U3 small nucleolar ribonucleoprotein protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66540 AT5G66540 |
| fragaria_vesca | FvH4_5g05471 FvH4_5g05471 |
| malus_domestica | MD01G1006000.v1.1 MD06G1172400.v1.1 MD14G1178200.v1.1 |
| prunus_persica | Prupe.5G171700_v2.0.a1 Prupe.5G171700_v2.0.a1 |
| pyrus_communis | pycom06g15350 |
| rosa_chinensis | RchiOBHm_Chr7g0193361 |
| rosa_laevigata | RLG00000004276 RLG00000024925 |
| rosa_multiflora | Rmu_sc0002284.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00262180 Rroxscaffold_7G00204760 |
| rosa_rugosa | Rorug03G0051600 Rorug06G0002900 Rorug07G0009200 |
| rosa_samantha | Rh1CG244200 Rh3AG109700 Rh3BG113100 Rh3CG114900 Rh3DG114700 Rh6AG121600 Rh6BG115700 Rh6BG115800 Rh6BG115900 Rh6BG116000 Rh6CG114400 Rh6CG114500 Rh6CG114600 Rh6CG376100 Rh6DG103200 Rh6DG103300 Rh6DG103400 Rh7AG135000 Rh7AG135400 Rh7BG135700 Rh7CG139100 Rh7DG137100 |
| rosa_wichuraiana | Rw6G010490 Rw6G010500 Rw7G011540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 100, 343 |
| AcuI | CTGAAG | 2 cut(s) | 314, 416 |
| AfaI | GTAC | 1 cut(s) | 153 |
| AgsI | TTSAA | 4 cut(s) | 26, 91, 122, 343 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| AoxI | GGCC | 1 cut(s) | 106 |
| ApoI | RAATTY | 2 cut(s) | 100, 343 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 152, 184 |
| AspS9I | GGNCC | 1 cut(s) | 107 |
| AxyI | CCTNAGG | 1 cut(s) | 141 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 195, 227 |
| BbsI | GAAGAC | 1 cut(s) | 162 |
| BccI | CCATC | 2 cut(s) | 223, 418 |
| BfaI | CTAG | 2 cut(s) | 32, 74 |
| BmgT120I | GGNCC | 1 cut(s) | 107 |
| BmsI | GCATC | 3 cut(s) | 28, 136, 395 |
| BpiI | GAAGAC | 1 cut(s) | 162 |
| BpuEI | CTTGAG | 1 cut(s) | 213 |
| BsaJI | CCNNGG | 1 cut(s) | 242 |
| Bse21I | CCTNAGG | 1 cut(s) | 141 |
| Bse3DI | GCAATG | 1 cut(s) | 370 |
| BseDI | CCNNGG | 1 cut(s) | 242 |
| BseGI | GGATG | 2 cut(s) | 10, 151 |
| BseMI | GCAATG | 1 cut(s) | 370 |
| BseMII | CTCAG | 2 cut(s) | 132, 371 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bsp1407I | TGTACA | 1 cut(s) | 151 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 2 cut(s) | 133, 372 |
| BspHI | TCATGA | 1 cut(s) | 63 |
| BsrDI | GCAATG | 1 cut(s) | 370 |
| BsrGI | TGTACA | 1 cut(s) | 151 |
| BssECI | CCNNGG | 1 cut(s) | 242 |
| BssT1I | CCWWGG | 1 cut(s) | 242 |
| Bst4CI | ACNGT | 1 cut(s) | 253 |
| BstAUI | TGTACA | 1 cut(s) | 151 |
| BstDEI | CTNAG | 2 cut(s) | 141, 380 |
| BstF5I | GGATG | 2 cut(s) | 10, 151 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 83, 230 |
| BstV2I | GAAGAC | 1 cut(s) | 162 |
| Bsu36I | CCTNAGG | 1 cut(s) | 141 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| BtsCI | GGATG | 2 cut(s) | 10, 151 |
| CciI | TCATGA | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 1 cut(s) | 107 |
| Csp6I | GTAC | 1 cut(s) | 152 |
| CviAII | CATG | 1 cut(s) | 64 |
| CviJI | RGCY | 9 cut(s) | 49, 72, 77, 86, 108, 126, 206, 355, 428 |
| CviKI_1 | RGCY | 9 cut(s) | 49, 72, 77, 86, 108, 126, 206, 355, 428 |
| CviQI | GTAC | 1 cut(s) | 152 |
| DdeI | CTNAG | 2 cut(s) | 141, 380 |
| Eco130I | CCWWGG | 1 cut(s) | 242 |
| Eco57I | CTGAAG | 2 cut(s) | 314, 416 |
| Eco81I | CCTNAGG | 1 cut(s) | 141 |
| EcoO109I | RGGNCCY | 1 cut(s) | 107 |
| EcoRI | GAATTC | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 1 cut(s) | 242 |
| ErhI | CCWWGG | 1 cut(s) | 242 |
| FaeI | CATG | 1 cut(s) | 67 |
| FaiI | YATR | 5 cut(s) | 65, 260, 281, 331, 444 |
| FatI | CATG | 1 cut(s) | 63 |
| FokI | GGATG | 2 cut(s) | 17, 158 |
| FspBI | CTAG | 2 cut(s) | 32, 74 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| Hin1II | CATG | 1 cut(s) | 67 |
| HinfI | GANTC | 3 cut(s) | 118, 160, 439 |
| Hpy166II | GTNNAC | 1 cut(s) | 154 |
| Hpy188I | TCNGA | 4 cut(s) | 294, 381, 396, 409 |
| Hpy188III | TCNNGA | 4 cut(s) | 64, 91, 140, 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 154 |
| HpyAV | CCTTC | 2 cut(s) | 97, 391 |
| HpyCH4III | ACNGT | 1 cut(s) | 253 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 83, 230 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 380 |
| Hsp92II | CATG | 1 cut(s) | 67 |
| LpnPI | CCDG | 2 cut(s) | 153, 192 |
| LweI | GCATC | 3 cut(s) | 28, 136, 395 |
| MaeI | CTAG | 2 cut(s) | 32, 74 |
| MboII | GAAGA | 4 cut(s) | 14, 162, 315, 433 |
| MfeI | CAATTG | 1 cut(s) | 219 |
| MluCI | AATT | 5 cut(s) | 100, 135, 219, 343, 390 |
| MnlI | CCTC | 8 cut(s) | 88, 120, 136, 142, 187, 249, 268, 387 |
| MseI | TTAA | 1 cut(s) | 189 |
| MunI | CAATTG | 1 cut(s) | 219 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 83, 230 |
| NlaIII | CATG | 1 cut(s) | 67 |
| PagI | TCATGA | 1 cut(s) | 63 |
| PfeI | GAWTC | 3 cut(s) | 118, 160, 439 |
| PspPI | GGNCC | 1 cut(s) | 107 |
| RsaI | GTAC | 1 cut(s) | 153 |
| RsaNI | GTAC | 1 cut(s) | 152 |
| SaqAI | TTAA | 1 cut(s) | 189 |
| Sau96I | GGNCC | 1 cut(s) | 107 |
| SetI | ASST | 3 cut(s) | 208, 241, 402 |
| SfaNI | GCATC | 3 cut(s) | 28, 136, 395 |
| SmlI | CTYRAG | 1 cut(s) | 228 |
| SmoI | CTYRAG | 1 cut(s) | 228 |
| Sse9I | AATT | 5 cut(s) | 100, 135, 219, 343, 390 |
| SspMI | CTAG | 2 cut(s) | 32, 74 |
| StyI | CCWWGG | 1 cut(s) | 242 |
| TaaI | ACNGT | 1 cut(s) | 253 |
| TaqI | TCGA | 1 cut(s) | 273 |
| TasI | AATT | 5 cut(s) | 100, 135, 219, 343, 390 |
| TatI | WGTACW | 1 cut(s) | 151 |
| TfiI | GAWTC | 3 cut(s) | 118, 160, 439 |
| Tru1I | TTAA | 1 cut(s) | 189 |
| Tru9I | TTAA | 1 cut(s) | 189 |
| TspDTI | ATGAA | 2 cut(s) | 49, 282 |
| XapI | RAATTY | 2 cut(s) | 100, 343 |
| XspI | CTAG | 2 cut(s) | 32, 74 |