Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002746

Physical Location & Seq

Genomic Coordinates Reverse (-)

12946569 .. 12952807

Gene Structure 6239 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G208000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGGGGCGTAACCTTTCAAATCATTCAGAATCTCCAGTTGGGGACCCTCCTCGTAGGAGGAGCCCATCTAGGAAAAGTCCATCCAGAATAGAAAGATCACCTACTCGACATAGGAGGTCCCACAGGGGTAGTTCTCCACCAAGAGAGAAACATTCAGGTCACCCTAAGTCTCCAAAGCATGCAAGGTCCCCCTCTCCTCCTGTTCGCTCTCCTTCTCCTCGGACAAAACGGTTAAGAAGAGCTCAAGCTGGCAGAGAGGCTGTTAAAGAACCTGAAAGAAGTAACGGGAGGGGAACTGATAGGGGTTTACAGAAGGAAGGGGTTTCAGAGAGAGATGTCGGGAGTGATAGGAAAGAGAAACGGTCGGGAAGAGACGATGTTGATGGTAAATCATCAAGACCAAGACATGGTACTTCTCCATCAGATCGACAGCGAAGGAGTAGGCATATATCTCCCTCGCCTCAACCTGCTGGTGTTACCAGAGACGTGGAGAAAGTAATTGAGAATGACAGTGAAAGGAATCATGGCAGATGGAGTGATAGAAGAATGCAAAGGGAAAAGGGTTCAGATAGGGAAACCGATAGTGAAAGAGTGGAGAGAAGGTCAGGAAAAGACAGTACTGATCATAGGTCTTCAAGAACAAGACATGGGCGATCTACTTCTCCATTGGATCGGGACCACAAGAACAGACAAAGATCTCTTTCACCTCAACAAGCTGCCAATACCAGAGCTCGTGATGAGGTGCCAAATTCAAGAGAAGATGAGCATAGGGATGATGAGAATGATGCAGTAGCTATGATGAAGGCTGCTGAGGAGGCCTTGGAAGCAAAGCAAAAGGAAAAACCTTCGTTTGAGCTATCTGGAAAGCTTGCTGCAGAAACTAATAGGGTCAGGGGTATAACACTTTTATTCACTGAGCCTCCAGATGGACGAAAACCTGATGTAAGATGGCGGCTTTATGTATTCAAGGGCGGTGAAGTGTTAAATGAACCCCTGTACATACATCGGCAAAGCTGTTACCTCTTTGGGAGGGAAAGAAGGGTGGCAGACGTCCCTACAGATCACCCATCCTGTAGCAAGCAACATGCTGTTATACAATTCAGGCAAGTTGAAATGGAGCAACCTGATGGTACATTATCAAAGAAAGTAAGGCCTTACTTAATGGACCTTGGAAGCACAAATAAAACTTTTCTTAATGATACTGCAATTGAACCTCAACGGTATTATGAACTAATGGAAAAGGACACCATTAGATTTGGTAATAGTAGCCGAGAGTATGTACTACTGCACGAGAACTCTATGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008283 GO:0009507 GO:0009536 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0019222 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040008 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048638 GO:0050789 GO:0050793 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

436

Amino Acids

49.94

Weight (kDa)

10.29

Isoelectric Point (pI)

79.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24410 AT3G20550
fragaria_vesca	FvH4_3g22101 FvH4_3g22101 FvH4_3g22101 FvH4_3g22101 FvH4_3g22101 FvH4_6g43590
malus_domestica	MD03G1208700.v1.1 MD06G1125500.v1.1 MD11G1223400.v1.1
prunus_persica	Prupe.4G208000_v2.0.a1
pyrus_communis	pycom06g11580 pycom11g19700
rosa_chinensis	RchiOBHm_Chr2g0160171 RchiOBHm_Chr4g0405041 RchiOBHm_Chr5g0037921
rosa_laevigata	RLG00000008882 RLG00000021201 RLG00000033823
rosa_multiflora	Rmu_sc0001744.1_g000004 Rmu_ssc0000241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042940 Rroxscaffold_5G00349230
rosa_rugosa	Rorug04G0052500 Rorug05G0169400 Rorug05G0169500 Rorug05G0169600
rosa_samantha	Rh2BG560700 Rh4AG127600 Rh4BG121300 Rh4CG135400 Rh4DG121700 Rh5AG257700 Rh5BG260500 Rh5CG293100
rosa_wichuraiana	Rw2G045270 Rw4G010330 Rw5G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1053
Acc36I	ACCTGC	1 cut(s)	475
AccB1I	GGYRCC	1 cut(s)	742
AccB7I	CCANNNNNTGG	1 cut(s)	407
AciI	CCGC	2 cut(s)	952, 972
AclWI	GGATC	1 cut(s)	678
AcsI	RAATTY	1 cut(s)	748
AcyI	GRCGYC	1 cut(s)	1050
AfaI	GTAC	5 cut(s)	412, 619, 998, 1132, 1281
AfiI	CCNNNNNNNGG	2 cut(s)	407, 926
AgsI	TTSAA	6 cut(s)	18, 636, 753, 967, 1112, 1211
AjiI	CACGTC	1 cut(s)	487
AjuI	GAANNNNNNNTTGG	2 cut(s)	21, 53
AluBI	AGCT	8 cut(s)	242, 248, 716, 731, 794, 856, 868, 1014
AluI	AGCT	8 cut(s)	242, 248, 716, 731, 794, 856, 868, 1014
Alw21I	GWGCWC	2 cut(s)	244, 733
Alw26I	GTCTC	3 cut(s)	174, 366, 477
AlwI	GGATC	1 cut(s)	678
AoxI	GGCC	2 cut(s)	816, 1151
ApeKI	GCWGC	3 cut(s)	716, 806, 872
ApoI	RAATTY	1 cut(s)	748
AspS9I	GGNCC	5 cut(s)	43, 117, 186, 676, 1165
AsuHPI	GGTGA	5 cut(s)	90, 152, 696, 986, 1055
AvaII	GGWCC	5 cut(s)	43, 117, 186, 676, 1165
BanI	GGYRCC	1 cut(s)	742
BanII	GRGCYC	3 cut(s)	65, 244, 733
BauI	CACGAG	2 cut(s)	732, 1289
BbsI	GAAGAC	1 cut(s)	624
Bbv12I	GWGCWC	2 cut(s)	244, 733
BbvCI	CCTCAGC	1 cut(s)	810
BbvI	GCAGC	3 cut(s)	703, 793, 859
BccI	CCATC	9 cut(s)	73, 88, 377, 427, 525, 920, 942, 1075, 1121
BclI	TGATCA	1 cut(s)	622
BcoDI	GTCTC	3 cut(s)	174, 366, 477
BfaI	CTAG	1 cut(s)	69
BfmI	CTRYAG	3 cut(s)	873, 1056, 1072
BfuAI	ACCTGC	1 cut(s)	475
BglII	AGATCT	1 cut(s)	695
BisI	GCNGC	4 cut(s)	717, 807, 873, 953
BlsI	GCNGC	4 cut(s)	718, 808, 874, 954
BmcAI	AGTACT	1 cut(s)	619
Bme18I	GGWCC	5 cut(s)	43, 117, 186, 676, 1165
BmgBI	CACGTC	1 cut(s)	487
BmgT120I	GGNCC	5 cut(s)	43, 117, 186, 676, 1165
BmiI	GGNNCC	7 cut(s)	44, 45, 62, 119, 188, 677, 744
BmsI	GCATC	1 cut(s)	775
BpiI	GAAGAC	1 cut(s)	624
BpmI	CTGGAG	2 cut(s)	18, 906
Bpu10I	CCTNAGC	1 cut(s)	810
BpuEI	CTTGAG	1 cut(s)	228
BsaHI	GRCGYC	1 cut(s)	1050
BsaJI	CCNNGG	3 cut(s)	218, 819, 1168
BsaXI	ACNNNNNCTCC	4 cut(s)	587, 617, 904, 934
Bsc4I	CCNNNNNNNGG	2 cut(s)	407, 926
Bse1I	ACTGG	1 cut(s)	35
BseDI	CCNNGG	3 cut(s)	218, 819, 1168
BseGI	GGATG	3 cut(s)	80, 778, 1067
BseLI	CCNNNNNNNGG	2 cut(s)	407, 926
BseMII	CTCAG	2 cut(s)	801, 906
BseNI	ACTGG	1 cut(s)	35
BseRI	GAGGAG	5 cut(s)	39, 73, 186, 207, 827
BseXI	GCAGC	3 cut(s)	703, 793, 859
BsgI	GTGCAG	1 cut(s)	1271
Bsh1285I	CGRYCG	1 cut(s)	365
BshFI	GGCC	2 cut(s)	818, 1153
BshNI	GGYRCC	1 cut(s)	742
BsiEI	CGRYCG	1 cut(s)	365
BsiHKAI	GWGCWC	2 cut(s)	244, 733
BslFI	GGGAC	5 cut(s)	56, 103, 172, 689, 1037
BslI	CCNNNNNNNGG	2 cut(s)	407, 926
BsmAI	GTCTC	3 cut(s)	174, 366, 477
BsmBI	CGTCTC	2 cut(s)	366, 477
BsmFI	GGGAC	5 cut(s)	56, 103, 172, 689, 1037
BsmI	GAATGC	1 cut(s)	552
BsnI	GGCC	2 cut(s)	818, 1153
Bsp1286I	GDGCHC	3 cut(s)	65, 244, 733
Bsp1407I	TGTACA	1 cut(s)	996
Bsp143I	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
BspACI	CCGC	2 cut(s)	952, 972
BspANI	GGCC	2 cut(s)	818, 1153
BspCNI	CTCAG	2 cut(s)	802, 907
BspLI	GGNNCC	7 cut(s)	44, 45, 62, 119, 188, 677, 744
BspMAI	CTGCAG	1 cut(s)	877
BspMI	ACCTGC	1 cut(s)	475
BspPI	GGATC	1 cut(s)	678
BspQI	GCTCTTC	1 cut(s)	232
BspT107I	GGYRCC	1 cut(s)	742
BsrGI	TGTACA	1 cut(s)	996
BsrI	ACTGG	1 cut(s)	35
BssECI	CCNNGG	3 cut(s)	218, 819, 1168
BssMI	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
BssNI	GRCGYC	1 cut(s)	1050
BssSI	CACGAG	2 cut(s)	732, 1289
BssT1I	CCWWGG	2 cut(s)	819, 1168
Bst2BI	CACGAG	2 cut(s)	732, 1289
Bst4CI	ACNGT	5 cut(s)	231, 363, 512, 617, 1221
Bst6I	CTCTTC	2 cut(s)	232, 364
BstACI	GRCGYC	1 cut(s)	1050
BstAUI	TGTACA	1 cut(s)	996
BstC8I	GCNNGC	4 cut(s)	180, 250, 870, 1079
BstDEI	CTNAG	3 cut(s)	165, 810, 915
BstEII	GGTNACC	1 cut(s)	158
BstF5I	GGATG	3 cut(s)	80, 778, 1067
BstKTI	GATC	7 cut(s)	98, 427, 625, 656, 673, 698, 1063
BstMAI	GTCTC	3 cut(s)	174, 366, 477
BstMBI	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
BstMCI	CGRYCG	1 cut(s)	365
BstMWI	GCNNNNNNNGC	2 cut(s)	815, 824
BstNSI	RCATGY	2 cut(s)	182, 1088
BstPI	GGTNACC	1 cut(s)	158
BstSFI	CTRYAG	3 cut(s)	873, 1056, 1072
BstV1I	GCAGC	3 cut(s)	703, 793, 859
BstV2I	GAAGAC	1 cut(s)	624
BstX2I	RGATCY	1 cut(s)	695
BstXI	CCANNNNNNTGG	1 cut(s)	487
BstYI	RGATCY	1 cut(s)	695
BsuRI	GGCC	2 cut(s)	818, 1153
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	3 cut(s)	80, 778, 1067
BtsIMutI	CAGTG	2 cut(s)	517, 912
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	4 cut(s)	180, 250, 870, 1079
Cfr13I	GGNCC	5 cut(s)	43, 117, 186, 676, 1165
Csp6I	GTAC	5 cut(s)	411, 618, 997, 1131, 1280
CviAII	CATG	5 cut(s)	179, 407, 524, 647, 1085
CviQI	GTAC	5 cut(s)	411, 618, 997, 1131, 1280
DdeI	CTNAG	3 cut(s)	165, 810, 915
DpnI	GATC	7 cut(s)	97, 426, 624, 655, 672, 697, 1062
DpnII	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
Eam1104I	CTCTTC	2 cut(s)	232, 364
EarI	CTCTTC	2 cut(s)	232, 364
Ecl136II	GAGCTC	2 cut(s)	242, 731
Eco130I	CCWWGG	2 cut(s)	819, 1168
Eco147I	AGGCCT	2 cut(s)	818, 1153
Eco24I	GRGCYC	3 cut(s)	65, 244, 733
Eco47I	GGWCC	5 cut(s)	43, 117, 186, 676, 1165
Eco53kI	GAGCTC	2 cut(s)	242, 731
Eco91I	GGTNACC	1 cut(s)	158
EcoICRI	GAGCTC	2 cut(s)	242, 731
EcoO109I	RGGNCCY	3 cut(s)	43, 117, 186
EcoO65I	GGTNACC	1 cut(s)	158
EcoT14I	CCWWGG	2 cut(s)	819, 1168
EcoT38I	GRGCYC	3 cut(s)	65, 244, 733
ErhI	CCWWGG	2 cut(s)	819, 1168
Esp3I	CGTCTC	2 cut(s)	366, 477
FaeI	CATG	5 cut(s)	182, 410, 527, 650, 1088
FaqI	GGGAC	5 cut(s)	56, 103, 172, 689, 1037
FatI	CATG	5 cut(s)	178, 406, 523, 646, 1084
FbaI	TGATCA	1 cut(s)	622
Fnu4HI	GCNGC	4 cut(s)	717, 807, 873, 953
FokI	GGATG	3 cut(s)	67, 785, 1054
FriOI	GRGCYC	3 cut(s)	65, 244, 733
Fsp4HI	GCNGC	4 cut(s)	717, 807, 873, 953
FspBI	CTAG	1 cut(s)	69
GluI	GCNGC	4 cut(s)	717, 807, 873, 953
GsuI	CTGGAG	2 cut(s)	18, 906
HaeIII	GGCC	2 cut(s)	818, 1153
Hin1I	GRCGYC	1 cut(s)	1050
Hin1II	CATG	5 cut(s)	182, 410, 527, 650, 1088
HindIII	AAGCTT	1 cut(s)	866
HinfI	GANTC	2 cut(s)	29, 520
HphI	GGTGA	5 cut(s)	90, 152, 696, 986, 1055
Hpy166II	GTNNAC	1 cut(s)	308
Hpy188I	TCNGA	5 cut(s)	28, 222, 328, 424, 568
Hpy8I	GTNNAC	1 cut(s)	308
HpyAV	CCTTC	8 cut(s)	222, 307, 311, 429, 594, 796, 855, 1032
HpyCH4III	ACNGT	5 cut(s)	231, 363, 512, 617, 1221
HpyCH4IV	ACGT	2 cut(s)	486, 1050
HpyCH4V	TGCA	6 cut(s)	182, 550, 788, 875, 1205, 1288
HpyF10VI	GCNNNNNNNGC	2 cut(s)	815, 824
HpyF3I	CTNAG	3 cut(s)	165, 810, 915
HpySE526I	ACGT	2 cut(s)	486, 1050
Hsp92I	GRCGYC	1 cut(s)	1050
Hsp92II	CATG	5 cut(s)	182, 410, 527, 650, 1088
KflI	GGGWCCC	1 cut(s)	43
Ksp22I	TGATCA	1 cut(s)	622
Kzo9I	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
LguI	GCTCTTC	1 cut(s)	232
LmnI	GCTCC	2 cut(s)	60, 1117
Lsp1109I	GCAGC	3 cut(s)	703, 793, 859
LweI	GCATC	1 cut(s)	775
MaeI	CTAG	1 cut(s)	69
MaeII	ACGT	2 cut(s)	486, 1050
MaeIII	GTNAC	5 cut(s)	8, 158, 281, 475, 1016
MalI	GATC	7 cut(s)	97, 426, 624, 655, 672, 697, 1062
MboI	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
MboII	GAAGA	5 cut(s)	249, 381, 555, 624, 770
MfeI	CAATTG	1 cut(s)	1206
MflI	RGATCY	1 cut(s)	695
MhlI	GDGCHC	3 cut(s)	65, 244, 733
MluCI	AATT	5 cut(s)	498, 748, 1097, 1206, 1303
MseI	TTAA	5 cut(s)	233, 264, 983, 1160, 1194
MslI	CAYNNNNRTG	1 cut(s)	771
MunI	CAATTG	1 cut(s)	1206
Mva1269I	GAATGC	1 cut(s)	552
MwoI	GCNNNNNNNGC	2 cut(s)	815, 824
NdeII	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
NlaIII	CATG	5 cut(s)	182, 410, 527, 650, 1088
NlaIV	GGNNCC	7 cut(s)	44, 45, 62, 119, 188, 677, 744
NmeAIII	GCCGAG	1 cut(s)	1295
NmuCI	GTSAC	1 cut(s)	158
NspI	RCATGY	2 cut(s)	182, 1088
PaeI	GCATGC	1 cut(s)	182
PceI	AGGCCT	2 cut(s)	818, 1153
PciSI	GCTCTTC	1 cut(s)	232
PctI	GAATGC	1 cut(s)	552
PfeI	GAWTC	2 cut(s)	29, 520
PflMI	CCANNNNNTGG	1 cut(s)	407
PkrI	GCNGC	4 cut(s)	718, 808, 874, 954
PpuMI	RGGWCCY	3 cut(s)	43, 117, 186
Psp124BI	GAGCTC	2 cut(s)	244, 733
Psp5II	RGGWCCY	3 cut(s)	43, 117, 186
PspEI	GGTNACC	1 cut(s)	158
PspN4I	GGNNCC	7 cut(s)	44, 45, 62, 119, 188, 677, 744
PspPI	GGNCC	5 cut(s)	43, 117, 186, 676, 1165
PspPPI	RGGWCCY	3 cut(s)	43, 117, 186
PstI	CTGCAG	1 cut(s)	877
PsuI	RGATCY	1 cut(s)	695
RsaI	GTAC	5 cut(s)	412, 619, 998, 1132, 1281
RsaNI	GTAC	5 cut(s)	411, 618, 997, 1131, 1280
RseI	CAYNNNNRTG	1 cut(s)	771
SacI	GAGCTC	2 cut(s)	244, 733
SapI	GCTCTTC	1 cut(s)	232
SaqAI	TTAA	5 cut(s)	233, 264, 983, 1160, 1194
SatI	GCNGC	4 cut(s)	717, 807, 873, 953
Sau3AI	GATC	7 cut(s)	95, 424, 622, 653, 670, 695, 1060
Sau96I	GGNCC	5 cut(s)	43, 117, 186, 676, 1165
ScaI	AGTACT	1 cut(s)	619
SduI	GDGCHC	3 cut(s)	65, 244, 733
SfaNI	GCATC	1 cut(s)	775
SfcI	CTRYAG	3 cut(s)	873, 1056, 1072
SinI	GGWCC	5 cut(s)	43, 117, 186, 676, 1165
SmiMI	CAYNNNNRTG	1 cut(s)	771
SmlI	CTYRAG	1 cut(s)	243
SmoI	CTYRAG	1 cut(s)	243
SphI	GCATGC	1 cut(s)	182
Sse9I	AATT	5 cut(s)	498, 748, 1097, 1206, 1303
SseBI	AGGCCT	2 cut(s)	818, 1153
SsiI	CCGC	2 cut(s)	952, 972
SspMI	CTAG	1 cut(s)	69
SstI	GAGCTC	2 cut(s)	244, 733
StuI	AGGCCT	2 cut(s)	818, 1153
StyI	CCWWGG	2 cut(s)	819, 1168
TaaI	ACNGT	5 cut(s)	231, 363, 512, 617, 1221
TaiI	ACGT	2 cut(s)	489, 1053
TaqI	TCGA	2 cut(s)	106, 427
TasI	AATT	5 cut(s)	498, 748, 1097, 1206, 1303
TatI	WGTACW	3 cut(s)	617, 996, 1279
TauI	GCSGC	1 cut(s)	955
TfiI	GAWTC	2 cut(s)	29, 520
Tru1I	TTAA	5 cut(s)	233, 264, 983, 1160, 1194
Tru9I	TTAA	5 cut(s)	233, 264, 983, 1160, 1194
TscAI	CASTG	2 cut(s)	517, 919
TseFI	GTSAC	1 cut(s)	158
TseI	GCWGC	3 cut(s)	716, 806, 872
Tsp45I	GTSAC	1 cut(s)	158
TspDTI	ATGAA	3 cut(s)	815, 1002, 1242
TspRI	CASTG	2 cut(s)	517, 919
Van91I	CCANNNNNTGG	1 cut(s)	407
VpaK11BI	GGWCC	5 cut(s)	43, 117, 186, 676, 1165
XapI	RAATTY	1 cut(s)	748
XceI	RCATGY	2 cut(s)	182, 1088
XspI	CTAG	1 cut(s)	69
ZraI	GACGTC	1 cut(s)	1051
ZrmI	AGTACT	1 cut(s)	619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.