Rh5AG185300

Mitotic spindle assembly checkpoint protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
21211881 .. 21212490
610 bp
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UTR
Exon/CDS
Intron
Rh5AG185300.1

Sequence Viewer

Length: 339 bp
ATGGAAAGATTTATGTTTAAGCTCACTGTGGATCAGTCTTGTGGCTCAAACGTCAAAGAAGCTGACCTGGAGTTCTCACTTAGGTCATTCTTTATCAAGCTTCCTCTCATAGAATCCGCTACTAAGGTTCTTCCTCAGAATTGCAGGTGGGAGATAACGGCATACTTCCGGTCCCTTCCTCAGGAAATTTCAAGCAAGAATGAAGGGTTGTGGCTTCCAACAGACACAAAGCAGTGGCAACAACCTCCCCTAATAACTCCTATTAAGTCGATGAGTAGCCAACCTCTCTCTGTGCAGTTGTATCTAGAACATCCAAGTGTATATGAACCAAAGCTGTGA

Protein Analysis

112

Amino Acids

13.01

Weight (kDa)

6.57

Isoelectric Point (pI)

65.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 135
Acc36I ACCTGC 1 cut(s) 135
AciI CCGC 1 cut(s) 117
AclWI GGATC 1 cut(s) 39
AcsI RAATTY 1 cut(s) 186
AfiI CCNNNNNNNGG 1 cut(s) 181
AgsI TTSAA 1 cut(s) 192
AjnI CCWGG 1 cut(s) 66
AluBI AGCT 4 cut(s) 22, 62, 100, 334
AluI AGCT 4 cut(s) 22, 62, 100, 334
AlwI GGATC 1 cut(s) 39
ApoI RAATTY 1 cut(s) 186
AspS9I GGNCC 1 cut(s) 171
AvaII GGWCC 1 cut(s) 171
AxyI CCTNAGG 1 cut(s) 180
BceAI ACGGC 1 cut(s) 174
BciT130I CCWGG 1 cut(s) 68
BfaI CTAG 1 cut(s) 305
BfuAI ACCTGC 1 cut(s) 135
Bme1390I CCNGG 1 cut(s) 68
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 171
BmiI GGNNCC 1 cut(s) 173
BmrFI CCNGG 1 cut(s) 68
BpmI CTGGAG 1 cut(s) 89
BsaWI WCCGGW 1 cut(s) 168
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse21I CCTNAGG 1 cut(s) 180
BseBI CCWGG 1 cut(s) 68
BseGI GGATG 1 cut(s) 310
BseLI CCNNNNNNNGG 1 cut(s) 181
BseMII CTCAG 2 cut(s) 149, 194
BsgI GTGCAG 1 cut(s) 314
BsiSI CCGG 1 cut(s) 169
BslFI GGGAC 1 cut(s) 157
BslI CCNNNNNNNGG 1 cut(s) 181
BsmFI GGGAC 1 cut(s) 157
Bsp143I GATC 1 cut(s) 31
BspACI CCGC 1 cut(s) 117
BspCNI CTCAG 2 cut(s) 148, 193
BspLI GGNNCC 1 cut(s) 173
BspMI ACCTGC 1 cut(s) 135
BspPI GGATC 1 cut(s) 39
BssMI GATC 1 cut(s) 31
Bst2UI CCWGG 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 28
BstDEI CTNAG 4 cut(s) 80, 123, 135, 180
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 1 cut(s) 310
BstKTI GATC 1 cut(s) 34
BstMBI GATC 1 cut(s) 31
BstNI CCWGG 1 cut(s) 68
BstSCI CCNGG 1 cut(s) 66
Bsu36I CCTNAGG 1 cut(s) 180
BtsCI GGATG 1 cut(s) 310
BtsI GCAGTG 1 cut(s) 239
BtsIMutI CAGTG 2 cut(s) 24, 239
BveI ACCTGC 1 cut(s) 135
Cfr13I GGNCC 1 cut(s) 171
CviJI RGCY 7 cut(s) 22, 45, 62, 100, 214, 279, 334
CviKI_1 RGCY 7 cut(s) 22, 45, 62, 100, 214, 279, 334
DdeI CTNAG 4 cut(s) 80, 123, 135, 180
DpnI GATC 1 cut(s) 33
DpnII GATC 1 cut(s) 31
Eco47I GGWCC 1 cut(s) 171
Eco81I CCTNAGG 1 cut(s) 180
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoRII CCWGG 1 cut(s) 66
FaiI YATR 5 cut(s) 14, 110, 163, 322, 324
FaqI GGGAC 1 cut(s) 157
FokI GGATG 1 cut(s) 297
FspBI CTAG 1 cut(s) 305
GsuI CTGGAG 1 cut(s) 89
HapII CCGG 1 cut(s) 169
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 1 cut(s) 113
HpaII CCGG 1 cut(s) 169
Hpy188I TCNGA 1 cut(s) 138
Hpy188III TCNNGA 2 cut(s) 182, 305
HpyAV CCTTC 2 cut(s) 185, 197
HpyCH4III ACNGT 1 cut(s) 28
HpyCH4IV ACGT 1 cut(s) 51
HpyCH4V TGCA 2 cut(s) 144, 295
HpyF3I CTNAG 4 cut(s) 80, 123, 135, 180
HpySE526I ACGT 1 cut(s) 51
Kzo9I GATC 1 cut(s) 31
LpnPI CCDG 5 cut(s) 53, 80, 130, 167, 182
MaeI CTAG 1 cut(s) 305
MaeII ACGT 1 cut(s) 51
MalI GATC 1 cut(s) 33
MboI GATC 1 cut(s) 31
MboII GAAGA 1 cut(s) 122
MluCI AATT 2 cut(s) 139, 186
MmeI TCCRAC 1 cut(s) 242
MnlI CCTC 5 cut(s) 114, 144, 189, 255, 294
MseI TTAA 2 cut(s) 18, 264
MslI CAYNNNNRTG 1 cut(s) 315
MspI CCGG 1 cut(s) 169
MspR9I CCNGG 1 cut(s) 68
MvaI CCWGG 1 cut(s) 68
NdeII GATC 1 cut(s) 31
NlaIV GGNNCC 1 cut(s) 173
PaqCI CACCTGC 1 cut(s) 135
PfeI GAWTC 1 cut(s) 113
Psp6I CCWGG 1 cut(s) 66
PspGI CCWGG 1 cut(s) 66
PspN4I GGNNCC 1 cut(s) 173
PspPI GGNCC 1 cut(s) 171
RseI CAYNNNNRTG 1 cut(s) 315
SaqAI TTAA 2 cut(s) 18, 264
Sau3AI GATC 1 cut(s) 31
Sau96I GGNCC 1 cut(s) 171
ScrFI CCNGG 1 cut(s) 68
SinI GGWCC 1 cut(s) 171
SmiMI CAYNNNNRTG 1 cut(s) 315
Sse9I AATT 2 cut(s) 139, 186
SsiI CCGC 1 cut(s) 117
SspMI CTAG 1 cut(s) 305
StyD4I CCNGG 1 cut(s) 66
TaaI ACNGT 1 cut(s) 28
TaiI ACGT 1 cut(s) 54
TaqI TCGA 1 cut(s) 269
TasI AATT 2 cut(s) 139, 186
TfiI GAWTC 1 cut(s) 113
Tru1I TTAA 2 cut(s) 18, 264
Tru9I TTAA 2 cut(s) 18, 264
TscAI CASTG 2 cut(s) 31, 239
TspDTI ATGAA 2 cut(s) 216, 339
TspRI CASTG 2 cut(s) 31, 239
VpaK11BI GGWCC 1 cut(s) 171
XagI CCTNNNNNAGG 1 cut(s) 179
XapI RAATTY 1 cut(s) 186
XbaI TCTAGA 1 cut(s) 304
XspI CTAG 1 cut(s) 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.