 1741
AvaI CYCGRG 1 cut(s) 1064
AvaII GGWCC 1 cut(s) 1060
BaeGI GKGCMC 2 cut(s) 1784, 1932
BamHI GGATCC 1 cut(s) 1480
BanI GGYRCC 1 cut(s) 1391
BanII GRGCYC 3 cut(s) 1842, 2264, 2331
BauI CACGAG 1 cut(s) 2016
BbsI GAAGAC 2 cut(s) 716, 2218
Bbv12I GWGCWC 2 cut(s) 1932, 2331
BbvI GCAGC 5 cut(s) 433, 445, 788, 1501, 1523
BccI CCATC 2 cut(s) 37, 2155
BceAI ACGGC 1 cut(s) 335
BciT130I CCWGG 3 cut(s) 275, 381, 1922
BciVI GTATCC 1 cut(s) 487
BclI TGATCA 2 cut(s) 1381, 2224
BcoDI GTCTC 2 cut(s) 111, 164
BcuI ACTAGT 1 cut(s) 1261
BfaI CTAG 4 cut(s) 177, 695, 1262, 1769
BfmI CTRYAG 3 cut(s) 18, 1049, 2407
BfuAI ACCTGC 1 cut(s) 1351
BfuI GTATCC 1 cut(s) 487
BglII AGATCT 4 cut(s) 52, 700, 961, 1666
BisI GCNGC 7 cut(s) 447, 459, 777, 1253, 1512, 1515, 2280
BlpI GCTNAGC 2 cut(s) 786, 1608
BlsI GCNGC 7 cut(s) 448, 460, 778, 1254, 1513, 1516, 2281
BmcAI AGTACT 1 cut(s) 1376
Bme1390I CCNGG 3 cut(s) 275, 381, 1922
Bme18I GGWCC 1 cut(s) 1060
BmeT110I CYCGRG 1 cut(s) 1064
BmgBI CACGTC 4 cut(s) 617, 1625, 1933, 2078
BmgT120I GGNCC 2 cut(s) 271, 1060
BmiI GGNNCC 4 cut(s) 272, 1393, 1482, 1839
BmrFI CCNGG 3 cut(s) 275, 381, 1922
BmrI ACTGGG 2 cut(s) 83, 1147
BmsI GCATC 4 cut(s) 1090, 1564, 1609, 1909
BmuI ACTGGG 2 cut(s) 83, 1147
BoxI GACNNNNGTC 1 cut(s) 1058
BpiI GAAGAC 2 cut(s) 716, 2218
BplI GAGNNNNNCTC 2 cut(s) 570, 602
BpmI CTGGAG 1 cut(s) 51
Bpu10I CCTNAGC 1 cut(s) 1368
Bpu1102I GCTNAGC 2 cut(s) 786, 1608
BsaBI GATNNNNATC 2 cut(s) 723, 2169
BsaJI CCNNGG 1 cut(s) 1453
BsaWI WCCGGW 1 cut(s) 490
BsaXI ACNNNNNCTCC 2 cut(s) 690, 720
Bsc4I CCNNNNNNNGG 4 cut(s) 925, 1849, 2367, 2393
Bse1I ACTGG 8 cut(s) 89, 459, 662, 681, 1014, 1153, 1528, 1832
Bse3DI GCAATG 1 cut(s) 1823
Bse8I GATNNNNATC 2 cut(s) 723, 2169
BseBI CCWGG 3 cut(s) 275, 381, 1922
BseDI CCNNGG 1 cut(s) 1453
BseGI GGATG 4 cut(s) 1018, 1930, 2166, 2170
BseJI GATNNNNATC 2 cut(s) 723, 2169
BseLI CCNNNNNNNGG 4 cut(s) 925, 1849, 2367, 2393
BseMI GCAATG 1 cut(s) 1823
BseMII CTCAG 6 cut(s) 378, 453, 777, 1194, 1901, 2187
BseNI ACTGG 8 cut(s) 89, 459, 662, 681, 1014, 1153, 1528, 1832
BseSI GKGCMC 2 cut(s) 1784, 1932
BseXI GCAGC 5 cut(s) 433, 445, 788, 1501, 1523
BseYI CCCAGC 2 cut(s) 142, 530
BsgI GTGCAG 2 cut(s) 201, 1379
Bsh1285I CGRYCG 1 cut(s) 1648
BshFI GGCC 1 cut(s) 273
BshNI GGYRCC 1 cut(s) 1391
BsiEI CGRYCG 1 cut(s) 1648
BsiHKAI GWGCWC 2 cut(s) 1932, 2331
BsiHKCI CYCGRG 1 cut(s) 1064
BsiSI CCGG 1 cut(s) 491
BslFI GGGAC 5 cut(s) 451, 577, 901, 1611, 1773
BslI CCNNNNNNNGG 4 cut(s) 925, 1849, 2367, 2393
BsmAI GTCTC 2 cut(s) 111, 164
BsmFI GGGAC 5 cut(s) 451, 577, 901, 1611, 1773
BsmI GAATGC 1 cut(s) 686
BsnI GGCC 1 cut(s) 273
BsoBI CYCGRG 1 cut(s) 1064
Bsp1286I GDGCHC 5 cut(s) 1784, 1842, 1932, 2264, 2331
Bsp1407I TGTACA 1 cut(s) 1683
Bsp1720I GCTNAGC 2 cut(s) 786, 1608
BspACI CCGC 6 cut(s) 268, 470, 826, 999, 1253, 2279
BspANI GGCC 1 cut(s) 273
BspCNI CTCAG 6 cut(s) 379, 454, 778, 1195, 1900, 2188
BspHI TCATGA 1 cut(s) 2295
BspLI GGNNCC 4 cut(s) 272, 1393, 1482, 1839
BspMAI CTGCAG 2 cut(s) 1053, 2411
BspMI ACCTGC 1 cut(s) 1351
BspPI GGATC 8 cut(s) 203, 1323, 1465, 1475, 1488, 1801, 2042, 2178
BspT107I GGYRCC 1 cut(s) 1391
BsrDI GCAATG 1 cut(s) 1823
BsrGI TGTACA 1 cut(s) 1683
BsrI ACTGG 8 cut(s) 89, 459, 662, 681, 1014, 1153, 1528, 1832
BssECI CCNNGG 1 cut(s) 1453
BssNAI GTATAC 1 cut(s) 160
BssSI CACGAG 1 cut(s) 2016
Bst1107I GTATAC 1 cut(s) 160
Bst2BI CACGAG 1 cut(s) 2016
Bst2UI CCWGG 3 cut(s) 275, 381, 1922
Bst4CI ACNGT 7 cut(s) 13, 119, 420, 499, 715, 1649, 1764
Bst6I CTCTTC 1 cut(s) 1856
BstAPI GCANNNNNTGC 2 cut(s) 782, 2415
BstAUI TGTACA 1 cut(s) 1683
BstC8I GCNNGC 2 cut(s) 348, 1185
BstDEI CTNAG 9 cut(s) 166, 387, 462, 786, 1203, 1368, 1608, 1887, 2196
BstENI CCTNNNNNAGG 1 cut(s) 1847
BstF5I GGATG 4 cut(s) 1018, 1930, 2166, 2170
BstMAI GTCTC 2 cut(s) 111, 164
BstMCI CGRYCG 1 cut(s) 1648
BstMWI GCNNNNNNNGC 8 cut(s) 455, 782, 1109, 1189, 1417, 2066, 2288, 2415
BstNI CCWGG 3 cut(s) 275, 381, 1922
BstNSI RCATGY 1 cut(s) 1244
BstPAI GACNNNNGTC 1 cut(s) 1058
BstSCI CCNGG 3 cut(s) 273, 379, 1920
BstSFI CTRYAG 3 cut(s) 18, 1049, 2407
BstSLI GKGCMC 2 cut(s) 1784, 1932
BstV1I GCAGC 5 cut(s) 433, 445, 788, 1501, 1523
BstV2I GAAGAC 2 cut(s) 716, 2218
BstX2I RGATCY 8 cut(s) 52, 208, 700, 961, 1315, 1480, 1666, 2170
BstYI RGATCY 8 cut(s) 52, 208, 700, 961, 1315, 1480, 1666, 2170
BstZ17I GTATAC 1 cut(s) 160
BsuI GTATCC 1 cut(s) 487
BsuRI GGCC 1 cut(s) 273
BtgZI GCGATG 1 cut(s) 2103
BtrI CACGTC 4 cut(s) 617, 1625, 1933, 2078
BtsCI GGATG 4 cut(s) 1018, 1930, 2166, 2170
BtsI GCAGTG 1 cut(s) 691
BtsIMutI CAGTG 6 cut(s) 246, 328, 691, 1839, 2371, 2397
BveI ACCTGC 1 cut(s) 1351
Cac8I GCNNGC 2 cut(s) 348, 1185
CaiI CAGNNNCTG 1 cut(s) 2415
CciI TCATGA 1 cut(s) 2295
Cfr13I GGNCC 2 cut(s) 271, 1060
CspCI CAANNNNNGTGG 2 cut(s) 2130, 2165
CviAII CATG 5 cut(s) 97, 1241, 1405, 2296, 2315
DdeI CTNAG 9 cut(s) 166, 387, 462, 786, 1203, 1368, 1608, 1887, 2196
DraIII CACNNNGTG 1 cut(s) 890
Eam1104I CTCTTC 1 cut(s) 1856
EarI CTCTTC 1 cut(s) 1856
Ecl136II GAGCTC 1 cut(s) 2329
Eco24I GRGCYC 3 cut(s) 1842, 2264, 2331
Eco47I GGWCC 1 cut(s) 1060
Eco53kI GAGCTC 1 cut(s) 2329
Eco57I CTGAAG 5 cut(s) 956, 1331, 1806, 2347, 2373
Eco88I CYCGRG 1 cut(s) 1064
EcoICRI GAGCTC 1 cut(s) 2329
EcoNI CCTNNNNNAGG 1 cut(s) 1847
EcoO109I RGGNCCY 1 cut(s) 1060
EcoRI GAATTC 1 cut(s) 477
EcoRII CCWGG 3 cut(s) 273, 379, 1920
EcoT22I ATGCAT 1 cut(s) 1406
EcoT38I GRGCYC 3 cut(s) 1842, 2264, 2331
FaeI CATG 5 cut(s) 100, 1244, 1408, 2299, 2318
FalI AAGNNNNNCTT 8 cut(s) 39, 71, 465, 497, 1158, 1190, 1304, 1336
FaqI GGGAC 5 cut(s) 451, 577, 901, 1611, 1773
FatI CATG 5 cut(s) 96, 1240, 1404, 2295, 2314
FauI CCCGC 3 cut(s) 261, 477, 819
FauNDI CATATG 1 cut(s) 1432
FbaI TGATCA 2 cut(s) 1381, 2224
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 7 cut(s) 447, 459, 777, 1253, 1512, 1515, 2280
FokI GGATG 4 cut(s) 1025, 1937, 2173, 2177
FriOI GRGCYC 3 cut(s) 1842, 2264, 2331
Fsp4HI GCNGC 7 cut(s) 447, 459, 777, 1253, 1512, 1515, 2280
FspBI CTAG 4 cut(s) 177, 695, 1262, 1769
GluI GCNGC 7 cut(s) 447, 459, 777, 1253, 1512, 1515, 2280
GsaI CCCAGC 2 cut(s) 146, 534
GsuI CTGGAG 1 cut(s) 51
HaeIII GGCC 1 cut(s) 273
HapII CCGG 1 cut(s) 491
Hin1II CATG 5 cut(s) 100, 1244, 1408, 2299, 2318
HindIII AAGCTT 1 cut(s) 231
HpaII CCGG 1 cut(s) 491
HphI GGTGA 2 cut(s) 1663, 1741
Hpy166II GTNNAC 9 cut(s) 160, 187, 488, 628, 1686, 1880, 1930, 1936, 2081
Hpy188I TCNGA 9 cut(s) 513, 875, 975, 984, 1204, 1229, 1350, 1381, 1457
Hpy8I GTNNAC 9 cut(s) 160, 187, 488, 628, 1686, 1880, 1930, 1936, 2081
Hpy99I CGWCG 1 cut(s) 2079
HpyAV CCTTC 9 cut(s) 786, 866, 1054, 1306, 1355, 1430, 1746, 2371, 2397
HpyCH4III ACNGT 7 cut(s) 13, 119, 420, 499, 715, 1649, 1764
HpyCH4IV ACGT 7 cut(s) 616, 1624, 1719, 1819, 1932, 2044, 2077
HpyF10VI GCNNNNNNNGC 8 cut(s) 455, 782, 1109, 1189, 1417, 2066, 2288, 2415
HpyF3I CTNAG 9 cut(s) 166, 387, 462, 786, 1203, 1368, 1608, 1887, 2196
HpySE526I ACGT 7 cut(s) 616, 1624, 1719, 1819, 1932, 2044, 2077
Hsp92II CATG 5 cut(s) 100, 1244, 1408, 2299, 2318
KpnI GGTACC 1 cut(s) 1395
Ksp22I TGATCA 2 cut(s) 1381, 2224
LmnI GCTCC 7 cut(s) 343, 1617, 1704, 1750, 1837, 1897, 2334
Lsp1109I GCAGC 5 cut(s) 433, 445, 788, 1501, 1523
LweI GCATC 4 cut(s) 1090, 1564, 1609, 1909
MaeI CTAG 4 cut(s) 177, 695, 1262, 1769
MaeII ACGT 7 cut(s) 616, 1624, 1719, 1819, 1932, 2044, 2077
MaeIII GTNAC 7 cut(s) 612, 1078, 1257, 1549, 1703, 1715, 2107
MboII GAAGA 9 cut(s) 368, 473, 652, 721, 962, 1441, 1799, 1873, 2223
MfeI CAATTG 1 cut(s) 306
MflI RGATCY 8 cut(s) 52, 208, 700, 961, 1315, 1480, 1666, 2170
MhlI GDGCHC 5 cut(s) 1784, 1842, 1932, 2264, 2331
MlyI GAGTC 2 cut(s) 473, 608
Mph1103I ATGCAT 1 cut(s) 1406
MslI CAYNNNNRTG 2 cut(s) 101, 1303
MspA1I CMGCKG 1 cut(s) 1514
MspI CCGG 1 cut(s) 491
MspR9I CCNGG 3 cut(s) 275, 381, 1922
MunI CAATTG 1 cut(s) 306
Mva1269I GAATGC 1 cut(s) 686
MvaI CCWGG 3 cut(s) 275, 381, 1922
MwoI GCNNNNNNNGC 8 cut(s) 455, 782, 1109, 1189, 1417, 2066, 2288, 2415
NdeI CATATG 1 cut(s) 1432
NlaIII CATG 5 cut(s) 100, 1244, 1408, 2299, 2318
NlaIV GGNNCC 4 cut(s) 272, 1393, 1482, 1839
NmuCI GTSAC 2 cut(s) 612, 1257
NsiI ATGCAT 1 cut(s) 1406
NspI RCATGY 1 cut(s) 1244
PaeR7I CTCGAG 1 cut(s) 1064
PagI TCATGA 1 cut(s) 2295
PctI GAATGC 1 cut(s) 686
PfeI GAWTC 9 cut(s) 391, 643, 979, 985, 1559, 1732, 1867, 2012, 2412
PflFI GACNNNGTC 1 cut(s) 13
PkrI GCNGC 7 cut(s) 448, 460, 778, 1254, 1513, 1516, 2281
PleI GAGTC 2 cut(s) 472, 607
PpsI GAGTC 2 cut(s) 472, 607
PpuMI RGGWCCY 1 cut(s) 1060
PshAI GACNNNNGTC 1 cut(s) 1058
PshBI ATTAAT 2 cut(s) 294, 2321
Psp124BI GAGCTC 1 cut(s) 2331
Psp5II RGGWCCY 1 cut(s) 1060
Psp6I CCWGG 3 cut(s) 273, 379, 1920
PspFI CCCAGC 2 cut(s) 142, 530
PspGI CCWGG 3 cut(s) 273, 379, 1920
PspN4I GGNNCC 4 cut(s) 272, 1393, 1482, 1839
PspPI GGNCC 2 cut(s) 271, 1060
PspPPI RGGWCCY 1 cut(s) 1060
PstI CTGCAG 2 cut(s) 1053, 2411
PstNI CAGNNNCTG 1 cut(s) 2415
PsuI RGATCY 8 cut(s) 52, 208, 700, 961, 1315, 1480, 1666, 2170
PsyI GACNNNGTC 1 cut(s) 13
PvuII CAGCTG 1 cut(s) 1514
RseI CAYNNNNRTG 2 cut(s) 101, 1303
SacI GAGCTC 1 cut(s) 2331
SatI GCNGC 7 cut(s) 447, 459, 777, 1253, 1512, 1515, 2280
Sau96I GGNCC 2 cut(s) 271, 1060
ScaI AGTACT 1 cut(s) 1376
SchI GAGTC 2 cut(s) 473, 608
ScrFI CCNGG 3 cut(s) 275, 381, 1922
SduI GDGCHC 5 cut(s) 1784, 1842, 1932, 2264, 2331
SfaNI GCATC 4 cut(s) 1090, 1564, 1609, 1909
SfcI CTRYAG 3 cut(s) 18, 1049, 2407
Sfr274I CTCGAG 1 cut(s) 1064
SinI GGWCC 1 cut(s) 1060
SlaI CTCGAG 1 cut(s) 1064
SmiMI CAYNNNNRTG 2 cut(s) 101, 1303
SmlI CTYRAG 1 cut(s) 1064
SmoI CTYRAG 1 cut(s) 1064
SpeI ACTAGT 1 cut(s) 1261
SsiI CCGC 6 cut(s) 268, 470, 826, 999, 1253, 2279
SspI AATATT 1 cut(s) 2033
SspMI CTAG 4 cut(s) 177, 695, 1262, 1769
SstI GAGCTC 1 cut(s) 2331
StyD4I CCNGG 3 cut(s) 273, 379, 1920
TaaI ACNGT 7 cut(s) 13, 119, 420, 499, 715, 1649, 1764
TaiI ACGT 7 cut(s) 619, 1627, 1722, 1822, 1935, 2047, 2080
TaqI TCGA 5 cut(s) 1065, 1144, 1542, 1870, 2074
TatI WGTACW 6 cut(s) 114, 435, 1374, 1443, 1500, 1683
TauI GCSGC 2 cut(s) 1255, 2282
TfiI GAWTC 9 cut(s) 391, 643, 979, 985, 1559, 1732, 1867, 2012, 2412
TscAI CASTG 6 cut(s) 246, 328, 691, 1839, 2371, 2397
TseFI GTSAC 2 cut(s) 612, 1257
TseI GCWGC 5 cut(s) 446, 458, 776, 1511, 1514
Tsp45I GTSAC 2 cut(s) 612, 1257
TspDTI ATGAA 8 cut(s) 225, 1325, 1421, 1449, 1812, 2217, 2284, 2331
TspGWI ACGGA 1 cut(s) 1691
TspRI CASTG 6 cut(s) 246, 328, 691, 1839, 2371, 2397
Tth111I GACNNNGTC 1 cut(s) 13
VneI GTGCAC 1 cut(s) 1928
VpaK11BI GGWCC 1 cut(s) 1060
VspI ATTAAT 2 cut(s) 294, 2321
XagI CCTNNNNNAGG 1 cut(s) 1847
XapI RAATTY 5 cut(s) 477, 506, 797, 1564, 2204
XceI RCATGY 1 cut(s) 1244
XcmI CCANNNNNNNNNTGG 1 cut(s) 926
XhoI CTCGAG 1 cut(s) 1064
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 4 cut(s) 177, 695, 1262, 1769
ZrmI AGTACT 1 cut(s) 1376
Zsp2I ATGCAT 1 cut(s) 1406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.