Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002746

Physical Location & Seq

Genomic Coordinates Forward (+)

15765355 .. 15767152

Gene Structure 1798 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0169600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGGCGAAGAAGGCAGTGCTGATTGGCTGCAACTACCAAGGCACCAAGGCCGAGCTCAAGGGCTGCATTAACGACGTCAAACGCATGTACACCTGCCTCATCGATCGCTACGGCTTTTCCCAGGAGGACATCAATGTTCTGATCGACACAGACGACTCCTACACTCAGCCAACCGGCAAAAACATCCGCAGGGCTATCACCCATCTTATCCGATCTGCCGATTCCGGGGATGTTTTGTTTGTTCACTACAGTGGACATGGGACCCGCCTTCCCGCCGAGACCGGCGATGACGATGACACGGGTTACGACGAGTGCATCGTCCCCACTGACATGAACCTCATCACTGATGATGACTTCAGGGATTTTGTGAACGAGCTGCCGGAGGGTTGCCGGCTGACTATTGTGTCGGATTCGTGCCACAGCGGGGGGCTCATTGATCAATCTATAGAGCAGATAGGCGAAAGCCACAAGGGGCAACAGAGTGAATCTAGCTTCGGTCATGGGATCAAGAACTTTCTGAAGGAGCGCACAGGAGATGCACTCGAGTCTCGTGGAATCCACCTTCCTTCTTCATTTCGCCGCCATGGACGCGATGAGGAAGAGTCTGAGGACAGAGAGATTGACCTTGGAGATGGCGAGTGGGGAAATATCAAGAGCAGAGAGCTGCCACTCTCAACTCTCATAGAGGTGCTCAAGCAGAAAACAGGTAAGACTGATATTGATGTTGGGAAGCTGAGGCCAACACTGTTTGATGTCTTCGGAGATGATGCTAGTCCCAAGGTGAAGAAGTTCATGAAGGTCATCTTGAACAAACTCCAGAACCACGAGGGTGCAGGCAGTGGTGGGTTGATGGGGAAGATAGGAGGCCTGGCTCAAGAGTTTCTTAGACAAAAGCTCGAAGAGAACGAGGAGTATGCAAAGCCGGCTTTAGACACAGAAATGGGTGGCAAGGAAGAGGTTTATGCCGGAGCATCTCGTCGTGCTAGTCCTGACGGCGGGATTCTCATCAGTGGCTGTCAGACGGACCAGACTTCTGCTGATGCCACTCCTTCAGGAGATCCGTCCCAAGCTTATGGAGCTCTTAGTAATGCAATTCAGACCATACTCGCTGAAGAAGGTGGTGAAATATCAAACCAAAGGCTTGTTCACAGGGCAAGGGAGATTCTGAAGGGACAGGGTTACAAGCAGCGACCTGGGCTTTATTGCAGCGACCATCACACCGATGCGCCTTTTGTGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008283 GO:0009507 GO:0009536 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0019222 GO:0031047 GO:0031050 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040008 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048638 GO:0050789 GO:0050793 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

413

Amino Acids

45.26

Weight (kDa)

5.03

Isoelectric Point (pI)

49.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C14	PF00656	3 - 404	6.7e-41	Caspase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24410 AT3G20550
fragaria_vesca	FvH4_3g22101 FvH4_3g22101 FvH4_3g22101 FvH4_3g22101 FvH4_3g22101 FvH4_6g43590
malus_domestica	MD03G1208700.v1.1 MD06G1125500.v1.1 MD11G1223400.v1.1
prunus_persica	Prupe.4G208000_v2.0.a1
pyrus_communis	pycom06g11580 pycom11g19700
rosa_chinensis	RchiOBHm_Chr2g0160171 RchiOBHm_Chr4g0405041 RchiOBHm_Chr5g0037921
rosa_laevigata	RLG00000008882 RLG00000021201 RLG00000033823
rosa_multiflora	Rmu_sc0001744.1_g000004 Rmu_ssc0000241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042940 Rroxscaffold_5G00349230
rosa_rugosa	Rorug04G0052500 Rorug05G0169400 Rorug05G0169500 Rorug05G0169600
rosa_samantha	Rh2BG560700 Rh4AG127600 Rh4BG121300 Rh4CG135400 Rh4DG121700 Rh5AG257700 Rh5BG260500 Rh5CG293100
rosa_wichuraiana	Rw2G045270 Rw4G010330 Rw5G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	101
AasI	GACNNNNNNGTC	1 cut(s)	403
AatII	GACGTC	1 cut(s)	78
Acc36I	ACCTGC	1 cut(s)	101
AccB1I	GGYRCC	1 cut(s)	41
AccII	CGCG	1 cut(s)	591
AciI	CCGC	6 cut(s)	187, 265, 273, 423, 580, 996
AclWI	GGATC	2 cut(s)	512, 1052
AcuI	CTGAAG	5 cut(s)	340, 539, 1035, 1131, 1187
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	1 cut(s)	89
AfiI	CCNNNNNNNGG	3 cut(s)	225, 424, 995
AgsI	TTSAA	1 cut(s)	808
AjnI	CCWGG	3 cut(s)	120, 867, 1192
AjuI	GAANNNNNNNTTGG	2 cut(s)	1128, 1160
AleI	CACNNNNGTG	2 cut(s)	249, 828
AluBI	AGCT	8 cut(s)	55, 376, 492, 664, 733, 895, 1070, 1079
AluI	AGCT	8 cut(s)	55, 376, 492, 664, 733, 895, 1070, 1079
Alw21I	GWGCWC	3 cut(s)	57, 693, 1081
Alw26I	GTCTC	2 cut(s)	272, 552
AlwI	GGATC	2 cut(s)	512, 1052
AlwNI	CAGNNNCTG	1 cut(s)	1014
Ama87I	CYCGRG	1 cut(s)	542
AoxI	GGCC	3 cut(s)	48, 737, 865
ApeKI	GCWGC	6 cut(s)	27, 63, 376, 664, 1186, 1206
Asp700I	GAANNNNTTC	1 cut(s)	788
AspLEI	GCGC	2 cut(s)	528, 1228
AspS9I	GGNCC	2 cut(s)	261, 1024
AsuC2I	CCSGG	1 cut(s)	226
AsuHPI	GGTGA	3 cut(s)	190, 793, 1133
AvaI	CYCGRG	1 cut(s)	542
AvaII	GGWCC	2 cut(s)	261, 1024
BanI	GGYRCC	1 cut(s)	41
BanII	GRGCYC	3 cut(s)	57, 432, 1081
BauI	CACGAG	2 cut(s)	549, 824
BbsI	GAAGAC	1 cut(s)	748
Bbv12I	GWGCWC	3 cut(s)	57, 693, 1081
BbvCI	CCTCAGC	1 cut(s)	734
BbvI	GCAGC	6 cut(s)	14, 50, 363, 651, 1198, 1218
BccI	CCATC	4 cut(s)	210, 626, 844, 1221
BceAI	ACGGC	2 cut(s)	127, 1009
BcgI	CGANNNNNNTGC	2 cut(s)	896, 930
BciT130I	CCWGG	3 cut(s)	122, 869, 1194
BclI	TGATCA	1 cut(s)	436
BcnI	CCSGG	1 cut(s)	226
BcoDI	GTCTC	2 cut(s)	272, 552
BfaI	CTAG	3 cut(s)	489, 771, 984
BfmI	CTRYAG	2 cut(s)	247, 444
BfuAI	ACCTGC	1 cut(s)	101
BisI	GCNGC	7 cut(s)	28, 64, 377, 580, 665, 1187, 1207
BlsI	GCNGC	7 cut(s)	29, 65, 378, 581, 666, 1188, 1208
Bme1390I	CCNGG	4 cut(s)	122, 226, 869, 1194
Bme18I	GGWCC	2 cut(s)	261, 1024
BmeT110I	CYCGRG	1 cut(s)	542
BmgT120I	GGNCC	2 cut(s)	261, 1024
BmiI	GGNNCC	3 cut(s)	43, 262, 263
BmrFI	CCNGG	4 cut(s)	122, 226, 869, 1194
BmsI	GCATC	6 cut(s)	324, 526, 757, 980, 1030, 1213
BpiI	GAAGAC	1 cut(s)	748
BplI	GAGNNNNNCTC	2 cut(s)	525, 557
BpmI	CTGGAG	1 cut(s)	800
Bpu10I	CCTNAGC	1 cut(s)	734
BpuEI	CTTGAG	3 cut(s)	41, 677, 858
BpuMI	CCSGG	1 cut(s)	226
Bsa29I	ATCGAT	1 cut(s)	102
BsaBI	GATNNNNATC	1 cut(s)	1004
BsaHI	GRCGYC	1 cut(s)	75
BsaI	GGTCTC	1 cut(s)	272
BsaJI	CCNNGG	8 cut(s)	37, 45, 120, 225, 583, 625, 777, 1193
Bsc4I	CCNNNNNNNGG	3 cut(s)	225, 424, 995
Bse118I	RCCGGY	4 cut(s)	173, 281, 390, 922
Bse8I	GATNNNNATC	1 cut(s)	1004
BseBI	CCWGG	3 cut(s)	122, 869, 1194
BseCI	ATCGAT	1 cut(s)	102
BseDI	CCNNGG	8 cut(s)	37, 45, 120, 225, 583, 625, 777, 1193
BseGI	GGATG	2 cut(s)	183, 235
BseJI	GATNNNNATC	1 cut(s)	1004
BseLI	CCNNNNNNNGG	3 cut(s)	225, 424, 995
BseMII	CTCAG	3 cut(s)	179, 597, 725
BseRI	GAGGAG	1 cut(s)	923
BseXI	GCAGC	6 cut(s)	14, 50, 363, 651, 1198, 1218
BsgI	GTGCAG	1 cut(s)	852
Bsh1236I	CGCG	1 cut(s)	591
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	3 cut(s)	50, 739, 867
BshNI	GGYRCC	1 cut(s)	41
BshVI	ATCGAT	1 cut(s)	102
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	3 cut(s)	57, 693, 1081
BsiHKCI	CYCGRG	1 cut(s)	542
BsiSI	CCGG	7 cut(s)	174, 225, 282, 380, 391, 923, 966
BslFI	GGGAC	5 cut(s)	274, 305, 759, 1048, 1185
BslI	CCNNNNNNNGG	3 cut(s)	225, 424, 995
BsmAI	GTCTC	2 cut(s)	272, 552
BsmFI	GGGAC	5 cut(s)	274, 305, 759, 1048, 1185
BsnI	GGCC	3 cut(s)	50, 739, 867
Bso31I	GGTCTC	1 cut(s)	272
BsoBI	CYCGRG	1 cut(s)	542
Bsp1286I	GDGCHC	4 cut(s)	57, 432, 693, 1081
Bsp1407I	TGTACA	1 cut(s)	87
Bsp143I	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
Bsp19I	CCATGG	1 cut(s)	583
BspACI	CCGC	6 cut(s)	187, 265, 273, 423, 580, 996
BspANI	GGCC	3 cut(s)	50, 739, 867
BspCNI	CTCAG	3 cut(s)	178, 598, 726
BspDI	ATCGAT	1 cut(s)	102
BspFNI	CGCG	1 cut(s)	591
BspHI	TCATGA	1 cut(s)	792
BspLI	GGNNCC	3 cut(s)	43, 262, 263
BspMI	ACCTGC	1 cut(s)	101
BspPI	GGATC	2 cut(s)	512, 1052
BspT107I	GGYRCC	1 cut(s)	41
BspTNI	GGTCTC	1 cut(s)	272
BsrFI	RCCGGY	4 cut(s)	173, 281, 390, 922
BsrGI	TGTACA	1 cut(s)	87
BssAI	RCCGGY	4 cut(s)	173, 281, 390, 922
BssECI	CCNNGG	8 cut(s)	37, 45, 120, 225, 583, 625, 777, 1193
BssMI	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
BssNI	GRCGYC	1 cut(s)	75
BssSI	CACGAG	2 cut(s)	549, 824
BssT1I	CCWWGG	5 cut(s)	37, 45, 583, 625, 777
Bst2BI	CACGAG	2 cut(s)	549, 824
Bst2UI	CCWGG	3 cut(s)	122, 869, 1194
Bst4CI	ACNGT	2 cut(s)	251, 747
Bst6I	CTCTTC	3 cut(s)	594, 894, 948
BstACI	GRCGYC	1 cut(s)	75
BstAUI	TGTACA	1 cut(s)	87
BstC8I	GCNNGC	3 cut(s)	392, 835, 924
BstDEI	CTNAG	5 cut(s)	165, 606, 734, 884, 1082
BstDSI	CCRYGG	1 cut(s)	583
BstF5I	GGATG	2 cut(s)	183, 235
BstFNI	CGCG	1 cut(s)	591
BstHHI	GCGC	2 cut(s)	528, 1228
BstKTI	GATC	6 cut(s)	106, 144, 215, 439, 507, 1060
BstMAI	GTCTC	2 cut(s)	272, 552
BstMBI	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 588, 923, 1076, 1195
BstNI	CCWGG	3 cut(s)	122, 869, 1194
BstNSI	RCATGY	1 cut(s)	88
BstSCI	CCNGG	4 cut(s)	120, 224, 867, 1192
BstSFI	CTRYAG	2 cut(s)	247, 444
BstUI	CGCG	1 cut(s)	591
BstV1I	GCAGC	6 cut(s)	14, 50, 363, 651, 1198, 1218
BstV2I	GAAGAC	1 cut(s)	748
BstX2I	RGATCY	1 cut(s)	1057
BstXI	CCANNNNNNTGG	1 cut(s)	1073
BstYI	RGATCY	1 cut(s)	1057
Bsu15I	ATCGAT	1 cut(s)	102
BsuRI	GGCC	3 cut(s)	50, 739, 867
BsuTUI	ATCGAT	1 cut(s)	102
BtgI	CCRYGG	1 cut(s)	583
BtgZI	GCGATG	2 cut(s)	300, 606
BtsCI	GGATG	2 cut(s)	183, 235
BtsI	GCAGTG	2 cut(s)	21, 844
BtsIMutI	CAGTG	7 cut(s)	21, 256, 324, 342, 743, 844, 1015
BveI	ACCTGC	1 cut(s)	101
Cac8I	GCNNGC	3 cut(s)	392, 835, 924
CaiI	CAGNNNCTG	1 cut(s)	1014
CciI	TCATGA	1 cut(s)	792
CfoI	GCGC	2 cut(s)	528, 1228
Cfr10I	RCCGGY	4 cut(s)	173, 281, 390, 922
Cfr13I	GGNCC	2 cut(s)	261, 1024
ClaI	ATCGAT	1 cut(s)	102
CseI	GACGC	1 cut(s)	597
Csp6I	GTAC	1 cut(s)	88
CviAII	CATG	6 cut(s)	85, 257, 331, 500, 584, 793
CviQI	GTAC	1 cut(s)	88
DdeI	CTNAG	5 cut(s)	165, 606, 734, 884, 1082
DpnI	GATC	6 cut(s)	105, 143, 214, 438, 506, 1059
DpnII	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
DrdI	GACNNNNNNGTC	1 cut(s)	403
DseDI	GACNNNNNNGTC	1 cut(s)	403
Eam1104I	CTCTTC	3 cut(s)	594, 894, 948
EarI	CTCTTC	3 cut(s)	594, 894, 948
Ecl136II	GAGCTC	2 cut(s)	55, 1079
Eco130I	CCWWGG	5 cut(s)	37, 45, 583, 625, 777
Eco147I	AGGCCT	1 cut(s)	867
Eco24I	GRGCYC	3 cut(s)	57, 432, 1081
Eco31I	GGTCTC	1 cut(s)	272
Eco47I	GGWCC	2 cut(s)	261, 1024
Eco53kI	GAGCTC	2 cut(s)	55, 1079
Eco57I	CTGAAG	5 cut(s)	340, 539, 1035, 1131, 1187
Eco88I	CYCGRG	1 cut(s)	542
EcoICRI	GAGCTC	2 cut(s)	55, 1079
EcoO109I	RGGNCCY	1 cut(s)	261
EcoRII	CCWGG	3 cut(s)	120, 867, 1192
EcoT14I	CCWWGG	5 cut(s)	37, 45, 583, 625, 777
EcoT38I	GRGCYC	3 cut(s)	57, 432, 1081
ErhI	CCWWGG	5 cut(s)	37, 45, 583, 625, 777
FaeI	CATG	6 cut(s)	88, 260, 334, 503, 587, 796
FalI	AAGNNNNNCTT	4 cut(s)	788, 820, 867, 899
FaqI	GGGAC	5 cut(s)	274, 305, 759, 1048, 1185
FatI	CATG	6 cut(s)	84, 256, 330, 499, 583, 792
FauI	CCCGC	4 cut(s)	272, 280, 416, 989
FbaI	TGATCA	1 cut(s)	436
Fnu4HI	GCNGC	7 cut(s)	28, 64, 377, 580, 665, 1187, 1207
FokI	GGATG	2 cut(s)	170, 242
FriOI	GRGCYC	3 cut(s)	57, 432, 1081
Fsp4HI	GCNGC	7 cut(s)	28, 64, 377, 580, 665, 1187, 1207
FspBI	CTAG	3 cut(s)	489, 771, 984
GlaI	GCGC	2 cut(s)	527, 1227
GluI	GCNGC	7 cut(s)	28, 64, 377, 580, 665, 1187, 1207
GsuI	CTGGAG	1 cut(s)	800
HaeIII	GGCC	3 cut(s)	50, 739, 867
HapII	CCGG	7 cut(s)	174, 225, 282, 380, 391, 923, 966
HgaI	GACGC	1 cut(s)	597
HhaI	GCGC	2 cut(s)	528, 1228
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	6 cut(s)	88, 260, 334, 503, 587, 796
Hin6I	GCGC	2 cut(s)	526, 1226
HinP1I	GCGC	2 cut(s)	526, 1226
HindIII	AAGCTT	1 cut(s)	1068
HinfI	GANTC	9 cut(s)	155, 221, 410, 485, 545, 555, 602, 1000, 1162
HpaII	CCGG	7 cut(s)	174, 225, 282, 380, 391, 923, 966
HphI	GGTGA	3 cut(s)	190, 793, 1133
Hpy166II	GTNNAC	5 cut(s)	90, 244, 254, 370, 1147
Hpy188I	TCNGA	9 cut(s)	141, 212, 409, 519, 607, 761, 1020, 1098, 1167
Hpy188III	TCNNGA	8 cut(s)	508, 652, 793, 805, 817, 875, 989, 1053
Hpy8I	GTNNAC	5 cut(s)	90, 244, 254, 370, 1147
Hpy99I	CGWCG	3 cut(s)	77, 311, 981
HpyAV	CCTTC	9 cut(s)	4, 278, 514, 572, 576, 790, 1059, 1109, 1162
HpyCH4III	ACNGT	2 cut(s)	251, 747
HpyCH4IV	ACGT	1 cut(s)	75
HpyCH4V	TGCA	8 cut(s)	30, 66, 315, 539, 833, 917, 1091, 1206
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 588, 923, 1076, 1195
HpyF3I	CTNAG	5 cut(s)	165, 606, 734, 884, 1082
HpySE526I	ACGT	1 cut(s)	75
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	6 cut(s)	88, 260, 334, 503, 587, 796
HspAI	GCGC	2 cut(s)	526, 1226
KflI	GGGWCCC	1 cut(s)	261
KroI	GCCGGC	2 cut(s)	390, 922
KroNI	GCCGGC	2 cut(s)	392, 924
Ksp22I	TGATCA	1 cut(s)	436
Kzo9I	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
LmnI	GCTCC	3 cut(s)	523, 968, 1076
Lsp1109I	GCAGC	6 cut(s)	14, 50, 363, 651, 1198, 1218
LweI	GCATC	6 cut(s)	324, 526, 757, 980, 1030, 1213
MaeI	CTAG	3 cut(s)	489, 771, 984
MaeII	ACGT	1 cut(s)	75
MaeIII	GTNAC	2 cut(s)	302, 1178
MalI	GATC	6 cut(s)	105, 143, 214, 438, 506, 1059
MboI	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
MboII	GAAGA	9 cut(s)	19, 561, 611, 748, 796, 868, 911, 965, 1124
MflI	RGATCY	1 cut(s)	1057
MhlI	GDGCHC	4 cut(s)	57, 432, 693, 1081
MluCI	AATT	1 cut(s)	1092
MlyI	GAGTC	3 cut(s)	149, 554, 611
MmeI	TCCRAC	1 cut(s)	387
MroNI	GCCGGC	2 cut(s)	390, 922
MroXI	GAANNNNTTC	1 cut(s)	788
MseI	TTAA	1 cut(s)	69
MslI	CAYNNNNRTG	6 cut(s)	249, 329, 686, 828, 938, 1221
MspA1I	CMGCKG	1 cut(s)	423
MspI	CCGG	7 cut(s)	174, 225, 282, 380, 391, 923, 966
MspR9I	CCNGG	4 cut(s)	122, 226, 869, 1194
MvaI	CCWGG	3 cut(s)	122, 869, 1194
MvnI	CGCG	1 cut(s)	591
MwoI	GCNNNNNNNGC	5 cut(s)	11, 588, 923, 1076, 1195
NaeI	GCCGGC	2 cut(s)	392, 924
NciI	CCSGG	1 cut(s)	226
NcoI	CCATGG	1 cut(s)	583
NdeII	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
NgoMIV	GCCGGC	2 cut(s)	390, 922
NlaIII	CATG	6 cut(s)	88, 260, 334, 503, 587, 796
NlaIV	GGNNCC	3 cut(s)	43, 262, 263
NmeAIII	GCCGAG	2 cut(s)	76, 301
NspI	RCATGY	1 cut(s)	88
OliI	CACNNNNGTG	2 cut(s)	249, 828
PaeR7I	CTCGAG	1 cut(s)	542
PagI	TCATGA	1 cut(s)	792
PaqCI	CACCTGC	1 cut(s)	101
PceI	AGGCCT	1 cut(s)	867
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 315, 903
PdiI	GCCGGC	2 cut(s)	392, 924
PdmI	GAANNNNTTC	1 cut(s)	788
PfeI	GAWTC	6 cut(s)	221, 410, 485, 555, 1000, 1162
PkrI	GCNGC	7 cut(s)	29, 65, 378, 581, 666, 1188, 1208
Ple19I	CGATCG	1 cut(s)	106
PleI	GAGTC	3 cut(s)	149, 553, 610
PpsI	GAGTC	3 cut(s)	149, 553, 610
PpuMI	RGGWCCY	1 cut(s)	261
Psp124BI	GAGCTC	2 cut(s)	57, 1081
Psp5II	RGGWCCY	1 cut(s)	261
Psp6I	CCWGG	3 cut(s)	120, 867, 1192
PspGI	CCWGG	3 cut(s)	120, 867, 1192
PspN4I	GGNNCC	3 cut(s)	43, 262, 263
PspPI	GGNCC	2 cut(s)	261, 1024
PspPPI	RGGWCCY	1 cut(s)	261
PspXI	VCTCGAGB	1 cut(s)	542
PstNI	CAGNNNCTG	1 cut(s)	1014
PsuI	RGATCY	1 cut(s)	1057
PvuI	CGATCG	1 cut(s)	106
RsaI	GTAC	1 cut(s)	89
RsaNI	GTAC	1 cut(s)	88
RseI	CAYNNNNRTG	6 cut(s)	249, 329, 686, 828, 938, 1221
SacI	GAGCTC	2 cut(s)	57, 1081
SaqAI	TTAA	1 cut(s)	69
SatI	GCNGC	7 cut(s)	28, 64, 377, 580, 665, 1187, 1207
Sau3AI	GATC	6 cut(s)	103, 141, 212, 436, 504, 1057
Sau96I	GGNCC	2 cut(s)	261, 1024
SchI	GAGTC	3 cut(s)	149, 554, 611
ScrFI	CCNGG	4 cut(s)	122, 226, 869, 1194
SduI	GDGCHC	4 cut(s)	57, 432, 693, 1081
SfaNI	GCATC	6 cut(s)	324, 526, 757, 980, 1030, 1213
SfcI	CTRYAG	2 cut(s)	247, 444
Sfr274I	CTCGAG	1 cut(s)	542
SinI	GGWCC	2 cut(s)	261, 1024
SlaI	CTCGAG	1 cut(s)	542
SmiMI	CAYNNNNRTG	6 cut(s)	249, 329, 686, 828, 938, 1221
SmlI	CTYRAG	4 cut(s)	56, 542, 692, 873
SmoI	CTYRAG	4 cut(s)	56, 542, 692, 873
Sse9I	AATT	1 cut(s)	1092
SseBI	AGGCCT	1 cut(s)	867
SsiI	CCGC	6 cut(s)	187, 265, 273, 423, 580, 996
SspMI	CTAG	3 cut(s)	489, 771, 984
SstI	GAGCTC	2 cut(s)	57, 1081
StuI	AGGCCT	1 cut(s)	867
StyD4I	CCNGG	4 cut(s)	120, 224, 867, 1192
StyI	CCWWGG	5 cut(s)	37, 45, 583, 625, 777
TaaI	ACNGT	2 cut(s)	251, 747
TaiI	ACGT	1 cut(s)	78
TaqI	TCGA	4 cut(s)	102, 144, 543, 897
TaqII	GACCGA	1 cut(s)	485
TasI	AATT	1 cut(s)	1092
TatI	WGTACW	1 cut(s)	87
TauI	GCSGC	1 cut(s)	582
TfiI	GAWTC	6 cut(s)	221, 410, 485, 555, 1000, 1162
Tru1I	TTAA	1 cut(s)	69
Tru9I	TTAA	1 cut(s)	69
TscAI	CASTG	7 cut(s)	21, 256, 331, 349, 750, 844, 1015
TseI	GCWGC	6 cut(s)	27, 63, 376, 664, 1186, 1206
TspDTI	ATGAA	4 cut(s)	347, 561, 781, 809
TspGWI	ACGGA	2 cut(s)	1037, 1050
TspRI	CASTG	7 cut(s)	21, 256, 331, 349, 750, 844, 1015
VpaK11BI	GGWCC	2 cut(s)	261, 1024
XceI	RCATGY	1 cut(s)	88
XhoI	CTCGAG	1 cut(s)	542
XmnI	GAANNNNTTC	1 cut(s)	788
XspI	CTAG	3 cut(s)	489, 771, 984
ZraI	GACGTC	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.