Prupe.4G141800_v2.0.a1

Mitotic spindle assembly checkpoint protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
8076516 .. 8078463
1948 bp
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UTR
Exon/CDS
Intron
Prupe.4G141800.2

Sequence Viewer

Length: 597 bp
ATGGACCGCAAAGATAATCAATCTCCCCAAGGTTTCAGTGACATCCTTACTTCCGGTGAGACAGCTCGGATTCTGGTTGAATTCCTGGAGGTGGCAATCACTTCAATCGTTCTCCTCAAAGGAATTTACCCTCCAGGTGCTTTTGAAAGAAGGAAATATATGAATTTGGTGGTTCATAGCGCTCGTCACCCTCAACTCAGAGATTATATCCATTCTGCTGTCTCGGGACTTTATCCTTTCATCCAAAAGGGTCTGGTGGAGAGAGTAGCAGTTATTTTCTTTAACAGTGATAACATCCCTGTGGAAAGATTTATGTTTAAGCTCACTGTGAATCAGTCTTATGGCTCAAGGGTGGAAGAAGCTGACCTGGAGTTCTCACTAAGGTCGTTTTTTTTATCAAGCTTCCTTTCTCAGAATCCCTTACACGGGTTCTTCCCTAGGGCAAGTACAAGTAAGGATGCAGAGTTATGGATTCCAACAGACACACAGCAATGGCAACAGCCTCCATTAATAACTCCTCTTAAATCGATGAGTAGCGAACCTCTATCTGTGCAGTTATATTTGGAACATCCAGGTTTATCTGAACCAAAGGCTTAA

Protein Analysis

199

Amino Acids

22.51

Weight (kDa)

6.21

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 7
AcsI RAATTY 3 cut(s) 80, 123, 163
AfaI GTAC 1 cut(s) 448
AfeI AGCGCT 1 cut(s) 181
AfiI CCNNNNNNNGG 3 cut(s) 91, 425, 426
AgsI TTSAA 3 cut(s) 80, 105, 146
AjnI CCWGG 4 cut(s) 84, 133, 366, 571
AluBI AGCT 4 cut(s) 65, 322, 362, 402
AluI AGCT 4 cut(s) 65, 322, 362, 402
Alw26I GTCTC 2 cut(s) 53, 226
Ama87I CYCGRG 1 cut(s) 223
Aor51HI AGCGCT 1 cut(s) 181
ApoI RAATTY 3 cut(s) 80, 123, 163
AseI ATTAAT 1 cut(s) 509
AspA2I CCTAGG 1 cut(s) 437
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 68, 179
AvaI CYCGRG 1 cut(s) 223
AvaII GGWCC 1 cut(s) 4
AvrII CCTAGG 1 cut(s) 437
BciT130I CCWGG 4 cut(s) 86, 135, 368, 573
BcoDI GTCTC 2 cut(s) 53, 226
BfaI CTAG 1 cut(s) 438
BfoI RGCGCY 1 cut(s) 183
BlnI CCTAGG 1 cut(s) 437
Bme1390I CCNGG 4 cut(s) 86, 135, 368, 573
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 223
BmgT120I GGNCC 1 cut(s) 4
BmrFI CCNGG 4 cut(s) 86, 135, 368, 573
BmsI GCATC 1 cut(s) 448
BpmI CTGGAG 3 cut(s) 107, 117, 389
BpuEI CTTGAG 1 cut(s) 331
Bsa29I ATCGAT 1 cut(s) 527
BsaJI CCNNGG 2 cut(s) 28, 437
BsaWI WCCGGW 1 cut(s) 53
Bsc4I CCNNNNNNNGG 3 cut(s) 91, 425, 426
Bse3DI GCAATG 1 cut(s) 497
BseBI CCWGG 4 cut(s) 86, 135, 368, 573
BseCI ATCGAT 1 cut(s) 527
BseDI CCNNGG 2 cut(s) 28, 437
BseGI GGATG 5 cut(s) 42, 240, 294, 463, 568
BseLI CCNNNNNNNGG 3 cut(s) 91, 425, 426
BseMI GCAATG 1 cut(s) 497
BseMII CTCAG 2 cut(s) 211, 425
BseRI GAGGAG 2 cut(s) 104, 507
BsgI GTGCAG 1 cut(s) 572
BshVI ATCGAT 1 cut(s) 527
BsiHKCI CYCGRG 1 cut(s) 223
BsiSI CCGG 1 cut(s) 54
BslFI GGGAC 1 cut(s) 240
BslI CCNNNNNNNGG 3 cut(s) 91, 425, 426
BsmAI GTCTC 2 cut(s) 53, 226
BsmFI GGGAC 1 cut(s) 240
BsoBI CYCGRG 1 cut(s) 223
BspACI CCGC 1 cut(s) 7
BspCNI CTCAG 2 cut(s) 210, 424
BspDI ATCGAT 1 cut(s) 527
BsrDI GCAATG 1 cut(s) 497
BssECI CCNNGG 2 cut(s) 28, 437
BssT1I CCWWGG 2 cut(s) 28, 437
Bst2UI CCWGG 4 cut(s) 86, 135, 368, 573
Bst4CI ACNGT 2 cut(s) 287, 328
BstDEI CTNAG 3 cut(s) 197, 380, 411
BstF5I GGATG 5 cut(s) 42, 240, 294, 463, 568
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 1 cut(s) 182
BstMAI GTCTC 2 cut(s) 53, 226
BstNI CCWGG 4 cut(s) 86, 135, 368, 573
BstSCI CCNGG 4 cut(s) 84, 133, 366, 571
Bsu15I ATCGAT 1 cut(s) 527
BsuTUI ATCGAT 1 cut(s) 527
BtsCI GGATG 5 cut(s) 42, 240, 294, 463, 568
BtsIMutI CAGTG 3 cut(s) 43, 292, 324
CfoI GCGC 1 cut(s) 182
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 527
Csp6I GTAC 1 cut(s) 447
CviJI RGCY 7 cut(s) 65, 322, 345, 362, 402, 502, 593
CviKI_1 RGCY 7 cut(s) 65, 322, 345, 362, 402, 502, 593
CviQI GTAC 1 cut(s) 447
DdeI CTNAG 3 cut(s) 197, 380, 411
Eco130I CCWWGG 2 cut(s) 28, 437
Eco47I GGWCC 1 cut(s) 4
Eco47III AGCGCT 1 cut(s) 181
Eco88I CYCGRG 1 cut(s) 223
EcoRI GAATTC 1 cut(s) 80
EcoRII CCWGG 4 cut(s) 84, 133, 366, 571
EcoT14I CCWWGG 2 cut(s) 28, 437
ErhI CCWWGG 2 cut(s) 28, 437
FaiI YATR 8 cut(s) 159, 161, 177, 207, 314, 342, 469, 559
FaqI GGGAC 1 cut(s) 240
FokI GGATG 5 cut(s) 29, 227, 281, 470, 555
FspBI CTAG 1 cut(s) 438
GlaI GCGC 1 cut(s) 181
GsuI CTGGAG 3 cut(s) 107, 117, 389
HaeII RGCGCY 1 cut(s) 183
HapII CCGG 1 cut(s) 54
HhaI GCGC 1 cut(s) 182
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HindIII AAGCTT 1 cut(s) 400
HinfI GANTC 4 cut(s) 70, 331, 415, 472
HpaII CCGG 1 cut(s) 54
HphI GGTGA 2 cut(s) 68, 179
Hpy188I TCNGA 4 cut(s) 69, 200, 414, 583
Hpy188III TCNNGA 1 cut(s) 225
HpyAV CCTTC 1 cut(s) 144
HpyCH4III ACNGT 2 cut(s) 287, 328
HpyCH4V TGCA 2 cut(s) 461, 553
HpyF3I CTNAG 3 cut(s) 197, 380, 411
HspAI GCGC 1 cut(s) 180
LweI GCATC 1 cut(s) 448
MaeI CTAG 1 cut(s) 438
MaeIII GTNAC 2 cut(s) 38, 185
MboII GAAGA 2 cut(s) 368, 424
MluCI AATT 3 cut(s) 80, 123, 163
MmeI TCCRAC 1 cut(s) 500
MnlI CCTC 7 cut(s) 82, 125, 141, 201, 513, 528, 552
MseI TTAA 5 cut(s) 282, 318, 509, 522, 595
MslI CAYNNNNRTG 2 cut(s) 299, 490
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 4 cut(s) 86, 135, 368, 573
MvaI CCWGG 4 cut(s) 86, 135, 368, 573
NmuCI GTSAC 2 cut(s) 38, 185
PfeI GAWTC 4 cut(s) 70, 331, 415, 472
PfoI TCCNGGA 1 cut(s) 84
PshBI ATTAAT 1 cut(s) 509
Psp6I CCWGG 4 cut(s) 84, 133, 366, 571
PspGI CCWGG 4 cut(s) 84, 133, 366, 571
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 448
RsaNI GTAC 1 cut(s) 447
RseI CAYNNNNRTG 2 cut(s) 299, 490
SaqAI TTAA 5 cut(s) 282, 318, 509, 522, 595
Sau96I GGNCC 1 cut(s) 4
ScrFI CCNGG 4 cut(s) 86, 135, 368, 573
SfaNI GCATC 1 cut(s) 448
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 2 cut(s) 299, 490
SmlI CTYRAG 1 cut(s) 346
SmoI CTYRAG 1 cut(s) 346
Sse9I AATT 3 cut(s) 80, 123, 163
SsiI CCGC 1 cut(s) 7
SspMI CTAG 1 cut(s) 438
StyD4I CCNGG 4 cut(s) 84, 133, 366, 571
StyI CCWWGG 2 cut(s) 28, 437
TaaI ACNGT 2 cut(s) 287, 328
TaqI TCGA 1 cut(s) 527
TasI AATT 3 cut(s) 80, 123, 163
TatI WGTACW 1 cut(s) 446
TfiI GAWTC 4 cut(s) 70, 331, 415, 472
Tru1I TTAA 5 cut(s) 282, 318, 509, 522, 595
Tru9I TTAA 5 cut(s) 282, 318, 509, 522, 595
TscAI CASTG 3 cut(s) 43, 292, 331
TseFI GTSAC 2 cut(s) 38, 185
Tsp45I GTSAC 2 cut(s) 38, 185
TspDTI ATGAA 3 cut(s) 164, 176, 229
TspRI CASTG 3 cut(s) 43, 292, 331
VpaK11BI GGWCC 1 cut(s) 4
VspI ATTAAT 1 cut(s) 509
XapI RAATTY 3 cut(s) 80, 123, 163
XmaJI CCTAGG 1 cut(s) 437
XspI CTAG 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.