Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08530 AT3G11130 |
| fragaria_vesca | FvH4_3g39020 FvH4_7g24660 FvH4_7g24660 |
| malus_domestica | MD01G1154700.v1.1 MD03G1065300.v1.1 MD07G1223800.v1.1 MD11G1070100.v1.1 |
| prunus_persica | Prupe.2G252300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 Prupe.6G054300_v2.0.a1 |
| pyrus_communis | pycom01g17210 pycom03g05230 pycom07g20230 pycom07g20240 pycom11g05860 |
| rosa_chinensis | RchiOBHm_Chr1g0370491 RchiOBHm_Chr5g0070331 |
| rosa_laevigata | RLG00000027035 RLG00000036125 |
| rosa_multiflora | Rmu_sc0002558.1_g000009 Rmu_sc0007961.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00010850 Rroxscaffold_4G00286510 |
| rosa_rugosa | Rorug01G0357300 Rorug05G0404900 |
| rosa_samantha | Rh1AG365800 Rh1BG329500 Rh1CG341800 Rh1CG343600 Rh5AG460600 Rh5BG478900 Rh5CG503100 Rh5DG490800 |
| rosa_wichuraiana | Rw1G032230 Rw5G042930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 452 |
| Acc36I | ACCTGC | 2 cut(s) | 1522, 2056 |
| AccB1I | GGYRCC | 1 cut(s) | 716 |
| AccI | GTMKAC | 1 cut(s) | 372 |
| AccII | CGCG | 1 cut(s) | 176 |
| AccIII | TCCGGA | 1 cut(s) | 910 |
| AclI | AACGTT | 1 cut(s) | 53 |
| AclWI | GGATC | 7 cut(s) | 255, 461, 570, 908, 921, 1580, 2753 |
| AcoI | YGGCCR | 3 cut(s) | 1030, 1368, 1800 |
| AcsI | RAATTY | 6 cut(s) | 199, 207, 541, 634, 1182, 1211 |
| AcuI | CTGAAG | 3 cut(s) | 1661, 2036, 2517 |
| AcvI | CACGTG | 1 cut(s) | 2729 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 29, 480, 616, 726, 2560 |
| AflII | CTTAAG | 1 cut(s) | 2038 |
| AflIII | ACRYGT | 4 cut(s) | 61, 1927, 2641, 2728 |
| AjiI | CACGTC | 2 cut(s) | 1322, 2336 |
| AjnI | CCWGG | 7 cut(s) | 505, 622, 724, 978, 1084, 2446, 2887 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1337, 1369, 1811, 1843 |
| Alw21I | GWGCWC | 5 cut(s) | 514, 714, 2177, 2649, 2697 |
| Alw26I | GTCTC | 4 cut(s) | 95, 816, 869, 1626 |
| Alw44I | GTGCAC | 2 cut(s) | 510, 2645 |
| AlwI | GGATC | 7 cut(s) | 255, 461, 570, 908, 921, 1580, 2753 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1091 |
| Ama87I | CYCGRG | 1 cut(s) | 2962 |
| Aor13HI | TCCGGA | 1 cut(s) | 910 |
| AoxI | GGCC | 7 cut(s) | 9, 164, 521, 976, 1030, 1368, 1800 |
| ApaLI | GTGCAC | 2 cut(s) | 510, 2645 |
| ApeKI | GCWGC | 7 cut(s) | 568, 596, 1151, 1163, 1481, 2222, 2225 |
| ApoI | RAATTY | 6 cut(s) | 199, 207, 541, 634, 1182, 1211 |
| AseI | ATTAAT | 6 cut(s) | 36, 999, 1613, 2342, 2346, 2814 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2883 |
| AspLEI | GCGC | 1 cut(s) | 573 |
| AspS9I | GGNCC | 4 cut(s) | 10, 619, 976, 1765 |
| AsuHPI | GGTGA | 6 cut(s) | 163, 404, 544, 1342, 2374, 2452 |
| AvaI | CYCGRG | 1 cut(s) | 2962 |
| AvaII | GGWCC | 2 cut(s) | 619, 1765 |
| AxyI | CCTNAGG | 1 cut(s) | 1590 |
| BaeGI | GKGCMC | 4 cut(s) | 514, 721, 2495, 2649 |
| BamHI | GGATCC | 1 cut(s) | 913 |
| BanI | GGYRCC | 1 cut(s) | 716 |
| BanII | GRGCYC | 4 cut(s) | 714, 2177, 2553, 2977 |
| BauI | CACGAG | 1 cut(s) | 2398 |
| BbrPI | CACGTG | 1 cut(s) | 2729 |
| BbsI | GAAGAC | 3 cut(s) | 1421, 2300, 2931 |
| Bbv12I | GWGCWC | 5 cut(s) | 514, 714, 2177, 2649, 2697 |
| BbvI | GCAGC | 7 cut(s) | 580, 583, 1138, 1150, 1493, 2212, 2234 |
| BccI | CCATC | 2 cut(s) | 742, 2866 |
| BceAI | ACGGC | 2 cut(s) | 872, 2772 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2389, 2423 |
| BciT130I | CCWGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| BclI | TGATCA | 2 cut(s) | 2101, 2937 |
| BcoDI | GTCTC | 4 cut(s) | 95, 816, 869, 1626 |
| BfaI | CTAG | 3 cut(s) | 882, 2480, 2768 |
| BfmI | CTRYAG | 1 cut(s) | 366 |
| BfrI | CTTAAG | 1 cut(s) | 2038 |
| BfuAI | ACCTGC | 2 cut(s) | 1522, 2056 |
| BglII | AGATCT | 5 cut(s) | 1405, 1666, 2020, 2377, 2881 |
| BisI | GCNGC | 9 cut(s) | 569, 597, 1030, 1152, 1164, 1482, 2223, 2226, 2993 |
| BlpI | GCTNAGC | 3 cut(s) | 1155, 1491, 2319 |
| BlsI | GCNGC | 9 cut(s) | 570, 598, 1031, 1153, 1165, 1483, 2224, 2227, 2994 |
| BmcAI | AGTACT | 1 cut(s) | 1262 |
| Bme1390I | CCNGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| Bme18I | GGWCC | 2 cut(s) | 619, 1765 |
| BmeT110I | CYCGRG | 1 cut(s) | 2962 |
| BmgBI | CACGTC | 2 cut(s) | 1322, 2336 |
| BmgT120I | GGNCC | 4 cut(s) | 10, 619, 976, 1765 |
| BmiI | GGNNCC | 6 cut(s) | 621, 718, 915, 977, 1685, 2550 |
| BmrFI | CCNGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| BmrI | ACTGGG | 2 cut(s) | 788, 1409 |
| BmsI | GCATC | 5 cut(s) | 138, 608, 1795, 2320, 2620 |
| BmuI | ACTGGG | 2 cut(s) | 788, 1409 |
| BpiI | GAAGAC | 3 cut(s) | 1421, 2300, 2931 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1275, 1307 |
| BpmI | CTGGAG | 2 cut(s) | 246, 756 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2073 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1155, 1491, 2319 |
| BpuEI | CTTGAG | 2 cut(s) | 1790, 2161 |
| Bsa29I | ATCGAT | 1 cut(s) | 132 |
| BsaAI | YACGTR | 1 cut(s) | 2729 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1428, 2880 |
| BsaWI | WCCGGW | 1 cut(s) | 910 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1349, 1379, 1395, 1425 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 29, 480, 616, 726, 2560 |
| Bse1I | ACTGG | 7 cut(s) | 383, 794, 1367, 1404, 1643, 2239, 2543 |
| Bse21I | CCTNAGG | 1 cut(s) | 1590 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1428, 2880 |
| BseAI | TCCGGA | 1 cut(s) | 910 |
| BseBI | CCWGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| BseCI | ATCGAT | 1 cut(s) | 132 |
| BseGI | GGATG | 3 cut(s) | 1723, 2877, 2881 |
| BseJI | GATNNNNATC | 2 cut(s) | 1428, 2880 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 29, 480, 616, 726, 2560 |
| BseNI | ACTGG | 7 cut(s) | 383, 794, 1367, 1404, 1643, 2239, 2543 |
| BseRI | GAGGAG | 1 cut(s) | 175 |
| BseSI | GKGCMC | 4 cut(s) | 514, 721, 2495, 2649 |
| BseXI | GCAGC | 7 cut(s) | 580, 583, 1138, 1150, 1493, 2212, 2234 |
| BseYI | CCCAGC | 3 cut(s) | 720, 1235, 1857 |
| BsgI | GTGCAG | 2 cut(s) | 168, 2084 |
| Bsh1236I | CGCG | 1 cut(s) | 176 |
| BshFI | GGCC | 7 cut(s) | 11, 166, 523, 978, 1032, 1370, 1802 |
| BshNI | GGYRCC | 1 cut(s) | 716 |
| BshVI | ATCGAT | 1 cut(s) | 132 |
| BsiHKAI | GWGCWC | 5 cut(s) | 514, 714, 2177, 2649, 2697 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2962 |
| BsiSI | CCGG | 2 cut(s) | 305, 911 |
| BslFI | GGGAC | 4 cut(s) | 605, 1156, 1282, 2484 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 29, 480, 616, 726, 2560 |
| BsmAI | GTCTC | 4 cut(s) | 95, 816, 869, 1626 |
| BsmFI | GGGAC | 4 cut(s) | 605, 1156, 1282, 2484 |
| BsmI | GAATGC | 3 cut(s) | 1391, 1748, 2458 |
| BsnI | GGCC | 7 cut(s) | 11, 166, 523, 978, 1032, 1370, 1802 |
| BsoBI | CYCGRG | 1 cut(s) | 2962 |
| Bsp1286I | GDGCHC | 9 cut(s) | 514, 714, 721, 2177, 2495, 2553, 2649, 2697, 2977 |
| Bsp13I | TCCGGA | 1 cut(s) | 910 |
| Bsp1407I | TGTACA | 2 cut(s) | 2394, 2638 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1155, 1491, 2319 |
| BspANI | GGCC | 7 cut(s) | 11, 166, 523, 978, 1032, 1370, 1802 |
| BspDI | ATCGAT | 1 cut(s) | 132 |
| BspEI | TCCGGA | 1 cut(s) | 910 |
| BspFNI | CGCG | 1 cut(s) | 176 |
| BspHI | TCATGA | 1 cut(s) | 3008 |
| BspLI | GGNNCC | 6 cut(s) | 621, 718, 915, 977, 1685, 2550 |
| BspMI | ACCTGC | 2 cut(s) | 1522, 2056 |
| BspPI | GGATC | 7 cut(s) | 255, 461, 570, 908, 921, 1580, 2753 |
| BspT107I | GGYRCC | 1 cut(s) | 716 |
| BspTI | CTTAAG | 1 cut(s) | 2038 |
| BsrGI | TGTACA | 2 cut(s) | 2394, 2638 |
| BsrI | ACTGG | 7 cut(s) | 383, 794, 1367, 1404, 1643, 2239, 2543 |
| BssNAI | GTATAC | 1 cut(s) | 373 |
| BssSI | CACGAG | 1 cut(s) | 2398 |
| BssT1I | CCWWGG | 2 cut(s) | 232, 2158 |
| Bst1107I | GTATAC | 1 cut(s) | 373 |
| Bst2BI | CACGAG | 1 cut(s) | 2398 |
| Bst2UI | CCWGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| Bst6I | CTCTTC | 3 cut(s) | 557, 1676, 2567 |
| BstAFI | CTTAAG | 1 cut(s) | 2038 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 596, 605, 1487 |
| BstAUI | TGTACA | 2 cut(s) | 2394, 2638 |
| BstBAI | YACGTR | 1 cut(s) | 2729 |
| BstC8I | GCNNGC | 6 cut(s) | 1034, 1053, 1161, 1746, 1890, 2850 |
| BstDSI | CCRYGG | 3 cut(s) | 174, 558, 2788 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2558 |
| BstF5I | GGATG | 3 cut(s) | 1723, 2877, 2881 |
| BstFNI | CGCG | 1 cut(s) | 176 |
| BstHHI | GCGC | 1 cut(s) | 573 |
| BstMAI | GTCTC | 4 cut(s) | 95, 816, 869, 1626 |
| BstNI | CCWGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| BstNSI | RCATGY | 6 cut(s) | 65, 596, 704, 1748, 1949, 2645 |
| BstSCI | CCNGG | 7 cut(s) | 505, 622, 724, 978, 1084, 2446, 2887 |
| BstSFI | CTRYAG | 1 cut(s) | 366 |
| BstSLI | GKGCMC | 4 cut(s) | 514, 721, 2495, 2649 |
| BstUI | CGCG | 1 cut(s) | 176 |
| BstV1I | GCAGC | 7 cut(s) | 580, 583, 1138, 1150, 1493, 2212, 2234 |
| BstV2I | GAAGAC | 3 cut(s) | 1421, 2300, 2931 |
| BstX2I | RGATCY | 7 cut(s) | 913, 1405, 1585, 1666, 2020, 2377, 2881 |
| BstYI | RGATCY | 7 cut(s) | 913, 1405, 1585, 1666, 2020, 2377, 2881 |
| BstZ17I | GTATAC | 1 cut(s) | 373 |
| Bsu15I | ATCGAT | 1 cut(s) | 132 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1590 |
| BsuRI | GGCC | 7 cut(s) | 11, 166, 523, 978, 1032, 1370, 1802 |
| BsuTUI | ATCGAT | 1 cut(s) | 132 |
| BtgI | CCRYGG | 3 cut(s) | 174, 558, 2788 |
| BtrI | CACGTC | 2 cut(s) | 1322, 2336 |
| BtsCI | GGATG | 3 cut(s) | 1723, 2877, 2881 |
| BtsI | GCAGTG | 1 cut(s) | 1396 |
| BtsIMutI | CAGTG | 3 cut(s) | 376, 1396, 2550 |
| BveI | ACCTGC | 2 cut(s) | 1522, 2056 |
| Cac8I | GCNNGC | 6 cut(s) | 1034, 1053, 1161, 1746, 1890, 2850 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1091 |
| CciI | TCATGA | 1 cut(s) | 3008 |
| CfoI | GCGC | 1 cut(s) | 573 |
| Cfr13I | GGNCC | 4 cut(s) | 10, 619, 976, 1765 |
| Cfr42I | CCGCGG | 1 cut(s) | 177 |
| ClaI | ATCGAT | 1 cut(s) | 132 |
| CseI | GACGC | 1 cut(s) | 2294 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1236, 1271, 2841, 2876 |
| DraI | TTTAAA | 1 cut(s) | 1725 |
| EaeI | YGGCCR | 3 cut(s) | 1030, 1368, 1800 |
| Eam1104I | CTCTTC | 3 cut(s) | 557, 1676, 2567 |
| EarI | CTCTTC | 3 cut(s) | 557, 1676, 2567 |
| Ecl136II | GAGCTC | 2 cut(s) | 712, 2175 |
| Eco130I | CCWWGG | 2 cut(s) | 232, 2158 |
| Eco147I | AGGCCT | 1 cut(s) | 166 |
| Eco24I | GRGCYC | 4 cut(s) | 714, 2177, 2553, 2977 |
| Eco32I | GATATC | 1 cut(s) | 2200 |
| Eco47I | GGWCC | 2 cut(s) | 619, 1765 |
| Eco53kI | GAGCTC | 2 cut(s) | 712, 2175 |
| Eco57I | CTGAAG | 3 cut(s) | 1661, 2036, 2517 |
| Eco72I | CACGTG | 1 cut(s) | 2729 |
| Eco81I | CCTNAGG | 1 cut(s) | 1590 |
| Eco88I | CYCGRG | 1 cut(s) | 2962 |
| EcoICRI | GAGCTC | 2 cut(s) | 712, 2175 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2558 |
| EcoO109I | RGGNCCY | 3 cut(s) | 10, 619, 1765 |
| EcoRI | GAATTC | 3 cut(s) | 199, 634, 1182 |
| EcoRII | CCWGG | 7 cut(s) | 505, 622, 724, 978, 1084, 2446, 2887 |
| EcoRV | GATATC | 1 cut(s) | 2200 |
| EcoT14I | CCWWGG | 2 cut(s) | 232, 2158 |
| EcoT22I | ATGCAT | 2 cut(s) | 1750, 2111 |
| EcoT38I | GRGCYC | 4 cut(s) | 714, 2177, 2553, 2977 |
| ErhI | CCWWGG | 2 cut(s) | 232, 2158 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 744, 776, 809, 841, 1863, 1895, 2291, 2323 |
| FaqI | GGGAC | 4 cut(s) | 605, 1156, 1282, 2484 |
| FauI | CCCGC | 1 cut(s) | 966 |
| FauNDI | CATATG | 2 cut(s) | 89, 2137 |
| FbaI | TGATCA | 2 cut(s) | 2101, 2937 |
| FblI | GTMKAC | 1 cut(s) | 372 |
| Fnu4HI | GCNGC | 9 cut(s) | 569, 597, 1030, 1152, 1164, 1482, 2223, 2226, 2993 |
| FokI | GGATG | 3 cut(s) | 1730, 2884, 2888 |
| FriOI | GRGCYC | 4 cut(s) | 714, 2177, 2553, 2977 |
| Fsp4HI | GCNGC | 9 cut(s) | 569, 597, 1030, 1152, 1164, 1482, 2223, 2226, 2993 |
| FspBI | CTAG | 3 cut(s) | 882, 2480, 2768 |
| GlaI | GCGC | 1 cut(s) | 572 |
| GluI | GCNGC | 9 cut(s) | 569, 597, 1030, 1152, 1164, 1482, 2223, 2226, 2993 |
| GsaI | CCCAGC | 3 cut(s) | 724, 1239, 1861 |
| GsuI | CTGGAG | 2 cut(s) | 246, 756 |
| HaeIII | GGCC | 7 cut(s) | 11, 166, 523, 978, 1032, 1370, 1802 |
| HapII | CCGG | 2 cut(s) | 305, 911 |
| HgaI | GACGC | 1 cut(s) | 2294 |
| HhaI | GCGC | 1 cut(s) | 573 |
| Hin6I | GCGC | 1 cut(s) | 571 |
| HinP1I | GCGC | 1 cut(s) | 571 |
| HincII | GTYRAC | 1 cut(s) | 2035 |
| HindII | GTYRAC | 1 cut(s) | 2035 |
| HindIII | AAGCTT | 1 cut(s) | 845 |
| HpaII | CCGG | 2 cut(s) | 305, 911 |
| HphI | GGTGA | 6 cut(s) | 163, 404, 544, 1342, 2374, 2452 |
| HpyCH4IV | ACGT | 7 cut(s) | 53, 1321, 1927, 2335, 2430, 2728, 2755 |
| HpySE526I | ACGT | 7 cut(s) | 53, 1321, 1927, 2335, 2430, 2728, 2755 |
| HspAI | GCGC | 1 cut(s) | 571 |
| Kpn2I | TCCGGA | 1 cut(s) | 910 |
| Ksp22I | TGATCA | 2 cut(s) | 2101, 2937 |
| KspI | CCGCGG | 1 cut(s) | 177 |
| LmnI | GCTCC | 8 cut(s) | 307, 508, 1048, 2254, 2328, 2461, 2548, 2608 |
| Lsp1109I | GCAGC | 7 cut(s) | 580, 583, 1138, 1150, 1493, 2212, 2234 |
| LweI | GCATC | 5 cut(s) | 138, 608, 1795, 2320, 2620 |
| MaeI | CTAG | 3 cut(s) | 882, 2480, 2768 |
| MaeII | ACGT | 7 cut(s) | 53, 1321, 1927, 2335, 2430, 2728, 2755 |
| MfeI | CAATTG | 3 cut(s) | 384, 527, 1011 |
| MflI | RGATCY | 7 cut(s) | 913, 1405, 1585, 1666, 2020, 2377, 2881 |
| MhlI | GDGCHC | 9 cut(s) | 514, 714, 721, 2177, 2495, 2553, 2649, 2697, 2977 |
| MlyI | GAGTC | 3 cut(s) | 173, 237, 1178 |
| MmeI | TCCRAC | 2 cut(s) | 928, 1986 |
| Mph1103I | ATGCAT | 2 cut(s) | 1750, 2111 |
| MroI | TCCGGA | 1 cut(s) | 910 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2883 |
| MslI | CAYNNNNRTG | 2 cut(s) | 272, 806 |
| MspA1I | CMGCKG | 4 cut(s) | 176, 462, 1029, 2225 |
| MspCI | CTTAAG | 1 cut(s) | 2038 |
| MspI | CCGG | 2 cut(s) | 305, 911 |
| MspR9I | CCNGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| MunI | CAATTG | 3 cut(s) | 384, 527, 1011 |
| Mva1269I | GAATGC | 3 cut(s) | 1391, 1748, 2458 |
| MvaI | CCWGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| MvnI | CGCG | 1 cut(s) | 176 |
| NdeI | CATATG | 2 cut(s) | 89, 2137 |
| NlaIV | GGNNCC | 6 cut(s) | 621, 718, 915, 977, 1685, 2550 |
| NmeAIII | GCCGAG | 1 cut(s) | 1396 |
| NmuCI | GTSAC | 6 cut(s) | 355, 1317, 1783, 1962, 2798, 2818 |
| NsiI | ATGCAT | 2 cut(s) | 1750, 2111 |
| NspI | RCATGY | 6 cut(s) | 65, 596, 704, 1748, 1949, 2645 |
| PacI | TTAATTAA | 1 cut(s) | 2346 |
| PaeI | GCATGC | 1 cut(s) | 1748 |
| PagI | TCATGA | 1 cut(s) | 3008 |
| PasI | CCCWGGG | 2 cut(s) | 623, 2447 |
| PceI | AGGCCT | 1 cut(s) | 166 |
| PciI | ACATGT | 2 cut(s) | 61, 2641 |
| PctI | GAATGC | 3 cut(s) | 1391, 1748, 2458 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2883 |
| PfeI | GAWTC | 9 cut(s) | 74, 193, 395, 1096, 1304, 2270, 2518, 2578, 2723 |
| PkrI | GCNGC | 9 cut(s) | 570, 598, 1031, 1153, 1165, 1483, 2224, 2227, 2994 |
| PleI | GAGTC | 3 cut(s) | 173, 236, 1177 |
| PmaCI | CACGTG | 1 cut(s) | 2729 |
| PmlI | CACGTG | 1 cut(s) | 2729 |
| PpsI | GAGTC | 3 cut(s) | 173, 236, 1177 |
| Ppu21I | YACGTR | 1 cut(s) | 2729 |
| PpuMI | RGGWCCY | 2 cut(s) | 619, 1765 |
| PscI | ACATGT | 2 cut(s) | 61, 2641 |
| PshBI | ATTAAT | 6 cut(s) | 36, 999, 1613, 2342, 2346, 2814 |
| PsiI | TTATAA | 1 cut(s) | 452 |
| Psp124BI | GAGCTC | 2 cut(s) | 714, 2177 |
| Psp1406I | AACGTT | 1 cut(s) | 53 |
| Psp5II | RGGWCCY | 2 cut(s) | 619, 1765 |
| Psp6I | CCWGG | 7 cut(s) | 505, 622, 724, 978, 1084, 2446, 2887 |
| PspCI | CACGTG | 1 cut(s) | 2729 |
| PspFI | CCCAGC | 3 cut(s) | 720, 1235, 1857 |
| PspGI | CCWGG | 7 cut(s) | 505, 622, 724, 978, 1084, 2446, 2887 |
| PspN4I | GGNNCC | 6 cut(s) | 621, 718, 915, 977, 1685, 2550 |
| PspPI | GGNCC | 4 cut(s) | 10, 619, 976, 1765 |
| PspPPI | RGGWCCY | 2 cut(s) | 619, 1765 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1091 |
| PsuI | RGATCY | 7 cut(s) | 913, 1405, 1585, 1666, 2020, 2377, 2881 |
| PvuII | CAGCTG | 1 cut(s) | 2225 |
| RseI | CAYNNNNRTG | 2 cut(s) | 272, 806 |
| SacI | GAGCTC | 2 cut(s) | 714, 2177 |
| SacII | CCGCGG | 1 cut(s) | 177 |
| SatI | GCNGC | 9 cut(s) | 569, 597, 1030, 1152, 1164, 1482, 2223, 2226, 2993 |
| Sau96I | GGNCC | 4 cut(s) | 10, 619, 976, 1765 |
| ScaI | AGTACT | 1 cut(s) | 1262 |
| SchI | GAGTC | 3 cut(s) | 173, 237, 1178 |
| ScrFI | CCNGG | 7 cut(s) | 507, 624, 726, 980, 1086, 2448, 2889 |
| SduI | GDGCHC | 9 cut(s) | 514, 714, 721, 2177, 2495, 2553, 2649, 2697, 2977 |
| SfaNI | GCATC | 5 cut(s) | 138, 608, 1795, 2320, 2620 |
| SfcI | CTRYAG | 1 cut(s) | 366 |
| Sfr303I | CCGCGG | 1 cut(s) | 177 |
| SgrBI | CCGCGG | 1 cut(s) | 177 |
| SinI | GGWCC | 2 cut(s) | 619, 1765 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 272, 806 |
| SmlI | CTYRAG | 3 cut(s) | 1769, 2038, 2176 |
| SmoI | CTYRAG | 3 cut(s) | 1769, 2038, 2176 |
| SphI | GCATGC | 1 cut(s) | 1748 |
| SseBI | AGGCCT | 1 cut(s) | 166 |
| SspI | AATATT | 3 cut(s) | 261, 2081, 2744 |
| SspMI | CTAG | 3 cut(s) | 882, 2480, 2768 |
| SstI | GAGCTC | 2 cut(s) | 714, 2177 |
| StuI | AGGCCT | 1 cut(s) | 166 |
| StyD4I | CCNGG | 7 cut(s) | 505, 622, 724, 978, 1084, 2446, 2887 |
| StyI | CCWWGG | 2 cut(s) | 232, 2158 |
| TaiI | ACGT | 7 cut(s) | 56, 1324, 1930, 2338, 2433, 2731, 2758 |
| TaqI | TCGA | 5 cut(s) | 132, 270, 1383, 1579, 1991 |
| TatI | WGTACW | 9 cut(s) | 84, 819, 1140, 1260, 2148, 2211, 2394, 2638, 2918 |
| TauI | GCSGC | 2 cut(s) | 1032, 2995 |
| TfiI | GAWTC | 9 cut(s) | 74, 193, 395, 1096, 1304, 2270, 2518, 2578, 2723 |
| TscAI | CASTG | 3 cut(s) | 383, 1396, 2550 |
| TseFI | GTSAC | 6 cut(s) | 355, 1317, 1783, 1962, 2798, 2818 |
| TseI | GCWGC | 7 cut(s) | 568, 596, 1151, 1163, 1481, 2222, 2225 |
| Tsp45I | GTSAC | 6 cut(s) | 355, 1317, 1783, 1962, 2798, 2818 |
| TspGWI | ACGGA | 2 cut(s) | 547, 947 |
| TspRI | CASTG | 3 cut(s) | 383, 1396, 2550 |
| Vha464I | CTTAAG | 1 cut(s) | 2038 |
| VneI | GTGCAC | 2 cut(s) | 510, 2645 |
| VpaK11BI | GGWCC | 2 cut(s) | 619, 1765 |
| VspI | ATTAAT | 6 cut(s) | 36, 999, 1613, 2342, 2346, 2814 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2558 |
| XapI | RAATTY | 6 cut(s) | 199, 207, 541, 634, 1182, 1211 |
| XceI | RCATGY | 6 cut(s) | 65, 596, 704, 1748, 1949, 2645 |
| XmiI | GTMKAC | 1 cut(s) | 372 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2883 |
| XspI | CTAG | 3 cut(s) | 882, 2480, 2768 |
| ZrmI | AGTACT | 1 cut(s) | 1262 |
| Zsp2I | ATGCAT | 2 cut(s) | 1750, 2111 |