Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002128

Physical Location & Seq

Genomic Coordinates Reverse (-)

14657854 .. 14661765

Gene Structure 3912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G171700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGCGATCAGTAGCGAAGCCCTGAACTCCCTGAAACTCACAGACCCAACGCAGTTACTGACGCCGAGCCCCGCGCTCTCCCAAACGGCTCGAACCGCCTTGCAGAACCTCTTCTCCTCCCTCAGACCGTTCACGCCAAAATCGCCATTCGATCAGCTGTTAACAGACGGCTTCGACGCCGAGCAGATATGGCAGCAAATCGACCTGCAATCGCAGCCGCTCATCTCGAGCCTCCGCCGAGATTTGAAACGGTTCGAGAAAAACCCGGACGAGATTAAGGCGCTGAAGGTGCTTGTACAAGGCCAAGAGAAGGTTCTGGAAGCTGAAAATGGGGGTTTAGAGAAGGAAATCGATGGTTTTGATGAGGAATTAGATGAATTAGATGAAGACGATGAGGAGGAGGAAGAGGAAGAAGAAGACGAAGAAGAAGGTGAAGAGAATGAGAGTGAGGATGAAGAGGAGGGAGAAGACAGTGAAGGTGAAGGTGAAGGTAATAATGGGATAGAGGATGGGTTTTTTAAGATAAAGGATTTGAAGAAGTCTTTGGAGGATAGTGAAGCTAGGGAATATGGGTTAATGAAGACTGATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGTAGCGATGATGATGAGGATGAAGAAGACGAAGAGGAAGACGAGGATGAAGAAGAAGATGAGCTGCTTGGAGATTTAGACATTGGCGATGATGAGGATGAAGAAGACGCAGACAAGTTTGCAAGATATGAAGACTTCTATGGAGGAAAAAAGGAAAAACCTTCTAAACGAAAACCAAAATTGGTTGATGGATCAAAAGATTTGGGCATAAACAATGAGGATGAGGATGAAGATGAAGTTGAAGAAGAGGAAGAAGAAGATGATGAAGATGAACAAAAAGATGAGCAGAATCAGACAACTCTTTCTACCCATGAAACGAAGCTTCAGAAACTTCGTTCCGAAATAGACCAGATGGAAAAAGCAAATTTGGAGCCAAAAAATTGGACCATGCGAGGAGAGGTAACTGCAGAGAGAAGGCCAAAGAACAGTGCACTAGAAGTTGATCTAGATTTTGAACACAATGTTAGACCTCCCCCTGTAATCACAGAGGAGGTTACAGCATCGATTGAGGATATTATCCAGAAAAGAATCGAGCAGGGGCGTTTTGATGATGTTCAAAAGGCTCCGACTTTACCCTCTAAAGCACCAAGAGAAATTAAAGAGTTGGACGAGAATAAGAGCAAGAAGGGTCTAGCTGAAGTCTATGAGGACGAATACGTTCAAAAGACGAATGTGGCTTCTGGTCCATTGTCATTCACAGACAAACAGAAGGAAGAGGCAAGCAAGCTGTTCAAGAAACTTTGCTTGAAGTTGGATGCTCTTTCTCATTTCCACTTCACTCCAAAACCTGTTATCGAGGATATGACTGTACAAGCTAATATCCCCGCTCTAGCGATGGAAGAGATTGCACCTGTGGCTGTCTCTGATGCAGCAATGCTAGCACCCGAGGAAGTGTTTTCAGGCAAAGGTGATATTAAAGAAGAAGCAGAACTTACACAGGCCGAGAGAAAGAGGAGGAGAGCTAACAAGAAAAGGAAATATAAAGCTAGGGAAGCAAAAAGGACGACAAAAAAGCCACGAGACAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Mpp10

Protein Analysis

550

Amino Acids

62.74

Weight (kDa)

4.45

Isoelectric Point (pI)

62.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66540 AT5G66540
fragaria_vesca	FvH4_5g05471 FvH4_5g05471
malus_domestica	MD01G1006000.v1.1 MD06G1172400.v1.1 MD14G1178200.v1.1
prunus_persica	Prupe.5G171700_v2.0.a1 Prupe.5G171700_v2.0.a1
pyrus_communis	pycom06g15350
rosa_chinensis	RchiOBHm_Chr7g0193361
rosa_laevigata	RLG00000004276 RLG00000024925
rosa_multiflora	Rmu_sc0002284.1_g000016
rosa_roxburghii	Rroxscaffold_3G00262180 Rroxscaffold_7G00204760
rosa_rugosa	Rorug03G0051600 Rorug06G0002900 Rorug07G0009200
rosa_samantha	Rh1CG244200 Rh3AG109700 Rh3BG113100 Rh3CG114900 Rh3DG114700 Rh6AG121600 Rh6BG115700 Rh6BG115800 Rh6BG115900 Rh6BG116000 Rh6CG114400 Rh6CG114500 Rh6CG114600 Rh6CG376100 Rh6DG103200 Rh6DG103300 Rh6DG103400 Rh7AG135000 Rh7AG135400 Rh7BG135700 Rh7CG139100 Rh7DG137100
rosa_wichuraiana	Rw6G010490 Rw6G010500 Rw7G011540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	213
AccBSI	CCGCTC	2 cut(s)	220, 1448
AccII	CGCG	1 cut(s)	74
AciI	CCGC	5 cut(s)	72, 96, 218, 235, 1446
AclWI	GGATC	1 cut(s)	820
AcsI	RAATTY	1 cut(s)	985
AcuI	CTGAAG	3 cut(s)	305, 929, 1278
AcyI	GRCGYC	2 cut(s)	62, 177
AfaI	GTAC	2 cut(s)	297, 1431
AfiI	CCNNNNNNNGG	1 cut(s)	310
AgsI	TTSAA	8 cut(s)	247, 535, 863, 1076, 1178, 1283, 1354, 1369
AjuI	GAANNNNNNNTTGG	4 cut(s)	297, 329, 527, 559
AloI	GAACNNNNNNTCC	2 cut(s)	98, 130
Alw21I	GWGCWC	1 cut(s)	1054
Alw26I	GTCTC	2 cut(s)	1486, 1635
Alw44I	GTGCAC	1 cut(s)	1050
AlwI	GGATC	1 cut(s)	820
AlwNI	CAGNNNCTG	1 cut(s)	58
Ama87I	CYCGRG	2 cut(s)	226, 1505
AoxI	GGCC	3 cut(s)	301, 1037, 1560
ApaLI	GTGCAC	1 cut(s)	1050
ApeKI	GCWGC	4 cut(s)	193, 214, 685, 1490
ApoI	RAATTY	1 cut(s)	985
Asp700I	GAANNNNTTC	3 cut(s)	110, 251, 1278
AspLEI	GCGC	2 cut(s)	76, 283
AspS9I	GGNCC	2 cut(s)	1005, 1304
AsuC2I	CCSGG	1 cut(s)	266
AsuHPI	GGTGA	4 cut(s)	443, 491, 497, 1541
AsuNHI	GCTAGC	1 cut(s)	1498
AvaI	CYCGRG	2 cut(s)	226, 1505
AvaII	GGWCC	2 cut(s)	1005, 1304
BaeGI	GKGCMC	1 cut(s)	1054
BanII	GRGCYC	1 cut(s)	71
BauI	CACGAG	1 cut(s)	1638
BbsI	GAAGAC	8 cut(s)	393, 423, 474, 587, 654, 666, 732, 759
Bbv12I	GWGCWC	1 cut(s)	1054
BbvI	GCAGC	4 cut(s)	205, 226, 672, 1502
BccI	CCATC	5 cut(s)	347, 503, 803, 967, 1450
BceAI	ACGGC	2 cut(s)	102, 184
BcnI	CCSGG	1 cut(s)	266
BcoDI	GTCTC	2 cut(s)	1486, 1635
BfaI	CTAG	7 cut(s)	561, 1055, 1067, 1253, 1451, 1499, 1608
BfmI	CTRYAG	1 cut(s)	1026
BfoI	RGCGCY	1 cut(s)	284
BfuAI	ACCTGC	1 cut(s)	213
BisI	GCNGC	5 cut(s)	194, 215, 218, 686, 1491
BlsI	GCNGC	5 cut(s)	195, 216, 219, 687, 1492
Bme1390I	CCNGG	1 cut(s)	266
Bme18I	GGWCC	2 cut(s)	1005, 1304
BmeT110I	CYCGRG	2 cut(s)	226, 1505
BmgT120I	GGNCC	2 cut(s)	1005, 1304
BmiI	GGNNCC	2 cut(s)	993, 1185
BmrFI	CCNGG	1 cut(s)	266
BmsI	GCATC	3 cut(s)	1130, 1366, 1477
BmtI	GCTAGC	1 cut(s)	1502
BpiI	GAAGAC	8 cut(s)	393, 423, 474, 587, 654, 666, 732, 759
BpuMI	CCSGG	1 cut(s)	266
Bsa29I	ATCGAT	2 cut(s)	351, 1124
BsaHI	GRCGYC	2 cut(s)	62, 177
BsaJI	CCNNGG	1 cut(s)	1506
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	1 cut(s)	310
Bse3DI	GCAATG	1 cut(s)	1500
BseCI	ATCGAT	2 cut(s)	351, 1124
BseDI	CCNNGG	1 cut(s)	1506
BseGI	GGATG	8 cut(s)	457, 514, 646, 673, 724, 847, 853, 1381
BseLI	CCNNNNNNNGG	1 cut(s)	310
BseMI	GCAATG	1 cut(s)	1500
BseMII	CTCAG	1 cut(s)	136
BseRI	GAGGAG	8 cut(s)	106, 410, 413, 473, 1029, 1124, 1588, 1591
BseSI	GKGCMC	1 cut(s)	1054
BseXI	GCAGC	4 cut(s)	205, 226, 672, 1502
Bsh1236I	CGCG	1 cut(s)	74
BshFI	GGCC	3 cut(s)	303, 1039, 1562
BshVI	ATCGAT	2 cut(s)	351, 1124
BsiHKAI	GWGCWC	1 cut(s)	1054
BsiHKCI	CYCGRG	2 cut(s)	226, 1505
BsiSI	CCGG	1 cut(s)	266
BslI	CCNNNNNNNGG	1 cut(s)	310
BsmAI	GTCTC	2 cut(s)	1486, 1635
BsnI	GGCC	3 cut(s)	303, 1039, 1562
BsoBI	CYCGRG	2 cut(s)	226, 1505
Bsp1286I	GDGCHC	2 cut(s)	71, 1054
Bsp1407I	TGTACA	2 cut(s)	295, 1429
Bsp143I	GATC	4 cut(s)	6, 151, 812, 1063
BspACI	CCGC	5 cut(s)	72, 96, 218, 235, 1446
BspANI	GGCC	3 cut(s)	303, 1039, 1562
BspCNI	CTCAG	1 cut(s)	135
BspDI	ATCGAT	2 cut(s)	351, 1124
BspFNI	CGCG	1 cut(s)	74
BspLI	GGNNCC	2 cut(s)	993, 1185
BspMAI	CTGCAG	1 cut(s)	1030
BspMI	ACCTGC	1 cut(s)	213
BspOI	GCTAGC	1 cut(s)	1502
BspPI	GGATC	1 cut(s)	820
BsrBI	CCGCTC	2 cut(s)	220, 1448
BsrDI	GCAATG	1 cut(s)	1500
BsrGI	TGTACA	2 cut(s)	295, 1429
BssECI	CCNNGG	1 cut(s)	1506
BssMI	GATC	4 cut(s)	6, 151, 812, 1063
BssNI	GRCGYC	2 cut(s)	62, 177
BssSI	CACGAG	1 cut(s)	1638
Bst2BI	CACGAG	1 cut(s)	1638
Bst4CI	ACNGT	5 cut(s)	129, 252, 473, 1049, 1429
Bst6I	CTCTTC	8 cut(s)	116, 399, 429, 450, 648, 861, 1329, 1455
BstACI	GRCGYC	2 cut(s)	62, 177
BstAUI	TGTACA	2 cut(s)	295, 1429
BstC8I	GCNNGC	3 cut(s)	1342, 1346, 1500
BstDEI	CTNAG	1 cut(s)	122
BstF5I	GGATG	8 cut(s)	457, 514, 646, 673, 724, 847, 853, 1381
BstFNI	CGCG	1 cut(s)	74
BstH2I	RGCGCY	1 cut(s)	284
BstHHI	GCGC	2 cut(s)	76, 283
BstKTI	GATC	4 cut(s)	9, 154, 815, 1066
BstMAI	GTCTC	2 cut(s)	1486, 1635
BstMBI	GATC	4 cut(s)	6, 151, 812, 1063
BstMWI	GCNNNNNNNGC	8 cut(s)	95, 142, 190, 214, 289, 1475, 1499, 1613
BstSCI	CCNGG	1 cut(s)	264
BstSFI	CTRYAG	1 cut(s)	1026
BstSLI	GKGCMC	1 cut(s)	1054
BstUI	CGCG	1 cut(s)	74
BstV1I	GCAGC	4 cut(s)	205, 226, 672, 1502
BstV2I	GAAGAC	8 cut(s)	393, 423, 474, 587, 654, 666, 732, 759
BstXI	CCANNNNNNTGG	1 cut(s)	1002
Bsu15I	ATCGAT	2 cut(s)	351, 1124
BsuRI	GGCC	3 cut(s)	303, 1039, 1562
BsuTUI	ATCGAT	2 cut(s)	351, 1124
BtgZI	GCGATG	3 cut(s)	642, 723, 1469
BtsCI	GGATG	8 cut(s)	457, 514, 646, 673, 724, 847, 853, 1381
BtsIMutI	CAGTG	2 cut(s)	478, 1054
BveI	ACCTGC	1 cut(s)	213
Cac8I	GCNNGC	3 cut(s)	1342, 1346, 1500
CaiI	CAGNNNCTG	1 cut(s)	58
CfoI	GCGC	2 cut(s)	76, 283
Cfr13I	GGNCC	2 cut(s)	1005, 1304
ClaI	ATCGAT	2 cut(s)	351, 1124
CseI	GACGC	3 cut(s)	70, 185, 737
Csp6I	GTAC	2 cut(s)	296, 1430
CviAII	CATG	2 cut(s)	932, 1009
CviQI	GTAC	2 cut(s)	296, 1430
DdeI	CTNAG	1 cut(s)	122
DpnI	GATC	4 cut(s)	8, 153, 814, 1065
DpnII	GATC	4 cut(s)	6, 151, 812, 1063
Eam1104I	CTCTTC	8 cut(s)	116, 399, 429, 450, 648, 861, 1329, 1455
EarI	CTCTTC	8 cut(s)	116, 399, 429, 450, 648, 861, 1329, 1455
EciI	GGCGGA	1 cut(s)	224
Eco24I	GRGCYC	1 cut(s)	71
Eco47I	GGWCC	2 cut(s)	1005, 1304
Eco57I	CTGAAG	3 cut(s)	305, 929, 1278
Eco88I	CYCGRG	2 cut(s)	226, 1505
EcoT38I	GRGCYC	1 cut(s)	71
FaeI	CATG	2 cut(s)	935, 1012
FalI	AAGNNNNNCTT	2 cut(s)	1536, 1568
FatI	CATG	2 cut(s)	931, 1008
FauI	CCCGC	2 cut(s)	79, 1453
Fnu4HI	GCNGC	5 cut(s)	194, 215, 218, 686, 1491
FokI	GGATG	8 cut(s)	464, 521, 653, 680, 731, 854, 860, 1388
FriOI	GRGCYC	1 cut(s)	71
Fsp4HI	GCNGC	5 cut(s)	194, 215, 218, 686, 1491
FspBI	CTAG	7 cut(s)	561, 1055, 1067, 1253, 1451, 1499, 1608
GlaI	GCGC	2 cut(s)	75, 282
GluI	GCNGC	5 cut(s)	194, 215, 218, 686, 1491
HaeII	RGCGCY	1 cut(s)	284
HaeIII	GGCC	3 cut(s)	303, 1039, 1562
HapII	CCGG	1 cut(s)	266
HgaI	GACGC	3 cut(s)	70, 185, 737
HhaI	GCGC	2 cut(s)	76, 283
Hin1I	GRCGYC	2 cut(s)	62, 177
Hin1II	CATG	2 cut(s)	935, 1012
Hin6I	GCGC	2 cut(s)	74, 281
HinP1I	GCGC	2 cut(s)	74, 281
HincII	GTYRAC	1 cut(s)	162
HindII	GTYRAC	1 cut(s)	162
HindIII	AAGCTT	1 cut(s)	941
HinfI	GANTC	2 cut(s)	910, 1149
HpaI	GTTAAC	1 cut(s)	162
HpaII	CCGG	1 cut(s)	266
HphI	GGTGA	4 cut(s)	443, 491, 497, 1541
Hpy166II	GTNNAC	3 cut(s)	132, 162, 1052
Hpy188I	TCNGA	6 cut(s)	125, 915, 948, 961, 1188, 1486
Hpy188III	TCNNGA	6 cut(s)	226, 256, 317, 1067, 1141, 1354
Hpy8I	GTNNAC	3 cut(s)	132, 162, 1052
Hpy99I	CGWCG	1 cut(s)	179
HpyCH4III	ACNGT	5 cut(s)	129, 252, 473, 1049, 1429
HpyCH4IV	ACGT	1 cut(s)	1278
HpyCH4V	TGCA	7 cut(s)	103, 208, 743, 1028, 1052, 1469, 1490
HpyF10VI	GCNNNNNNNGC	8 cut(s)	95, 142, 190, 214, 289, 1475, 1499, 1613
HpyF3I	CTNAG	1 cut(s)	122
HpySE526I	ACGT	1 cut(s)	1278
Hsp92I	GRCGYC	2 cut(s)	62, 177
Hsp92II	CATG	2 cut(s)	935, 1012
HspAI	GCGC	2 cut(s)	74, 281
KspAI	GTTAAC	1 cut(s)	162
Kzo9I	GATC	4 cut(s)	6, 151, 812, 1063
LmnI	GCTCC	2 cut(s)	991, 1189
Lsp1109I	GCAGC	4 cut(s)	205, 226, 672, 1502
LweI	GCATC	3 cut(s)	1130, 1366, 1477
MaeI	CTAG	7 cut(s)	561, 1055, 1067, 1253, 1451, 1499, 1608
MaeII	ACGT	1 cut(s)	1278
MaeIII	GTNAC	3 cut(s)	54, 1021, 1114
MalI	GATC	4 cut(s)	8, 153, 814, 1065
MbiI	CCGCTC	2 cut(s)	220, 1448
MboI	GATC	4 cut(s)	6, 151, 812, 1063
MhlI	GDGCHC	2 cut(s)	71, 1054
MluCI	AATT	6 cut(s)	368, 377, 800, 985, 1000, 1215
MmeI	TCCRAC	3 cut(s)	1206, 1211, 1353
MroXI	GAANNNNTTC	3 cut(s)	110, 251, 1278
MseI	TTAA	6 cut(s)	161, 276, 519, 575, 1218, 1536
MspA1I	CMGCKG	1 cut(s)	157
MspI	CCGG	1 cut(s)	266
MspR9I	CCNGG	1 cut(s)	266
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	8 cut(s)	95, 142, 190, 214, 289, 1475, 1499, 1613
NciI	CCSGG	1 cut(s)	266
NdeII	GATC	4 cut(s)	6, 151, 812, 1063
NheI	GCTAGC	1 cut(s)	1498
NlaIII	CATG	2 cut(s)	935, 1012
NlaIV	GGNNCC	2 cut(s)	993, 1185
NmeAIII	GCCGAG	4 cut(s)	90, 205, 263, 1588
PaeR7I	CTCGAG	1 cut(s)	226
PdmI	GAANNNNTTC	3 cut(s)	110, 251, 1278
PfeI	GAWTC	2 cut(s)	910, 1149
PkrI	GCNGC	5 cut(s)	195, 216, 219, 687, 1492
PspN4I	GGNNCC	2 cut(s)	993, 1185
PspPI	GGNCC	2 cut(s)	1005, 1304
PstI	CTGCAG	1 cut(s)	1030
PstNI	CAGNNNCTG	1 cut(s)	58
PvuII	CAGCTG	1 cut(s)	157
RsaI	GTAC	2 cut(s)	297, 1431
RsaNI	GTAC	2 cut(s)	296, 1430
SaqAI	TTAA	6 cut(s)	161, 276, 519, 575, 1218, 1536
SatI	GCNGC	5 cut(s)	194, 215, 218, 686, 1491
Sau3AI	GATC	4 cut(s)	6, 151, 812, 1063
Sau96I	GGNCC	2 cut(s)	1005, 1304
ScrFI	CCNGG	1 cut(s)	266
SduI	GDGCHC	2 cut(s)	71, 1054
SfaNI	GCATC	3 cut(s)	1130, 1366, 1477
SfcI	CTRYAG	1 cut(s)	1026
Sfr274I	CTCGAG	1 cut(s)	226
SinI	GGWCC	2 cut(s)	1005, 1304
SlaI	CTCGAG	1 cut(s)	226
SmlI	CTYRAG	1 cut(s)	226
SmoI	CTYRAG	1 cut(s)	226
Sse9I	AATT	6 cut(s)	368, 377, 800, 985, 1000, 1215
SsiI	CCGC	5 cut(s)	72, 96, 218, 235, 1446
SspMI	CTAG	7 cut(s)	561, 1055, 1067, 1253, 1451, 1499, 1608
StyD4I	CCNGG	1 cut(s)	264
TaaI	ACNGT	5 cut(s)	129, 252, 473, 1049, 1429
TaiI	ACGT	1 cut(s)	1281
TasI	AATT	6 cut(s)	368, 377, 800, 985, 1000, 1215
TatI	WGTACW	2 cut(s)	295, 1429
TauI	GCSGC	1 cut(s)	220
TfiI	GAWTC	2 cut(s)	910, 1149
Tru1I	TTAA	6 cut(s)	161, 276, 519, 575, 1218, 1536
Tru9I	TTAA	6 cut(s)	161, 276, 519, 575, 1218, 1536
TscAI	CASTG	2 cut(s)	478, 1054
TseI	GCWGC	4 cut(s)	193, 214, 685, 1490
TspRI	CASTG	2 cut(s)	478, 1054
VneI	GTGCAC	1 cut(s)	1050
VpaK11BI	GGWCC	2 cut(s)	1005, 1304
XapI	RAATTY	1 cut(s)	985
XbaI	TCTAGA	1 cut(s)	1066
XhoI	CTCGAG	1 cut(s)	226
XmnI	GAANNNNTTC	3 cut(s)	110, 251, 1278
XspI	CTAG	7 cut(s)	561, 1055, 1067, 1253, 1451, 1499, 1608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.