U3 small nucleolar ribonucleoprotein protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66540 AT5G66540 |
| fragaria_vesca | FvH4_5g05471 FvH4_5g05471 |
| malus_domestica | MD01G1006000.v1.1 MD06G1172400.v1.1 MD14G1178200.v1.1 |
| prunus_persica | Prupe.5G171700_v2.0.a1 Prupe.5G171700_v2.0.a1 |
| pyrus_communis | pycom06g15350 |
| rosa_chinensis | RchiOBHm_Chr7g0193361 |
| rosa_laevigata | RLG00000004276 RLG00000024925 |
| rosa_multiflora | Rmu_sc0002284.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00262180 Rroxscaffold_7G00204760 |
| rosa_rugosa | Rorug03G0051600 Rorug06G0002900 Rorug07G0009200 |
| rosa_samantha | Rh1CG244200 Rh3AG109700 Rh3BG113100 Rh3CG114900 Rh3DG114700 Rh6AG121600 Rh6BG115700 Rh6BG115800 Rh6BG115900 Rh6BG116000 Rh6CG114400 Rh6CG114500 Rh6CG114600 Rh6CG376100 Rh6DG103200 Rh6DG103300 Rh6DG103400 Rh7AG135000 Rh7AG135400 Rh7BG135700 Rh7CG139100 Rh7DG137100 |
| rosa_wichuraiana | Rw6G010490 Rw6G010500 Rw7G011540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 68 |
| AcsI | RAATTY | 1 cut(s) | 104 |
| AluBI | AGCT | 3 cut(s) | 8, 89, 113 |
| AluI | AGCT | 3 cut(s) | 8, 89, 113 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| ApoI | RAATTY | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 1 cut(s) | 47 |
| AsuNHI | GCTAGC | 1 cut(s) | 4 |
| AxyI | CCTNAGG | 1 cut(s) | 12 |
| BauI | CACGAG | 1 cut(s) | 144 |
| BccI | CCATC | 1 cut(s) | 124 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfaI | CTAG | 1 cut(s) | 5 |
| BmsI | GCATC | 1 cut(s) | 174 |
| BmtI | GCTAGC | 1 cut(s) | 8 |
| Bse21I | CCTNAGG | 1 cut(s) | 12 |
| BseGI | GGATG | 1 cut(s) | 135 |
| BseRI | GAGGAG | 1 cut(s) | 97 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BspACI | CCGC | 1 cut(s) | 68 |
| BspCNI | CTCAG | 1 cut(s) | 4 |
| BspOI | GCTAGC | 1 cut(s) | 8 |
| BssSI | CACGAG | 1 cut(s) | 144 |
| Bst2BI | CACGAG | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 12 |
| BstF5I | GGATG | 1 cut(s) | 135 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 119 |
| Bsu36I | CCTNAGG | 1 cut(s) | 12 |
| BtsCI | GGATG | 1 cut(s) | 135 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CviJI | RGCY | 5 cut(s) | 8, 89, 113, 142, 173 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 89, 113, 142, 173 |
| DdeI | CTNAG | 1 cut(s) | 12 |
| DraI | TTTAAA | 1 cut(s) | 109 |
| EciI | GGCGGA | 1 cut(s) | 83 |
| Eco81I | CCTNAGG | 1 cut(s) | 12 |
| FaiI | YATR | 2 cut(s) | 176, 178 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 42, 74 |
| FauNDI | CATATG | 1 cut(s) | 176 |
| FokI | GGATG | 1 cut(s) | 142 |
| FspBI | CTAG | 1 cut(s) | 5 |
| HphI | GGTGA | 1 cut(s) | 47 |
| Hpy188III | TCNNGA | 1 cut(s) | 11 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 119 |
| HpyF3I | CTNAG | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 13 |
| LpnPI | CCDG | 2 cut(s) | 24, 50 |
| LweI | GCATC | 1 cut(s) | 174 |
| MaeI | CTAG | 1 cut(s) | 5 |
| MaeIII | GTNAC | 1 cut(s) | 115 |
| MboII | GAAGA | 1 cut(s) | 59 |
| MluCI | AATT | 1 cut(s) | 104 |
| MnlI | CCTC | 2 cut(s) | 7, 75 |
| MseI | TTAA | 2 cut(s) | 42, 108 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 119 |
| NdeI | CATATG | 1 cut(s) | 176 |
| NheI | GCTAGC | 1 cut(s) | 4 |
| NmuCI | GTSAC | 1 cut(s) | 115 |
| SaqAI | TTAA | 2 cut(s) | 42, 108 |
| SetI | ASST | 4 cut(s) | 10, 37, 91, 115 |
| SfaNI | GCATC | 1 cut(s) | 174 |
| SgeI | CNNG | 8 cut(s) | 17, 23, 39, 77, 106, 156, 158, 169 |
| Sse9I | AATT | 1 cut(s) | 104 |
| SsiI | CCGC | 1 cut(s) | 68 |
| SspMI | CTAG | 1 cut(s) | 5 |
| TaqI | TCGA | 1 cut(s) | 168 |
| TasI | AATT | 1 cut(s) | 104 |
| Tru1I | TTAA | 2 cut(s) | 42, 108 |
| Tru9I | TTAA | 2 cut(s) | 42, 108 |
| TseFI | GTSAC | 1 cut(s) | 115 |
| Tsp45I | GTSAC | 1 cut(s) | 115 |
| XapI | RAATTY | 1 cut(s) | 104 |
| XspI | CTAG | 1 cut(s) | 5 |