Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001290

Physical Location & Seq

Genomic Coordinates Forward (+)

30454857 .. 30457296

Gene Structure 2440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018474

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGGGCACAACCGTGGAGGATGTGGTGATAGTGGGAGGAGGGATAGCCGGGCTGGCTACGGCGGTGGCGCTAAAGAGAGCTGGAATAGAAGCGTTGGTGTTGGAGAGATCGGAAGGGCTGCGAGCCACCGGTGCAGCCTTGACTCTATTCCCAAACGCCTGGGTCGCTCTTGATGCCTTGGGGGTTTCTCATAAGCTTGCTTCATATACCTCCTCTCTCAAGGGATATGTGACTGATGTTGATACTGGAGAAGTTCAAGAAATCTCTTTCACCAAAGCCAATGGTGATGCAGTTGGACCGAGATCAGTACACCGGAAAGCCTTGCTCGAGGCTTTGGCAGATGAATTACCTGTTCATTCAATCCGTTTCTCTTCCAAGATCTCCGCTATCGAAACCCAACAACATGAAGGTTCATCCATTGCCATTGTTCACATGGAAAATGGAACTGTCATTAAAGCAAAGGTTCTCATAGGTTGTGACGGGGTTCACTCAGTTGTGTCACGCTGGTTAGGACTCTCTGAACCGGTCCTTTCAGGTCGATCAGCTGTTCGTGGCTTAGCTGTGTATCCTCAAGGCCATGGACTCGAGAAGAACGTGCAACAGTATGTAGGATCAGGTAGAAGGGCTGGCTTTGTTCCCCTCACCGACAAAGAGATCTACTGGTTCTTCAGTTGTACATCTCCGGCTAAAGGGGCCTTCCTGGCAGAACATCCGGAAGATATACAAAAAGAAGTACTTGAGAATCATGCCAAGGACCTCCCACCTATATTCTCAGATGTTGTGCAGCATTCAGATCTTTCGACATTAACATGGGCTCCGCTGAAGTTTAGGTATCCCTGGAACGTAGTGTTTGGGAACTTAAGCAAGCAAAACATCACGGTGGCCGGCGATGCCATGCACCCCATGACACCTGACCTAGCACAGGGGGGTTGCTCATCATTAGAAGATGCAGTGATCTTAGGCAGGCATATTGGGACATCCTTTGTAAAAAATGGACGAGTACTTGTGCAGAAAGAGATGAGTGAAGTATTGGGCAAATATGTGGAAGAAAGAAGGTGGCGCGTCGCTTTGTTGATCACTGGATCATACATATCAGGATGGATGCAGCAGGCAGGCTCTGGATGGGGTATGAAATTCTTGAGAGACGCCATATTTTACAAGTTCCTTTTCCCTAGGATCAAAGGCGTAGCTACACAAGGGCTCCGGTGGGCTACAGCCCACCCCAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009540 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009743 GO:0009756 GO:0009941 GO:0009987 GO:0010033 GO:0010035 GO:0010114 GO:0010182 GO:0016053 GO:0016106 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0019752 GO:0023052 GO:0030104 GO:0031967 GO:0031975 GO:0032501 GO:0032787 GO:0042221 GO:0042440 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046148 GO:0046165 GO:0046394 GO:0048871 GO:0048878 GO:0050789 GO:0050794 GO:0050878 GO:0050891 GO:0050896 GO:0051716 GO:0052662 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

411

Amino Acids

44.43

Weight (kDa)

8.6

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	7 - 355	5.4e-26	FAD binding domain
DAO	PF01266	7 - 54	1.5e-07	FAD dependent oxidoreductase
Lycopene_cycl	PF05834	7 - 164	4.8e-06	Lycopene cyclase protein
NAD_binding_8	PF13450	10 - 40	7.9e-06	NAD(P)-binding Rossmann-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001290)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23740 FvH4_1g23750 FvH4_1g23770
malus_domestica	MD11G1231700.v1.1 MD11G1231900.v1.1
prunus_persica	Prupe.6G162100_v2.0.a1
pyrus_communis	pycom11g20520
rosa_chinensis	RchiOBHm_Chr2g0119591 RchiOBHm_Chr2g0119621 RchiOBHm_Chr2g0119641 RchiOBHm_Chr5g0013091
rosa_laevigata	RLG00000018140 RLG00000018142 RLG00000018474 RLG00000018477 RLG00000018479 RLG00000018481 RLG00000018482 RLG00000031985
rosa_multiflora	Rmu_sc0000825.1_g000006 Rmu_sc0000825.1_g000015 Rmu_sc0003158.1_g000005 Rmu_sc0003892.1_g000012 Rmu_sc0027906.1_g000001 Rmu_sc0040685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063490 Rroxscaffold_2G00124140 Rroxscaffold_2G00124230 Rroxscaffold_2G00124240 Rroxscaffold_2G00124250
rosa_rugosa	Rorug02G0222300 Rorug02G0222400 Rorug02G0222400 Rorug02G0222400 Rorug02G0222500.1 Rorug02G0223100 Rorug05G0007200
rosa_samantha	Rh2AG279800 Rh2AG280300 Rh2BG291500 Rh2BG291900 Rh2DG286500 Rh2DG286900 Rh2DG287300 Rh2DG305700 Rh2DG305900 Rh2DG306000 Rh5AG101300 Rh5BG097800 Rh5CG109900 Rh5DG096900
rosa_wichuraiana	Rw2G022360 Rw2G022400 Rw2G022410 Rw5G008850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	1062
AccIII	TCCGGA	1 cut(s)	712
AciI	CCGC	3 cut(s)	62, 384, 818
AclWI	GGATC	3 cut(s)	619, 1090, 1184
AcoI	YGGCCR	1 cut(s)	882
AcsI	RAATTY	2 cut(s)	1133, 1226
AcuI	CTGAAG	2 cut(s)	652, 842
AcyI	GRCGYC	1 cut(s)	1146
AfaI	GTAC	4 cut(s)	309, 676, 735, 1002
AfiI	CCNNNNNNNGG	2 cut(s)	689, 922
AflII	CTTAAG	1 cut(s)	859
AgeI	ACCGGT	2 cut(s)	128, 523
AgsI	TTSAA	2 cut(s)	257, 360
AjnI	CCWGG	3 cut(s)	158, 699, 836
AleI	CACNNNNGTG	1 cut(s)	11
AluBI	AGCT	5 cut(s)	80, 196, 545, 560, 1190
AluI	AGCT	5 cut(s)	80, 196, 545, 560, 1190
Alw26I	GTCTC	1 cut(s)	1137
AlwI	GGATC	3 cut(s)	619, 1090, 1184
AlwNI	CAGNNNCTG	1 cut(s)	1118
Ama87I	CYCGRG	2 cut(s)	326, 584
Aor13HI	TCCGGA	1 cut(s)	712
AoxI	GGCC	3 cut(s)	574, 693, 882
ApeKI	GCWGC	4 cut(s)	118, 134, 784, 1105
ApoI	RAATTY	2 cut(s)	1133, 1226
AsiGI	ACCGGT	2 cut(s)	128, 523
AspA2I	CCTAGG	1 cut(s)	1172
AspLEI	GCGC	2 cut(s)	70, 1062
AspS9I	GGNCC	4 cut(s)	296, 526, 693, 754
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	4 cut(s)	37, 262, 296, 634
AvaI	CYCGRG	2 cut(s)	326, 584
AvaII	GGWCC	3 cut(s)	296, 526, 754
AvrII	CCTAGG	1 cut(s)	1172
BaeGI	GKGCMC	1 cut(s)	8
BanII	GRGCYC	2 cut(s)	817, 1203
BbvI	GCAGC	4 cut(s)	105, 146, 796, 1117
BccI	CCATC	2 cut(s)	1092, 1116
BceAI	ACGGC	1 cut(s)	75
BciT130I	CCWGG	3 cut(s)	160, 701, 838
BciVI	GTATCC	2 cut(s)	576, 843
BclI	TGATCA	1 cut(s)	1074
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	1 cut(s)	1137
BfaI	CTAG	2 cut(s)	917, 1173
BfmI	CTRYAG	1 cut(s)	1212
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	1 cut(s)	859
BfuI	GTATCC	2 cut(s)	576, 843
BglI	GCCNNNNNGGC	2 cut(s)	53, 701
BglII	AGATCT	3 cut(s)	378, 654, 793
BisI	GCNGC	4 cut(s)	119, 135, 785, 1106
BlnI	CCTAGG	1 cut(s)	1172
BlpI	GCTNAGC	1 cut(s)	556
BlsI	GCNGC	4 cut(s)	120, 136, 786, 1107
BmcAI	AGTACT	2 cut(s)	735, 1002
Bme1390I	CCNGG	4 cut(s)	49, 160, 701, 838
Bme18I	GGWCC	3 cut(s)	296, 526, 754
BmeT110I	CYCGRG	2 cut(s)	326, 584
BmgT120I	GGNCC	4 cut(s)	296, 526, 693, 754
BmiI	GGNNCC	3 cut(s)	694, 816, 1202
BmrFI	CCNGG	4 cut(s)	49, 160, 701, 838
BmsI	GCATC	5 cut(s)	163, 277, 880, 937, 1092
BpmI	CTGGAG	1 cut(s)	267
Bpu1102I	GCTNAGC	1 cut(s)	556
BpuEI	CTTGAG	4 cut(s)	203, 555, 758, 1159
BpuMI	CCSGG	1 cut(s)	49
BsaHI	GRCGYC	1 cut(s)	1146
BsaJI	CCNNGG	7 cut(s)	12, 159, 177, 577, 750, 836, 1172
BsaWI	WCCGGW	5 cut(s)	128, 312, 523, 712, 1203
BsaXI	ACNNNNNCTCC	4 cut(s)	799, 829, 1185, 1215
Bsc4I	CCNNNNNNNGG	2 cut(s)	689, 922
Bse118I	RCCGGY	3 cut(s)	128, 523, 884
Bse1I	ACTGG	3 cut(s)	250, 665, 1084
Bse3DI	GCAATG	1 cut(s)	417
BseAI	TCCGGA	1 cut(s)	712
BseBI	CCWGG	3 cut(s)	160, 701, 838
BseDI	CCNNGG	7 cut(s)	12, 159, 177, 577, 750, 836, 1172
BseGI	GGATG	7 cut(s)	25, 413, 709, 977, 1103, 1107, 1127
BseLI	CCNNNNNNNGG	2 cut(s)	689, 922
BseMI	GCAATG	1 cut(s)	417
BseMII	CTCAG	2 cut(s)	504, 786
BseNI	ACTGG	3 cut(s)	250, 665, 1084
BseRI	GAGGAG	2 cut(s)	51, 202
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	4 cut(s)	105, 146, 796, 1117
BsgI	GTGCAG	3 cut(s)	153, 803, 1028
Bsh1236I	CGCG	1 cut(s)	1062
BshFI	GGCC	3 cut(s)	576, 695, 884
BshTI	ACCGGT	2 cut(s)	128, 523
BsiHKCI	CYCGRG	2 cut(s)	326, 584
BsiSI	CCGG	8 cut(s)	48, 129, 313, 524, 683, 713, 885, 1204
BslFI	GGGAC	1 cut(s)	988
BslI	CCNNNNNNNGG	2 cut(s)	689, 922
BsmAI	GTCTC	1 cut(s)	1137
BsmBI	CGTCTC	1 cut(s)	1137
BsmFI	GGGAC	1 cut(s)	988
BsmI	GAATGC	1 cut(s)	787
BsnI	GGCC	3 cut(s)	576, 695, 884
BsoBI	CYCGRG	2 cut(s)	326, 584
Bsp1286I	GDGCHC	3 cut(s)	8, 817, 1203
Bsp13I	TCCGGA	1 cut(s)	712
Bsp1407I	TGTACA	1 cut(s)	674
Bsp1720I	GCTNAGC	1 cut(s)	556
Bsp19I	CCATGG	1 cut(s)	577
BspACI	CCGC	3 cut(s)	62, 384, 818
BspANI	GGCC	3 cut(s)	576, 695, 884
BspCNI	CTCAG	2 cut(s)	503, 785
BspEI	TCCGGA	1 cut(s)	712
BspFNI	CGCG	1 cut(s)	1062
BspLI	GGNNCC	3 cut(s)	694, 816, 1202
BspPI	GGATC	3 cut(s)	619, 1090, 1184
BspTI	CTTAAG	1 cut(s)	859
BsrDI	GCAATG	1 cut(s)	417
BsrFI	RCCGGY	3 cut(s)	128, 523, 884
BsrGI	TGTACA	1 cut(s)	674
BsrI	ACTGG	3 cut(s)	250, 665, 1084
BssAI	RCCGGY	3 cut(s)	128, 523, 884
BssECI	CCNNGG	7 cut(s)	12, 159, 177, 577, 750, 836, 1172
BssNI	GRCGYC	1 cut(s)	1146
BssT1I	CCWWGG	4 cut(s)	177, 577, 750, 1172
Bst2UI	CCWGG	3 cut(s)	160, 701, 838
Bst4CI	ACNGT	4 cut(s)	13, 448, 603, 880
Bst6I	CTCTTC	1 cut(s)	376
BstACI	GRCGYC	1 cut(s)	1146
BstAFI	CTTAAG	1 cut(s)	859
BstAUI	TGTACA	1 cut(s)	674
BstC8I	GCNNGC	9 cut(s)	54, 123, 198, 628, 866, 886, 965, 1110, 1114
BstDEI	CTNAG	4 cut(s)	490, 556, 772, 958
BstDSI	CCRYGG	2 cut(s)	12, 577
BstENI	CCTNNNNNAGG	1 cut(s)	920
BstF5I	GGATG	7 cut(s)	25, 413, 709, 977, 1103, 1107, 1127
BstFNI	CGCG	1 cut(s)	1062
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	70, 1062
BstMAI	GTCTC	1 cut(s)	1137
BstMWI	GCNNNNNNNGC	7 cut(s)	53, 131, 164, 173, 692, 701, 890
BstNI	CCWGG	3 cut(s)	160, 701, 838
BstSCI	CCNGG	4 cut(s)	47, 158, 699, 836
BstSFI	CTRYAG	1 cut(s)	1212
BstSLI	GKGCMC	1 cut(s)	8
BstUI	CGCG	1 cut(s)	1062
BstV1I	GCAGC	4 cut(s)	105, 146, 796, 1117
BstX2I	RGATCY	3 cut(s)	378, 654, 793
BstXI	CCANNNNNNTGG	1 cut(s)	159
BstYI	RGATCY	3 cut(s)	378, 654, 793
BsuI	GTATCC	2 cut(s)	576, 843
BsuRI	GGCC	3 cut(s)	576, 695, 884
BtgI	CCRYGG	2 cut(s)	12, 577
BtgZI	GCGATG	1 cut(s)	903
BtsCI	GGATG	7 cut(s)	25, 413, 709, 977, 1103, 1107, 1127
BtsI	GCAGTG	1 cut(s)	957
BtsIMutI	CAGTG	2 cut(s)	957, 1077
Cac8I	GCNNGC	9 cut(s)	54, 123, 198, 628, 866, 886, 965, 1110, 1114
CaiI	CAGNNNCTG	1 cut(s)	1118
CfoI	GCGC	2 cut(s)	70, 1062
Cfr10I	RCCGGY	3 cut(s)	128, 523, 884
Cfr13I	GGNCC	4 cut(s)	296, 526, 693, 754
CseI	GACGC	2 cut(s)	1051, 1154
Csp6I	GTAC	4 cut(s)	308, 675, 734, 1001
CspAI	ACCGGT	2 cut(s)	128, 523
CviAII	CATG	7 cut(s)	404, 433, 578, 746, 810, 895, 904
CviQI	GTAC	4 cut(s)	308, 675, 734, 1001
DdeI	CTNAG	4 cut(s)	490, 556, 772, 958
EaeI	YGGCCR	1 cut(s)	882
Eam1104I	CTCTTC	1 cut(s)	376
EarI	CTCTTC	1 cut(s)	376
Eco130I	CCWWGG	4 cut(s)	177, 577, 750, 1172
Eco24I	GRGCYC	2 cut(s)	817, 1203
Eco47I	GGWCC	3 cut(s)	296, 526, 754
Eco57I	CTGAAG	2 cut(s)	652, 842
Eco88I	CYCGRG	2 cut(s)	326, 584
EcoNI	CCTNNNNNAGG	1 cut(s)	920
EcoO109I	RGGNCCY	2 cut(s)	693, 754
EcoRII	CCWGG	3 cut(s)	158, 699, 836
EcoT14I	CCWWGG	4 cut(s)	177, 577, 750, 1172
EcoT38I	GRGCYC	2 cut(s)	817, 1203
ErhI	CCWWGG	4 cut(s)	177, 577, 750, 1172
Esp3I	CGTCTC	1 cut(s)	1137
FaeI	CATG	7 cut(s)	407, 436, 581, 749, 813, 898, 907
FalI	AAGNNNNNCTT	2 cut(s)	720, 752
FaqI	GGGAC	1 cut(s)	988
FatI	CATG	7 cut(s)	403, 432, 577, 745, 809, 894, 903
FbaI	TGATCA	1 cut(s)	1074
Fnu4HI	GCNGC	4 cut(s)	119, 135, 785, 1106
FokI	GGATG	7 cut(s)	32, 400, 696, 964, 1110, 1114, 1134
FriOI	GRGCYC	2 cut(s)	817, 1203
Fsp4HI	GCNGC	4 cut(s)	119, 135, 785, 1106
FspBI	CTAG	2 cut(s)	917, 1173
GlaI	GCGC	2 cut(s)	69, 1061
GluI	GCNGC	4 cut(s)	119, 135, 785, 1106
GsuI	CTGGAG	1 cut(s)	267
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	3 cut(s)	576, 695, 884
HapII	CCGG	8 cut(s)	48, 129, 313, 524, 683, 713, 885, 1204
HgaI	GACGC	2 cut(s)	1051, 1154
HhaI	GCGC	2 cut(s)	70, 1062
Hin1I	GRCGYC	1 cut(s)	1146
Hin1II	CATG	7 cut(s)	407, 436, 581, 749, 813, 898, 907
Hin6I	GCGC	2 cut(s)	68, 1060
HinP1I	GCGC	2 cut(s)	68, 1060
HindIII	AAGCTT	1 cut(s)	194
HinfI	GANTC	4 cut(s)	142, 513, 582, 742
HpaII	CCGG	8 cut(s)	48, 129, 313, 524, 683, 713, 885, 1204
HphI	GGTGA	4 cut(s)	37, 262, 296, 634
Hpy166II	GTNNAC	3 cut(s)	310, 430, 487
Hpy188I	TCNGA	4 cut(s)	112, 520, 775, 793
Hpy188III	TCNNGA	7 cut(s)	170, 257, 586, 713, 1095, 1119, 1138
Hpy8I	GTNNAC	3 cut(s)	310, 430, 487
Hpy99I	CGWCG	1 cut(s)	1067
HpyAV	CCTTC	5 cut(s)	107, 401, 615, 706, 1047
HpyCH4III	ACNGT	4 cut(s)	13, 448, 603, 880
HpyCH4IV	ACGT	2 cut(s)	594, 843
HpyCH4V	TGCA	8 cut(s)	134, 290, 598, 784, 898, 950, 1009, 1105
HpyF10VI	GCNNNNNNNGC	7 cut(s)	53, 131, 164, 173, 692, 701, 890
HpyF3I	CTNAG	4 cut(s)	490, 556, 772, 958
HpySE526I	ACGT	2 cut(s)	594, 843
Hsp92I	GRCGYC	1 cut(s)	1146
Hsp92II	CATG	7 cut(s)	407, 436, 581, 749, 813, 898, 907
HspAI	GCGC	2 cut(s)	68, 1060
Kpn2I	TCCGGA	1 cut(s)	712
KroI	GCCGGC	1 cut(s)	884
KroNI	GCCGGC	1 cut(s)	886
Ksp22I	TGATCA	1 cut(s)	1074
LmnI	GCTCC	2 cut(s)	820, 1206
Lsp1109I	GCAGC	4 cut(s)	105, 146, 796, 1117
LweI	GCATC	5 cut(s)	163, 277, 880, 937, 1092
MaeI	CTAG	2 cut(s)	917, 1173
MaeII	ACGT	2 cut(s)	594, 843
MaeIII	GTNAC	3 cut(s)	229, 476, 498
MboII	GAAGA	6 cut(s)	363, 601, 658, 728, 956, 1058
MflI	RGATCY	3 cut(s)	378, 654, 793
MhlI	GDGCHC	3 cut(s)	8, 817, 1203
MluCI	AATT	3 cut(s)	344, 1133, 1226
MlyI	GAGTC	3 cut(s)	136, 507, 576
MmeI	TCCRAC	2 cut(s)	81, 274
MnlI	CCTC	9 cut(s)	10, 29, 32, 220, 223, 322, 579, 650, 767
MroI	TCCGGA	1 cut(s)	712
MroNI	GCCGGC	1 cut(s)	884
MseI	TTAA	3 cut(s)	453, 806, 860
MslI	CAYNNNNRTG	3 cut(s)	11, 808, 878
MspA1I	CMGCKG	2 cut(s)	545, 820
MspCI	CTTAAG	1 cut(s)	859
MspI	CCGG	8 cut(s)	48, 129, 313, 524, 683, 713, 885, 1204
MspR9I	CCNGG	4 cut(s)	49, 160, 701, 838
Mva1269I	GAATGC	1 cut(s)	787
MvaI	CCWGG	3 cut(s)	160, 701, 838
MvnI	CGCG	1 cut(s)	1062
MwoI	GCNNNNNNNGC	7 cut(s)	53, 131, 164, 173, 692, 701, 890
NaeI	GCCGGC	1 cut(s)	886
NciI	CCSGG	1 cut(s)	49
NcoI	CCATGG	1 cut(s)	577
NgoMIV	GCCGGC	1 cut(s)	884
NlaIII	CATG	7 cut(s)	407, 436, 581, 749, 813, 898, 907
NlaIV	GGNNCC	3 cut(s)	694, 816, 1202
NmuCI	GTSAC	3 cut(s)	229, 476, 498
OliI	CACNNNNGTG	1 cut(s)	11
PaeR7I	CTCGAG	2 cut(s)	326, 584
PcsI	WCGNNNNNNNCGW	1 cut(s)	591
PctI	GAATGC	1 cut(s)	787
PdiI	GCCGGC	1 cut(s)	886
PfeI	GAWTC	1 cut(s)	742
PinAI	ACCGGT	2 cut(s)	128, 523
PkrI	GCNGC	4 cut(s)	120, 136, 786, 1107
PleI	GAGTC	3 cut(s)	136, 507, 576
PpsI	GAGTC	3 cut(s)	136, 507, 576
PpuMI	RGGWCCY	1 cut(s)	754
Psp5II	RGGWCCY	1 cut(s)	754
Psp6I	CCWGG	3 cut(s)	158, 699, 836
PspGI	CCWGG	3 cut(s)	158, 699, 836
PspN4I	GGNNCC	3 cut(s)	694, 816, 1202
PspPI	GGNCC	4 cut(s)	296, 526, 693, 754
PspPPI	RGGWCCY	1 cut(s)	754
PspXI	VCTCGAGB	1 cut(s)	326
PstNI	CAGNNNCTG	1 cut(s)	1118
PsuI	RGATCY	3 cut(s)	378, 654, 793
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	4 cut(s)	309, 676, 735, 1002
RsaNI	GTAC	4 cut(s)	308, 675, 734, 1001
RseI	CAYNNNNRTG	3 cut(s)	11, 808, 878
SaqAI	TTAA	3 cut(s)	453, 806, 860
SatI	GCNGC	4 cut(s)	119, 135, 785, 1106
Sau96I	GGNCC	4 cut(s)	296, 526, 693, 754
ScaI	AGTACT	2 cut(s)	735, 1002
SchI	GAGTC	3 cut(s)	136, 507, 576
ScrFI	CCNGG	4 cut(s)	49, 160, 701, 838
SduI	GDGCHC	3 cut(s)	8, 817, 1203
SfaNI	GCATC	5 cut(s)	163, 277, 880, 937, 1092
SfcI	CTRYAG	1 cut(s)	1212
Sfr274I	CTCGAG	2 cut(s)	326, 584
SgrAI	CRCCGGYG	1 cut(s)	128
SinI	GGWCC	3 cut(s)	296, 526, 754
SlaI	CTCGAG	2 cut(s)	326, 584
SmiMI	CAYNNNNRTG	3 cut(s)	11, 808, 878
SmlI	CTYRAG	7 cut(s)	218, 326, 570, 584, 737, 859, 1138
SmoI	CTYRAG	7 cut(s)	218, 326, 570, 584, 737, 859, 1138
Sse9I	AATT	3 cut(s)	344, 1133, 1226
SsiI	CCGC	3 cut(s)	62, 384, 818
SspMI	CTAG	2 cut(s)	917, 1173
StyD4I	CCNGG	4 cut(s)	47, 158, 699, 836
StyI	CCWWGG	4 cut(s)	177, 577, 750, 1172
TaaI	ACNGT	4 cut(s)	13, 448, 603, 880
TaiI	ACGT	2 cut(s)	597, 846
TaqI	TCGA	5 cut(s)	327, 390, 538, 585, 800
TaqII	GACCGA	1 cut(s)	313
TasI	AATT	3 cut(s)	344, 1133, 1226
TatI	WGTACW	4 cut(s)	307, 674, 733, 1000
TfiI	GAWTC	1 cut(s)	742
Tru1I	TTAA	3 cut(s)	453, 806, 860
Tru9I	TTAA	3 cut(s)	453, 806, 860
TscAI	CASTG	2 cut(s)	957, 1084
TseFI	GTSAC	3 cut(s)	229, 476, 498
TseI	GCWGC	4 cut(s)	118, 134, 784, 1105
Tsp45I	GTSAC	3 cut(s)	229, 476, 498
TspDTI	ATGAA	6 cut(s)	192, 344, 357, 402, 420, 1145
TspGWI	ACGGA	1 cut(s)	353
TspRI	CASTG	2 cut(s)	957, 1084
Vha464I	CTTAAG	1 cut(s)	859
VpaK11BI	GGWCC	3 cut(s)	296, 526, 754
XagI	CCTNNNNNAGG	1 cut(s)	920
XapI	RAATTY	2 cut(s)	1133, 1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	430
XhoI	CTCGAG	2 cut(s)	326, 584
XmaJI	CCTAGG	1 cut(s)	1172
XspI	CTAG	2 cut(s)	917, 1173
ZrmI	AGTACT	2 cut(s)	735, 1002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.