Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0001260

Physical Location & Seq

Genomic Coordinates Reverse (-)

14875549 .. 14877332

Gene Structure 1784 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G232100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 891 bp

ATGCCGAGTGAAAACCAAGAGCAATCTGACAAAGAACCGTTCGTCGAAATCGACCCCTCGGGGCGATACGGGCGGTACAACGAGCTCCTAGGGTGCGGTGCAGTGAAGAAGGTGTACCGGGCGTTTGATCAAGAAGATGGCATAGAGGTGGCATGGAACCAAGTCAAGCTACGTAACTTCACCAATGACCCTGCCATGATCGAACGGCTCTACGCCGAGGTTGGGTTGCTGAGATCCCTGGCAGACAAGAACATCATCACCTTGTATAATGTGTGGCGGGACGCAGAGAATAACACCCTCAATTTCATGACAGAAGTTTGTACAAATGGGAATCTGAGGGACTATAGGAAGAAGCATAAGCATGTTTCATTGATAGCCTTGAAGAAGTGGTCAAAGCAGATCTTGAAAGGGCTTGAGTATTTGCATACTCATGAGCCTTGTGTTATCCACAGAGATCTCAATTGCAGCAATGTCTTTATCAACGGGAATATTGGCCAGGTGAAGATTGGTGATTTGGGATTGGCTGCAATTGTGGGGAAGAACCATTCAGCGCATTCAGTGTTAGGGACTCCAGAATTTATGGCACCAGAGCTATATGAAGAGGACTACACTGAAATGGTGGACATATACTCATTTGGGATGTGTGTGCTAGAGATGGTGACCTTGGAAATTCCCTACAGTGAATGTGACAATGTTGTCAAAATATACAAAAAGGTAACCTCTGGGGTAAGACCCCAATCCTTGAACAAGGTCGAGGACCCAGAGGTGAAGGCATTTGTTGAGAAGTGCCTCGCCCAACCTAGGGCTAGGCCTTCTGCCACTGAACTTCTCAACGATCCATTTTTTGATGAAGTCGAAGAGGATGATAATGAAGAAAATGTTTACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

297

Amino Acids

33.79

Weight (kDa)

4.99

Isoelectric Point (pI)

39.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55560
fragaria_vesca	FvH4_3g22150 FvH4_6g41240
malus_domestica	MD03G1189000.v1.1 MD09G1121400.v1.1 MD11G1205200.v1.1 MD17G1112400.v1.1
prunus_persica	Prupe.3G202300_v2.0.a1 Prupe.3G202300_v2.0.a1 Prupe.3G202300_v2.0.a1 Prupe.3G202300_v2.0.a1 Prupe.3G202300_v2.0.a1 Prupe.3G202300_v2.0.a1 Prupe.4G232100_v2.0.a1 Prupe.4G232100_v2.0.a1
pyrus_communis	pycom03g14190 pycom03g14210 pycom09g04580 pycom11g17800 pycom17g10410
rosa_chinensis	RchiOBHm_Chr2g0156791 RchiOBHm_Chr5g0038001 RchiOBHm_Chr5g0038041 RchiOBHm_Chr5g0042541
rosa_laevigata	RLG00000020942 RLG00000034135
rosa_multiflora	Rmu_co8331393.1_g000001 Rmu_co8390513.1_g000001 Rmu_sc0002670.1_g000011 Rmu_sc0008149.1_g000008 Rmu_sc0008278.1_g000004
rosa_roxburghii	Rroxscaffold_1G00038120 Rroxscaffold_1G00042890 Rroxscaffold_2G00092720
rosa_rugosa	Rorug02G0456200 Rorug05G0170100 Rorug05G0201300 Rorug05G0201400
rosa_samantha	Rh2AG521800 Rh2BG535200 Rh2CG506700 Rh2DG544200 Rh5BG261300 Rh5BG261600 Rh5BG291700 Rh5CG293600 Rh5CG323900 Rh5DG270500 Rh5DG270600 Rh5DG301500
rosa_wichuraiana	Rw2G043080 Rw5G023930 Rw5G024110 Rw5G024140 Rw5G026670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	695
AccB1I	GGYRCC	1 cut(s)	583
AciI	CCGC	3 cut(s)	73, 96, 277
AclWI	GGATC	2 cut(s)	228, 830
AcoI	YGGCCR	1 cut(s)	493
AcsI	RAATTY	2 cut(s)	575, 669
AfaI	GTAC	3 cut(s)	77, 116, 322
AfiI	CCNNNNNNNGG	3 cut(s)	222, 801, 802
AgsI	TTSAA	3 cut(s)	382, 406, 745
AjnI	CCWGG	2 cut(s)	237, 495
AluBI	AGCT	3 cut(s)	85, 169, 592
AluI	AGCT	3 cut(s)	85, 169, 592
Alw21I	GWGCWC	1 cut(s)	87
AlwI	GGATC	2 cut(s)	228, 830
Ama87I	CYCGRG	1 cut(s)	58
AoxI	GGCC	2 cut(s)	493, 809
ApeKI	GCWGC	2 cut(s)	465, 524
ApoI	RAATTY	2 cut(s)	575, 669
AspA2I	CCTAGG	2 cut(s)	88, 800
AspLEI	GCGC	1 cut(s)	553
AspS9I	GGNCC	1 cut(s)	757
AsuC2I	CCSGG	1 cut(s)	119
AsuHPI	GGTGA	6 cut(s)	172, 250, 511, 521, 670, 778
AvaI	CYCGRG	1 cut(s)	58
AvaII	GGWCC	1 cut(s)	757
AvrII	CCTAGG	2 cut(s)	88, 800
BalI	TGGCCA	1 cut(s)	495
BanI	GGYRCC	1 cut(s)	583
BanII	GRGCYC	1 cut(s)	87
BarI	GAAGNNNNNNTAC	2 cut(s)	98, 130
Bbv12I	GWGCWC	1 cut(s)	87
BbvI	GCAGC	2 cut(s)	477, 511
BccI	CCATC	2 cut(s)	131, 649
BceAI	ACGGC	1 cut(s)	221
BciT130I	CCWGG	2 cut(s)	239, 497
BclI	TGATCA	1 cut(s)	127
BcnI	CCSGG	1 cut(s)	119
BfaI	CTAG	4 cut(s)	89, 650, 801, 807
BfmI	CTRYAG	2 cut(s)	343, 676
BglII	AGATCT	2 cut(s)	399, 454
BisI	GCNGC	2 cut(s)	466, 525
BlnI	CCTAGG	2 cut(s)	88, 800
BlsI	GCNGC	2 cut(s)	467, 526
Bme1390I	CCNGG	3 cut(s)	119, 239, 497
Bme18I	GGWCC	1 cut(s)	757
BmeT110I	CYCGRG	1 cut(s)	58
BmgT120I	GGNCC	1 cut(s)	757
BmiI	GGNNCC	3 cut(s)	158, 585, 759
BmrFI	CCNGG	3 cut(s)	119, 239, 497
BpmI	CTGGAG	1 cut(s)	555
BpuEI	CTTGAG	1 cut(s)	434
BpuMI	CCSGG	1 cut(s)	119
BsaAI	YACGTR	1 cut(s)	173
BsaJI	CCNNGG	6 cut(s)	57, 88, 216, 237, 663, 800
Bsc4I	CCNNNNNNNGG	3 cut(s)	222, 801, 802
Bse3DI	GCAATG	1 cut(s)	475
BseBI	CCWGG	2 cut(s)	239, 497
BseDI	CCNNGG	6 cut(s)	57, 88, 216, 237, 663, 800
BseGI	GGATG	2 cut(s)	645, 868
BseLI	CCNNNNNNNGG	3 cut(s)	222, 801, 802
BseMI	GCAATG	1 cut(s)	475
BseMII	CTCAG	2 cut(s)	221, 326
BseXI	GCAGC	2 cut(s)	477, 511
BsgI	GTGCAG	1 cut(s)	120
BshFI	GGCC	2 cut(s)	495, 811
BshNI	GGYRCC	1 cut(s)	583
BsiHKAI	GWGCWC	1 cut(s)	87
BsiHKCI	CYCGRG	1 cut(s)	58
BsiSI	CCGG	1 cut(s)	118
BslFI	GGGAC	3 cut(s)	293, 353, 580
BslI	CCNNNNNNNGG	3 cut(s)	222, 801, 802
BsmFI	GGGAC	3 cut(s)	293, 353, 580
BsmI	GAATGC	1 cut(s)	553
BsnI	GGCC	2 cut(s)	495, 811
BsoBI	CYCGRG	1 cut(s)	58
Bsp1286I	GDGCHC	1 cut(s)	87
Bsp1407I	TGTACA	1 cut(s)	320
Bsp143I	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
BspACI	CCGC	3 cut(s)	73, 96, 277
BspANI	GGCC	2 cut(s)	495, 811
BspCNI	CTCAG	2 cut(s)	222, 327
BspHI	TCATGA	2 cut(s)	306, 430
BspLI	GGNNCC	3 cut(s)	158, 585, 759
BspPI	GGATC	2 cut(s)	228, 830
BspT107I	GGYRCC	1 cut(s)	583
BsrDI	GCAATG	1 cut(s)	475
BsrGI	TGTACA	1 cut(s)	320
BssECI	CCNNGG	6 cut(s)	57, 88, 216, 237, 663, 800
BssMI	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
BssT1I	CCWWGG	3 cut(s)	88, 663, 800
Bst2UI	CCWGG	2 cut(s)	239, 497
Bst4CI	ACNGT	2 cut(s)	39, 680
Bst6I	CTCTTC	2 cut(s)	594, 852
BstAUI	TGTACA	1 cut(s)	320
BstBAI	YACGTR	1 cut(s)	173
BstDEI	CTNAG	2 cut(s)	230, 335
BstEII	GGTNACC	2 cut(s)	658, 715
BstF5I	GGATG	2 cut(s)	645, 868
BstHHI	GCGC	1 cut(s)	553
BstKTI	GATC	6 cut(s)	130, 201, 236, 402, 457, 838
BstMBI	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
BstMWI	GCNNNNNNNGC	1 cut(s)	70
BstNI	CCWGG	2 cut(s)	239, 497
BstNSI	RCATGY	1 cut(s)	365
BstPI	GGTNACC	2 cut(s)	658, 715
BstSCI	CCNGG	3 cut(s)	117, 237, 495
BstSFI	CTRYAG	2 cut(s)	343, 676
BstSNI	TACGTA	1 cut(s)	173
BstV1I	GCAGC	2 cut(s)	477, 511
BstX2I	RGATCY	3 cut(s)	233, 399, 454
BstYI	RGATCY	3 cut(s)	233, 399, 454
BsuRI	GGCC	2 cut(s)	495, 811
BtsCI	GGATG	2 cut(s)	645, 868
BtsI	GCAGTG	1 cut(s)	108
BtsIMutI	CAGTG	5 cut(s)	108, 564, 609, 685, 819
CciI	TCATGA	2 cut(s)	306, 430
CfoI	GCGC	1 cut(s)	553
Cfr13I	GGNCC	1 cut(s)	757
CseI	GACGC	1 cut(s)	290
Csp6I	GTAC	3 cut(s)	76, 115, 321
CviAII	CATG	5 cut(s)	153, 196, 307, 362, 431
CviQI	GTAC	3 cut(s)	76, 115, 321
DdeI	CTNAG	2 cut(s)	230, 335
DpnI	GATC	6 cut(s)	129, 200, 235, 401, 456, 837
DpnII	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
DrdI	GACNNNNNNGTC	1 cut(s)	695
DseDI	GACNNNNNNGTC	1 cut(s)	695
EaeI	YGGCCR	1 cut(s)	493
Eam1104I	CTCTTC	2 cut(s)	594, 852
EarI	CTCTTC	2 cut(s)	594, 852
Ecl136II	GAGCTC	1 cut(s)	85
Eco105I	TACGTA	1 cut(s)	173
Eco130I	CCWWGG	3 cut(s)	88, 663, 800
Eco147I	AGGCCT	1 cut(s)	811
Eco24I	GRGCYC	1 cut(s)	87
Eco47I	GGWCC	1 cut(s)	757
Eco53kI	GAGCTC	1 cut(s)	85
Eco88I	CYCGRG	1 cut(s)	58
Eco91I	GGTNACC	2 cut(s)	658, 715
EcoICRI	GAGCTC	1 cut(s)	85
EcoO109I	RGGNCCY	1 cut(s)	757
EcoO65I	GGTNACC	2 cut(s)	658, 715
EcoRII	CCWGG	2 cut(s)	237, 495
EcoT14I	CCWWGG	3 cut(s)	88, 663, 800
EcoT38I	GRGCYC	1 cut(s)	87
ErhI	CCWWGG	3 cut(s)	88, 663, 800
FaeI	CATG	5 cut(s)	156, 199, 310, 365, 434
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	3 cut(s)	293, 353, 580
FatI	CATG	5 cut(s)	152, 195, 306, 361, 430
FauI	CCCGC	1 cut(s)	270
FbaI	TGATCA	1 cut(s)	127
Fnu4HI	GCNGC	2 cut(s)	466, 525
FokI	GGATG	2 cut(s)	652, 875
FriOI	GRGCYC	1 cut(s)	87
Fsp4HI	GCNGC	2 cut(s)	466, 525
FspBI	CTAG	4 cut(s)	89, 650, 801, 807
GlaI	GCGC	1 cut(s)	552
GluI	GCNGC	2 cut(s)	466, 525
GsuI	CTGGAG	1 cut(s)	555
HaeIII	GGCC	2 cut(s)	495, 811
HapII	CCGG	1 cut(s)	118
HgaI	GACGC	1 cut(s)	290
HhaI	GCGC	1 cut(s)	553
Hin1II	CATG	5 cut(s)	156, 199, 310, 365, 434
Hin6I	GCGC	1 cut(s)	551
HinP1I	GCGC	1 cut(s)	551
HinfI	GANTC	2 cut(s)	331, 568
HpaII	CCGG	1 cut(s)	118
HphI	GGTGA	6 cut(s)	172, 250, 511, 521, 670, 778
Hpy166II	GTNNAC	3 cut(s)	115, 622, 883
Hpy188I	TCNGA	2 cut(s)	28, 336
Hpy188III	TCNNGA	6 cut(s)	131, 307, 403, 431, 572, 888
Hpy8I	GTNNAC	3 cut(s)	115, 622, 883
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	3 cut(s)	103, 763, 822
HpyCH4III	ACNGT	2 cut(s)	39, 680
HpyCH4IV	ACGT	1 cut(s)	172
HpyCH4V	TGCA	4 cut(s)	101, 424, 465, 527
HpyF10VI	GCNNNNNNNGC	1 cut(s)	70
HpyF3I	CTNAG	2 cut(s)	230, 335
HpySE526I	ACGT	1 cut(s)	172
Hsp92II	CATG	5 cut(s)	156, 199, 310, 365, 434
HspAI	GCGC	1 cut(s)	551
Ksp22I	TGATCA	1 cut(s)	127
Kzo9I	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
LmnI	GCTCC	1 cut(s)	90
Lsp1109I	GCAGC	2 cut(s)	477, 511
MaeI	CTAG	4 cut(s)	89, 650, 801, 807
MaeII	ACGT	1 cut(s)	172
MaeIII	GTNAC	4 cut(s)	173, 658, 686, 715
MalI	GATC	6 cut(s)	129, 200, 235, 401, 456, 837
MboI	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
MboII	GAAGA	9 cut(s)	118, 146, 361, 394, 514, 550, 611, 869, 884
MfeI	CAATTG	2 cut(s)	460, 528
MflI	RGATCY	3 cut(s)	233, 399, 454
MhlI	GDGCHC	1 cut(s)	87
MlsI	TGGCCA	1 cut(s)	495
MluCI	AATT	5 cut(s)	301, 460, 528, 575, 669
MluNI	TGGCCA	1 cut(s)	495
MlyI	GAGTC	1 cut(s)	562
Mox20I	TGGCCA	1 cut(s)	495
MscI	TGGCCA	1 cut(s)	495
MslI	CAYNNNNRTG	4 cut(s)	146, 360, 429, 614
Msp20I	TGGCCA	1 cut(s)	495
MspI	CCGG	1 cut(s)	118
MspR9I	CCNGG	3 cut(s)	119, 239, 497
MunI	CAATTG	2 cut(s)	460, 528
Mva1269I	GAATGC	1 cut(s)	553
MvaI	CCWGG	2 cut(s)	239, 497
MwoI	GCNNNNNNNGC	1 cut(s)	70
NciI	CCSGG	1 cut(s)	119
NdeII	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
NlaIII	CATG	5 cut(s)	156, 199, 310, 365, 434
NlaIV	GGNNCC	3 cut(s)	158, 585, 759
NmeAIII	GCCGAG	2 cut(s)	30, 241
NmuCI	GTSAC	2 cut(s)	658, 686
NspI	RCATGY	1 cut(s)	365
PagI	TCATGA	2 cut(s)	306, 430
PceI	AGGCCT	1 cut(s)	811
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	1 cut(s)	553
PfeI	GAWTC	1 cut(s)	331
PkrI	GCNGC	2 cut(s)	467, 526
PleI	GAGTC	1 cut(s)	562
PpsI	GAGTC	1 cut(s)	562
Ppu21I	YACGTR	1 cut(s)	173
PpuMI	RGGWCCY	1 cut(s)	757
Psp124BI	GAGCTC	1 cut(s)	87
Psp5II	RGGWCCY	1 cut(s)	757
Psp6I	CCWGG	2 cut(s)	237, 495
PspEI	GGTNACC	2 cut(s)	658, 715
PspGI	CCWGG	2 cut(s)	237, 495
PspN4I	GGNNCC	3 cut(s)	158, 585, 759
PspPI	GGNCC	1 cut(s)	757
PspPPI	RGGWCCY	1 cut(s)	757
PsuI	RGATCY	3 cut(s)	233, 399, 454
RsaI	GTAC	3 cut(s)	77, 116, 322
RsaNI	GTAC	3 cut(s)	76, 115, 321
RseI	CAYNNNNRTG	4 cut(s)	146, 360, 429, 614
SacI	GAGCTC	1 cut(s)	87
SatI	GCNGC	2 cut(s)	466, 525
Sau3AI	GATC	6 cut(s)	127, 198, 233, 399, 454, 835
Sau96I	GGNCC	1 cut(s)	757
SchI	GAGTC	1 cut(s)	562
ScrFI	CCNGG	3 cut(s)	119, 239, 497
SduI	GDGCHC	1 cut(s)	87
SfcI	CTRYAG	2 cut(s)	343, 676
SinI	GGWCC	1 cut(s)	757
SmiMI	CAYNNNNRTG	4 cut(s)	146, 360, 429, 614
SmlI	CTYRAG	1 cut(s)	413
SmoI	CTYRAG	1 cut(s)	413
SnaBI	TACGTA	1 cut(s)	173
Sse9I	AATT	5 cut(s)	301, 460, 528, 575, 669
SseBI	AGGCCT	1 cut(s)	811
SsiI	CCGC	3 cut(s)	73, 96, 277
SspI	AATATT	1 cut(s)	490
SspMI	CTAG	4 cut(s)	89, 650, 801, 807
SstI	GAGCTC	1 cut(s)	87
StuI	AGGCCT	1 cut(s)	811
StyD4I	CCNGG	3 cut(s)	117, 237, 495
StyI	CCWWGG	3 cut(s)	88, 663, 800
TaaI	ACNGT	2 cut(s)	39, 680
TaiI	ACGT	1 cut(s)	175
TaqI	TCGA	5 cut(s)	45, 51, 201, 753, 855
TasI	AATT	5 cut(s)	301, 460, 528, 575, 669
TatI	WGTACW	1 cut(s)	320
TfiI	GAWTC	1 cut(s)	331
TscAI	CASTG	5 cut(s)	108, 564, 616, 685, 826
TseFI	GTSAC	2 cut(s)	658, 686
TseI	GCWGC	2 cut(s)	465, 524
Tsp45I	GTSAC	2 cut(s)	658, 686
TspDTI	ATGAA	5 cut(s)	295, 357, 612, 864, 885
TspRI	CASTG	5 cut(s)	108, 564, 616, 685, 826
VpaK11BI	GGWCC	1 cut(s)	757
XapI	RAATTY	2 cut(s)	575, 669
XceI	RCATGY	1 cut(s)	365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	503
XmaJI	CCTAGG	2 cut(s)	88, 800
XspI	CTAG	4 cut(s)	89, 650, 801, 807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.