Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08530 AT3G11130 |
| fragaria_vesca | FvH4_3g39020 FvH4_7g24660 FvH4_7g24660 |
| malus_domestica | MD01G1154700.v1.1 MD03G1065300.v1.1 MD07G1223800.v1.1 MD11G1070100.v1.1 |
| prunus_persica | Prupe.2G252300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 |
| pyrus_communis | pycom01g17210 pycom03g05230 pycom07g20230 pycom07g20240 pycom11g05860 |
| rosa_chinensis | RchiOBHm_Chr1g0370491 RchiOBHm_Chr5g0070331 |
| rosa_laevigata | RLG00000027035 RLG00000036125 |
| rosa_multiflora | Rmu_sc0002558.1_g000009 Rmu_sc0007961.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00010850 Rroxscaffold_4G00286510 |
| rosa_rugosa | Rorug01G0357300 Rorug05G0404900 |
| rosa_samantha | Rh1AG365800 Rh1BG329500 Rh1CG341800 Rh1CG343600 Rh5AG460600 Rh5BG478900 Rh5CG503100 Rh5DG490800 |
| rosa_wichuraiana | Rw1G032230 Rw5G042930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1328 |
| Acc36I | ACCTGC | 2 cut(s) | 526, 1747 |
| Acc65I | GGTACC | 1 cut(s) | 3708 |
| AccB1I | GGYRCC | 4 cut(s) | 194, 941, 3708, 3959 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3655, 5270 |
| AccBSI | CCGCTC | 2 cut(s) | 646, 4158 |
| AccI | GTMKAC | 4 cut(s) | 32, 388, 3750, 4533 |
| AccII | CGCG | 1 cut(s) | 2952 |
| AcoI | YGGCCR | 4 cut(s) | 201, 2040, 3576, 4976 |
| AcsI | RAATTY | 8 cut(s) | 432, 1436, 1727, 2497, 3052, 3286, 3806, 4037 |
| AcuI | CTGAAG | 7 cut(s) | 1179, 1886, 1964, 1970, 2261, 2739, 4512 |
| AdeI | CACNNNGTG | 1 cut(s) | 4529 |
| AfaI | GTAC | 9 cut(s) | 311, 1242, 1417, 2289, 2375, 2435, 2862, 3710, 5060 |
| AflIII | ACRYGT | 3 cut(s) | 2152, 2863, 4768 |
| AgeI | ACCGGT | 1 cut(s) | 2764 |
| AjiI | CACGTC | 2 cut(s) | 2558, 4769 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2036, 2068, 3482, 3514 |
| AleI | CACNNNNGTG | 2 cut(s) | 3935, 4544 |
| Alw21I | GWGCWC | 5 cut(s) | 2402, 3033, 4140, 4180, 4470 |
| Alw26I | GTCTC | 8 cut(s) | 21, 320, 1094, 1851, 4151, 4274, 4759, 4853 |
| Alw44I | GTGCAC | 2 cut(s) | 4176, 4466 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1109, 2701, 3322, 5176 |
| Ama87I | CYCGRG | 2 cut(s) | 1683, 4991 |
| ApaI | GGGCCC | 1 cut(s) | 5291 |
| ApaLI | GTGCAC | 2 cut(s) | 4176, 4466 |
| ApoI | RAATTY | 8 cut(s) | 432, 1436, 1727, 2497, 3052, 3286, 3806, 4037 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 640, 672, 1975, 2007 |
| AseI | ATTAAT | 3 cut(s) | 2568, 3036, 4500 |
| AsiGI | ACCGGT | 1 cut(s) | 2764 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1132, 2212, 3810 |
| Asp718I | GGTACC | 1 cut(s) | 3708 |
| AspA2I | CCTAGG | 1 cut(s) | 2383 |
| AspLEI | GCGC | 1 cut(s) | 2390 |
| AsuC2I | CCSGG | 2 cut(s) | 3545, 5199 |
| AsuHPI | GGTGA | 7 cut(s) | 324, 629, 1879, 2596, 3806, 4889, 5125 |
| AsuNHI | GCTAGC | 1 cut(s) | 1591 |
| AvaI | CYCGRG | 2 cut(s) | 1683, 4991 |
| AvaII | GGWCC | 6 cut(s) | 168, 472, 1321, 3118, 3398, 4402 |
| AvrII | CCTAGG | 1 cut(s) | 2383 |
| AxyI | CCTNAGG | 1 cut(s) | 2184 |
| BaeGI | GKGCMC | 5 cut(s) | 946, 2119, 4180, 4470, 5291 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1224, 1257 |
| BalI | TGGCCA | 2 cut(s) | 2042, 3578 |
| BamHI | GGATCC | 1 cut(s) | 2980 |
| BanI | GGYRCC | 4 cut(s) | 194, 941, 3708, 3959 |
| BanII | GRGCYC | 6 cut(s) | 2230, 2402, 2775, 3033, 4140, 5291 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3696, 3728 |
| BauI | CACGAG | 1 cut(s) | 3248 |
| BbsI | GAAGAC | 4 cut(s) | 1646, 2798, 3737, 4674 |
| Bbv12I | GWGCWC | 5 cut(s) | 2402, 3033, 4140, 4180, 4470 |
| BbvCI | CCTCAGC | 2 cut(s) | 1317, 4032 |
| BccI | CCATC | 9 cut(s) | 967, 1892, 3347, 3361, 3389, 3623, 3712, 4797, 5239 |
| BceAI | ACGGC | 2 cut(s) | 364, 3947 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5033, 5067 |
| BclI | TGATCA | 3 cut(s) | 3157, 4714, 4879 |
| BcnI | CCSGG | 2 cut(s) | 3545, 5199 |
| BcoDI | GTCTC | 8 cut(s) | 21, 320, 1094, 1851, 4151, 4274, 4759, 4853 |
| BfaI | CTAG | 8 cut(s) | 249, 572, 1097, 1592, 1607, 2384, 3923, 4163 |
| BfuAI | ACCTGC | 2 cut(s) | 526, 1747 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 407 |
| BglII | AGATCT | 3 cut(s) | 1630, 2245, 2599 |
| BlnI | CCTAGG | 1 cut(s) | 2383 |
| BlpI | GCTNAGC | 2 cut(s) | 4045, 5151 |
| Bme18I | GGWCC | 6 cut(s) | 168, 472, 1321, 3118, 3398, 4402 |
| BmeT110I | CYCGRG | 2 cut(s) | 1683, 4991 |
| BmgBI | CACGTC | 2 cut(s) | 2558, 4769 |
| BmrI | ACTGGG | 1 cut(s) | 3922 |
| BmtI | GCTAGC | 1 cut(s) | 1595 |
| BmuI | ACTGGG | 1 cut(s) | 3922 |
| BpiI | GAAGAC | 4 cut(s) | 1646, 2798, 3737, 4674 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4850, 4882 |
| BpmI | CTGGAG | 4 cut(s) | 981, 2386, 3053, 4778 |
| Bpu10I | CCTNAGC | 7 cut(s) | 531, 1317, 1965, 2913, 3114, 3198, 4032 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 4045, 5151 |
| BpuEI | CTTGAG | 3 cut(s) | 435, 2252, 4760 |
| BpuMI | CCSGG | 2 cut(s) | 3545, 5199 |
| Bsa29I | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| BsaAI | YACGTR | 1 cut(s) | 3668 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3690 |
| BsaJI | CCNNGG | 9 cut(s) | 190, 198, 457, 848, 1815, 1816, 2383, 3579, 3735 |
| BsaWI | WCCGGW | 1 cut(s) | 2764 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 34, 1620, 1650, 5022, 5052 |
| Bse118I | RCCGGY | 1 cut(s) | 2764 |
| Bse1I | ACTGG | 5 cut(s) | 1019, 2461, 2706, 3917, 4319 |
| Bse21I | CCTNAGG | 1 cut(s) | 2184 |
| Bse3DI | GCAATG | 2 cut(s) | 3023, 4815 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3690 |
| BseCI | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| BseDI | CCNNGG | 9 cut(s) | 190, 198, 457, 848, 1815, 1816, 2383, 3579, 3735 |
| BseJI | GATNNNNATC | 1 cut(s) | 3690 |
| BseMI | GCAATG | 2 cut(s) | 3023, 4815 |
| BseNI | ACTGG | 5 cut(s) | 1019, 2461, 2706, 3917, 4319 |
| BseRI | GAGGAG | 4 cut(s) | 9, 12, 4676, 5147 |
| BseSI | GKGCMC | 5 cut(s) | 946, 2119, 4180, 4470, 5291 |
| BseYI | CCCAGC | 1 cut(s) | 945 |
| BsgI | GTGCAG | 2 cut(s) | 3654, 5175 |
| Bsh1236I | CGCG | 1 cut(s) | 2952 |
| BshNI | GGYRCC | 4 cut(s) | 194, 941, 3708, 3959 |
| BshTI | ACCGGT | 1 cut(s) | 2764 |
| BshVI | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| BsiHKAI | GWGCWC | 5 cut(s) | 2402, 3033, 4140, 4180, 4470 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1683, 4991 |
| BsiSI | CCGG | 4 cut(s) | 2765, 3544, 4975, 5198 |
| BslFI | GGGAC | 1 cut(s) | 4415 |
| BsmAI | GTCTC | 8 cut(s) | 21, 320, 1094, 1851, 4151, 4274, 4759, 4853 |
| BsmBI | CGTCTC | 3 cut(s) | 21, 4274, 4759 |
| BsmFI | GGGAC | 1 cut(s) | 4415 |
| BsmI | GAATGC | 3 cut(s) | 3539, 3899, 5280 |
| BsoBI | CYCGRG | 2 cut(s) | 1683, 4991 |
| Bsp120I | GGGCCC | 1 cut(s) | 5287 |
| Bsp1407I | TGTACA | 2 cut(s) | 2287, 2860 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 4045, 5151 |
| Bsp19I | CCATGG | 1 cut(s) | 198 |
| BspDI | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| BspFNI | CGCG | 1 cut(s) | 2952 |
| BspHI | TCATGA | 2 cut(s) | 3694, 4882 |
| BspMAI | CTGCAG | 5 cut(s) | 1114, 1381, 3238, 3318, 5046 |
| BspMI | ACCTGC | 2 cut(s) | 526, 1747 |
| BspOI | GCTAGC | 1 cut(s) | 1595 |
| BspQI | GCTCTTC | 1 cut(s) | 1614 |
| BspT107I | GGYRCC | 4 cut(s) | 194, 941, 3708, 3959 |
| BsrBI | CCGCTC | 2 cut(s) | 646, 4158 |
| BsrDI | GCAATG | 2 cut(s) | 3023, 4815 |
| BsrFI | RCCGGY | 1 cut(s) | 2764 |
| BsrGI | TGTACA | 2 cut(s) | 2287, 2860 |
| BsrI | ACTGG | 5 cut(s) | 1019, 2461, 2706, 3917, 4319 |
| BssAI | RCCGGY | 1 cut(s) | 2764 |
| BssECI | CCNNGG | 9 cut(s) | 190, 198, 457, 848, 1815, 1816, 2383, 3579, 3735 |
| BssNAI | GTATAC | 1 cut(s) | 33 |
| BssSI | CACGAG | 1 cut(s) | 3248 |
| BssT1I | CCWWGG | 5 cut(s) | 198, 457, 2383, 3579, 3735 |
| Bst1107I | GTATAC | 1 cut(s) | 33 |
| Bst2BI | CACGAG | 1 cut(s) | 3248 |
| Bst6I | CTCTTC | 4 cut(s) | 30, 1614, 2763, 4089 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 382, 821, 830, 1385, 1712, 3641 |
| BstAUI | TGTACA | 2 cut(s) | 2287, 2860 |
| BstBAI | YACGTR | 1 cut(s) | 3668 |
| BstDSI | CCRYGG | 1 cut(s) | 198 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2780 |
| BstFNI | CGCG | 1 cut(s) | 2952 |
| BstHHI | GCGC | 1 cut(s) | 2390 |
| BstMAI | GTCTC | 8 cut(s) | 21, 320, 1094, 1851, 4151, 4274, 4759, 4853 |
| BstSLI | GKGCMC | 5 cut(s) | 946, 2119, 4180, 4470, 5291 |
| BstUI | CGCG | 1 cut(s) | 2952 |
| BstV2I | GAAGAC | 4 cut(s) | 1646, 2798, 3737, 4674 |
| BstX2I | RGATCY | 8 cut(s) | 51, 1138, 1630, 1810, 2245, 2599, 2980, 3167 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 3364, 3845, 4398, 4549 |
| BstYI | RGATCY | 8 cut(s) | 51, 1138, 1630, 1810, 2245, 2599, 2980, 3167 |
| BstZ17I | GTATAC | 1 cut(s) | 33 |
| Bsu15I | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2184 |
| BsuTUI | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| BtgI | CCRYGG | 1 cut(s) | 198 |
| BtgZI | GCGATG | 1 cut(s) | 4314 |
| BtrI | CACGTC | 2 cut(s) | 2558, 4769 |
| BtsI | GCAGTG | 1 cut(s) | 1287 |
| BtsIMutI | CAGTG | 5 cut(s) | 1287, 1650, 2130, 3760, 4312 |
| BveI | ACCTGC | 2 cut(s) | 526, 1747 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1109, 2701, 3322, 5176 |
| CciI | TCATGA | 2 cut(s) | 3694, 4882 |
| CfoI | GCGC | 1 cut(s) | 2390 |
| Cfr10I | RCCGGY | 1 cut(s) | 2764 |
| ClaI | ATCGAT | 3 cut(s) | 357, 2068, 2413 |
| CseI | GACGC | 2 cut(s) | 334, 374 |
| CsiI | ACCWGGT | 1 cut(s) | 1323 |
| Csp6I | GTAC | 9 cut(s) | 310, 1241, 1416, 2288, 2374, 2434, 2861, 3709, 5059 |
| CspAI | ACCGGT | 1 cut(s) | 2764 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1461, 1496, 3234, 3269 |
| CviQI | GTAC | 9 cut(s) | 310, 1241, 1416, 2288, 2374, 2434, 2861, 3709, 5059 |
| DraI | TTTAAA | 1 cut(s) | 841 |
| DraIII | CACNNNGTG | 1 cut(s) | 4529 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1328 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1328 |
| EaeI | YGGCCR | 4 cut(s) | 201, 2040, 3576, 4976 |
| Eam1104I | CTCTTC | 4 cut(s) | 30, 1614, 2763, 4089 |
| EarI | CTCTTC | 4 cut(s) | 30, 1614, 2763, 4089 |
| EciI | GGCGGA | 1 cut(s) | 4568 |
| Ecl136II | GAGCTC | 3 cut(s) | 2400, 3031, 4138 |
| Eco130I | CCWWGG | 5 cut(s) | 198, 457, 2383, 3579, 3735 |
| Eco24I | GRGCYC | 6 cut(s) | 2230, 2402, 2775, 3033, 4140, 5291 |
| Eco32I | GATATC | 2 cut(s) | 1035, 2146 |
| Eco47I | GGWCC | 6 cut(s) | 168, 472, 1321, 3118, 3398, 4402 |
| Eco53kI | GAGCTC | 3 cut(s) | 2400, 3031, 4138 |
| Eco57I | CTGAAG | 7 cut(s) | 1179, 1886, 1964, 1970, 2261, 2739, 4512 |
| Eco81I | CCTNAGG | 1 cut(s) | 2184 |
| Eco88I | CYCGRG | 2 cut(s) | 1683, 4991 |
| EcoICRI | GAGCTC | 3 cut(s) | 2400, 3031, 4138 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2780 |
| EcoO109I | RGGNCCY | 6 cut(s) | 168, 235, 1321, 3118, 3868, 5288 |
| EcoRI | GAATTC | 3 cut(s) | 432, 3806, 4037 |
| EcoRV | GATATC | 2 cut(s) | 1035, 2146 |
| EcoT14I | CCWWGG | 5 cut(s) | 198, 457, 2383, 3579, 3735 |
| EcoT22I | ATGCAT | 2 cut(s) | 927, 3772 |
| EcoT38I | GRGCYC | 6 cut(s) | 2230, 2402, 2775, 3033, 4140, 5291 |
| ErhI | CCWWGG | 5 cut(s) | 198, 457, 2383, 3579, 3735 |
| Esp3I | CGTCTC | 3 cut(s) | 21, 4274, 4759 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2529, 2561 |
| FaqI | GGGAC | 1 cut(s) | 4415 |
| FauI | CCCGC | 5 cut(s) | 1453, 1797, 3409, 4151, 4789 |
| FauNDI | CATATG | 2 cut(s) | 3772, 4182 |
| FbaI | TGATCA | 3 cut(s) | 3157, 4714, 4879 |
| FblI | GTMKAC | 4 cut(s) | 32, 388, 3750, 4533 |
| FriOI | GRGCYC | 6 cut(s) | 2230, 2402, 2775, 3033, 4140, 5291 |
| FspBI | CTAG | 8 cut(s) | 249, 572, 1097, 1592, 1607, 2384, 3923, 4163 |
| GlaI | GCGC | 1 cut(s) | 2389 |
| GsaI | CCCAGC | 1 cut(s) | 949 |
| GsuI | CTGGAG | 4 cut(s) | 981, 2386, 3053, 4778 |
| HapII | CCGG | 4 cut(s) | 2765, 3544, 4975, 5198 |
| HgaI | GACGC | 2 cut(s) | 334, 374 |
| HhaI | GCGC | 1 cut(s) | 2390 |
| Hin6I | GCGC | 1 cut(s) | 2388 |
| HinP1I | GCGC | 1 cut(s) | 2388 |
| HincII | GTYRAC | 4 cut(s) | 389, 2084, 3751, 4534 |
| HindII | GTYRAC | 4 cut(s) | 389, 2084, 3751, 4534 |
| HindIII | AAGCTT | 7 cut(s) | 132, 1070, 1161, 2543, 4235, 4283, 4736 |
| HpaII | CCGG | 4 cut(s) | 2765, 3544, 4975, 5198 |
| HphI | GGTGA | 7 cut(s) | 324, 629, 1879, 2596, 3806, 4889, 5125 |
| Hpy99I | CGWCG | 2 cut(s) | 350, 390 |
| HpyCH4IV | ACGT | 8 cut(s) | 14, 242, 278, 1546, 2152, 2557, 3667, 4768 |
| HpySE526I | ACGT | 8 cut(s) | 14, 242, 278, 1546, 2152, 2557, 3667, 4768 |
| HspAI | GCGC | 1 cut(s) | 2388 |
| KpnI | GGTACC | 1 cut(s) | 3712 |
| Ksp22I | TGATCA | 3 cut(s) | 3157, 4714, 4879 |
| LguI | GCTCTTC | 1 cut(s) | 1614 |
| LmnI | GCTCC | 9 cut(s) | 733, 2405, 2476, 2683, 2830, 3567, 3739, 4171, 5221 |
| MabI | ACCWGGT | 1 cut(s) | 1323 |
| MaeI | CTAG | 8 cut(s) | 249, 572, 1097, 1592, 1607, 2384, 3923, 4163 |
| MaeII | ACGT | 8 cut(s) | 14, 242, 278, 1546, 2152, 2557, 3667, 4768 |
| MbiI | CCGCTC | 2 cut(s) | 646, 4158 |
| MfeI | CAATTG | 4 cut(s) | 1236, 2175, 3431, 3587 |
| MflI | RGATCY | 8 cut(s) | 51, 1138, 1630, 1810, 2245, 2599, 2980, 3167 |
| MlsI | TGGCCA | 2 cut(s) | 2042, 3578 |
| MluNI | TGGCCA | 2 cut(s) | 2042, 3578 |
| MlyI | GAGTC | 4 cut(s) | 398, 1294, 3202, 3369 |
| MmeI | TCCRAC | 6 cut(s) | 1741, 1920, 3145, 3388, 3480, 4149 |
| Mox20I | TGGCCA | 2 cut(s) | 2042, 3578 |
| Mph1103I | ATGCAT | 2 cut(s) | 927, 3772 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1132, 2212, 3810 |
| MscI | TGGCCA | 2 cut(s) | 2042, 3578 |
| MslI | CAYNNNNRTG | 8 cut(s) | 224, 359, 371, 497, 3815, 3935, 4079, 4544 |
| Msp20I | TGGCCA | 2 cut(s) | 2042, 3578 |
| MspA1I | CMGCKG | 3 cut(s) | 1157, 1336, 2447 |
| MspI | CCGG | 4 cut(s) | 2765, 3544, 4975, 5198 |
| MunI | CAATTG | 4 cut(s) | 1236, 2175, 3431, 3587 |
| Mva1269I | GAATGC | 3 cut(s) | 3539, 3899, 5280 |
| MvnI | CGCG | 1 cut(s) | 2952 |
| NciI | CCSGG | 2 cut(s) | 3545, 5199 |
| NcoI | CCATGG | 1 cut(s) | 198 |
| NdeI | CATATG | 2 cut(s) | 3772, 4182 |
| NheI | GCTAGC | 1 cut(s) | 1591 |
| NmeAIII | GCCGAG | 1 cut(s) | 386 |
| NmuCI | GTSAC | 7 cut(s) | 289, 580, 1542, 2008, 2482, 3020, 4571 |
| NsiI | ATGCAT | 2 cut(s) | 927, 3772 |
| OliI | CACNNNNGTG | 2 cut(s) | 3935, 4544 |
| PaeI | GCATGC | 3 cut(s) | 3930, 4023, 4950 |
| PaeR7I | CTCGAG | 2 cut(s) | 1683, 4991 |
| PagI | TCATGA | 2 cut(s) | 3694, 4882 |
| PasI | CCCWGGG | 1 cut(s) | 1816 |
| PciI | ACATGT | 1 cut(s) | 2863 |
| PciSI | GCTCTTC | 1 cut(s) | 1614 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 354 |
| PctI | GAATGC | 3 cut(s) | 3539, 3899, 5280 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1132, 2212, 3810 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3655, 5270 |
| PfoI | TCCNGGA | 1 cut(s) | 2668 |
| PinAI | ACCGGT | 1 cut(s) | 2764 |
| PleI | GAGTC | 4 cut(s) | 398, 1293, 3201, 3368 |
| PpsI | GAGTC | 4 cut(s) | 398, 1293, 3201, 3368 |
| Ppu21I | YACGTR | 1 cut(s) | 3668 |
| PpuMI | RGGWCCY | 3 cut(s) | 168, 1321, 3118 |
| PscI | ACATGT | 1 cut(s) | 2863 |
| PshBI | ATTAAT | 3 cut(s) | 2568, 3036, 4500 |
| Psp124BI | GAGCTC | 3 cut(s) | 2402, 3033, 4140 |
| Psp5II | RGGWCCY | 3 cut(s) | 168, 1321, 3118 |
| PspFI | CCCAGC | 1 cut(s) | 945 |
| PspOMI | GGGCCC | 1 cut(s) | 5287 |
| PspPPI | RGGWCCY | 3 cut(s) | 168, 1321, 3118 |
| PspXI | VCTCGAGB | 1 cut(s) | 1683 |
| PstI | CTGCAG | 5 cut(s) | 1114, 1381, 3238, 3318, 5046 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1109, 2701, 3322, 5176 |
| PsuI | RGATCY | 8 cut(s) | 51, 1138, 1630, 1810, 2245, 2599, 2980, 3167 |
| PvuII | CAGCTG | 2 cut(s) | 1157, 2447 |
| RsaI | GTAC | 9 cut(s) | 311, 1242, 1417, 2289, 2375, 2435, 2862, 3710, 5060 |
| RsaNI | GTAC | 9 cut(s) | 310, 1241, 1416, 2288, 2374, 2434, 2861, 3709, 5059 |
| RseI | CAYNNNNRTG | 8 cut(s) | 224, 359, 371, 497, 3815, 3935, 4079, 4544 |
| SacI | GAGCTC | 3 cut(s) | 2402, 3033, 4140 |
| SalI | GTCGAC | 3 cut(s) | 387, 3749, 4532 |
| SapI | GCTCTTC | 1 cut(s) | 1614 |
| SchI | GAGTC | 4 cut(s) | 398, 1294, 3202, 3369 |
| SexAI | ACCWGGT | 1 cut(s) | 1323 |
| Sfr274I | CTCGAG | 2 cut(s) | 1683, 4991 |
| SinI | GGWCC | 6 cut(s) | 168, 472, 1321, 3118, 3398, 4402 |
| SlaI | CTCGAG | 2 cut(s) | 1683, 4991 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 224, 359, 371, 497, 3815, 3935, 4079, 4544 |
| SmlI | CTYRAG | 5 cut(s) | 450, 1683, 2231, 4739, 4991 |
| SmoI | CTYRAG | 5 cut(s) | 450, 1683, 2231, 4739, 4991 |
| SphI | GCATGC | 3 cut(s) | 3930, 4023, 4950 |
| SspI | AATATT | 2 cut(s) | 486, 2966 |
| SspMI | CTAG | 8 cut(s) | 249, 572, 1097, 1592, 1607, 2384, 3923, 4163 |
| SstI | GAGCTC | 3 cut(s) | 2402, 3033, 4140 |
| StyI | CCWWGG | 5 cut(s) | 198, 457, 2383, 3579, 3735 |
| TaiI | ACGT | 8 cut(s) | 17, 245, 281, 1549, 2155, 2560, 3670, 4771 |
| TaqII | GACCGA | 1 cut(s) | 3537 |
| TatI | WGTACW | 6 cut(s) | 309, 2287, 2373, 2433, 2860, 5058 |
| TauI | GCSGC | 6 cut(s) | 206, 209, 1391, 5233, 5257, 5281 |
| TscAI | CASTG | 5 cut(s) | 1287, 1650, 2137, 3760, 4319 |
| TseFI | GTSAC | 7 cut(s) | 289, 580, 1542, 2008, 2482, 3020, 4571 |
| Tsp45I | GTSAC | 7 cut(s) | 289, 580, 1542, 2008, 2482, 3020, 4571 |
| TspGWI | ACGGA | 4 cut(s) | 1403, 1907, 3620, 4211 |
| TspRI | CASTG | 5 cut(s) | 1287, 1650, 2137, 3760, 4319 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3655, 5270 |
| VneI | GTGCAC | 2 cut(s) | 4176, 4466 |
| VpaK11BI | GGWCC | 6 cut(s) | 168, 472, 1321, 3118, 3398, 4402 |
| VspI | ATTAAT | 3 cut(s) | 2568, 3036, 4500 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2780 |
| XapI | RAATTY | 8 cut(s) | 432, 1436, 1727, 2497, 3052, 3286, 3806, 4037 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3082, 3652 |
| XhoI | CTCGAG | 2 cut(s) | 1683, 4991 |
| XmaJI | CCTAGG | 1 cut(s) | 2383 |
| XmiI | GTMKAC | 4 cut(s) | 32, 388, 3750, 4533 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1132, 2212, 3810 |
| XspI | CTAG | 8 cut(s) | 249, 572, 1097, 1592, 1607, 2384, 3923, 4163 |
| Zsp2I | ATGCAT | 2 cut(s) | 927, 3772 |