Prupe.6G162100_v2.0.a1

Zeaxanthin epoxidase, chloroplastic-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
15142147 .. 15145474
3328 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G162100.2

Sequence Viewer

Length: 1209 bp
ATGGAGGATGTGGTTATAGTTGGGGCAGGGATAGCAGGGTTGGCAACTGCAGTGGCGCTGAAGAGAGCTGGAGTTGAAGCGTTGGTGTTGGAGAGGTCGGAAGGCCTCAGAGCCACGGGCGCAGCTTTAACACTTTCCCGCAACGCTTGGGTTGCCCTTGATGCCTTGGGCATTTCCCAAAACCTCGCTCCCCTTTATGCCCCAATCAAAAAGGGATATATAACCAACCTGGATACTGGAGAAATCCAAGACGTTTCTTTTGTCGCCTCCAATGGTGATCCAGTTGGACCAAGATCAGTACACCGGAAAGCCTTACTCAATGCTTTGGCAGATCAATTGCCGATTAATTCAATCCGTTTCTCTTCCAAGCTCACTGCTATTGAGACCCAAGAACATGAAGGTTCATCTATTTCCATTATTCACATGGCAGATGGGACTGTCATCAAAGCAAAGGTTCTGATAGGCTGTGATGGGGTGCACTCAGTGGTGGCACGCTGGTTAGGACTTGCCGAACCAGTCTATTCAGGTCGATCAGCGGTTCGTGGCTTGGCTGTGTTTCCTCAAGGTCATGGACTGGACAACAACGTGCAACAATATTTAGGACTAGGAAGAAGGGCTGGTTTTGTTCCCCTCAATGACAAAGAGATCTATTGGTTTTTCACTTGCACCTCTCCAGCTAAAGGGGCAGATATGGTAGATGAACCCGAAGTTATAAAAAGAGAAGTGATTGAGAATTATGCCAAGGACCTTCCTCCTATATACCTAGACGTTGTGCAGCACTCGGATCTTTCAGCATTGACATGGGCTCCACTAATGTTCAGGTATCCATGGCATGTAGTATTTGGGAACTTAAGCAAGCAAAACATCACGGTGGCTGGCGATGCCATGCACCCCATGACACCTGATTTAGCGCAAGGAGGTTGCTCAGCATTAGAGGATGCAGTGGTTTTAGGCAGACACATAGGGAAGTCCTTTATACAAAATGGACAACTGGTGCCAAAAGAGATGGCAGTTACAATTGGAAAATATGTGGAAGAAAGAAGGTGGCGCGTCGCTTTGTTGATCGCAGGGTCATATTTATCAGGATGGGTGCAGCAGGCAGGGTCTGGATGGGGTATGAAGTTCTTGAGGGATGCCATATTTTACAGGTTCTTTTACCTTATAATCATTAAATTTACACGTTATGATTGTGGAAAACTTAATTTCTAG

Protein Analysis

403

Amino Acids

43.81

Weight (kDa)

7.7

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 713, 1163
AccB1I GGYRCC 1 cut(s) 994
AccII CGCG 1 cut(s) 1050
AciI CCGC 2 cut(s) 139, 536
AclWI GGATC 2 cut(s) 272, 792
AcsI RAATTY 1 cut(s) 1172
AcuI CTGAAG 1 cut(s) 80
AdeI CACNNNGTG 1 cut(s) 484
AfaI GTAC 1 cut(s) 300
AfiI CCNNNNNNNGG 1 cut(s) 680
AflII CTTAAG 1 cut(s) 850
AflIII ACRYGT 1 cut(s) 1178
AgsI TTSAA 2 cut(s) 77, 351
AjnI CCWGG 1 cut(s) 228
AluBI AGCT 4 cut(s) 68, 125, 370, 677
AluI AGCT 4 cut(s) 68, 125, 370, 677
Alw21I GWGCWC 1 cut(s) 480
Alw26I GTCTC 1 cut(s) 377
Alw44I GTGCAC 1 cut(s) 476
AlwI GGATC 2 cut(s) 272, 792
AlwNI CAGNNNCTG 1 cut(s) 1106
AoxI GGCC 1 cut(s) 103
ApaLI GTGCAC 1 cut(s) 476
ApeKI GCWGC 3 cut(s) 122, 775, 1093
ApoI RAATTY 1 cut(s) 1172
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
AseI ATTAAT 1 cut(s) 345
AspLEI GCGC 4 cut(s) 58, 122, 913, 1050
AspS9I GGNCC 2 cut(s) 287, 745
AsuHPI GGTGA 1 cut(s) 287
AvaII GGWCC 2 cut(s) 287, 745
BaeGI GKGCMC 1 cut(s) 480
BanI GGYRCC 1 cut(s) 994
BanII GRGCYC 1 cut(s) 808
Bbv12I GWGCWC 1 cut(s) 480
BbvI GCAGC 3 cut(s) 134, 787, 1105
BccI CCATC 5 cut(s) 425, 464, 1000, 1080, 1104
BciT130I CCWGG 1 cut(s) 230
BciVI GTATCC 2 cut(s) 226, 834
BcoDI GTCTC 1 cut(s) 377
BfaI CTAG 3 cut(s) 605, 764, 1207
BfmI CTRYAG 1 cut(s) 48
BfoI RGCGCY 1 cut(s) 59
BfrI CTTAAG 1 cut(s) 850
BfuI GTATCC 2 cut(s) 226, 834
BglII AGATCT 1 cut(s) 645
BisI GCNGC 3 cut(s) 123, 776, 1094
BlpI GCTNAGC 1 cut(s) 925
BlsI GCNGC 3 cut(s) 124, 777, 1095
Bme1390I CCNGG 1 cut(s) 230
Bme18I GGWCC 2 cut(s) 287, 745
BmgT120I GGNCC 2 cut(s) 287, 745
BmiI GGNNCC 2 cut(s) 807, 996
BmrFI CCNGG 1 cut(s) 230
BmsI GCATC 4 cut(s) 151, 871, 928, 1123
BpmI CTGGAG 3 cut(s) 90, 258, 657
Bpu1102I GCTNAGC 1 cut(s) 925
BpuEI CTTGAG 2 cut(s) 546, 1147
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 4 cut(s) 114, 165, 741, 827
BsaWI WCCGGW 1 cut(s) 303
BsaXI ACNNNNNCTCC 2 cut(s) 790, 820
Bsc4I CCNNNNNNNGG 1 cut(s) 680
Bse1I ACTGG 5 cut(s) 241, 281, 515, 579, 996
BseBI CCWGG 1 cut(s) 230
BseDI CCNNGG 4 cut(s) 114, 165, 741, 827
BseGI GGATG 5 cut(s) 13, 943, 1091, 1115, 1138
BseLI CCNNNNNNNGG 1 cut(s) 680
BseMII CTCAG 3 cut(s) 121, 495, 939
BseNI ACTGG 5 cut(s) 241, 281, 515, 579, 996
BseSI GKGCMC 1 cut(s) 480
BseXI GCAGC 3 cut(s) 134, 787, 1105
BsgI GTGCAG 2 cut(s) 794, 1112
Bsh1236I CGCG 1 cut(s) 1050
BshFI GGCC 1 cut(s) 105
BshNI GGYRCC 1 cut(s) 994
BsiHKAI GWGCWC 1 cut(s) 480
BsiSI CCGG 1 cut(s) 304
BslFI GGGAC 1 cut(s) 448
BslI CCNNNNNNNGG 1 cut(s) 680
BsmAI GTCTC 1 cut(s) 377
BsmFI GGGAC 1 cut(s) 448
BsnI GGCC 1 cut(s) 105
Bso31I GGTCTC 1 cut(s) 377
Bsp1286I GDGCHC 2 cut(s) 480, 808
Bsp143I GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
Bsp1720I GCTNAGC 1 cut(s) 925
Bsp19I CCATGG 1 cut(s) 827
BspACI CCGC 2 cut(s) 139, 536
BspANI GGCC 1 cut(s) 105
BspCNI CTCAG 3 cut(s) 120, 494, 938
BspFNI CGCG 1 cut(s) 1050
BspLI GGNNCC 2 cut(s) 807, 996
BspMAI CTGCAG 1 cut(s) 52
BspPI GGATC 2 cut(s) 272, 792
BspT107I GGYRCC 1 cut(s) 994
BspTI CTTAAG 1 cut(s) 850
BspTNI GGTCTC 1 cut(s) 377
BsrI ACTGG 5 cut(s) 241, 281, 515, 579, 996
BssECI CCNNGG 4 cut(s) 114, 165, 741, 827
BssMI GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
BssT1I CCWWGG 3 cut(s) 165, 741, 827
Bst2UI CCWGG 1 cut(s) 230
Bst4CI ACNGT 2 cut(s) 439, 871
Bst6I CTCTTC 2 cut(s) 56, 367
BstAFI CTTAAG 1 cut(s) 850
BstC8I GCNNGC 4 cut(s) 493, 857, 877, 1098
BstDEI CTNAG 3 cut(s) 107, 481, 925
BstDSI CCRYGG 2 cut(s) 114, 827
BstF5I GGATG 5 cut(s) 13, 943, 1091, 1115, 1138
BstFNI CGCG 1 cut(s) 1050
BstH2I RGCGCY 1 cut(s) 59
BstHHI GCGC 4 cut(s) 58, 122, 913, 1050
BstKTI GATC 7 cut(s) 280, 296, 334, 533, 648, 787, 1065
BstMAI GTCTC 1 cut(s) 377
BstMBI GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
BstMWI GCNNNNNNNGC 7 cut(s) 32, 41, 119, 152, 161, 683, 881
BstNI CCWGG 1 cut(s) 230
BstNSI RCATGY 1 cut(s) 836
BstSCI CCNGG 1 cut(s) 228
BstSFI CTRYAG 1 cut(s) 48
BstSLI GKGCMC 1 cut(s) 480
BstUI CGCG 1 cut(s) 1050
BstV1I GCAGC 3 cut(s) 134, 787, 1105
BstX2I RGATCY 2 cut(s) 645, 784
BstYI RGATCY 2 cut(s) 645, 784
BsuI GTATCC 2 cut(s) 226, 834
BsuRI GGCC 1 cut(s) 105
BtgI CCRYGG 2 cut(s) 114, 827
BtgZI GCGATG 1 cut(s) 894
BtsCI GGATG 5 cut(s) 13, 943, 1091, 1115, 1138
BtsI GCAGTG 3 cut(s) 57, 372, 948
BtsIMutI CAGTG 4 cut(s) 57, 372, 489, 948
Cac8I GCNNGC 4 cut(s) 493, 857, 877, 1098
CaiI CAGNNNCTG 1 cut(s) 1106
CfoI GCGC 4 cut(s) 58, 122, 913, 1050
Cfr13I GGNCC 2 cut(s) 287, 745
CseI GACGC 1 cut(s) 1039
Csp6I GTAC 1 cut(s) 299
CspCI CAANNNNNGTGG 2 cut(s) 33, 68
CviAII CATG 8 cut(s) 395, 424, 569, 801, 828, 833, 886, 895
CviQI GTAC 1 cut(s) 299
DdeI CTNAG 3 cut(s) 107, 481, 925
DpnI GATC 7 cut(s) 279, 295, 333, 532, 647, 786, 1064
DpnII GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
DraIII CACNNNGTG 1 cut(s) 484
Eam1104I CTCTTC 2 cut(s) 56, 367
EarI CTCTTC 2 cut(s) 56, 367
Eco130I CCWWGG 3 cut(s) 165, 741, 827
Eco147I AGGCCT 1 cut(s) 105
Eco24I GRGCYC 1 cut(s) 808
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 2 cut(s) 287, 745
Eco57I CTGAAG 1 cut(s) 80
EcoO109I RGGNCCY 1 cut(s) 745
EcoRII CCWGG 1 cut(s) 228
EcoT14I CCWWGG 3 cut(s) 165, 741, 827
EcoT38I GRGCYC 1 cut(s) 808
ErhI CCWWGG 3 cut(s) 165, 741, 827
FaeI CATG 8 cut(s) 398, 427, 572, 804, 831, 836, 889, 898
FaqI GGGAC 1 cut(s) 448
FatI CATG 8 cut(s) 394, 423, 568, 800, 827, 832, 885, 894
FauI CCCGC 1 cut(s) 146
Fnu4HI GCNGC 3 cut(s) 123, 776, 1094
FokI GGATG 5 cut(s) 20, 950, 1098, 1122, 1145
FriOI GRGCYC 1 cut(s) 808
Fsp4HI GCNGC 3 cut(s) 123, 776, 1094
FspBI CTAG 3 cut(s) 605, 764, 1207
GlaI GCGC 4 cut(s) 57, 121, 912, 1049
GluI GCNGC 3 cut(s) 123, 776, 1094
GsuI CTGGAG 3 cut(s) 90, 258, 657
HaeII RGCGCY 1 cut(s) 59
HaeIII GGCC 1 cut(s) 105
HapII CCGG 1 cut(s) 304
HgaI GACGC 1 cut(s) 1039
HhaI GCGC 4 cut(s) 58, 122, 913, 1050
Hin1II CATG 8 cut(s) 398, 427, 572, 804, 831, 836, 889, 898
Hin6I GCGC 4 cut(s) 56, 120, 911, 1048
HinP1I GCGC 4 cut(s) 56, 120, 911, 1048
HpaII CCGG 1 cut(s) 304
HphI GGTGA 1 cut(s) 287
Hpy166II GTNNAC 2 cut(s) 301, 478
Hpy188I TCNGA 4 cut(s) 100, 110, 459, 784
Hpy188III TCNNGA 3 cut(s) 1083, 1107, 1126
Hpy8I GTNNAC 2 cut(s) 301, 478
Hpy99I CGWCG 1 cut(s) 1055
HpyAV CCTTC 5 cut(s) 95, 392, 606, 758, 1035
HpyCH4III ACNGT 2 cut(s) 439, 871
HpyCH4IV ACGT 4 cut(s) 252, 585, 768, 1180
HpyCH4V TGCA 8 cut(s) 50, 478, 589, 666, 775, 889, 941, 1093
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 41, 119, 152, 161, 683, 881
HpyF3I CTNAG 3 cut(s) 107, 481, 925
HpySE526I ACGT 4 cut(s) 252, 585, 768, 1180
Hsp92II CATG 8 cut(s) 398, 427, 572, 804, 831, 836, 889, 898
HspAI GCGC 4 cut(s) 56, 120, 911, 1048
Kzo9I GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
LmnI GCTCC 2 cut(s) 193, 811
Lsp1109I GCAGC 3 cut(s) 134, 787, 1105
LweI GCATC 4 cut(s) 151, 871, 928, 1123
MaeI CTAG 3 cut(s) 605, 764, 1207
MaeII ACGT 4 cut(s) 252, 585, 768, 1180
MaeIII GTNAC 1 cut(s) 1012
MalI GATC 7 cut(s) 279, 295, 333, 532, 647, 786, 1064
MboI GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
MboII GAAGA 4 cut(s) 73, 354, 621, 1046
MfeI CAATTG 2 cut(s) 335, 1017
MflI RGATCY 2 cut(s) 645, 784
MhlI GDGCHC 2 cut(s) 480, 808
MluCI AATT 6 cut(s) 335, 346, 733, 1017, 1172, 1201
MmeI TCCRAC 3 cut(s) 69, 78, 265
MseI TTAA 5 cut(s) 128, 345, 851, 1170, 1200
MslI CAYNNNNRTG 2 cut(s) 799, 869
MspA1I CMGCKG 1 cut(s) 536
MspCI CTTAAG 1 cut(s) 850
MspI CCGG 1 cut(s) 304
MspR9I CCNGG 1 cut(s) 230
MunI CAATTG 2 cut(s) 335, 1017
MvaI CCWGG 1 cut(s) 230
MvnI CGCG 1 cut(s) 1050
MwoI GCNNNNNNNGC 7 cut(s) 32, 41, 119, 152, 161, 683, 881
NcoI CCATGG 1 cut(s) 827
NdeII GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
NlaIII CATG 8 cut(s) 398, 427, 572, 804, 831, 836, 889, 898
NlaIV GGNNCC 2 cut(s) 807, 996
NspI RCATGY 1 cut(s) 836
PceI AGGCCT 1 cut(s) 105
PkrI GCNGC 3 cut(s) 124, 777, 1095
PpuMI RGGWCCY 1 cut(s) 745
PshBI ATTAAT 1 cut(s) 345
PsiI TTATAA 2 cut(s) 713, 1163
Psp5II RGGWCCY 1 cut(s) 745
Psp6I CCWGG 1 cut(s) 228
PspGI CCWGG 1 cut(s) 228
PspN4I GGNNCC 2 cut(s) 807, 996
PspPI GGNCC 2 cut(s) 287, 745
PspPPI RGGWCCY 1 cut(s) 745
PstI CTGCAG 1 cut(s) 52
PstNI CAGNNNCTG 1 cut(s) 1106
PsuI RGATCY 2 cut(s) 645, 784
RsaI GTAC 1 cut(s) 300
RsaNI GTAC 1 cut(s) 299
RseI CAYNNNNRTG 2 cut(s) 799, 869
SaqAI TTAA 5 cut(s) 128, 345, 851, 1170, 1200
SatI GCNGC 3 cut(s) 123, 776, 1094
Sau3AI GATC 7 cut(s) 277, 293, 331, 530, 645, 784, 1062
Sau96I GGNCC 2 cut(s) 287, 745
ScrFI CCNGG 1 cut(s) 230
SduI GDGCHC 2 cut(s) 480, 808
SfaNI GCATC 4 cut(s) 151, 871, 928, 1123
SfcI CTRYAG 1 cut(s) 48
SinI GGWCC 2 cut(s) 287, 745
SmiMI CAYNNNNRTG 2 cut(s) 799, 869
SmlI CTYRAG 3 cut(s) 561, 850, 1126
SmoI CTYRAG 3 cut(s) 561, 850, 1126
Sse9I AATT 6 cut(s) 335, 346, 733, 1017, 1172, 1201
SseBI AGGCCT 1 cut(s) 105
SsiI CCGC 2 cut(s) 139, 536
SspI AATATT 1 cut(s) 596
SspMI CTAG 3 cut(s) 605, 764, 1207
StuI AGGCCT 1 cut(s) 105
StyD4I CCNGG 1 cut(s) 228
StyI CCWWGG 3 cut(s) 165, 741, 827
TaaI ACNGT 2 cut(s) 439, 871
TaiI ACGT 4 cut(s) 255, 588, 771, 1183
TaqI TCGA 1 cut(s) 529
TasI AATT 6 cut(s) 335, 346, 733, 1017, 1172, 1201
TatI WGTACW 1 cut(s) 298
Tru1I TTAA 5 cut(s) 128, 345, 851, 1170, 1200
Tru9I TTAA 5 cut(s) 128, 345, 851, 1170, 1200
TscAI CASTG 4 cut(s) 57, 379, 489, 948
TseI GCWGC 3 cut(s) 122, 775, 1093
TspDTI ATGAA 4 cut(s) 393, 411, 714, 1133
TspGWI ACGGA 1 cut(s) 344
TspRI CASTG 4 cut(s) 57, 379, 489, 948
Vha464I CTTAAG 1 cut(s) 850
VneI GTGCAC 1 cut(s) 476
VpaK11BI GGWCC 2 cut(s) 287, 745
VspI ATTAAT 1 cut(s) 345
XapI RAATTY 1 cut(s) 1172
XceI RCATGY 1 cut(s) 836
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XspI CTAG 3 cut(s) 605, 764, 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.