Prupe.4G139100_v2.0.a1

Mitotic spindle assembly checkpoint protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
7760232 .. 7761409
1178 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G139100.1

Sequence Viewer

Length: 435 bp
ATGAGCATAATTCAAATTGATATTGGTGCAGGTGAGACAGCTCGGATTCTGGTTGAATTCCTGAAGGTGGCAATCACTTCAATCGTTTTCCTCAAAGGAATTTACCCTCCAGACGTACATTTTACAAACTGGGGTCCGGTGGAGAGAGTAGCAGTTATTTTCTTTAACAGTGATAACATCCCTGTGGAAAGATTTATGTTTAAGCCTCTGAATCAGTCTTATGGCTCAAGGATGGAAGAAGCTGACCTGGAGTTCTCACTAAGGTCGTTTTTTATCAAGCTTCCTTTCTCAGAATCCCTTACACGGGTTCTTCCCCAGGTTTGCAGGTGGGAGATAACCGCGTACTTTCGATCCCTTCCTCAGACAAGCACAAGTAAGGATGCAGAGTTGTGGATTCCAACAGACACACAGCAGTGGCAACAGCCCCTCCATTAA

Protein Analysis

145

Amino Acids

16.67

Weight (kDa)

5.35

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 20, 315
Acc36I ACCTGC 2 cut(s) 20, 315
AccII CGCG 1 cut(s) 341
AciI CCGC 1 cut(s) 339
AclWI GGATC 1 cut(s) 345
AcsI RAATTY 2 cut(s) 56, 99
AcuI CTGAAG 1 cut(s) 83
AfaI GTAC 2 cut(s) 117, 344
AfiI CCNNNNNNNGG 3 cut(s) 67, 303, 304
AgsI TTSAA 3 cut(s) 14, 56, 81
AjnI CCWGG 2 cut(s) 246, 315
AleI CACNNNNGTG 1 cut(s) 412
AluBI AGCT 3 cut(s) 41, 242, 280
AluI AGCT 3 cut(s) 41, 242, 280
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 1 cut(s) 345
ApoI RAATTY 2 cut(s) 56, 99
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 44
AvaII GGWCC 1 cut(s) 134
BccI CCATC 1 cut(s) 226
BciT130I CCWGG 2 cut(s) 248, 317
BcoDI GTCTC 1 cut(s) 29
BfuAI ACCTGC 2 cut(s) 20, 315
Bme1390I CCNGG 2 cut(s) 248, 317
Bme18I GGWCC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 1 cut(s) 135
BmrFI CCNGG 2 cut(s) 248, 317
BmrI ACTGGG 1 cut(s) 139
BmsI GCATC 1 cut(s) 370
BmuI ACTGGG 1 cut(s) 139
BpmI CTGGAG 2 cut(s) 93, 269
BpuEI CTTGAG 1 cut(s) 211
BsaJI CCNNGG 1 cut(s) 315
BsaWI WCCGGW 1 cut(s) 136
BsaXI ACNNNNNCTCC 1 cut(s) 411
Bsc4I CCNNNNNNNGG 3 cut(s) 67, 303, 304
Bse1I ACTGG 1 cut(s) 134
BseBI CCWGG 2 cut(s) 248, 317
BseDI CCNNGG 1 cut(s) 315
BseGI GGATG 3 cut(s) 177, 237, 385
BseLI CCNNNNNNNGG 3 cut(s) 67, 303, 304
BseMII CTCAG 2 cut(s) 303, 374
BseNI ACTGG 1 cut(s) 134
BsgI GTGCAG 1 cut(s) 48
Bsh1236I CGCG 1 cut(s) 341
BsiSI CCGG 1 cut(s) 137
BslI CCNNNNNNNGG 3 cut(s) 67, 303, 304
BsmAI GTCTC 1 cut(s) 29
Bsp143I GATC 1 cut(s) 350
BspACI CCGC 1 cut(s) 339
BspCNI CTCAG 2 cut(s) 302, 373
BspFNI CGCG 1 cut(s) 341
BspLI GGNNCC 1 cut(s) 135
BspMI ACCTGC 2 cut(s) 20, 315
BspPI GGATC 1 cut(s) 345
BsrI ACTGG 1 cut(s) 134
BssECI CCNNGG 1 cut(s) 315
BssMI GATC 1 cut(s) 350
Bst2UI CCWGG 2 cut(s) 248, 317
Bst4CI ACNGT 1 cut(s) 170
BstDEI CTNAG 3 cut(s) 260, 289, 360
BstF5I GGATG 3 cut(s) 177, 237, 385
BstFNI CGCG 1 cut(s) 341
BstKTI GATC 1 cut(s) 353
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 1 cut(s) 350
BstNI CCWGG 2 cut(s) 248, 317
BstSCI CCNGG 2 cut(s) 246, 315
BstUI CGCG 1 cut(s) 341
BtsCI GGATG 3 cut(s) 177, 237, 385
BtsI GCAGTG 1 cut(s) 419
BtsIMutI CAGTG 2 cut(s) 175, 419
BveI ACCTGC 2 cut(s) 20, 315
Cfr13I GGNCC 1 cut(s) 134
Csp6I GTAC 2 cut(s) 116, 343
CviJI RGCY 6 cut(s) 41, 205, 225, 242, 280, 424
CviKI_1 RGCY 6 cut(s) 41, 205, 225, 242, 280, 424
CviQI GTAC 2 cut(s) 116, 343
DdeI CTNAG 3 cut(s) 260, 289, 360
DpnI GATC 1 cut(s) 352
DpnII GATC 1 cut(s) 350
Eco47I GGWCC 1 cut(s) 134
Eco57I CTGAAG 1 cut(s) 83
EcoRI GAATTC 1 cut(s) 56
EcoRII CCWGG 2 cut(s) 246, 315
FaiI YATR 3 cut(s) 8, 197, 222
FokI GGATG 3 cut(s) 164, 244, 392
GsuI CTGGAG 2 cut(s) 93, 269
HapII CCGG 1 cut(s) 137
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 4 cut(s) 46, 211, 293, 394
HpaII CCGG 1 cut(s) 137
HphI GGTGA 1 cut(s) 44
Hpy188I TCNGA 4 cut(s) 45, 210, 292, 363
Hpy188III TCNNGA 2 cut(s) 61, 110
HpyAV CCTTC 2 cut(s) 58, 365
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 3 cut(s) 29, 324, 383
HpyF3I CTNAG 3 cut(s) 260, 289, 360
HpySE526I ACGT 1 cut(s) 114
Kzo9I GATC 1 cut(s) 350
LweI GCATC 1 cut(s) 370
MaeII ACGT 1 cut(s) 114
MalI GATC 1 cut(s) 352
MboI GATC 1 cut(s) 350
MboII GAAGA 2 cut(s) 248, 302
MluCI AATT 4 cut(s) 9, 15, 56, 99
MmeI TCCRAC 1 cut(s) 422
MnlI CCTC 4 cut(s) 101, 117, 216, 369
MseI TTAA 3 cut(s) 165, 201, 433
MslI CAYNNNNRTG 2 cut(s) 182, 412
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 2 cut(s) 248, 317
MvaI CCWGG 2 cut(s) 248, 317
MvnI CGCG 1 cut(s) 341
NdeII GATC 1 cut(s) 350
NlaIV GGNNCC 1 cut(s) 135
OliI CACNNNNGTG 1 cut(s) 412
PaqCI CACCTGC 2 cut(s) 20, 315
PfeI GAWTC 4 cut(s) 46, 211, 293, 394
Psp6I CCWGG 2 cut(s) 246, 315
PspGI CCWGG 2 cut(s) 246, 315
PspN4I GGNNCC 1 cut(s) 135
PspPI GGNCC 1 cut(s) 134
RsaI GTAC 2 cut(s) 117, 344
RsaNI GTAC 2 cut(s) 116, 343
RseI CAYNNNNRTG 2 cut(s) 182, 412
SaqAI TTAA 3 cut(s) 165, 201, 433
Sau3AI GATC 1 cut(s) 350
Sau96I GGNCC 1 cut(s) 134
ScrFI CCNGG 2 cut(s) 248, 317
SfaNI GCATC 1 cut(s) 370
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 2 cut(s) 182, 412
SmlI CTYRAG 1 cut(s) 226
SmoI CTYRAG 1 cut(s) 226
Sse9I AATT 4 cut(s) 9, 15, 56, 99
SsiI CCGC 1 cut(s) 339
StyD4I CCNGG 2 cut(s) 246, 315
TaaI ACNGT 1 cut(s) 170
TaiI ACGT 1 cut(s) 117
TaqI TCGA 1 cut(s) 349
TasI AATT 4 cut(s) 9, 15, 56, 99
TfiI GAWTC 4 cut(s) 46, 211, 293, 394
Tru1I TTAA 3 cut(s) 165, 201, 433
Tru9I TTAA 3 cut(s) 165, 201, 433
TscAI CASTG 2 cut(s) 175, 419
TspRI CASTG 2 cut(s) 175, 419
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 2 cut(s) 56, 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.