Prupe.6G013400_v2.0.a1

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
939763 .. 942302
2540 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G013400.1

Sequence Viewer

Length: 1101 bp
ATGAGTCTACCTGAGAAAATGCCCCCTTCTTCTTCTTCTTCTGCTTCTCAAAATAATTGCAGTATTAAAATATCGGTAAGTATTTTGTTTGCGATATTATTAATCTTGTGTGCAGGTGCAGGATATGGTGAGGCTCAGCTGACCACTACGTTTTATGATGAAGTCTGCCCGTGCGCCATAACCACTGTGCGTGGTGTCATTCTAGACGCTTTGCAGACAGATCCCCGGATTGCTGCCAGCCTCACCAGGCTTCACTTCCATGACTGCTTCGTCAACGGTTGTGATGGATCAATCTTGTTGGACAACAGTAGCAGCACTTCCAGTACCATAGACAGCGAGAAAGCAGCATTTGCAAATAACAACTCAGCCAGAGGATTTGATGTTGTGGACAACATCAAGACTGCATTGGAGACTGCTTGTCCCGGGGTTGTTTCCTGTGCTGACATTCTCGCCATTGCAGCTGAAGAATCTGTTTCTTTGTCTGGAGGCCCCTCGTGGACAGTTCTATTAGGAAGAAGGGATAGCACAACAGCGAATCGCACGGCTGCCAATGAAGCCCTTCCAGCTCCCTCTTTCACCCTTGACGAACTCAAGGCCAGCTTCGCAGCTGTAGGCCTCGACACCACTGATCTGGTTGCACTATCCGGTGCTCACACATTTGGGCGTGCTAAATGTCAATCTTTCAGCAATCGACTGTATGACTTCAACAGCACAGGCCTTCCTGATCCGACCTTAAACTCAACCTACTTAGAAACACTAAGAGAGTTATGCCCCCAGAACGGGAATGCGAGTGTGCTAGCTAACTTTGATCCTTCAACACCTAACACTTTCGACGGCAAGTATTTCTCTAATCTTCAAGTTCGTAAGGGCCTTCTCCAAAGCGATCAAGAGCTGTTTTCGACCAGCGGGGCTGATACGATCAACATTGTTAACAACTTCAGCGTTAATCAGAGCGCCTTCTTTGAGAGCTTTGTGAAATCCATGATTAAAATGGGGAATATAAGCCCTCTGACCGGAACTGATGGAGAGATTCGATTGAATTGCAGGAGGGTTAATGGAGATTCGTATGGATCATCTGCTACTTTGATAGCGGAGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

367

Amino Acids

38.8

Weight (kDa)

4.66

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 104
AasI GACNNNNNNGTC 1 cut(s) 269
Acc36I ACCTGC 1 cut(s) 104
AccI GTMKAC 1 cut(s) 7
AciI CCGC 2 cut(s) 906, 1091
AclWI GGATC 5 cut(s) 215, 295, 719, 803, 1078
AcuI CTGAAG 2 cut(s) 483, 922
AfaI GTAC 1 cut(s) 325
AfiI CCNNNNNNNGG 3 cut(s) 779, 780, 1013
AgsI TTSAA 4 cut(s) 706, 816, 857, 1039
AhdI GACNNNNNGTC 1 cut(s) 417
AjnI CCWGG 1 cut(s) 245
AluBI AGCT 8 cut(s) 139, 461, 566, 600, 608, 800, 892, 969
AluI AGCT 8 cut(s) 139, 461, 566, 600, 608, 800, 892, 969
Alw21I GWGCWC 1 cut(s) 652
Alw26I GTCTC 1 cut(s) 404
AlwI GGATC 5 cut(s) 215, 295, 719, 803, 1078
Ama87I CYCGRG 1 cut(s) 422
AoxI GGCC 5 cut(s) 487, 594, 613, 715, 868
ApeKI GCWGC 6 cut(s) 233, 312, 344, 458, 545, 605
AseI ATTAAT 1 cut(s) 101
Asp700I GAANNNNTTC 1 cut(s) 558
AspLEI GCGC 2 cut(s) 176, 956
AspS9I GGNCC 2 cut(s) 488, 868
AsuC2I CCSGG 3 cut(s) 226, 423, 424
AsuHPI GGTGA 3 cut(s) 140, 235, 568
AsuNHI GCTAGC 1 cut(s) 796
AvaI CYCGRG 1 cut(s) 422
BarI GAAGNNNNNNTAC 2 cut(s) 301, 333
BauI CACGAG 1 cut(s) 493
Bbv12I GWGCWC 1 cut(s) 652
BbvI GCAGC 6 cut(s) 220, 324, 356, 470, 532, 617
BccI CCATC 2 cut(s) 278, 1016
BceAI ACGGC 2 cut(s) 558, 850
BcgI CGANNNNNNTGC 2 cut(s) 1023, 1057
BciT130I CCWGG 1 cut(s) 247
BcnI CCSGG 3 cut(s) 226, 423, 424
BcoDI GTCTC 1 cut(s) 404
BfaI CTAG 2 cut(s) 203, 797
BfmI CTRYAG 1 cut(s) 609
BfoI RGCGCY 1 cut(s) 957
BfuAI ACCTGC 1 cut(s) 104
BisI GCNGC 6 cut(s) 234, 313, 345, 459, 546, 606
BlpI GCTNAGC 1 cut(s) 135
BlsI GCNGC 6 cut(s) 235, 314, 346, 460, 547, 607
Bme1390I CCNGG 4 cut(s) 226, 247, 423, 424
BmeRI GACNNNNNGTC 1 cut(s) 417
BmeT110I CYCGRG 1 cut(s) 422
BmgT120I GGNCC 2 cut(s) 488, 868
BmiI GGNNCC 1 cut(s) 490
BmrFI CCNGG 4 cut(s) 226, 247, 423, 424
BmtI GCTAGC 1 cut(s) 800
BpmI CTGGAG 1 cut(s) 504
Bpu1102I GCTNAGC 1 cut(s) 135
BpuEI CTTGAG 1 cut(s) 575
BpuMI CCSGG 3 cut(s) 226, 423, 424
BsaJI CCNNGG 3 cut(s) 224, 422, 423
BsaWI WCCGGW 2 cut(s) 644, 1013
Bsc4I CCNNNNNNNGG 3 cut(s) 779, 780, 1013
Bse1I ACTGG 1 cut(s) 321
Bse3DI GCAATG 1 cut(s) 453
BseBI CCWGG 1 cut(s) 247
BseDI CCNNGG 3 cut(s) 224, 422, 423
BseLI CCNNNNNNNGG 3 cut(s) 779, 780, 1013
BseMI GCAATG 1 cut(s) 453
BseMII CTCAG 2 cut(s) 149, 378
BseNI ACTGG 1 cut(s) 321
BseXI GCAGC 6 cut(s) 220, 324, 356, 470, 532, 617
BsgI GTGCAG 2 cut(s) 132, 138
BshFI GGCC 5 cut(s) 489, 596, 615, 717, 870
BsiHKAI GWGCWC 1 cut(s) 652
BsiHKCI CYCGRG 1 cut(s) 422
BsiSI CCGG 4 cut(s) 226, 423, 645, 1014
BslFI GGGAC 1 cut(s) 405
BslI CCNNNNNNNGG 3 cut(s) 779, 780, 1013
BsmAI GTCTC 1 cut(s) 404
BsmFI GGGAC 1 cut(s) 405
BsmI GAATGC 1 cut(s) 790
BsnI GGCC 5 cut(s) 489, 596, 615, 717, 870
BsoBI CYCGRG 1 cut(s) 422
Bsp1286I GDGCHC 1 cut(s) 652
Bsp143I GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
Bsp1720I GCTNAGC 1 cut(s) 135
BspACI CCGC 2 cut(s) 906, 1091
BspANI GGCC 5 cut(s) 489, 596, 615, 717, 870
BspCNI CTCAG 3 cut(s) 4, 148, 377
BspLI GGNNCC 1 cut(s) 490
BspMI ACCTGC 1 cut(s) 104
BspOI GCTAGC 1 cut(s) 800
BspPI GGATC 5 cut(s) 215, 295, 719, 803, 1078
BsrDI GCAATG 1 cut(s) 453
BsrI ACTGG 1 cut(s) 321
BssECI CCNNGG 3 cut(s) 224, 422, 423
BssMI GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
BssSI CACGAG 1 cut(s) 493
Bst2BI CACGAG 1 cut(s) 493
Bst2UI CCWGG 1 cut(s) 247
Bst4CI ACNGT 5 cut(s) 187, 278, 308, 502, 696
BstAPI GCANNNNNTGC 1 cut(s) 350
BstC8I GCNNGC 4 cut(s) 238, 598, 666, 798
BstDEI CTNAG 5 cut(s) 12, 135, 364, 748, 758
BstH2I RGCGCY 1 cut(s) 957
BstHHI GCGC 2 cut(s) 176, 956
BstKTI GATC 8 cut(s) 223, 290, 631, 727, 811, 886, 921, 1073
BstMAI GTCTC 1 cut(s) 404
BstMBI GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
BstMWI GCNNNNNNNGC 5 cut(s) 350, 458, 554, 563, 602
BstNI CCWGG 1 cut(s) 247
BstSCI CCNGG 4 cut(s) 224, 245, 421, 422
BstSFI CTRYAG 1 cut(s) 609
BstV1I GCAGC 6 cut(s) 220, 324, 356, 470, 532, 617
BstX2I RGATCY 1 cut(s) 220
BstXI CCANNNNNNTGG 1 cut(s) 631
BstYI RGATCY 1 cut(s) 220
BsuRI GGCC 5 cut(s) 489, 596, 615, 717, 870
BtsIMutI CAGTG 2 cut(s) 183, 624
BveI ACCTGC 1 cut(s) 104
Cac8I GCNNGC 4 cut(s) 238, 598, 666, 798
CfoI GCGC 2 cut(s) 176, 956
Cfr13I GGNCC 2 cut(s) 488, 868
Cfr9I CCCGGG 1 cut(s) 422
CseI GACGC 1 cut(s) 215
Csp6I GTAC 1 cut(s) 324
CviAII CATG 2 cut(s) 260, 982
CviQI GTAC 1 cut(s) 324
DdeI CTNAG 5 cut(s) 12, 135, 364, 748, 758
DpnI GATC 8 cut(s) 222, 289, 630, 726, 810, 885, 920, 1072
DpnII GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
DrdI GACNNNNNNGTC 1 cut(s) 269
DriI GACNNNNNGTC 1 cut(s) 417
DseDI GACNNNNNNGTC 1 cut(s) 269
Eam1105I GACNNNNNGTC 1 cut(s) 417
Eco147I AGGCCT 2 cut(s) 615, 717
Eco57I CTGAAG 2 cut(s) 483, 922
Eco88I CYCGRG 1 cut(s) 422
EcoO109I RGGNCCY 2 cut(s) 488, 868
EcoRII CCWGG 1 cut(s) 245
FaeI CATG 2 cut(s) 263, 985
FalI AAGNNNNNCTT 2 cut(s) 584, 616
FaqI GGGAC 1 cut(s) 405
FatI CATG 2 cut(s) 259, 981
FauI CCCGC 1 cut(s) 899
FblI GTMKAC 1 cut(s) 7
Fnu4HI GCNGC 6 cut(s) 234, 313, 345, 459, 546, 606
Fsp4HI GCNGC 6 cut(s) 234, 313, 345, 459, 546, 606
FspBI CTAG 2 cut(s) 203, 797
GlaI GCGC 2 cut(s) 175, 955
GluI GCNGC 6 cut(s) 234, 313, 345, 459, 546, 606
GsuI CTGGAG 1 cut(s) 504
HaeII RGCGCY 1 cut(s) 957
HaeIII GGCC 5 cut(s) 489, 596, 615, 717, 870
HapII CCGG 4 cut(s) 226, 423, 645, 1014
HgaI GACGC 1 cut(s) 215
HhaI GCGC 2 cut(s) 176, 956
Hin1II CATG 2 cut(s) 263, 985
Hin6I GCGC 2 cut(s) 174, 954
HinP1I GCGC 2 cut(s) 174, 954
HincII GTYRAC 2 cut(s) 274, 931
HindII GTYRAC 2 cut(s) 274, 931
HinfI GANTC 5 cut(s) 4, 467, 535, 1030, 1061
HpaI GTTAAC 1 cut(s) 931
HpaII CCGG 4 cut(s) 226, 423, 645, 1014
HphI GGTGA 3 cut(s) 140, 235, 568
Hpy166II GTNNAC 5 cut(s) 8, 274, 388, 498, 931
Hpy188I TCNGA 3 cut(s) 729, 951, 1011
Hpy188III TCNNGA 5 cut(s) 203, 397, 483, 722, 887
Hpy8I GTNNAC 5 cut(s) 8, 274, 388, 498, 931
Hpy99I CGWCG 1 cut(s) 836
HpyAV CCTTC 7 cut(s) 36, 510, 569, 728, 822, 881, 967
HpyCH4III ACNGT 5 cut(s) 187, 278, 308, 502, 696
HpyCH4IV ACGT 1 cut(s) 149
HpyCH4V TGCA 9 cut(s) 60, 113, 119, 214, 353, 404, 458, 638, 1044
HpyF10VI GCNNNNNNNGC 5 cut(s) 350, 458, 554, 563, 602
HpyF3I CTNAG 5 cut(s) 12, 135, 364, 748, 758
HpySE526I ACGT 1 cut(s) 149
Hsp92II CATG 2 cut(s) 263, 985
HspAI GCGC 2 cut(s) 174, 954
KspAI GTTAAC 1 cut(s) 931
Kzo9I GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
LmnI GCTCC 1 cut(s) 571
Lsp1109I GCAGC 6 cut(s) 220, 324, 356, 470, 532, 617
MaeI CTAG 2 cut(s) 203, 797
MaeII ACGT 1 cut(s) 149
MalI GATC 8 cut(s) 222, 289, 630, 726, 810, 885, 920, 1072
MboI GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
MboII GAAGA 7 cut(s) 21, 24, 27, 30, 476, 525, 845
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 1 cut(s) 652
MluCI AATT 2 cut(s) 55, 1039
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 2 cut(s) 279, 752
MnlI CCTC 9 cut(s) 124, 251, 365, 479, 502, 580, 626, 1017, 1041
MroXI GAANNNNTTC 1 cut(s) 558
MseI TTAA 7 cut(s) 66, 101, 734, 930, 945, 987, 1053
MslI CAYNNNNRTG 1 cut(s) 258
MspA1I CMGCKG 4 cut(s) 139, 461, 608, 906
MspI CCGG 4 cut(s) 226, 423, 645, 1014
MspR9I CCNGG 4 cut(s) 226, 247, 423, 424
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 1 cut(s) 247
MwoI GCNNNNNNNGC 5 cut(s) 350, 458, 554, 563, 602
NciI CCSGG 3 cut(s) 226, 423, 424
NdeII GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
NheI GCTAGC 1 cut(s) 796
NlaIII CATG 2 cut(s) 263, 985
NlaIV GGNNCC 1 cut(s) 490
PaqCI CACCTGC 1 cut(s) 104
PceI AGGCCT 2 cut(s) 615, 717
PctI GAATGC 1 cut(s) 790
PdmI GAANNNNTTC 1 cut(s) 558
PfeI GAWTC 4 cut(s) 467, 535, 1030, 1061
PkrI GCNGC 6 cut(s) 235, 314, 346, 460, 547, 607
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PshBI ATTAAT 1 cut(s) 101
Psp6I CCWGG 1 cut(s) 245
PspGI CCWGG 1 cut(s) 245
PspN4I GGNNCC 1 cut(s) 490
PspPI GGNCC 2 cut(s) 488, 868
PsuI RGATCY 1 cut(s) 220
PvuII CAGCTG 3 cut(s) 139, 461, 608
RsaI GTAC 1 cut(s) 325
RsaNI GTAC 1 cut(s) 324
RseI CAYNNNNRTG 1 cut(s) 258
SaqAI TTAA 7 cut(s) 66, 101, 734, 930, 945, 987, 1053
SatI GCNGC 6 cut(s) 234, 313, 345, 459, 546, 606
Sau3AI GATC 8 cut(s) 220, 287, 628, 724, 808, 883, 918, 1070
Sau96I GGNCC 2 cut(s) 488, 868
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 4 cut(s) 226, 247, 423, 424
SduI GDGCHC 1 cut(s) 652
SfcI CTRYAG 1 cut(s) 609
SmaI CCCGGG 1 cut(s) 424
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 1 cut(s) 590
SmoI CTYRAG 1 cut(s) 590
Sse9I AATT 2 cut(s) 55, 1039
SseBI AGGCCT 2 cut(s) 615, 717
SsiI CCGC 2 cut(s) 906, 1091
SspMI CTAG 2 cut(s) 203, 797
StuI AGGCCT 2 cut(s) 615, 717
StyD4I CCNGG 4 cut(s) 224, 245, 421, 422
TaaI ACNGT 5 cut(s) 187, 278, 308, 502, 696
TaiI ACGT 1 cut(s) 152
TaqI TCGA 5 cut(s) 618, 691, 831, 899, 1033
TasI AATT 2 cut(s) 55, 1039
TfiI GAWTC 4 cut(s) 467, 535, 1030, 1061
Tru1I TTAA 7 cut(s) 66, 101, 734, 930, 945, 987, 1053
Tru9I TTAA 7 cut(s) 66, 101, 734, 930, 945, 987, 1053
TscAI CASTG 2 cut(s) 190, 631
TseI GCWGC 6 cut(s) 233, 312, 344, 458, 545, 605
TspDTI ATGAA 2 cut(s) 174, 567
TspMI CCCGGG 1 cut(s) 422
TspRI CASTG 2 cut(s) 190, 631
VspI ATTAAT 1 cut(s) 101
XbaI TCTAGA 1 cut(s) 202
XcmI CCANNNNNNNNNTGG 1 cut(s) 988
XmaI CCCGGG 1 cut(s) 422
XmiI GTMKAC 1 cut(s) 7
XmnI GAANNNNTTC 1 cut(s) 558
XspI CTAG 2 cut(s) 203, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.