Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001290

Physical Location & Seq

Genomic Coordinates Reverse (-)

25861354 .. 25863456

Gene Structure 2103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018142

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGGGCACAACCGTGGAGGATGTGGTGATAGTGGGAGGAGGGATAGCCGGGCTGGCGACGGCGGTGGCGCTAAAGAGAGCTGGAATAGAAGCATTGGTGTTGGAGAGATCGGAAGGGCTGCGAGCCACCGGTGCAGCCTTGACTCTATTCCCAAACGCCTGGGTCGCTCTTGATGCCTTGGGGGTTTCTCATAAGCTTGCTTCATATACCTCCTCTCTCAAGGGATATGTGACTGATGTTGATACTGGAGAAGTTCAAGAAATCTCTTTCACCAAAGCCAATGGTGATGCAGTTGGACCGAGATCAGTACACCGGAAAGCCTTGCTCGAGGCTTTGGCAGATGAATTACCTGTTCATTCAATCCGTTTCTCTTCCAAGATCTCCGCTATCGAAACCCAACAACATGAAGGACTCTCTGAACCGGTCCTTTCAGGTCGATCAGCTGTTCGTGGCTTAGCTGTGTATCCTCAAGGCCATGGACTCGAGAAGAACGTGCAACAGTATGTAGGATCAGGTAGAAGGGCTGGCTTTGTTCCCCTCACCGACAAAGAGATCTACTGGTTCTTCAGTTGTACATCTCCGGCTAAAGGGACCTTCCTGGCAGAACATCCGGAAGATATACAAAAAGAAGTACTTGAGAATCATGCCAAGGACCTCCCACCTATATTCTCAGATGTTGTGCAGCATTCAGATCTTTCGACATTAACATGGGCTCCGCTGAAGTTTAGGTATCCCTGGAACGTAGTGTTTGGGAACTTAAGCAAGCAAAACATCACGGTGGCCGGCGATGCCATGCGGGTCATGACACCTGACCTAGCACAGGGGGGTTGCTCATCATTAGAAGATGCAGTGATCTTAGGCAGGCATATTGGGACATCCTTTGTAAAAAATGGACGAGTACTTGTGCAGAAAGAGATGAGTGAAGTATTGGGCAAATATGTGGAAGAAAGAAGGTGGCTCGTCGCTTTGTTGATCACTGGATCATACATATCAGGATGGATGCAGCAGGCAGGCTCTGGATGGGGTATGAAATTCTTGAGAGACGCCATATTTTACAAGTTCCTTTTCCCTAGGATGGTTAGATACGTATACTATGACAGTGGAAAACTCGACTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

373

Amino Acids

40.66

Weight (kDa)

6.77

Isoelectric Point (pI)

39.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	7 - 131	1.3e-09	FAD binding domain
DAO	PF01266	7 - 54	6.9e-09	FAD dependent oxidoreductase
NAD_binding_8	PF13450	10 - 40	6.8e-06	NAD(P)-binding Rossmann-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001290)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23740 FvH4_1g23750 FvH4_1g23770
malus_domestica	MD11G1231700.v1.1 MD11G1231900.v1.1
prunus_persica	Prupe.6G162100_v2.0.a1
pyrus_communis	pycom11g20520
rosa_chinensis	RchiOBHm_Chr2g0119591 RchiOBHm_Chr2g0119621 RchiOBHm_Chr2g0119641 RchiOBHm_Chr5g0013091
rosa_laevigata	RLG00000018140 RLG00000018142 RLG00000018474 RLG00000018477 RLG00000018479 RLG00000018481 RLG00000018482 RLG00000031985
rosa_multiflora	Rmu_sc0000825.1_g000006 Rmu_sc0000825.1_g000015 Rmu_sc0003158.1_g000005 Rmu_sc0003892.1_g000012 Rmu_sc0027906.1_g000001 Rmu_sc0040685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063490 Rroxscaffold_2G00124140 Rroxscaffold_2G00124230 Rroxscaffold_2G00124240 Rroxscaffold_2G00124250
rosa_rugosa	Rorug02G0222300 Rorug02G0222400 Rorug02G0222400 Rorug02G0222400 Rorug02G0222500.1 Rorug02G0223100 Rorug05G0007200
rosa_samantha	Rh2AG279800 Rh2AG280300 Rh2BG291500 Rh2BG291900 Rh2DG286500 Rh2DG286900 Rh2DG287300 Rh2DG305700 Rh2DG305900 Rh2DG306000 Rh5AG101300 Rh5BG097800 Rh5CG109900 Rh5DG096900
rosa_wichuraiana	Rw2G022360 Rw2G022400 Rw2G022410 Rw5G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1089
AccIII	TCCGGA	1 cut(s)	610
AciI	CCGC	4 cut(s)	62, 384, 716, 796
AclWI	GGATC	2 cut(s)	517, 988
AcoI	YGGCCR	1 cut(s)	780
AcsI	RAATTY	1 cut(s)	1031
AcuI	CTGAAG	2 cut(s)	550, 740
AcyI	GRCGYC	1 cut(s)	1044
AfaI	GTAC	4 cut(s)	309, 574, 633, 900
AfiI	CCNNNNNNNGG	3 cut(s)	587, 820, 1075
AflII	CTTAAG	1 cut(s)	757
AgeI	ACCGGT	2 cut(s)	128, 421
AgsI	TTSAA	2 cut(s)	257, 360
AjnI	CCWGG	3 cut(s)	158, 597, 734
AleI	CACNNNNGTG	1 cut(s)	11
AluBI	AGCT	4 cut(s)	80, 196, 443, 458
AluI	AGCT	4 cut(s)	80, 196, 443, 458
Alw26I	GTCTC	1 cut(s)	1035
AlwI	GGATC	2 cut(s)	517, 988
AlwNI	CAGNNNCTG	1 cut(s)	1016
Ama87I	CYCGRG	2 cut(s)	326, 482
Aor13HI	TCCGGA	1 cut(s)	610
AoxI	GGCC	2 cut(s)	472, 780
ApeKI	GCWGC	4 cut(s)	118, 134, 682, 1003
ApoI	RAATTY	1 cut(s)	1031
AsiGI	ACCGGT	2 cut(s)	128, 421
AspA2I	CCTAGG	1 cut(s)	1070
AspLEI	GCGC	1 cut(s)	70
AspS9I	GGNCC	4 cut(s)	296, 424, 591, 652
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	4 cut(s)	37, 262, 296, 532
AvaI	CYCGRG	2 cut(s)	326, 482
AvaII	GGWCC	4 cut(s)	296, 424, 591, 652
AvrII	CCTAGG	1 cut(s)	1070
BaeGI	GKGCMC	1 cut(s)	8
BanII	GRGCYC	1 cut(s)	715
BbvI	GCAGC	4 cut(s)	105, 146, 694, 1015
BccI	CCATC	3 cut(s)	990, 1014, 1069
BceAI	ACGGC	1 cut(s)	75
BciT130I	CCWGG	3 cut(s)	160, 599, 736
BciVI	GTATCC	2 cut(s)	474, 741
BclI	TGATCA	1 cut(s)	972
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	1 cut(s)	1035
BfaI	CTAG	3 cut(s)	815, 1071, 1117
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	1 cut(s)	757
BfuI	GTATCC	2 cut(s)	474, 741
BglI	GCCNNNNNGGC	1 cut(s)	53
BglII	AGATCT	3 cut(s)	378, 552, 691
BisI	GCNGC	4 cut(s)	119, 135, 683, 1004
BlnI	CCTAGG	1 cut(s)	1070
BlpI	GCTNAGC	1 cut(s)	454
BlsI	GCNGC	4 cut(s)	120, 136, 684, 1005
BmcAI	AGTACT	2 cut(s)	633, 900
Bme1390I	CCNGG	4 cut(s)	49, 160, 599, 736
Bme18I	GGWCC	4 cut(s)	296, 424, 591, 652
BmeT110I	CYCGRG	2 cut(s)	326, 482
BmgT120I	GGNCC	4 cut(s)	296, 424, 591, 652
BmiI	GGNNCC	2 cut(s)	592, 714
BmrFI	CCNGG	4 cut(s)	49, 160, 599, 736
BmsI	GCATC	5 cut(s)	163, 277, 778, 835, 990
BpmI	CTGGAG	1 cut(s)	267
Bpu1102I	GCTNAGC	1 cut(s)	454
BpuEI	CTTGAG	4 cut(s)	203, 453, 656, 1057
BpuMI	CCSGG	1 cut(s)	49
BsaAI	YACGTR	1 cut(s)	1087
BsaHI	GRCGYC	1 cut(s)	1044
BsaJI	CCNNGG	7 cut(s)	12, 159, 177, 475, 648, 734, 1070
BsaWI	WCCGGW	4 cut(s)	128, 312, 421, 610
BsaXI	ACNNNNNCTCC	2 cut(s)	697, 727
Bsc4I	CCNNNNNNNGG	3 cut(s)	587, 820, 1075
Bse118I	RCCGGY	3 cut(s)	128, 421, 782
Bse1I	ACTGG	3 cut(s)	250, 563, 982
BseAI	TCCGGA	1 cut(s)	610
BseBI	CCWGG	3 cut(s)	160, 599, 736
BseDI	CCNNGG	7 cut(s)	12, 159, 177, 475, 648, 734, 1070
BseGI	GGATG	7 cut(s)	25, 607, 875, 1001, 1005, 1025, 1080
BseLI	CCNNNNNNNGG	3 cut(s)	587, 820, 1075
BseMII	CTCAG	1 cut(s)	684
BseNI	ACTGG	3 cut(s)	250, 563, 982
BseRI	GAGGAG	2 cut(s)	51, 202
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	4 cut(s)	105, 146, 694, 1015
BsgI	GTGCAG	3 cut(s)	153, 701, 926
BshFI	GGCC	2 cut(s)	474, 782
BshTI	ACCGGT	2 cut(s)	128, 421
BsiHKCI	CYCGRG	2 cut(s)	326, 482
BsiSI	CCGG	7 cut(s)	48, 129, 313, 422, 581, 611, 783
BslFI	GGGAC	2 cut(s)	604, 886
BslI	CCNNNNNNNGG	3 cut(s)	587, 820, 1075
BsmAI	GTCTC	1 cut(s)	1035
BsmBI	CGTCTC	1 cut(s)	1035
BsmFI	GGGAC	2 cut(s)	604, 886
BsmI	GAATGC	1 cut(s)	685
BsnI	GGCC	2 cut(s)	474, 782
BsoBI	CYCGRG	2 cut(s)	326, 482
Bsp1286I	GDGCHC	2 cut(s)	8, 715
Bsp13I	TCCGGA	1 cut(s)	610
Bsp1407I	TGTACA	1 cut(s)	572
Bsp1720I	GCTNAGC	1 cut(s)	454
Bsp19I	CCATGG	1 cut(s)	475
BspACI	CCGC	4 cut(s)	62, 384, 716, 796
BspANI	GGCC	2 cut(s)	474, 782
BspCNI	CTCAG	1 cut(s)	683
BspEI	TCCGGA	1 cut(s)	610
BspHI	TCATGA	1 cut(s)	801
BspLI	GGNNCC	2 cut(s)	592, 714
BspPI	GGATC	2 cut(s)	517, 988
BspTI	CTTAAG	1 cut(s)	757
BsrFI	RCCGGY	3 cut(s)	128, 421, 782
BsrGI	TGTACA	1 cut(s)	572
BsrI	ACTGG	3 cut(s)	250, 563, 982
BssAI	RCCGGY	3 cut(s)	128, 421, 782
BssECI	CCNNGG	7 cut(s)	12, 159, 177, 475, 648, 734, 1070
BssNAI	GTATAC	1 cut(s)	1090
BssNI	GRCGYC	1 cut(s)	1044
BssT1I	CCWWGG	4 cut(s)	177, 475, 648, 1070
Bst1107I	GTATAC	1 cut(s)	1090
Bst2UI	CCWGG	3 cut(s)	160, 599, 736
Bst4CI	ACNGT	4 cut(s)	13, 501, 778, 1100
Bst6I	CTCTTC	1 cut(s)	376
BstACI	GRCGYC	1 cut(s)	1044
BstAFI	CTTAAG	1 cut(s)	757
BstAUI	TGTACA	1 cut(s)	572
BstBAI	YACGTR	1 cut(s)	1087
BstC8I	GCNNGC	9 cut(s)	54, 123, 198, 526, 764, 784, 863, 1008, 1012
BstDEI	CTNAG	3 cut(s)	454, 670, 856
BstDSI	CCRYGG	2 cut(s)	12, 475
BstENI	CCTNNNNNAGG	1 cut(s)	818
BstF5I	GGATG	7 cut(s)	25, 607, 875, 1001, 1005, 1025, 1080
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	1 cut(s)	70
BstMAI	GTCTC	1 cut(s)	1035
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 131, 164, 173, 788
BstNI	CCWGG	3 cut(s)	160, 599, 736
BstSCI	CCNGG	4 cut(s)	47, 158, 597, 734
BstSLI	GKGCMC	1 cut(s)	8
BstSNI	TACGTA	1 cut(s)	1087
BstV1I	GCAGC	4 cut(s)	105, 146, 694, 1015
BstX2I	RGATCY	3 cut(s)	378, 552, 691
BstXI	CCANNNNNNTGG	1 cut(s)	159
BstYI	RGATCY	3 cut(s)	378, 552, 691
BstZ17I	GTATAC	1 cut(s)	1090
BsuI	GTATCC	2 cut(s)	474, 741
BsuRI	GGCC	2 cut(s)	474, 782
BtgI	CCRYGG	2 cut(s)	12, 475
BtgZI	GCGATG	1 cut(s)	801
BtsCI	GGATG	7 cut(s)	25, 607, 875, 1001, 1005, 1025, 1080
BtsI	GCAGTG	1 cut(s)	855
BtsIMutI	CAGTG	3 cut(s)	855, 975, 1105
Cac8I	GCNNGC	9 cut(s)	54, 123, 198, 526, 764, 784, 863, 1008, 1012
CaiI	CAGNNNCTG	1 cut(s)	1016
CciI	TCATGA	1 cut(s)	801
CfoI	GCGC	1 cut(s)	70
Cfr10I	RCCGGY	3 cut(s)	128, 421, 782
Cfr13I	GGNCC	4 cut(s)	296, 424, 591, 652
CseI	GACGC	1 cut(s)	1052
Csp6I	GTAC	4 cut(s)	308, 573, 632, 899
CspAI	ACCGGT	2 cut(s)	128, 421
CviAII	CATG	6 cut(s)	404, 476, 644, 708, 793, 802
CviQI	GTAC	4 cut(s)	308, 573, 632, 899
DdeI	CTNAG	3 cut(s)	454, 670, 856
EaeI	YGGCCR	1 cut(s)	780
Eam1104I	CTCTTC	1 cut(s)	376
EarI	CTCTTC	1 cut(s)	376
Eco105I	TACGTA	1 cut(s)	1087
Eco130I	CCWWGG	4 cut(s)	177, 475, 648, 1070
Eco24I	GRGCYC	1 cut(s)	715
Eco47I	GGWCC	4 cut(s)	296, 424, 591, 652
Eco57I	CTGAAG	2 cut(s)	550, 740
Eco88I	CYCGRG	2 cut(s)	326, 482
EcoNI	CCTNNNNNAGG	1 cut(s)	818
EcoO109I	RGGNCCY	2 cut(s)	591, 652
EcoRII	CCWGG	3 cut(s)	158, 597, 734
EcoT14I	CCWWGG	4 cut(s)	177, 475, 648, 1070
EcoT38I	GRGCYC	1 cut(s)	715
ErhI	CCWWGG	4 cut(s)	177, 475, 648, 1070
Esp3I	CGTCTC	1 cut(s)	1035
FaeI	CATG	6 cut(s)	407, 479, 647, 711, 796, 805
FalI	AAGNNNNNCTT	2 cut(s)	618, 650
FaqI	GGGAC	2 cut(s)	604, 886
FatI	CATG	6 cut(s)	403, 475, 643, 707, 792, 801
FauI	CCCGC	1 cut(s)	789
FbaI	TGATCA	1 cut(s)	972
FblI	GTMKAC	1 cut(s)	1089
Fnu4HI	GCNGC	4 cut(s)	119, 135, 683, 1004
FokI	GGATG	7 cut(s)	32, 594, 862, 1008, 1012, 1032, 1087
FriOI	GRGCYC	1 cut(s)	715
Fsp4HI	GCNGC	4 cut(s)	119, 135, 683, 1004
FspBI	CTAG	3 cut(s)	815, 1071, 1117
GlaI	GCGC	1 cut(s)	69
GluI	GCNGC	4 cut(s)	119, 135, 683, 1004
GsuI	CTGGAG	1 cut(s)	267
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	2 cut(s)	474, 782
HapII	CCGG	7 cut(s)	48, 129, 313, 422, 581, 611, 783
HgaI	GACGC	1 cut(s)	1052
HhaI	GCGC	1 cut(s)	70
Hin1I	GRCGYC	1 cut(s)	1044
Hin1II	CATG	6 cut(s)	407, 479, 647, 711, 796, 805
Hin6I	GCGC	1 cut(s)	68
HinP1I	GCGC	1 cut(s)	68
HindIII	AAGCTT	1 cut(s)	194
HinfI	GANTC	4 cut(s)	142, 411, 480, 640
HpaII	CCGG	7 cut(s)	48, 129, 313, 422, 581, 611, 783
HphI	GGTGA	4 cut(s)	37, 262, 296, 532
Hpy166II	GTNNAC	2 cut(s)	310, 1090
Hpy188I	TCNGA	4 cut(s)	112, 418, 673, 691
Hpy188III	TCNNGA	8 cut(s)	170, 257, 484, 611, 802, 993, 1017, 1036
Hpy8I	GTNNAC	2 cut(s)	310, 1090
Hpy99I	CGWCG	2 cut(s)	61, 965
HpyAV	CCTTC	5 cut(s)	107, 401, 513, 604, 945
HpyCH4III	ACNGT	4 cut(s)	13, 501, 778, 1100
HpyCH4IV	ACGT	3 cut(s)	492, 741, 1086
HpyCH4V	TGCA	7 cut(s)	134, 290, 496, 682, 848, 907, 1003
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 131, 164, 173, 788
HpyF3I	CTNAG	3 cut(s)	454, 670, 856
HpySE526I	ACGT	3 cut(s)	492, 741, 1086
Hsp92I	GRCGYC	1 cut(s)	1044
Hsp92II	CATG	6 cut(s)	407, 479, 647, 711, 796, 805
HspAI	GCGC	1 cut(s)	68
Kpn2I	TCCGGA	1 cut(s)	610
KroI	GCCGGC	1 cut(s)	782
KroNI	GCCGGC	1 cut(s)	784
Ksp22I	TGATCA	1 cut(s)	972
LmnI	GCTCC	1 cut(s)	718
Lsp1109I	GCAGC	4 cut(s)	105, 146, 694, 1015
LweI	GCATC	5 cut(s)	163, 277, 778, 835, 990
MaeI	CTAG	3 cut(s)	815, 1071, 1117
MaeII	ACGT	3 cut(s)	492, 741, 1086
MaeIII	GTNAC	1 cut(s)	229
MboII	GAAGA	6 cut(s)	363, 499, 556, 626, 854, 956
MflI	RGATCY	3 cut(s)	378, 552, 691
MhlI	GDGCHC	2 cut(s)	8, 715
MluCI	AATT	2 cut(s)	344, 1031
MlyI	GAGTC	3 cut(s)	136, 405, 474
MmeI	TCCRAC	2 cut(s)	81, 274
MnlI	CCTC	9 cut(s)	10, 29, 32, 220, 223, 322, 477, 548, 665
MroI	TCCGGA	1 cut(s)	610
MroNI	GCCGGC	1 cut(s)	782
MseI	TTAA	2 cut(s)	704, 758
MslI	CAYNNNNRTG	3 cut(s)	11, 706, 776
MspA1I	CMGCKG	2 cut(s)	443, 718
MspCI	CTTAAG	1 cut(s)	757
MspI	CCGG	7 cut(s)	48, 129, 313, 422, 581, 611, 783
MspR9I	CCNGG	4 cut(s)	49, 160, 599, 736
Mva1269I	GAATGC	1 cut(s)	685
MvaI	CCWGG	3 cut(s)	160, 599, 736
MwoI	GCNNNNNNNGC	5 cut(s)	53, 131, 164, 173, 788
NaeI	GCCGGC	1 cut(s)	784
NciI	CCSGG	1 cut(s)	49
NcoI	CCATGG	1 cut(s)	475
NgoMIV	GCCGGC	1 cut(s)	782
NlaIII	CATG	6 cut(s)	407, 479, 647, 711, 796, 805
NlaIV	GGNNCC	2 cut(s)	592, 714
NmuCI	GTSAC	1 cut(s)	229
OliI	CACNNNNGTG	1 cut(s)	11
PaeR7I	CTCGAG	2 cut(s)	326, 482
PagI	TCATGA	1 cut(s)	801
PcsI	WCGNNNNNNNCGW	1 cut(s)	489
PctI	GAATGC	1 cut(s)	685
PdiI	GCCGGC	1 cut(s)	784
PfeI	GAWTC	1 cut(s)	640
PinAI	ACCGGT	2 cut(s)	128, 421
PkrI	GCNGC	4 cut(s)	120, 136, 684, 1005
PleI	GAGTC	3 cut(s)	136, 405, 474
PpsI	GAGTC	3 cut(s)	136, 405, 474
Ppu21I	YACGTR	1 cut(s)	1087
PpuMI	RGGWCCY	2 cut(s)	591, 652
Psp5II	RGGWCCY	2 cut(s)	591, 652
Psp6I	CCWGG	3 cut(s)	158, 597, 734
PspGI	CCWGG	3 cut(s)	158, 597, 734
PspN4I	GGNNCC	2 cut(s)	592, 714
PspPI	GGNCC	4 cut(s)	296, 424, 591, 652
PspPPI	RGGWCCY	2 cut(s)	591, 652
PspXI	VCTCGAGB	1 cut(s)	326
PstNI	CAGNNNCTG	1 cut(s)	1016
PsuI	RGATCY	3 cut(s)	378, 552, 691
PvuII	CAGCTG	1 cut(s)	443
RsaI	GTAC	4 cut(s)	309, 574, 633, 900
RsaNI	GTAC	4 cut(s)	308, 573, 632, 899
RseI	CAYNNNNRTG	3 cut(s)	11, 706, 776
SaqAI	TTAA	2 cut(s)	704, 758
SatI	GCNGC	4 cut(s)	119, 135, 683, 1004
Sau96I	GGNCC	4 cut(s)	296, 424, 591, 652
ScaI	AGTACT	2 cut(s)	633, 900
SchI	GAGTC	3 cut(s)	136, 405, 474
ScrFI	CCNGG	4 cut(s)	49, 160, 599, 736
SduI	GDGCHC	2 cut(s)	8, 715
SfaNI	GCATC	5 cut(s)	163, 277, 778, 835, 990
Sfr274I	CTCGAG	2 cut(s)	326, 482
SgrAI	CRCCGGYG	1 cut(s)	128
SinI	GGWCC	4 cut(s)	296, 424, 591, 652
SlaI	CTCGAG	2 cut(s)	326, 482
SmiMI	CAYNNNNRTG	3 cut(s)	11, 706, 776
SmlI	CTYRAG	7 cut(s)	218, 326, 468, 482, 635, 757, 1036
SmoI	CTYRAG	7 cut(s)	218, 326, 468, 482, 635, 757, 1036
SnaBI	TACGTA	1 cut(s)	1087
Sse9I	AATT	2 cut(s)	344, 1031
SsiI	CCGC	4 cut(s)	62, 384, 716, 796
SspMI	CTAG	3 cut(s)	815, 1071, 1117
StyD4I	CCNGG	4 cut(s)	47, 158, 597, 734
StyI	CCWWGG	4 cut(s)	177, 475, 648, 1070
TaaI	ACNGT	4 cut(s)	13, 501, 778, 1100
TaiI	ACGT	3 cut(s)	495, 744, 1089
TaqI	TCGA	6 cut(s)	327, 390, 436, 483, 698, 1110
TaqII	GACCGA	1 cut(s)	313
TasI	AATT	2 cut(s)	344, 1031
TatI	WGTACW	4 cut(s)	307, 572, 631, 898
TfiI	GAWTC	1 cut(s)	640
Tru1I	TTAA	2 cut(s)	704, 758
Tru9I	TTAA	2 cut(s)	704, 758
TscAI	CASTG	3 cut(s)	855, 982, 1105
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	4 cut(s)	118, 134, 682, 1003
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	5 cut(s)	192, 344, 357, 420, 1043
TspGWI	ACGGA	1 cut(s)	353
TspRI	CASTG	3 cut(s)	855, 982, 1105
Vha464I	CTTAAG	1 cut(s)	757
VpaK11BI	GGWCC	4 cut(s)	296, 424, 591, 652
XagI	CCTNNNNNAGG	1 cut(s)	818
XapI	RAATTY	1 cut(s)	1031
XhoI	CTCGAG	2 cut(s)	326, 482
XmaJI	CCTAGG	1 cut(s)	1070
XmiI	GTMKAC	1 cut(s)	1089
XspI	CTAG	3 cut(s)	815, 1071, 1117
ZrmI	AGTACT	2 cut(s)	633, 900

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.